AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0329960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329960 MtrunA17_Chr2g0312131 98.733 868 11 0 1 868 1 868 0.0 1766
Msa0329960 MtrunA17_Chr8g0358191 68.894 868 249 11 4 867 1 851 0.0 1071
Msa0329960 MtrunA17_Chr2g0312151 63.509 855 247 15 21 868 17 813 0.0 991
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329960 AT1G79090.2 46.789 872 356 19 4 857 1 782 0.0 666
Msa0329960 AT1G79090.1 46.789 872 356 19 4 857 1 782 0.0 666
Msa0329960 AT1G79090.3 46.789 872 356 19 4 857 1 782 0.0 666
Msa0329960 AT4G14990.1 45.833 840 345 17 34 859 22 765 0.0 639
Msa0329960 AT3G22270.1 49.927 683 299 12 196 871 129 775 0.0 613
Msa0329960 AT3G22270.1 45.238 168 68 8 35 194 24 175 2.32e-28 122
Msa0329960 AT4G14990.2 45.860 785 316 16 89 859 1 690 0.0 592

Find 251 sgRNAs with CRISPR-Local

Find 678 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGTCATGTTCCTGTTTC+AGG 0.132478 2_4:+43902166 Msa0329960:CDS
AGATGGTGCTTCCCTTATTT+TGG 0.157861 2_4:+43910573 Msa0329960:CDS
CCAATAACACCTGGGTTTCT+TGG 0.199570 2_4:-43907667 None:intergenic
AACCTATATCTCTACTTTCT+AGG 0.218300 2_4:+43901847 Msa0329960:five_prime_UTR
GTGAAGGAAGTTCCTTTATT+TGG 0.234831 2_4:-43909859 None:intergenic
CTTGGTGGACCTCCTGGTTC+TGG 0.255118 2_4:+43902130 Msa0329960:CDS
ATGAACTGCTTTCACTCTTT+TGG 0.256404 2_4:-43909670 None:intergenic
GCCTCATTTGATGAATTCTT+TGG 0.257973 2_4:+43910682 Msa0329960:CDS
AAAGGTGGGGATTAAATAAA+TGG 0.261654 2_4:-43909544 None:intergenic
AGCAGCCTGCAACTATAATA+TGG 0.261879 2_4:+43910639 Msa0329960:CDS
CAAGAACAGATACCAAAATA+AGG 0.266560 2_4:-43910585 None:intergenic
CAGCGTTCTGTTCCCGTGAT+TGG 0.272702 2_4:+43910898 Msa0329960:CDS
TTAGCACATGGGGTTGGATT+TGG 0.283811 2_4:-43901902 None:intergenic
TCATGCAATACTTAGTAATA+AGG 0.284117 2_4:-43910705 None:intergenic
CCAAGAAACCCAGGTGTTAT+TGG 0.287071 2_4:+43907667 Msa0329960:CDS
AAAGCAGTTCATTACAATTT+CGG 0.293418 2_4:+43909681 Msa0329960:CDS
CGGCATTTAAGATTCTTATT+TGG 0.294157 2_4:+43910385 Msa0329960:CDS
AGGTTGTCTGCCAATGTATA+CGG 0.295191 2_4:+43910458 Msa0329960:CDS
TTCTGGAGATCTTAGGCAAT+TGG 0.299001 2_4:+43902147 Msa0329960:CDS
GCATCACAATATGCATTCTT+TGG 0.300944 2_4:+43903275 Msa0329960:CDS
TGAAGGAAGTTCCTTTATTT+GGG 0.308138 2_4:-43909858 None:intergenic
CTACCAGGGATGGAAGAATT+TGG 0.312227 2_4:-43909989 None:intergenic
GCCGGGTGGTCGATCTCAAC+AGG 0.318303 2_4:+43909130 Msa0329960:CDS
TGATCCTCATGCATTTCTTC+AGG 0.318498 2_4:+43909898 Msa0329960:CDS
ATGGTGGATATGGATGGTTT+TGG 0.320645 2_4:+43902094 Msa0329960:CDS
ACCCTCCCAACTCGACTTCC+TGG 0.325057 2_4:-43903310 None:intergenic
CGCCCTGTTGGAAGCACTGC+TGG 0.336023 2_4:+43910550 Msa0329960:CDS
GAAGACTTCTGTACCAATAT+TGG 0.339254 2_4:-43909089 None:intergenic
AGACATAAATCAACTCAAAA+AGG 0.342250 2_4:+43909602 Msa0329960:CDS
TGCTCTTGCCTTAGCTGCTC+AGG 0.346127 2_4:-43908861 None:intergenic
GTTATAGAAGAAACGTTAAT+AGG 0.348594 2_4:-43901954 None:intergenic
GGTGATCTTGGTGGACCTCC+TGG 0.352995 2_4:+43902124 Msa0329960:CDS
ACGATCTTACAACCACCTTT+TGG 0.353378 2_4:+43903583 Msa0329960:CDS
ACTGCTTTACTCACTTTCTC+TGG 0.362656 2_4:-43907701 None:intergenic
ACTCAACTGTAGCGCAGAAT+TGG 0.363263 2_4:-43909249 None:intergenic
TATCTTCAATTGCTTCTTCC+TGG 0.363691 2_4:+43910325 Msa0329960:CDS
ATTACCCATATTATAGTTGC+AGG 0.364811 2_4:-43910644 None:intergenic
TCTCCAGCAGTGCTTCCAAC+AGG 0.371729 2_4:-43910553 None:intergenic
GCAAGGAGCTTGCGTCCCTT+AGG 0.374702 2_4:-43910298 None:intergenic
ACCCTGCTTGGTTGACCAAT+TGG 0.375153 2_4:-43909355 None:intergenic
TAGTCATCGTTTATCACATC+AGG 0.375229 2_4:+43909631 Msa0329960:CDS
TAGCCTGCAGATTGCTGAAC+AGG 0.386467 2_4:-43909503 None:intergenic
GCTGCTGCTCCAGTGTGATA+TGG 0.388425 2_4:-43909188 None:intergenic
TTTCTGCCCAACCCAAATAA+AGG 0.389774 2_4:+43909847 Msa0329960:CDS
ACTAGCTACTTCACTTCAAC+TGG 0.395783 2_4:+43910195 Msa0329960:CDS
ACGAAGAAGGCAGGTCCTAT+TGG 0.395900 2_4:+43910168 Msa0329960:CDS
ACTTCAACTGGTTGACCCGC+TGG 0.396374 2_4:+43910207 Msa0329960:CDS
AGGAGGTTGGACCGATCTCC+TGG 0.398000 2_4:-43909383 None:intergenic
CATGTAGTCACTGCAGCTGC+TGG 0.399596 2_4:-43910424 None:intergenic
ATATGGGTAATCGTTCCTTT+TGG 0.408815 2_4:+43910656 Msa0329960:CDS
AAAGAGACGATGTTCATAAC+TGG 0.409081 2_4:+43908718 Msa0329960:CDS
AAATGCATGAGGATCATTAC+TGG 0.409536 2_4:-43909891 None:intergenic
CCACCAAAGGAAGTTATTGC+TGG 0.410035 2_4:+43910867 Msa0329960:CDS
GATAGTGAAGGTTCAATTGA+TGG 0.416315 2_4:+43908759 Msa0329960:CDS
CAAGGTTGGGCTTGCAGCTA+AGG 0.417819 2_4:+43910243 Msa0329960:CDS
TTTCTTCAGGTTGATTCCCT+AGG 0.418382 2_4:+43909911 Msa0329960:CDS
TTCATCACTTGTCATATGCT+TGG 0.419448 2_4:-43909705 None:intergenic
ACCCTAGAAAGTAGAGATAT+AGG 0.419474 2_4:-43901849 None:intergenic
TAGACTCAAAAGTTGGCAAA+TGG 0.420140 2_4:-43903346 None:intergenic
CATTTAAGATTCTTATTTGG+TGG 0.421443 2_4:+43910388 Msa0329960:CDS
ACCTATATCTCTACTTTCTA+GGG 0.422926 2_4:+43901848 Msa0329960:five_prime_UTR
AATCCAGCAATAACTTCCTT+TGG 0.424237 2_4:-43910870 None:intergenic
ACAAACAACTGCAGCAAGAC+AGG 0.425389 2_4:-43910506 None:intergenic
CAATCTGCAGGCTACTTGTC+AGG 0.426282 2_4:+43909512 Msa0329960:CDS
GAAGTTCCTTTATTTGGGTT+GGG 0.427218 2_4:-43909853 None:intergenic
CAACAACTACAGCTTCATAA+TGG 0.434498 2_4:+43909422 Msa0329960:CDS
ATTGGATTTAACAGTAATGC+TGG 0.437304 2_4:+43910916 Msa0329960:CDS
GGAAGTTCCTTTATTTGGGT+TGG 0.444412 2_4:-43909854 None:intergenic
CTTGCACGCAAGAGTTCAAC+AGG 0.445560 2_4:-43910826 None:intergenic
GATCCAATGTCATCCACATT+TGG 0.449177 2_4:-43910772 None:intergenic
TTTCACTTCTTATCCTCCGC+CGG 0.449353 2_4:+43909112 Msa0329960:CDS
GTAAGCTCCTGTTGTTTGTC+GGG 0.449579 2_4:-43909050 None:intergenic
TTCAGAGAAGCCTCTAGAAC+AGG 0.453266 2_4:+43910027 Msa0329960:CDS
CTCCTGGTTCTGGAGATCTT+AGG 0.453773 2_4:+43902140 Msa0329960:CDS
CAAGGAGCTTGCGTCCCTTA+GGG 0.453938 2_4:-43910297 None:intergenic
AGTTGAGTGGATTAAACCTT+GGG 0.454503 2_4:+43909264 Msa0329960:CDS
AAGAACAGATACCAAAATAA+GGG 0.457924 2_4:-43910584 None:intergenic
TGTATACGGGGAATGGATCT+TGG 0.460378 2_4:+43910472 Msa0329960:CDS
TTGCATCAGAAACCTGAAAC+AGG 0.461055 2_4:-43902178 None:intergenic
AACCAATTGGTCAACCAAGC+AGG 0.461811 2_4:+43909353 Msa0329960:CDS
CTAGTGAGCCAGTTCACAAC+TGG 0.463433 2_4:+43908907 Msa0329960:CDS
TCTGGAGATCTTAGGCAATT+GGG 0.465106 2_4:+43902148 Msa0329960:CDS
GAAAGGGGAAGATCTGTGAT+AGG 0.466355 2_4:-43901928 None:intergenic
TTCATATCCCGACAAACAAC+AGG 0.473230 2_4:+43909043 Msa0329960:CDS
AACCTTGGGTCACACTTTGG+TGG 0.473373 2_4:+43909278 Msa0329960:CDS
CTGGCTCACTAGAGCAATGT+TGG 0.473437 2_4:-43908896 None:intergenic
CTTTGGTAAAGATGCTGTCC+AGG 0.474602 2_4:+43903292 Msa0329960:CDS
TTAAACCTTGGGTCACACTT+TGG 0.475159 2_4:+43909275 Msa0329960:CDS
TTCTGTATTCGTTGACTAAG+AGG 0.475936 2_4:-43909332 None:intergenic
TTCTTCAGGTTGATTCCCTA+GGG 0.477004 2_4:+43909912 Msa0329960:CDS
TAGTTTGCATGACCGTCCTT+CGG 0.479765 2_4:+43910365 Msa0329960:CDS
CTTATTTGGTGGTCTCCCCT+CGG 0.481040 2_4:+43910399 Msa0329960:CDS
CTTCAACTGGTTGACCCGCT+GGG 0.483607 2_4:+43910208 Msa0329960:CDS
GAAACGTTAATAGGAAGGAA+AGG 0.485371 2_4:-43901945 None:intergenic
AGTAAGCTCCTGTTGTTTGT+CGG 0.486049 2_4:-43909051 None:intergenic
TTCACTTCTTATCCTCCGCC+GGG 0.486593 2_4:+43909113 Msa0329960:CDS
CTGCCAATGTATACGGGGAA+TGG 0.488356 2_4:+43910465 Msa0329960:CDS
AAGTAGCTAGTCCTTCCAAT+AGG 0.488398 2_4:-43910183 None:intergenic
GTAAATGGGCAAGAGAAGAC+TGG 0.491821 2_4:-43908803 None:intergenic
TCCAGATTCTACATCTGATC+TGG 0.493925 2_4:+43908692 Msa0329960:intron
TGCTGCTAAAGCAATTAGTA+AGG 0.494076 2_4:+43910798 Msa0329960:CDS
AGACTCAAAAGTTGGCAAAT+GGG 0.495998 2_4:-43903345 None:intergenic
CCAGCAATAACTTCCTTTGG+TGG 0.496773 2_4:-43910867 None:intergenic
TCTCCAAATTCTTCCATCCC+TGG 0.497208 2_4:+43909986 Msa0329960:CDS
TTTGGTATCTGTTCTTGAGA+GGG 0.497468 2_4:+43910591 Msa0329960:CDS
ACTGCAGCTGCTGGATCCGA+GGG 0.497845 2_4:-43910415 None:intergenic
TTTATTTGGGTTGGGCAGAA+AGG 0.497854 2_4:-43909845 None:intergenic
GCAGCCTGCAACTATAATAT+GGG 0.498589 2_4:+43910640 Msa0329960:CDS
TCAGGTTGATTCCCTAGGGA+GGG 0.499269 2_4:+43909916 Msa0329960:CDS
CTTCATATCCTGAGCAGCTA+AGG 0.502424 2_4:+43908853 Msa0329960:CDS
TGGTAATAGTCATCTATGTA+TGG 0.502833 2_4:-43909776 None:intergenic
GGTTGTCTGCCAATGTATAC+GGG 0.505882 2_4:+43910459 Msa0329960:CDS
GTTGGAAGCACTGCTGGAGA+TGG 0.505988 2_4:+43910556 Msa0329960:CDS
GCTGTCCAGGAAGTCGAGTT+GGG 0.505992 2_4:+43903305 Msa0329960:CDS
ATCAAATGAGGCCTGCCAAA+AGG 0.507360 2_4:-43910671 None:intergenic
AATTGTGTTCCACCATCTTG+TGG 0.510161 2_4:-43910142 None:intergenic
CCACGTTCACCAATAACACC+TGG 0.510228 2_4:-43907676 None:intergenic
AAGGATAGTATCTGTCCCTA+AGG 0.510426 2_4:+43910282 Msa0329960:CDS
TTATAGTTGCAGGCTGCTTG+TGG 0.511165 2_4:-43910634 None:intergenic
AAACGTTAATAGGAAGGAAA+GGG 0.512191 2_4:-43901944 None:intergenic
CATCCTGTTCAGCAATCTGC+AGG 0.513845 2_4:+43909500 Msa0329960:CDS
GTGATCATACTTGCTATTGA+CGG 0.514794 2_4:-43909579 None:intergenic
ACCGTCCTCAATTGTGACTC+TGG 0.515769 2_4:-43910065 None:intergenic
TGCTGTCCAGGAAGTCGAGT+TGG 0.516212 2_4:+43903304 Msa0329960:CDS
AAGGTGGGGATTAAATAAAT+GGG 0.518012 2_4:-43909543 None:intergenic
CATCCTCCTCTACGCCCTGT+TGG 0.518364 2_4:+43910538 Msa0329960:CDS
AGGAATTTAGCACATGGGGT+TGG 0.518740 2_4:-43901908 None:intergenic
GTTGCTGCAGCATATTACTA+AGG 0.519246 2_4:-43909403 None:intergenic
TCAACGAATACAGAACCAAT+TGG 0.519596 2_4:+43909340 Msa0329960:CDS
AACCAAGCAGGGTTATATCC+AGG 0.519950 2_4:+43909365 Msa0329960:CDS
TAGAAGAAACGTTAATAGGA+AGG 0.521888 2_4:-43901950 None:intergenic
GTGACTCTGGCAGCAAATGT+AGG 0.523060 2_4:-43910052 None:intergenic
CCCTGTTGAGATCGACCACC+CGG 0.523910 2_4:-43909131 None:intergenic
TCATGCAAACTATCCGCATA+AGG 0.523978 2_4:-43910354 None:intergenic
TCTGTATTCGTTGACTAAGA+GGG 0.525367 2_4:-43909331 None:intergenic
CACTGGAGCAGCAGCTCAGT+TGG 0.526269 2_4:+43909196 Msa0329960:CDS
CTTGTGGCTGATTAGACTGT+AGG 0.526747 2_4:-43910126 None:intergenic
ATCTTTAAATCAGAGCTACC+AGG 0.529960 2_4:-43910004 None:intergenic
ACGAAAATGAAACCCTCCCT+AGG 0.531200 2_4:-43909928 None:intergenic
TCCTCATTAGACTCAAAAGT+TGG 0.531442 2_4:-43903353 None:intergenic
TTGTGGATCGGTTAGAAGCT+CGG 0.532013 2_4:-43910617 None:intergenic
TGATCAAGCCAGTTGTGAAC+TGG 0.534986 2_4:-43908915 None:intergenic
GCCAAAGAATTCATCAAATG+AGG 0.536456 2_4:-43910683 None:intergenic
TATACAAAATGCACCAAATG+TGG 0.537033 2_4:+43910759 Msa0329960:CDS
CAACATCCTTACCTTCCAAA+AGG 0.537944 2_4:-43903598 None:intergenic
CAGCATATTACTAAGGAGGT+TGG 0.537947 2_4:-43909396 None:intergenic
TTGGATTTAACAGTAATGCT+GGG 0.538008 2_4:+43910917 Msa0329960:CDS
GGATGAGCTAGGAGAAAGGT+GGG 0.538219 2_4:-43909558 None:intergenic
CACTGCAGCTGCTGGATCCG+AGG 0.538390 2_4:-43910416 None:intergenic
CTCCTGGATATAACCCTGCT+TGG 0.542193 2_4:-43909367 None:intergenic
TCGGCCTCGCCCTCTTCTTG+AGG 0.542370 2_4:+43909958 Msa0329960:CDS
TTTGGTGGTCATCAGTGTGA+GGG 0.543502 2_4:-43910852 None:intergenic
AATTCTGCGCTACAGTTGAG+TGG 0.543938 2_4:+43909251 Msa0329960:CDS
TTCAGGTTGATTCCCTAGGG+AGG 0.544020 2_4:+43909915 Msa0329960:CDS
TGCTGCCAGAGTCACAATTG+AGG 0.547539 2_4:+43910060 Msa0329960:CDS
CACTAGAGCAATGTTGGAGG+TGG 0.548928 2_4:-43908890 None:intergenic
CTTTGGTGGTCATCAGTGTG+AGG 0.549538 2_4:-43910853 None:intergenic
GGGGATTAAATAAATGGGAC+TGG 0.549761 2_4:-43909538 None:intergenic
CAGTTGAGTGGATTAAACCT+TGG 0.552867 2_4:+43909263 Msa0329960:CDS
GGTGGTCATCAGTGTGAGGG+AGG 0.557507 2_4:-43910849 None:intergenic
TAAATCAGAGCTACCAGGGA+TGG 0.558565 2_4:-43909999 None:intergenic
GTTGCAGGCTGCTTGTGGAT+CGG 0.560942 2_4:-43910629 None:intergenic
AACACACGACAATATCCTAC+TGG 0.561844 2_4:+43909302 Msa0329960:CDS
ATTACTGTTAAATCCAATCA+CGG 0.565239 2_4:-43910911 None:intergenic
TAAATGGGCAAGAGAAGACT+GGG 0.566055 2_4:-43908802 None:intergenic
TGCCTAAGATCTCCAGAACC+AGG 0.566176 2_4:-43902142 None:intergenic
TTCCTGGTAGTGACCTTATG+CGG 0.567547 2_4:+43910341 Msa0329960:CDS
ACAATTAAGACGAAGAAGGC+AGG 0.569275 2_4:+43910159 Msa0329960:CDS
TCAGCCTCAAGAAGAGGGCG+AGG 0.570999 2_4:-43909962 None:intergenic
TCCAGGAAGTCGAGTTGGGA+GGG 0.571151 2_4:+43903309 Msa0329960:CDS
GTCCAGGAAGTCGAGTTGGG+AGG 0.571213 2_4:+43903308 Msa0329960:CDS
AAGTGGCCTGTACTATGACT+TGG 0.575535 2_4:-43909158 None:intergenic
TGAGATCGACCACCCGGCGG+AGG 0.575667 2_4:-43909125 None:intergenic
ATATGAAGATGTTCTGTACA+AGG 0.577232 2_4:-43909027 None:intergenic
ACCAATTGGTCAACCAAGCA+GGG 0.577462 2_4:+43909354 Msa0329960:CDS
TTGCTATTGACGGATGAGCT+AGG 0.577997 2_4:-43909569 None:intergenic
CAGTCTAATCAGCCACAAGA+TGG 0.578208 2_4:+43910130 Msa0329960:CDS
TAGTTGAACAAGGCTGTCAG+TGG 0.579597 2_4:+43907643 Msa0329960:intron
GCACCAAATGTGGATGACAT+TGG 0.580947 2_4:+43910769 Msa0329960:CDS
CCAGGTGTTATTGGTGAACG+TGG 0.581152 2_4:+43907676 Msa0329960:CDS
GCTCACTAGAGCAATGTTGG+AGG 0.581610 2_4:-43908893 None:intergenic
AACGTTAATAGGAAGGAAAG+GGG 0.581790 2_4:-43901943 None:intergenic
CGAAAATGAAACCCTCCCTA+GGG 0.584674 2_4:-43909927 None:intergenic
GAACACAATTAAGACGAAGA+AGG 0.590498 2_4:+43910155 Msa0329960:CDS
GGTTCTCCAAGTCATAGTAC+AGG 0.591619 2_4:+43909152 Msa0329960:CDS
GAGAATCAGCCTCAAGAAGA+GGG 0.592961 2_4:-43909967 None:intergenic
TGACGGATGAGCTAGGAGAA+AGG 0.593268 2_4:-43909562 None:intergenic
GATCCATTCCCCGTATACAT+TGG 0.595501 2_4:-43910468 None:intergenic
CAGGGTTATATCCAGGAGAT+CGG 0.595838 2_4:+43909372 Msa0329960:CDS
ATAAGAATCTTAAATGCCGA+AGG 0.597513 2_4:-43910381 None:intergenic
CTCCAGCAGTGCTTCCAACA+GGG 0.598165 2_4:-43910552 None:intergenic
CGGATGAGCTAGGAGAAAGG+TGG 0.598260 2_4:-43909559 None:intergenic
AGAAGGCAGGTCCTATTGGA+AGG 0.601061 2_4:+43910172 Msa0329960:CDS
TGATTCGTGCAAGTGTGGAA+TGG 0.603595 2_4:-43909000 None:intergenic
ATATGAAGATGTTCTGTACA+AGG 0.605692 2_4:-43908838 None:intergenic
TGGATTTAACAGTAATGCTG+GGG 0.606235 2_4:+43910918 Msa0329960:CDS
GGTGTTGATTCGTGCAAGTG+TGG 0.608028 2_4:-43909005 None:intergenic
TTCCACCAAAGTGTGACCCA+AGG 0.608336 2_4:-43909280 None:intergenic
CTGTATTCGTTGACTAAGAG+GGG 0.609537 2_4:-43909330 None:intergenic
GTGCTTCCAACAGGGCGTAG+AGG 0.609942 2_4:-43910544 None:intergenic
CTTCCAACAGGGCGTAGAGG+AGG 0.610367 2_4:-43910541 None:intergenic
GGAGAATCAGCCTCAAGAAG+AGG 0.611695 2_4:-43909968 None:intergenic
GTCAGTGGACCAAGAAACCC+AGG 0.612755 2_4:+43907658 Msa0329960:CDS
CTCACACTGATGACCACCAA+AGG 0.614858 2_4:+43910854 Msa0329960:CDS
ATCCGCATAAGGTCACTACC+AGG 0.615411 2_4:-43910343 None:intergenic
TGATAGGAATTTAGCACATG+GGG 0.615865 2_4:-43901912 None:intergenic
AATGTAGGCTCCTGTTCTAG+AGG 0.616073 2_4:-43910037 None:intergenic
GTGATAGGAATTTAGCACAT+GGG 0.616172 2_4:-43901913 None:intergenic
GAATCTTAAATGCCGAAGGA+CGG 0.616530 2_4:-43910377 None:intergenic
TTCAACTGGTTGACCCGCTG+GGG 0.620687 2_4:+43910209 Msa0329960:CDS
GCTGCAGCATATTACTAAGG+AGG 0.621104 2_4:-43909400 None:intergenic
CATCCTTACCTTCCAAAAGG+TGG 0.621852 2_4:-43903595 None:intergenic
CAGAATGCGTATGATAGTGA+AGG 0.623436 2_4:+43908747 Msa0329960:CDS
TGGGGTTGGATTTGGATCAG+AGG 0.626210 2_4:-43901894 None:intergenic
CGAGTTGGGAGGGTTAGAAG+AGG 0.630131 2_4:+43903319 Msa0329960:CDS
AGGATAGTATCTGTCCCTAA+GGG 0.631077 2_4:+43910283 Msa0329960:CDS
AGTCATCGTTTATCACATCA+GGG 0.632224 2_4:+43909632 Msa0329960:CDS
GCCAGAGTCACAATTGAGGA+CGG 0.634189 2_4:+43910064 Msa0329960:CDS
CACGTTCACCAATAACACCT+GGG 0.634807 2_4:-43907675 None:intergenic
TTACTGTTAAATCCAATCAC+GGG 0.636315 2_4:-43910910 None:intergenic
TCTAATCAGCCACAAGATGG+TGG 0.638420 2_4:+43910133 Msa0329960:CDS
CCGGGTGGTCGATCTCAACA+GGG 0.647254 2_4:+43909131 Msa0329960:CDS
GACTACATGCAACCTTGCCG+AGG 0.648938 2_4:+43910438 Msa0329960:CDS
GCAATTGAAGATACTTCGCA+AGG 0.650941 2_4:-43910315 None:intergenic
TCAACCTGAAGAAATGCATG+AGG 0.652261 2_4:-43909902 None:intergenic
TGCAATTGAGTCATCAAGTG+AGG 0.653732 2_4:-43909455 None:intergenic
AGCGCAGAATTGGAGAAATG+TGG 0.654529 2_4:-43909239 None:intergenic
ATACTATCCTTATGAAAACA+AGG 0.654648 2_4:-43910270 None:intergenic
ACTTCTTATCCTCCGCCGGG+TGG 0.654695 2_4:+43909116 Msa0329960:CDS
TGTGATAGGAATTTAGCACA+TGG 0.657917 2_4:-43901914 None:intergenic
ATTGGCAGACAACCTCGGCA+AGG 0.658718 2_4:-43910450 None:intergenic
TATACATTGGCAGACAACCT+CGG 0.660598 2_4:-43910455 None:intergenic
TTACTGGAACGTGTTCGTGA+AGG 0.662370 2_4:-43909875 None:intergenic
TATGAAGATGTTCTGTACAA+GGG 0.667003 2_4:-43909026 None:intergenic
GGAGGGACTGCATGATGCTG+TGG 0.671070 2_4:-43910735 None:intergenic
CTAAGAGGGGAGGAACCAGT+AGG 0.676397 2_4:-43909317 None:intergenic
TCTTTAAATCAGAGCTACCA+GGG 0.677000 2_4:-43910003 None:intergenic
GGATTTAACAGTAATGCTGG+GGG 0.677670 2_4:+43910919 Msa0329960:CDS
TTGAACATTCCATATCACAC+TGG 0.678952 2_4:+43909179 Msa0329960:CDS
TTCGTGCAAGTGTGGAATGG+AGG 0.692522 2_4:-43908997 None:intergenic
TATTCGTTGACTAAGAGGGG+AGG 0.698688 2_4:-43909327 None:intergenic
CTGCAGCTGCTGGATCCGAG+GGG 0.699120 2_4:-43910414 None:intergenic
TGTGATATGGAATGTTCAAG+TGG 0.701817 2_4:-43909175 None:intergenic
CAGCTCATGATGACAAACGA+TGG 0.714656 2_4:+43908958 Msa0329960:CDS
GATGAGCTAGGAGAAAGGTG+GGG 0.715172 2_4:-43909557 None:intergenic
GTTGTCTGCCAATGTATACG+GGG 0.721058 2_4:+43910460 Msa0329960:CDS
AAGTGTGGAATGGAGGTATG+CGG 0.728702 2_4:-43908990 None:intergenic
ATAGATGACTATTACCACCA+AGG 0.739114 2_4:+43909782 Msa0329960:CDS
CTAAGATCTCCAGAACCAGG+AGG 0.756897 2_4:-43902139 None:intergenic
TGTTGAGATCGACCACCCGG+CGG 0.777403 2_4:-43909128 None:intergenic
AAATGGGCAAGAGAAGACTG+GGG 0.800097 2_4:-43908801 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTTTTTTTTTTT+TGG + chr2_4:43903105-43903124 Msa0329960:intron 0.0%
!!! TATTTTTTTTTTTTTTTTTT+GGG + chr2_4:43903106-43903125 Msa0329960:intron 0.0%
!!! TTTTAATTCTTTTGTTTAAT+TGG + chr2_4:43902204-43902223 Msa0329960:intron 10.0%
!!! TTATTTAATTTGAGTTTTTT+TGG + chr2_4:43902287-43902306 Msa0329960:intron 10.0%
!! TATTATTATTATTCAATTGT+TGG - chr2_4:43905286-43905305 None:intergenic 10.0%
!! TAATAAAAGAAAAAGAAAAT+TGG - chr2_4:43907740-43907759 None:intergenic 10.0%
!! AAAGTTATTATCTATTTCAT+AGG + chr2_4:43903030-43903049 Msa0329960:intron 15.0%
!! AGATAAAATTATTATCTATG+TGG + chr2_4:43903069-43903088 Msa0329960:intron 15.0%
!!! TTTTTTTTTTTTTTTGGGTT+TGG + chr2_4:43903111-43903130 Msa0329960:intron 15.0%
!!! TTTAAGTAATTCTAAGAATT+TGG + chr2_4:43903202-43903221 Msa0329960:intron 15.0%
!! AATTGAACAGTTAAAAATTT+GGG + chr2_4:43904636-43904655 Msa0329960:intron 15.0%
!! AAAAACATCATAAAAAAACA+CGG + chr2_4:43904985-43905004 Msa0329960:intron 15.0%
!! TATAAATTTAGATTATCCTT+AGG + chr2_4:43905459-43905478 Msa0329960:intron 15.0%
!! TAAATGTAAATATTCAAAAG+CGG + chr2_4:43905853-43905872 Msa0329960:intron 15.0%
!!! TATGTTATTTATAAAGTGAT+TGG + chr2_4:43906042-43906061 Msa0329960:intron 15.0%
!!! ATTTGTATTTTTATTTGATG+TGG - chr2_4:43906708-43906727 None:intergenic 15.0%
!! ACATCAAATAAAAATACAAA+TGG + chr2_4:43906707-43906726 Msa0329960:intron 15.0%
!! TGATTATAAATAAAAAAGTG+TGG + chr2_4:43906917-43906936 Msa0329960:intron 15.0%
!!! GATTATAAATAAAAAAGTGT+GGG + chr2_4:43906918-43906937 Msa0329960:intron 15.0%
!! CAAACATATTTGAATATTAT+TGG + chr2_4:43907193-43907212 Msa0329960:intron 15.0%
!! AAAAAAACTTAGTATTCATA+TGG - chr2_4:43907425-43907444 None:intergenic 15.0%
!! AAAAAAACTTAGTATTCATA+TGG - chr2_4:43907425-43907444 None:intergenic 15.0%
!! AAATAAATTATGTCAAATTC+TGG + chr2_4:43907760-43907779 Msa0329960:intron 15.0%
!! AAATATAAGTTAGAAATCTT+AGG - chr2_4:43908209-43908228 None:intergenic 15.0%
!!! TTGAGTTTTTTTGGTATAAT+TGG + chr2_4:43902296-43902315 Msa0329960:intron 20.0%
!! TCATTAATCAGTCATAAATA+AGG - chr2_4:43902747-43902766 None:intergenic 20.0%
!! CTTACTCTTATGTATAATTT+AGG + chr2_4:43902829-43902848 Msa0329960:intron 20.0%
!! AATTTAGAAGATATTGTTGT+GGG - chr2_4:43902951-43902970 None:intergenic 20.0%
!! AAATTTAGAAGATATTGTTG+TGG - chr2_4:43902952-43902971 None:intergenic 20.0%
!! AAAAATCAATAATAGACCAA+TGG - chr2_4:43903004-43903023 None:intergenic 20.0%
!!! TTACTTAAAATGAAAAGTAC+AGG - chr2_4:43903191-43903210 None:intergenic 20.0%
!! AAACATTACATCAATCATAT+AGG - chr2_4:43903777-43903796 None:intergenic 20.0%
!!! AACAAATGAATTTGAAATCA+TGG - chr2_4:43903980-43903999 None:intergenic 20.0%
!! CAATTGAACAGTTAAAAATT+TGG + chr2_4:43904635-43904654 Msa0329960:intron 20.0%
!! AATATTACTATTTAGTTGCT+AGG + chr2_4:43904662-43904681 Msa0329960:intron 20.0%
!! GTTTGATATTTATGTAGATT+GGG - chr2_4:43904963-43904982 None:intergenic 20.0%
!! AGTTTGATATTTATGTAGAT+TGG - chr2_4:43904964-43904983 None:intergenic 20.0%
!! AAAACATCATAAAAAAACAC+GGG + chr2_4:43904986-43905005 Msa0329960:intron 20.0%
!!! ATAAGCAAAGATTCATTTTA+AGG + chr2_4:43905134-43905153 Msa0329960:intron 20.0%
!! ATAATATAGACCAAATACAT+CGG - chr2_4:43905172-43905191 None:intergenic 20.0%
!! CATTGAATAAATGATATATC+TGG - chr2_4:43905198-43905217 None:intergenic 20.0%
!!! AAGCAAAAAAATCACTTTTA+AGG - chr2_4:43905223-43905242 None:intergenic 20.0%
!!! CTTTTTTTATGAAAAAGACA+GGG - chr2_4:43905727-43905746 None:intergenic 20.0%
!! TTTATATTCTTGTCTTACAT+TGG + chr2_4:43905986-43906005 Msa0329960:intron 20.0%
!! ATAACATAATAGCATAAAAC+AGG - chr2_4:43906030-43906049 None:intergenic 20.0%
!! CAAAACTTCATGAAAAATAT+TGG - chr2_4:43906102-43906121 None:intergenic 20.0%
!!! ATATTTTTCATGAAGTTTTG+CGG + chr2_4:43906102-43906121 Msa0329960:intron 20.0%
!!! AAGGACTTGTTTTTTTTTTT+GGG - chr2_4:43906225-43906244 None:intergenic 20.0%
!!! TAAGGACTTGTTTTTTTTTT+TGG - chr2_4:43906226-43906245 None:intergenic 20.0%
!!! TAAATCAGTTTTTTATTCTG+CGG - chr2_4:43906548-43906567 None:intergenic 20.0%
!! TTTCTTTATCTTCTCAATTT+GGG - chr2_4:43906656-43906675 None:intergenic 20.0%
!! ATTTCTTTATCTTCTCAATT+TGG - chr2_4:43906657-43906676 None:intergenic 20.0%
!!! TGCGTAATTTTTTTTATCTT+TGG + chr2_4:43906953-43906972 Msa0329960:intron 20.0%
!! ACCTATAAAAGAAAAACAAA+AGG + chr2_4:43907111-43907130 Msa0329960:intron 20.0%
!!! TCCTTTTGTTTTTCTTTTAT+AGG - chr2_4:43907115-43907134 None:intergenic 20.0%
!! AAATATCAAACAACTAACTT+TGG - chr2_4:43907246-43907265 None:intergenic 20.0%
!! AAATATCAAACAACTAACTT+TGG - chr2_4:43907246-43907265 None:intergenic 20.0%
!!! AATTTGATTTTAGTTGAACA+AGG + chr2_4:43907633-43907652 Msa0329960:intron 20.0%
!!! ATTTAATATTTTGAGTGAAC+AGG + chr2_4:43907801-43907820 Msa0329960:intron 20.0%
!!! TTAAATTCATGCATTGATAT+GGG + chr2_4:43908014-43908033 Msa0329960:intron 20.0%
!! TAACCTCATCTTAAAATATT+CGG - chr2_4:43908536-43908555 None:intergenic 20.0%
! GTTATAGAAGAAACGTTAAT+AGG - chr2_4:43901957-43901976 None:intergenic 25.0%
! GAAAAAAGATTGAAACTTTG+AGG - chr2_4:43901983-43902002 None:intergenic 25.0%
!!! TTTGTGTTGTTTAATTCATC+TGG + chr2_4:43902235-43902254 Msa0329960:intron 25.0%
!!! TTGTGTTGTTTAATTCATCT+GGG + chr2_4:43902236-43902255 Msa0329960:intron 25.0%
!! GAATTATTGTTGTGATGTTT+TGG + chr2_4:43902434-43902453 Msa0329960:intron 25.0%
! TAAACATTTGTATGTCTGTT+TGG - chr2_4:43902686-43902705 None:intergenic 25.0%
!!! TTTTTTTTTTTTGGGTTTGG+TGG + chr2_4:43903114-43903133 Msa0329960:intron 25.0%
!!! TTTTTTTTTTTGGGTTTGGT+GGG + chr2_4:43903115-43903134 Msa0329960:intron 25.0%
!!! GTTCTTTTTTAATAGAGAAC+AGG + chr2_4:43903379-43903398 Msa0329960:CDS 25.0%
!! GAATTTGAAATCATGGAAAA+CGG - chr2_4:43903973-43903992 None:intergenic 25.0%
!! TCTAGAACACTTAATATGAT+AGG - chr2_4:43904400-43904419 None:intergenic 25.0%
!! ACTATTGTCTAGTTTGAATA+TGG - chr2_4:43904444-43904463 None:intergenic 25.0%
! ATTCAAACTAGACAATAGTA+AGG + chr2_4:43904445-43904464 Msa0329960:intron 25.0%
! AGAAAACAATATACTGATCT+AGG + chr2_4:43904592-43904611 Msa0329960:intron 25.0%
! TTAACGGAGAAGATAAAATT+TGG + chr2_4:43904927-43904946 Msa0329960:intron 25.0%
! TAACGGAGAAGATAAAATTT+GGG + chr2_4:43904928-43904947 Msa0329960:intron 25.0%
!!! TTTTTGCTTTAAATAGTGAC+CGG + chr2_4:43905234-43905253 Msa0329960:intron 25.0%
! TTACTAAATAATACTTCCTC+CGG - chr2_4:43905256-43905275 None:intergenic 25.0%
!!! GCTGATTCTTTTACTAAATT+TGG + chr2_4:43905581-43905600 Msa0329960:intron 25.0%
!!! CCTTTTTTTATGAAAAAGAC+AGG - chr2_4:43905728-43905747 None:intergenic 25.0%
!!! CCTGTCTTTTTCATAAAAAA+AGG + chr2_4:43905725-43905744 Msa0329960:intron 25.0%
!! CTTCATGAAAAATATTGGTT+GGG - chr2_4:43906097-43906116 None:intergenic 25.0%
! ACTTCATGAAAAATATTGGT+TGG - chr2_4:43906098-43906117 None:intergenic 25.0%
! TAACAAATAGCTTAAGCTTT+AGG - chr2_4:43906148-43906167 None:intergenic 25.0%
!! TAAGCTATTTGTTAAATGCA+TGG + chr2_4:43906154-43906173 Msa0329960:intron 25.0%
!! AAGCTATTTGTTAAATGCAT+GGG + chr2_4:43906155-43906174 Msa0329960:intron 25.0%
! ATCTAAGTATGTTTCATAGA+AGG + chr2_4:43906424-43906443 Msa0329960:intron 25.0%
!! TTTTACTGAAAAACACAGTT+TGG + chr2_4:43906805-43906824 Msa0329960:intron 25.0%
! TTTACTGAAAAACACAGTTT+GGG + chr2_4:43906806-43906825 Msa0329960:intron 25.0%
! AATTCCAAAATTGCACATAT+AGG - chr2_4:43907325-43907344 None:intergenic 25.0%
! AATTCCAAAATTGCACATAT+AGG - chr2_4:43907325-43907344 None:intergenic 25.0%
! ATGTTTACTTCTATTCTTAG+AGG + chr2_4:43907921-43907940 Msa0329960:intron 25.0%
!!! TGACATGTTTTTAGTAATGT+GGG - chr2_4:43907992-43908011 None:intergenic 25.0%
!! GTTAAATTCATGCATTGATA+TGG + chr2_4:43908013-43908032 Msa0329960:intron 25.0%
! ATACATCCTTTAAGTCAAAA+TGG - chr2_4:43908113-43908132 None:intergenic 25.0%
!! AGTTATTGTAGTTTGCAAAT+TGG - chr2_4:43908139-43908158 None:intergenic 25.0%
! TTTCAACCATACAAGTTTAT+TGG + chr2_4:43908278-43908297 Msa0329960:intron 25.0%
! AGTCATAAAACTAATGATTG+AGG + chr2_4:43908411-43908430 Msa0329960:intron 25.0%
!! CTCTAGTATAATGATTTTTC+AGG + chr2_4:43908482-43908501 Msa0329960:intron 25.0%
!! GGACTTTGAATTTTGTAAAT+GGG - chr2_4:43908820-43908839 None:intergenic 25.0%
!! AGGACTTTGAATTTTGTAAA+TGG - chr2_4:43908821-43908840 None:intergenic 25.0%
! AGACATAAATCAACTCAAAA+AGG + chr2_4:43909602-43909621 Msa0329960:CDS 25.0%
! AAAGCAGTTCATTACAATTT+CGG + chr2_4:43909681-43909700 Msa0329960:CDS 25.0%
! ATACTATCCTTATGAAAACA+AGG - chr2_4:43910273-43910292 None:intergenic 25.0%
!! CATTTAAGATTCTTATTTGG+TGG + chr2_4:43910388-43910407 Msa0329960:CDS 25.0%
! AAGAACAGATACCAAAATAA+GGG - chr2_4:43910587-43910606 None:intergenic 25.0%
! TCATGCAATACTTAGTAATA+AGG - chr2_4:43910708-43910727 None:intergenic 25.0%
! ATTACTGTTAAATCCAATCA+CGG - chr2_4:43910914-43910933 None:intergenic 25.0%
AACCTATATCTCTACTTTCT+AGG + chr2_4:43901847-43901866 Msa0329960:five_prime_UTR 30.0%
ACCTATATCTCTACTTTCTA+GGG + chr2_4:43901848-43901867 Msa0329960:five_prime_UTR 30.0%
AAACGTTAATAGGAAGGAAA+GGG - chr2_4:43901947-43901966 None:intergenic 30.0%
TAGAAGAAACGTTAATAGGA+AGG - chr2_4:43901953-43901972 None:intergenic 30.0%
ACAAGCACTTACTATATAAG+TGG + chr2_4:43902507-43902526 Msa0329960:intron 30.0%
!! CTTATTTCTATTAGCTCTCT+AGG - chr2_4:43902617-43902636 None:intergenic 30.0%
CTCTAATAAGCTAATCTAAC+AGG + chr2_4:43902720-43902739 Msa0329960:intron 30.0%
!! TGATGATGTTTTTGTTATGC+AGG + chr2_4:43903236-43903255 Msa0329960:intron 30.0%
ATATGTGAATCGCATAAGAA+AGG - chr2_4:43903487-43903506 None:intergenic 30.0%
TCTTATGCGATTCACATATA+TGG + chr2_4:43903488-43903507 Msa0329960:intron 30.0%
! TATCACACTTTTCTGTATTC+TGG + chr2_4:43903630-43903649 Msa0329960:intron 30.0%
ACATCAATCATATAGGAAGT+AGG - chr2_4:43903770-43903789 None:intergenic 30.0%
! ATTTTTCACATGTCAGGTTT+AGG - chr2_4:43904306-43904325 None:intergenic 30.0%
! AGAAACATTTTTCACATGTC+AGG - chr2_4:43904312-43904331 None:intergenic 30.0%
GACATGTGAAAAATGTTTCT+TGG + chr2_4:43904312-43904331 Msa0329960:intron 30.0%
TTTCTTCTTGTCACAAGATT+AGG + chr2_4:43904339-43904358 Msa0329960:intron 30.0%
!! TAGAATCTAAGACCATTTTC+AGG + chr2_4:43904487-43904506 Msa0329960:intron 30.0%
CAAAAATCACAGGATTACAA+TGG - chr2_4:43904845-43904864 None:intergenic 30.0%
! CAGGGTTTATGTTATCTTTT+AGG + chr2_4:43904891-43904910 Msa0329960:intron 30.0%
!!! ATCTTTTAGGTTTAGCTACT+AGG + chr2_4:43904904-43904923 Msa0329960:intron 30.0%
TCTTTGCTTATAATAGTGAC+CGG - chr2_4:43905125-43905144 None:intergenic 30.0%
CATTGAATAACCGATGTATT+TGG + chr2_4:43905159-43905178 Msa0329960:intron 30.0%
TATTAAGCTTTCCCGTTATA+AGG + chr2_4:43905526-43905545 Msa0329960:intron 30.0%
!! AAATGACTCTAAAAGCATCT+AGG - chr2_4:43905683-43905702 None:intergenic 30.0%
! AGTCATTTGTGTTTCTGTTT+GGG + chr2_4:43905695-43905714 Msa0329960:intron 30.0%
AAGTGATTGGCATTTATTCT+TGG + chr2_4:43906055-43906074 Msa0329960:intron 30.0%
AGTGATTGGCATTTATTCTT+GGG + chr2_4:43906056-43906075 Msa0329960:intron 30.0%
!! ATGCTATAAGAGGTATTATC+GGG - chr2_4:43906391-43906410 None:intergenic 30.0%
!! GATGCTATAAGAGGTATTAT+CGG - chr2_4:43906392-43906411 None:intergenic 30.0%
AAGTATGTTTCATAGAAGGA+TGG + chr2_4:43906428-43906447 Msa0329960:intron 30.0%
GGGGATAAAAAATAAGGAAA+GGG - chr2_4:43906455-43906474 None:intergenic 30.0%
TGGGGATAAAAAATAAGGAA+AGG - chr2_4:43906456-43906475 None:intergenic 30.0%
!!! TCCTTATTTTTTATCCCCAT+TGG + chr2_4:43906457-43906476 Msa0329960:intron 30.0%
TCCAATGGGGATAAAAAATA+AGG - chr2_4:43906461-43906480 None:intergenic 30.0%
!!! TTATTTTTTATCCCCATTGG+AGG + chr2_4:43906460-43906479 Msa0329960:intron 30.0%
!! TTCTTTTTATGGTTGGTTGA+AGG - chr2_4:43906583-43906602 None:intergenic 30.0%
TTCAACCAACCATAAAAAGA+AGG + chr2_4:43906582-43906601 Msa0329960:intron 30.0%
TCAACCAACCATAAAAAGAA+GGG + chr2_4:43906583-43906602 Msa0329960:intron 30.0%
! ATGTGTGTAATTGTGTTTTC+TGG - chr2_4:43906628-43906647 None:intergenic 30.0%
!!! TTGTGTGTTTTAGAGAAAGA+AGG + chr2_4:43906830-43906849 Msa0329960:intron 30.0%
!!! TGTTTTAGAGAAAGAAGGAT+TGG + chr2_4:43906835-43906854 Msa0329960:intron 30.0%
!! TTTTGAGTGAACAGGAAAAT+TGG + chr2_4:43907809-43907828 Msa0329960:intron 30.0%
TTGTAACACATCAGTCAAAA+TGG + chr2_4:43907894-43907913 Msa0329960:intron 30.0%
ATGACATGTTAAACGAACAT+GGG + chr2_4:43907951-43907970 Msa0329960:intron 30.0%
TTTAGTAATGTGGGATCTAT+GGG - chr2_4:43907983-43908002 None:intergenic 30.0%
! TTTTAGTAATGTGGGATCTA+TGG - chr2_4:43907984-43908003 None:intergenic 30.0%
!!! GTGACATGTTTTTAGTAATG+TGG - chr2_4:43907993-43908012 None:intergenic 30.0%
ATCAGAGATTCAGAGTATAA+TGG - chr2_4:43908234-43908253 None:intergenic 30.0%
CAGTAACCAATAAACTTGTA+TGG - chr2_4:43908287-43908306 None:intergenic 30.0%
! CAAGTTTATTGGTTACTGTA+CGG + chr2_4:43908289-43908308 Msa0329960:intron 30.0%
!!! TTACTGTACGGTTTTTAAGT+AGG + chr2_4:43908301-43908320 Msa0329960:intron 30.0%
AACTTTCTCTACTCAAGAAA+AGG + chr2_4:43908325-43908344 Msa0329960:intron 30.0%
! TTTTATGACTACTTGATGCA+TGG - chr2_4:43908401-43908420 None:intergenic 30.0%
TAAAACTAATGATTGAGGAG+AGG + chr2_4:43908416-43908435 Msa0329960:intron 30.0%
! TTTAAGATCATTCATCTGAG+AGG + chr2_4:43908455-43908474 Msa0329960:intron 30.0%
!!! GTATAATGATTTTTCAGGTC+TGG + chr2_4:43908487-43908506 Msa0329960:intron 30.0%
!!! CATCCGAATATTTTAAGATG+AGG + chr2_4:43908530-43908549 Msa0329960:intron 30.0%
TCAAAGGGACTATATAATGT+TGG + chr2_4:43908570-43908589 Msa0329960:intron 30.0%
CAAAGGGACTATATAATGTT+GGG + chr2_4:43908571-43908590 Msa0329960:intron 30.0%
AAAGAATGTCTACAGTGAAA+GGG - chr2_4:43908624-43908643 None:intergenic 30.0%
AAAAGAATGTCTACAGTGAA+AGG - chr2_4:43908625-43908644 None:intergenic 30.0%
GTTCAATTGATGGAAAAAGA+TGG + chr2_4:43908769-43908788 Msa0329960:CDS 30.0%
ATATGAAGATGTTCTGTACA+AGG - chr2_4:43908841-43908860 None:intergenic 30.0%
TATGAAGATGTTCTGTACAA+GGG - chr2_4:43908840-43908859 None:intergenic 30.0%
ATATGAAGATGTTCTGTACA+AGG - chr2_4:43908841-43908860 None:intergenic 30.0%
!! TTTTTCTAGTGAGCCAATAT+TGG + chr2_4:43909076-43909095 Msa0329960:CDS 30.0%
AAGGTGGGGATTAAATAAAT+GGG - chr2_4:43909546-43909565 None:intergenic 30.0%
AAAGGTGGGGATTAAATAAA+TGG - chr2_4:43909547-43909566 None:intergenic 30.0%
TGGTAATAGTCATCTATGTA+TGG - chr2_4:43909779-43909798 None:intergenic 30.0%
! TGAAGGAAGTTCCTTTATTT+GGG - chr2_4:43909861-43909880 None:intergenic 30.0%
! TTTCATTTTCGTCTATTCGT+CGG + chr2_4:43909939-43909958 Msa0329960:CDS 30.0%
ATAAGAATCTTAAATGCCGA+AGG - chr2_4:43910384-43910403 None:intergenic 30.0%
! CGGCATTTAAGATTCTTATT+TGG + chr2_4:43910385-43910404 Msa0329960:CDS 30.0%
CAAGAACAGATACCAAAATA+AGG - chr2_4:43910588-43910607 None:intergenic 30.0%
ATTACCCATATTATAGTTGC+AGG - chr2_4:43910647-43910666 None:intergenic 30.0%
!!! CATTTGGTGCATTTTGTATA+AGG - chr2_4:43910759-43910778 None:intergenic 30.0%
TATACAAAATGCACCAAATG+TGG + chr2_4:43910759-43910778 Msa0329960:CDS 30.0%
TTACTGTTAAATCCAATCAC+GGG - chr2_4:43910913-43910932 None:intergenic 30.0%
ATTGGATTTAACAGTAATGC+TGG + chr2_4:43910916-43910935 Msa0329960:CDS 30.0%
TTGGATTTAACAGTAATGCT+GGG + chr2_4:43910917-43910936 Msa0329960:CDS 30.0%
ACCCTAGAAAGTAGAGATAT+AGG - chr2_4:43901852-43901871 None:intergenic 35.0%
TGATAGGAATTTAGCACATG+GGG - chr2_4:43901915-43901934 None:intergenic 35.0%
GTGATAGGAATTTAGCACAT+GGG - chr2_4:43901916-43901935 None:intergenic 35.0%
TGTGATAGGAATTTAGCACA+TGG - chr2_4:43901917-43901936 None:intergenic 35.0%
AACGTTAATAGGAAGGAAAG+GGG - chr2_4:43901946-43901965 None:intergenic 35.0%
GAAACGTTAATAGGAAGGAA+AGG - chr2_4:43901948-43901967 None:intergenic 35.0%
! TTCAGCGTTTTTCATCTCAA+AGG + chr2_4:43902041-43902060 Msa0329960:five_prime_UTR 35.0%
! TCAGCGTTTTTCATCTCAAA+GGG + chr2_4:43902042-43902061 Msa0329960:five_prime_UTR 35.0%
!! CAATCACTCCTTCGTTTTTA+TGG + chr2_4:43902075-43902094 Msa0329960:exon 35.0%
CATATCCACCATAAAAACGA+AGG - chr2_4:43902086-43902105 None:intergenic 35.0%
!!! CTTCGTTTTTATGGTGGATA+TGG + chr2_4:43902084-43902103 Msa0329960:exon 35.0%
!!! GTTTTTATGGTGGATATGGA+TGG + chr2_4:43902088-43902107 Msa0329960:exon 35.0%
TCAAACAAACCAGATCTACA+TGG - chr2_4:43902262-43902281 None:intergenic 35.0%
AGTGCTTGTTCATACAAACA+GGG - chr2_4:43902496-43902515 None:intergenic 35.0%
AAGTGCTTGTTCATACAAAC+AGG - chr2_4:43902497-43902516 None:intergenic 35.0%
!!! GATTTTTTGCATCTGTGTGT+TGG + chr2_4:43902765-43902784 Msa0329960:intron 35.0%
CGTATTGTTTGTACTTCCAT+TGG + chr2_4:43902985-43903004 Msa0329960:intron 35.0%
!! TGATGTTTTTGTTATGCAGG+AGG + chr2_4:43903239-43903258 Msa0329960:intron 35.0%
GCATCACAATATGCATTCTT+TGG + chr2_4:43903275-43903294 Msa0329960:CDS 35.0%
AGACTCAAAAGTTGGCAAAT+GGG - chr2_4:43903348-43903367 None:intergenic 35.0%
TAGACTCAAAAGTTGGCAAA+TGG - chr2_4:43903349-43903368 None:intergenic 35.0%
TCCTCATTAGACTCAAAAGT+TGG - chr2_4:43903356-43903375 None:intergenic 35.0%
!! AACTTTTGAGTCTAATGAGG+AGG + chr2_4:43903355-43903374 Msa0329960:CDS 35.0%
TCGCATAAGAAAGGAAAAGA+GGG - chr2_4:43903478-43903497 None:intergenic 35.0%
ATCGCATAAGAAAGGAAAAG+AGG - chr2_4:43903479-43903498 None:intergenic 35.0%
AAAGTTTCTCAGTTTCCATG+AGG + chr2_4:43904006-43904025 Msa0329960:intron 35.0%
TCTCTCATAGTTGACAAATC+TGG - chr2_4:43904060-43904079 None:intergenic 35.0%
TCATGCACTTAAGTTAGTTC+AGG + chr2_4:43904154-43904173 Msa0329960:intron 35.0%
CATGCACTTAAGTTAGTTCA+GGG + chr2_4:43904155-43904174 Msa0329960:intron 35.0%
ATACTCAACAAGCATAGGAT+AGG - chr2_4:43904201-43904220 None:intergenic 35.0%
! TATCCTATGCTTGTTGAGTA+TGG + chr2_4:43904200-43904219 Msa0329960:intron 35.0%
ACCAAGATAGCATACAACAA+GGG - chr2_4:43904233-43904252 None:intergenic 35.0%
AACCAAGATAGCATACAACA+AGG - chr2_4:43904234-43904253 None:intergenic 35.0%
TGTTGTATGCTATCTTGGTT+AGG + chr2_4:43904234-43904253 Msa0329960:intron 35.0%
GTTGTATGCTATCTTGGTTA+GGG + chr2_4:43904235-43904254 Msa0329960:intron 35.0%
GTTAGGGTTTCTATGATTGT+TGG + chr2_4:43904251-43904270 Msa0329960:intron 35.0%
! GTCTAGTTTGAATATGGACT+TGG - chr2_4:43904438-43904457 None:intergenic 35.0%
AAATCAACAACGCCTGAAAA+TGG - chr2_4:43904502-43904521 None:intergenic 35.0%
AGTTGCTAGGTAGTTAATAG+TGG + chr2_4:43904675-43904694 Msa0329960:intron 35.0%
ATAAACCCTGTAACAAACTC+CGG - chr2_4:43904881-43904900 None:intergenic 35.0%
AGGTTTAGCTACTAGGTTAA+CGG + chr2_4:43904911-43904930 Msa0329960:intron 35.0%
AGATAAAATTTGGGCCCTTA+AGG + chr2_4:43904937-43904956 Msa0329960:intron 35.0%
TTATGTAGATTGGGCCTTAA+GGG - chr2_4:43904954-43904973 None:intergenic 35.0%
TTTATGTAGATTGGGCCTTA+AGG - chr2_4:43904955-43904974 None:intergenic 35.0%
! TAAATGCCCAAGGTATTCAA+AGG - chr2_4:43905012-43905031 None:intergenic 35.0%
ATACCTTGGGCATTTAGAAA+AGG + chr2_4:43905016-43905035 Msa0329960:intron 35.0%
GAAAAGGCAATAGTAGTTAC+TGG + chr2_4:43905032-43905051 Msa0329960:intron 35.0%
!! AAAAAAAGTATTACGCCCTC+CGG + chr2_4:43905103-43905122 Msa0329960:intron 35.0%
AAGGCAAGAGAGGAAAAATT+AGG - chr2_4:43905632-43905651 None:intergenic 35.0%
AGAATTTCAATCTGCCAACA+AGG - chr2_4:43905651-43905670 None:intergenic 35.0%
! GAGTCATTTGTGTTTCTGTT+TGG + chr2_4:43905694-43905713 Msa0329960:intron 35.0%
! GTCATTTGTGTTTCTGTTTG+GGG + chr2_4:43905696-43905715 Msa0329960:intron 35.0%
TGGGATCGACAACTATATTT+GGG + chr2_4:43905927-43905946 Msa0329960:intron 35.0%
ATTCTTGTCTTACATTGGTC+AGG + chr2_4:43905991-43906010 Msa0329960:intron 35.0%
! ATGCTACTTGATGTTTGACT+TGG + chr2_4:43906195-43906214 Msa0329960:intron 35.0%
! TGCTACTTGATGTTTGACTT+GGG + chr2_4:43906196-43906215 Msa0329960:intron 35.0%
CAACCAACCATAAAAAGAAG+GGG + chr2_4:43906584-43906603 Msa0329960:intron 35.0%
AACCAACCATAAAAAGAAGG+GGG + chr2_4:43906585-43906604 Msa0329960:intron 35.0%
ATGGCTGAAAAAATGTGAGA+TGG + chr2_4:43906726-43906745 Msa0329960:intron 35.0%
GCATTCATTGCTGAGAAAAT+AGG - chr2_4:43907004-43907023 None:intergenic 35.0%
AGGAATTAAATTCCCAGGAA+AGG - chr2_4:43907049-43907068 None:intergenic 35.0%
TCCTGGGAATTTAATTCCTA+TGG + chr2_4:43907050-43907069 Msa0329960:intron 35.0%
ACCATAGGAATTAAATTCCC+AGG - chr2_4:43907054-43907073 None:intergenic 35.0%
AACTTAGCATTAGCAACCAT+AGG - chr2_4:43907069-43907088 None:intergenic 35.0%
!! TCTGATTAGCTTGCTTTCTT+AGG + chr2_4:43907165-43907184 Msa0329960:intron 35.0%
! GCTACCTATATGTGCAATTT+TGG + chr2_4:43907318-43907337 Msa0329960:intron 35.0%
! GCTACCTATATGTGCAATTT+TGG + chr2_4:43907318-43907337 Msa0329960:intron 35.0%
AGTCCTTGAATTTAGCGAAA+CGG + chr2_4:43907854-43907873 Msa0329960:intron 35.0%
TTTCCGTTTCGCTAAATTCA+AGG - chr2_4:43907860-43907879 None:intergenic 35.0%
TCGTTTAACATGTCATGTCT+TGG - chr2_4:43907947-43907966 None:intergenic 35.0%
CATGACATGTTAAACGAACA+TGG + chr2_4:43907950-43907969 Msa0329960:intron 35.0%
TGACATGTTAAACGAACATG+GGG + chr2_4:43907952-43907971 Msa0329960:intron 35.0%
TTAGTAATGTGGGATCTATG+GGG - chr2_4:43907982-43908001 None:intergenic 35.0%
GGCACACTAAATAAACATGT+GGG - chr2_4:43908053-43908072 None:intergenic 35.0%
TGGCACACTAAATAAACATG+TGG - chr2_4:43908054-43908073 None:intergenic 35.0%
TAGAAATCTTAGGAGCGAAT+AGG - chr2_4:43908199-43908218 None:intergenic 35.0%
TGATGCATGGCAATAATGAA+TGG - chr2_4:43908388-43908407 None:intergenic 35.0%
TATGTGTCTCTTGTGTTCAA+AGG + chr2_4:43908554-43908573 Msa0329960:intron 35.0%
ATGTGTCTCTTGTGTTCAAA+GGG + chr2_4:43908555-43908574 Msa0329960:intron 35.0%
AAGAATGTCTACAGTGAAAG+GGG - chr2_4:43908623-43908642 None:intergenic 35.0%
AAAGAGACGATGTTCATAAC+TGG + chr2_4:43908718-43908737 Msa0329960:CDS 35.0%
GATAGTGAAGGTTCAATTGA+TGG + chr2_4:43908759-43908778 Msa0329960:CDS 35.0%
GAAGACTTCTGTACCAATAT+TGG - chr2_4:43909092-43909111 None:intergenic 35.0%
TGTGATATGGAATGTTCAAG+TGG - chr2_4:43909178-43909197 None:intergenic 35.0%
TTGAACATTCCATATCACAC+TGG + chr2_4:43909179-43909198 Msa0329960:CDS 35.0%
!! AGTTGAGTGGATTAAACCTT+GGG + chr2_4:43909264-43909283 Msa0329960:CDS 35.0%
! TCTGTATTCGTTGACTAAGA+GGG - chr2_4:43909334-43909353 None:intergenic 35.0%
! TTCTGTATTCGTTGACTAAG+AGG - chr2_4:43909335-43909354 None:intergenic 35.0%
TCAACGAATACAGAACCAAT+TGG + chr2_4:43909340-43909359 Msa0329960:CDS 35.0%
CAACAACTACAGCTTCATAA+TGG + chr2_4:43909422-43909441 Msa0329960:CDS 35.0%
!! GTGATCATACTTGCTATTGA+CGG - chr2_4:43909582-43909601 None:intergenic 35.0%
TAGTCATCGTTTATCACATC+AGG + chr2_4:43909631-43909650 Msa0329960:CDS 35.0%
AGTCATCGTTTATCACATCA+GGG + chr2_4:43909632-43909651 Msa0329960:CDS 35.0%
! ATGAACTGCTTTCACTCTTT+TGG - chr2_4:43909673-43909692 None:intergenic 35.0%
TTCATCACTTGTCATATGCT+TGG - chr2_4:43909708-43909727 None:intergenic 35.0%
ATAGATGACTATTACCACCA+AGG + chr2_4:43909782-43909801 Msa0329960:CDS 35.0%
TCTTGCAAAAAAACCTTCTG+TGG + chr2_4:43909808-43909827 Msa0329960:CDS 35.0%
!!! GCAGAAAGGATGTTTTAACT+TGG - chr2_4:43909834-43909853 None:intergenic 35.0%
! GAAGTTCCTTTATTTGGGTT+GGG - chr2_4:43909856-43909875 None:intergenic 35.0%
GTGAAGGAAGTTCCTTTATT+TGG - chr2_4:43909862-43909881 None:intergenic 35.0%
AAATGCATGAGGATCATTAC+TGG - chr2_4:43909894-43909913 None:intergenic 35.0%
TCTTTAAATCAGAGCTACCA+GGG - chr2_4:43910006-43910025 None:intergenic 35.0%
ATCTTTAAATCAGAGCTACC+AGG - chr2_4:43910007-43910026 None:intergenic 35.0%
GAACACAATTAAGACGAAGA+AGG + chr2_4:43910155-43910174 Msa0329960:CDS 35.0%
!!! AGGATGACCTTGTTTTCATA+AGG + chr2_4:43910263-43910282 Msa0329960:CDS 35.0%
TATCTTCAATTGCTTCTTCC+TGG + chr2_4:43910325-43910344 Msa0329960:CDS 35.0%
! TTTTGGTATCTGTTCTTGAG+AGG + chr2_4:43910590-43910609 Msa0329960:CDS 35.0%
TTTGGTATCTGTTCTTGAGA+GGG + chr2_4:43910591-43910610 Msa0329960:CDS 35.0%
! ATATGGGTAATCGTTCCTTT+TGG + chr2_4:43910656-43910675 Msa0329960:CDS 35.0%
GCCTCATTTGATGAATTCTT+TGG + chr2_4:43910682-43910701 Msa0329960:CDS 35.0%
GCCAAAGAATTCATCAAATG+AGG - chr2_4:43910686-43910705 None:intergenic 35.0%
! TGGTGCATTTTGTATAAGGA+GGG - chr2_4:43910755-43910774 None:intergenic 35.0%
! TTGGTGCATTTTGTATAAGG+AGG - chr2_4:43910756-43910775 None:intergenic 35.0%
TGCTGCTAAAGCAATTAGTA+AGG + chr2_4:43910798-43910817 Msa0329960:CDS 35.0%
AATCCAGCAATAACTTCCTT+TGG - chr2_4:43910873-43910892 None:intergenic 35.0%
TGGATTTAACAGTAATGCTG+GGG + chr2_4:43910918-43910937 Msa0329960:CDS 35.0%
!! TCACTCCTTCGTTTTTATGG+TGG + chr2_4:43902078-43902097 Msa0329960:exon 40.0%
!!! ATGGTGGATATGGATGGTTT+TGG + chr2_4:43902094-43902113 Msa0329960:CDS 40.0%
!!! ATATGGATGGTTTTGGAGGT+GGG + chr2_4:43902101-43902120 Msa0329960:CDS 40.0%
! TTCTGGAGATCTTAGGCAAT+TGG + chr2_4:43902147-43902166 Msa0329960:CDS 40.0%
TCTGGAGATCTTAGGCAATT+GGG + chr2_4:43902148-43902167 Msa0329960:CDS 40.0%
TTGCATCAGAAACCTGAAAC+AGG - chr2_4:43902181-43902200 None:intergenic 40.0%
! TTTTTGCATCTGTGTGTTGG+AGG + chr2_4:43902768-43902787 Msa0329960:intron 40.0%
! TTTTGCATCTGTGTGTTGGA+GGG + chr2_4:43902769-43902788 Msa0329960:intron 40.0%
!! GGACAGTTTAATTTGCCACA+AGG + chr2_4:43902850-43902869 Msa0329960:intron 40.0%
! ACTATAACCTAAGCACTGTC+TGG - chr2_4:43902881-43902900 None:intergenic 40.0%
!! TTTGGGTTTGGTGGGAATTA+TGG + chr2_4:43903123-43903142 Msa0329960:intron 40.0%
!! GCCAACTTTTGAGTCTAATG+AGG + chr2_4:43903352-43903371 Msa0329960:CDS 40.0%
TCTCTCAAAATTCACGTGTC+TGG + chr2_4:43903431-43903450 Msa0329960:intron 40.0%
GCAAAGTGAGAGTGAATGTT+AGG - chr2_4:43903530-43903549 None:intergenic 40.0%
AACATTCACTCTCACTTTGC+AGG + chr2_4:43903530-43903549 Msa0329960:intron 40.0%
! ACGATCTTACAACCACCTTT+TGG + chr2_4:43903583-43903602 Msa0329960:CDS 40.0%
! TCTTACAACCACCTTTTGGA+AGG + chr2_4:43903587-43903606 Msa0329960:CDS 40.0%
CAACATCCTTACCTTCCAAA+AGG - chr2_4:43903601-43903620 None:intergenic 40.0%
! CACACTTTTCTGTATTCTGG+AGG + chr2_4:43903633-43903652 Msa0329960:intron 40.0%
CTTGTTTCAGTTCTTCCTCA+TGG - chr2_4:43904024-43904043 None:intergenic 40.0%
GGAAGAACTGAAACAAGTCA+CGG + chr2_4:43904027-43904046 Msa0329960:intron 40.0%
GAAGAACTGAAACAAGTCAC+GGG + chr2_4:43904028-43904047 Msa0329960:intron 40.0%
AGTGCAACTGAAACAAGTCA+CGG + chr2_4:43904098-43904117 Msa0329960:intron 40.0%
AGACCATACTCAACAAGCAT+AGG - chr2_4:43904206-43904225 None:intergenic 40.0%
CCAAGATAGCATACAACAAG+GGG - chr2_4:43904232-43904251 None:intergenic 40.0%
! GTTTAGGATCTTCAACTCTC+TGG - chr2_4:43904290-43904309 None:intergenic 40.0%
CAATAGTAAGGTAGCAGACA+TGG + chr2_4:43904457-43904476 Msa0329960:intron 40.0%
AGCAGTAAAGGGATATGGAA+TGG + chr2_4:43904545-43904564 Msa0329960:intron 40.0%
GCAGTAAAGGGATATGGAAT+GGG + chr2_4:43904546-43904565 Msa0329960:intron 40.0%
CAGTAAAGGGATATGGAATG+GGG + chr2_4:43904547-43904566 Msa0329960:intron 40.0%
!! TTCTAGAATGATACGTCACG+TGG - chr2_4:43904576-43904595 None:intergenic 40.0%
AACAGTGAAACTTAGGGCAT+TGG + chr2_4:43904747-43904766 Msa0329960:intron 40.0%
!! ACTTAGGGCATTGGACATTA+AGG + chr2_4:43904756-43904775 Msa0329960:intron 40.0%
!! CTTAGGGCATTGGACATTAA+GGG + chr2_4:43904757-43904776 Msa0329960:intron 40.0%
!! TTAGGGCATTGGACATTAAG+GGG + chr2_4:43904758-43904777 Msa0329960:intron 40.0%
TAAACCCTGTAACAAACTCC+GGG - chr2_4:43904880-43904899 None:intergenic 40.0%
! TTGCCTTTTCTAAATGCCCA+AGG - chr2_4:43905022-43905041 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr2_4:43905121-43905140 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr2_4:43905122-43905141 None:intergenic 40.0%
! TTGCTTTAAATAGTGACCGG+AGG + chr2_4:43905237-43905256 Msa0329960:intron 40.0%
! TCCTTAGGTACTGTTTCTTG+AGG + chr2_4:43905474-43905493 Msa0329960:intron 40.0%
TCCTCAAGAAACAGTACCTA+AGG - chr2_4:43905478-43905497 None:intergenic 40.0%
! TTTTTCCTCTCTTGCCTTGT+TGG + chr2_4:43905634-43905653 Msa0329960:intron 40.0%
TCTGCATGTTATCCCAGTTT+CGG + chr2_4:43905883-43905902 Msa0329960:intron 40.0%
CTGGGATCGACAACTATATT+TGG + chr2_4:43905926-43905945 Msa0329960:intron 40.0%
GATCGACAACTATATTTGGG+TGG + chr2_4:43905930-43905949 Msa0329960:intron 40.0%
! ACTATATTTGGGTGGTGGTT+TGG + chr2_4:43905938-43905957 Msa0329960:intron 40.0%
ATACTATTGTTAGTTCCCCG+AGG - chr2_4:43905964-43905983 None:intergenic 40.0%
ATTTATTCTTGGGCTTTGCC+TGG + chr2_4:43906066-43906085 Msa0329960:intron 40.0%
TGAAGGGTGGAGATATGATA+AGG - chr2_4:43906244-43906263 None:intergenic 40.0%
!! TTAAGGGTACCCAAAGTACT+TGG - chr2_4:43906329-43906348 None:intergenic 40.0%
CTAAGTATCACCACATTGAG+AGG - chr2_4:43906365-43906384 None:intergenic 40.0%
CTCTCAATGTGGTGATACTT+AGG + chr2_4:43906363-43906382 Msa0329960:intron 40.0%
CTCTTATAGCATCTCCAGTA+GGG + chr2_4:43906399-43906418 Msa0329960:intron 40.0%
TCTTATAGCATCTCCAGTAG+GGG + chr2_4:43906400-43906419 Msa0329960:intron 40.0%
ACATACTTAGATACCCCTAC+TGG - chr2_4:43906416-43906435 None:intergenic 40.0%
ACCAACCATAAAAAGAAGGG+GGG + chr2_4:43906586-43906605 Msa0329960:intron 40.0%
ATGGAAGCGAAATTGAGTGT+GGG + chr2_4:43906745-43906764 Msa0329960:intron 40.0%
! TTTTCCCTTTTGCCTTTCCT+GGG + chr2_4:43907034-43907053 Msa0329960:intron 40.0%
AATTCCCAGGAAAGGCAAAA+GGG - chr2_4:43907041-43907060 None:intergenic 40.0%
AAATTCCCAGGAAAGGCAAA+AGG - chr2_4:43907042-43907061 None:intergenic 40.0%
ACTGCTTTACTCACTTTCTC+TGG - chr2_4:43907704-43907723 None:intergenic 40.0%
TAGCAGCAGAAGTTAACAGA+GGG + chr2_4:43908086-43908105 Msa0329960:intron 40.0%
!!! GAGGGACCATTTTGACTTAA+AGG + chr2_4:43908104-43908123 Msa0329960:intron 40.0%
AGAATGTCTACAGTGAAAGG+GGG - chr2_4:43908622-43908641 None:intergenic 40.0%
CAGATGTAGAATCTGGATAG+TGG - chr2_4:43908689-43908708 None:intergenic 40.0%
TCCAGATTCTACATCTGATC+TGG + chr2_4:43908692-43908711 Msa0329960:intron 40.0%
! CAGAATGCGTATGATAGTGA+AGG + chr2_4:43908747-43908766 Msa0329960:CDS 40.0%
TAAATGGGCAAGAGAAGACT+GGG - chr2_4:43908805-43908824 None:intergenic 40.0%
TTCATATCCCGACAAACAAC+AGG + chr2_4:43909043-43909062 Msa0329960:CDS 40.0%
! AGTAAGCTCCTGTTGTTTGT+CGG - chr2_4:43909054-43909073 None:intergenic 40.0%
!! CAGTTGAGTGGATTAAACCT+TGG + chr2_4:43909263-43909282 Msa0329960:CDS 40.0%
TTAAACCTTGGGTCACACTT+TGG + chr2_4:43909275-43909294 Msa0329960:CDS 40.0%
AACACACGACAATATCCTAC+TGG + chr2_4:43909302-43909321 Msa0329960:CDS 40.0%
! CTGTATTCGTTGACTAAGAG+GGG - chr2_4:43909333-43909352 None:intergenic 40.0%
CAGCATATTACTAAGGAGGT+TGG - chr2_4:43909399-43909418 None:intergenic 40.0%
GTTGCTGCAGCATATTACTA+AGG - chr2_4:43909406-43909425 None:intergenic 40.0%
TGCAATTGAGTCATCAAGTG+AGG - chr2_4:43909458-43909477 None:intergenic 40.0%
GGGGATTAAATAAATGGGAC+TGG - chr2_4:43909541-43909560 None:intergenic 40.0%
!!! GTTTTTTTGCAAGACGACCT+TGG - chr2_4:43909802-43909821 None:intergenic 40.0%
!!! TGTTTTAACTTGGCCACAGA+AGG - chr2_4:43909824-43909843 None:intergenic 40.0%
!! TTTATTTGGGTTGGGCAGAA+AGG - chr2_4:43909848-43909867 None:intergenic 40.0%
TTTCTGCCCAACCCAAATAA+AGG + chr2_4:43909847-43909866 Msa0329960:CDS 40.0%
! GGAAGTTCCTTTATTTGGGT+TGG - chr2_4:43909857-43909876 None:intergenic 40.0%
TGATCCTCATGCATTTCTTC+AGG + chr2_4:43909898-43909917 Msa0329960:CDS 40.0%
TCAACCTGAAGAAATGCATG+AGG - chr2_4:43909905-43909924 None:intergenic 40.0%
!! TTTCTTCAGGTTGATTCCCT+AGG + chr2_4:43909911-43909930 Msa0329960:CDS 40.0%
!! TTCTTCAGGTTGATTCCCTA+GGG + chr2_4:43909912-43909931 Msa0329960:CDS 40.0%
AATTGTGTTCCACCATCTTG+TGG - chr2_4:43910145-43910164 None:intergenic 40.0%
ACAATTAAGACGAAGAAGGC+AGG + chr2_4:43910159-43910178 Msa0329960:CDS 40.0%
AAGTAGCTAGTCCTTCCAAT+AGG - chr2_4:43910186-43910205 None:intergenic 40.0%
ACTAGCTACTTCACTTCAAC+TGG + chr2_4:43910195-43910214 Msa0329960:CDS 40.0%
AAGGATAGTATCTGTCCCTA+AGG + chr2_4:43910282-43910301 Msa0329960:CDS 40.0%
AGGATAGTATCTGTCCCTAA+GGG + chr2_4:43910283-43910302 Msa0329960:CDS 40.0%
GCAATTGAAGATACTTCGCA+AGG - chr2_4:43910318-43910337 None:intergenic 40.0%
TCATGCAAACTATCCGCATA+AGG - chr2_4:43910357-43910376 None:intergenic 40.0%
GAATCTTAAATGCCGAAGGA+CGG - chr2_4:43910380-43910399 None:intergenic 40.0%
TATACATTGGCAGACAACCT+CGG - chr2_4:43910458-43910477 None:intergenic 40.0%
AGGTTGTCTGCCAATGTATA+CGG + chr2_4:43910458-43910477 Msa0329960:CDS 40.0%
!! AGATGGTGCTTCCCTTATTT+TGG + chr2_4:43910573-43910592 Msa0329960:CDS 40.0%
AGCAGCCTGCAACTATAATA+TGG + chr2_4:43910639-43910658 Msa0329960:CDS 40.0%
GCAGCCTGCAACTATAATAT+GGG + chr2_4:43910640-43910659 Msa0329960:CDS 40.0%
GATCCAATGTCATCCACATT+TGG - chr2_4:43910775-43910794 None:intergenic 40.0%
GGATTTAACAGTAATGCTGG+GGG + chr2_4:43910919-43910938 Msa0329960:CDS 40.0%
TTAGCACATGGGGTTGGATT+TGG - chr2_4:43901905-43901924 None:intergenic 45.0%
AGGAATTTAGCACATGGGGT+TGG - chr2_4:43901911-43901930 None:intergenic 45.0%
GAAAGGGGAAGATCTGTGAT+AGG - chr2_4:43901931-43901950 None:intergenic 45.0%
!!! GTGGATATGGATGGTTTTGG+AGG + chr2_4:43902097-43902116 Msa0329960:CDS 45.0%
!!! GATATGGATGGTTTTGGAGG+TGG + chr2_4:43902100-43902119 Msa0329960:CDS 45.0%
!!! TATGGATGGTTTTGGAGGTG+GGG + chr2_4:43902102-43902121 Msa0329960:CDS 45.0%
TTGGGTCATGTTCCTGTTTC+AGG + chr2_4:43902166-43902185 Msa0329960:CDS 45.0%
TTTGCATCTGTGTGTTGGAG+GGG + chr2_4:43902770-43902789 Msa0329960:intron 45.0%
TGGTGGGAATTATGGTCACA+TGG + chr2_4:43903131-43903150 Msa0329960:intron 45.0%
GGTGGGAATTATGGTCACAT+GGG + chr2_4:43903132-43903151 Msa0329960:intron 45.0%
CTTTGGTAAAGATGCTGTCC+AGG + chr2_4:43903292-43903311 Msa0329960:CDS 45.0%
!! CAACCACCTTTTGGAAGGTA+AGG + chr2_4:43903592-43903611 Msa0329960:intron 45.0%
CATCCTTACCTTCCAAAAGG+TGG - chr2_4:43903598-43903617 None:intergenic 45.0%
GAAATCATGGAAAACGGTGC+AGG - chr2_4:43903967-43903986 None:intergenic 45.0%
ACTGAAACAAGTCACGGGTT+TGG + chr2_4:43904033-43904052 Msa0329960:intron 45.0%
GTGCAACTGAAACAAGTCAC+GGG + chr2_4:43904099-43904118 Msa0329960:intron 45.0%
ACTGAAACAAGTCACGGGTT+TGG + chr2_4:43904033-43904052 Msa0329960:intron 45.0%
! CCCCTTGTTGTATGCTATCT+TGG + chr2_4:43904229-43904248 Msa0329960:intron 45.0%
ATCCCTTTACTGCTTGCACT+CGG - chr2_4:43904539-43904558 None:intergenic 45.0%
GTGCAAGCAGTAAAGGGATA+TGG + chr2_4:43904540-43904559 Msa0329960:intron 45.0%
TGGTCGCAACAGTGAAACTT+AGG + chr2_4:43904740-43904759 Msa0329960:intron 45.0%
GGTCGCAACAGTGAAACTTA+GGG + chr2_4:43904741-43904760 Msa0329960:intron 45.0%
! TCCTGTGATTTTTGCAGCTG+CGG + chr2_4:43904851-43904870 Msa0329960:intron 45.0%
CACATGAGCGACCTTATAAC+GGG - chr2_4:43905540-43905559 None:intergenic 45.0%
GCACATGAGCGACCTTATAA+CGG - chr2_4:43905541-43905560 None:intergenic 45.0%
CGACAACTATATTTGGGTGG+TGG + chr2_4:43905933-43905952 Msa0329960:intron 45.0%
! AATATTGGTTGGGTCAAGCC+AGG - chr2_4:43906087-43906106 None:intergenic 45.0%
!! GCTTAAGCTTTAGGAGCAGT+TGG - chr2_4:43906139-43906158 None:intergenic 45.0%
! AGGCTCAACGGAGTACTTAA+GGG - chr2_4:43906345-43906364 None:intergenic 45.0%
CCTACTGGAGATGCTATAAG+AGG - chr2_4:43906401-43906420 None:intergenic 45.0%
CCTCTTATAGCATCTCCAGT+AGG + chr2_4:43906398-43906417 Msa0329960:intron 45.0%
GCTATCAAATTCCCCACATC+AGG - chr2_4:43906488-43906507 None:intergenic 45.0%
GATGGAAGCGAAATTGAGTG+TGG + chr2_4:43906744-43906763 Msa0329960:intron 45.0%
TGGAAGCGAAATTGAGTGTG+GGG + chr2_4:43906746-43906765 Msa0329960:intron 45.0%
GAAATTGAGTGTGGGGTGAT+TGG + chr2_4:43906753-43906772 Msa0329960:intron 45.0%
CAGGAAAGGCAAAAGGGAAA+AGG - chr2_4:43907035-43907054 None:intergenic 45.0%
! CTTTTCCCTTTTGCCTTTCC+TGG + chr2_4:43907033-43907052 Msa0329960:intron 45.0%
TAGTTGAACAAGGCTGTCAG+TGG + chr2_4:43907643-43907662 Msa0329960:intron 45.0%
CCAATAACACCTGGGTTTCT+TGG - chr2_4:43907670-43907689 None:intergenic 45.0%
! CCAAGAAACCCAGGTGTTAT+TGG + chr2_4:43907667-43907686 Msa0329960:CDS 45.0%
CACGTTCACCAATAACACCT+GGG - chr2_4:43907678-43907697 None:intergenic 45.0%
! GCATTGATATGGGATCCAAG+TGG + chr2_4:43908024-43908043 Msa0329960:intron 45.0%
TAAACATGTGGGCATCCACT+TGG - chr2_4:43908042-43908061 None:intergenic 45.0%
CTGTTAACTTCTGCTGCTAG+AGG - chr2_4:43908085-43908104 None:intergenic 45.0%
CTAGCAGCAGAAGTTAACAG+AGG + chr2_4:43908085-43908104 Msa0329960:intron 45.0%
ATCGATGCTCGCAATTTCGA+GGG + chr2_4:43908165-43908184 Msa0329960:intron 45.0%
!!! TGAGGAGAGGCACTAGTTTT+AGG + chr2_4:43908429-43908448 Msa0329960:intron 45.0%
!!! GAGGAGAGGCACTAGTTTTA+GGG + chr2_4:43908430-43908449 Msa0329960:intron 45.0%
GAATGTCTACAGTGAAAGGG+GGG - chr2_4:43908621-43908640 None:intergenic 45.0%
GCCAGATCAGATGTAGAATC+TGG - chr2_4:43908696-43908715 None:intergenic 45.0%
AAATGGGCAAGAGAAGACTG+GGG - chr2_4:43908804-43908823 None:intergenic 45.0%
GTAAATGGGCAAGAGAAGAC+TGG - chr2_4:43908806-43908825 None:intergenic 45.0%
CTTCATATCCTGAGCAGCTA+AGG + chr2_4:43908853-43908872 Msa0329960:CDS 45.0%
TGATCAAGCCAGTTGTGAAC+TGG - chr2_4:43908918-43908937 None:intergenic 45.0%
CAGCTCATGATGACAAACGA+TGG + chr2_4:43908958-43908977 Msa0329960:CDS 45.0%
! AAGTGTGGAATGGAGGTATG+CGG - chr2_4:43908993-43909012 None:intergenic 45.0%
TGATTCGTGCAAGTGTGGAA+TGG - chr2_4:43909003-43909022 None:intergenic 45.0%
! GTAAGCTCCTGTTGTTTGTC+GGG - chr2_4:43909053-43909072 None:intergenic 45.0%
TTTCACTTCTTATCCTCCGC+CGG + chr2_4:43909112-43909131 Msa0329960:CDS 45.0%
GGTTCTCCAAGTCATAGTAC+AGG + chr2_4:43909152-43909171 Msa0329960:CDS 45.0%
AAGTGGCCTGTACTATGACT+TGG - chr2_4:43909161-43909180 None:intergenic 45.0%
AGCGCAGAATTGGAGAAATG+TGG - chr2_4:43909242-43909261 None:intergenic 45.0%
ACTCAACTGTAGCGCAGAAT+TGG - chr2_4:43909252-43909271 None:intergenic 45.0%
AATTCTGCGCTACAGTTGAG+TGG + chr2_4:43909251-43909270 Msa0329960:CDS 45.0%
! TATTCGTTGACTAAGAGGGG+AGG - chr2_4:43909330-43909349 None:intergenic 45.0%
AACCAATTGGTCAACCAAGC+AGG + chr2_4:43909353-43909372 Msa0329960:CDS 45.0%
ACCAATTGGTCAACCAAGCA+GGG + chr2_4:43909354-43909373 Msa0329960:CDS 45.0%
AACCAAGCAGGGTTATATCC+AGG + chr2_4:43909365-43909384 Msa0329960:CDS 45.0%
CAGGGTTATATCCAGGAGAT+CGG + chr2_4:43909372-43909391 Msa0329960:CDS 45.0%
GCTGCAGCATATTACTAAGG+AGG - chr2_4:43909403-43909422 None:intergenic 45.0%
! TTGCTATTGACGGATGAGCT+AGG - chr2_4:43909572-43909591 None:intergenic 45.0%
!! GCTTTCACTCTTTTGGCTAC+TGG - chr2_4:43909666-43909685 None:intergenic 45.0%
! TTTTTGCAAGACGACCTTGG+TGG - chr2_4:43909799-43909818 None:intergenic 45.0%
TTACTGGAACGTGTTCGTGA+AGG - chr2_4:43909878-43909897 None:intergenic 45.0%
CGAAAATGAAACCCTCCCTA+GGG - chr2_4:43909930-43909949 None:intergenic 45.0%
ACGAAAATGAAACCCTCCCT+AGG - chr2_4:43909931-43909950 None:intergenic 45.0%
GAGAATCAGCCTCAAGAAGA+GGG - chr2_4:43909970-43909989 None:intergenic 45.0%
TCTCCAAATTCTTCCATCCC+TGG + chr2_4:43909986-43910005 Msa0329960:CDS 45.0%
CTACCAGGGATGGAAGAATT+TGG - chr2_4:43909992-43910011 None:intergenic 45.0%
TAAATCAGAGCTACCAGGGA+TGG - chr2_4:43910002-43910021 None:intergenic 45.0%
!! TTCAGAGAAGCCTCTAGAAC+AGG + chr2_4:43910027-43910046 Msa0329960:CDS 45.0%
AATGTAGGCTCCTGTTCTAG+AGG - chr2_4:43910040-43910059 None:intergenic 45.0%
CTTGTGGCTGATTAGACTGT+AGG - chr2_4:43910129-43910148 None:intergenic 45.0%
CAGTCTAATCAGCCACAAGA+TGG + chr2_4:43910130-43910149 Msa0329960:CDS 45.0%
TCTAATCAGCCACAAGATGG+TGG + chr2_4:43910133-43910152 Msa0329960:CDS 45.0%
GGAAAAATGGGCACAAGGTT+GGG + chr2_4:43910230-43910249 Msa0329960:CDS 45.0%
! TTCCTGGTAGTGACCTTATG+CGG + chr2_4:43910341-43910360 Msa0329960:CDS 45.0%
! TAGTTTGCATGACCGTCCTT+CGG + chr2_4:43910365-43910384 Msa0329960:CDS 45.0%
GGTTGTCTGCCAATGTATAC+GGG + chr2_4:43910459-43910478 Msa0329960:CDS 45.0%
GTTGTCTGCCAATGTATACG+GGG + chr2_4:43910460-43910479 Msa0329960:CDS 45.0%
GATCCATTCCCCGTATACAT+TGG - chr2_4:43910471-43910490 None:intergenic 45.0%
TGTATACGGGGAATGGATCT+TGG + chr2_4:43910472-43910491 Msa0329960:CDS 45.0%
ACAAACAACTGCAGCAAGAC+AGG - chr2_4:43910509-43910528 None:intergenic 45.0%
TTGTGGATCGGTTAGAAGCT+CGG - chr2_4:43910620-43910639 None:intergenic 45.0%
TTATAGTTGCAGGCTGCTTG+TGG - chr2_4:43910637-43910656 None:intergenic 45.0%
ATCAAATGAGGCCTGCCAAA+AGG - chr2_4:43910674-43910693 None:intergenic 45.0%
GCACCAAATGTGGATGACAT+TGG + chr2_4:43910769-43910788 Msa0329960:CDS 45.0%
! TTTGGTGGTCATCAGTGTGA+GGG - chr2_4:43910855-43910874 None:intergenic 45.0%
CCAGCAATAACTTCCTTTGG+TGG - chr2_4:43910870-43910889 None:intergenic 45.0%
CCACCAAAGGAAGTTATTGC+TGG + chr2_4:43910867-43910886 Msa0329960:CDS 45.0%
TGGGGTTGGATTTGGATCAG+AGG - chr2_4:43901897-43901916 None:intergenic 50.0%
!!! ATGGATGGTTTTGGAGGTGG+GGG + chr2_4:43902103-43902122 Msa0329960:CDS 50.0%
CTAAGATCTCCAGAACCAGG+AGG - chr2_4:43902142-43902161 None:intergenic 50.0%
!! CTCCTGGTTCTGGAGATCTT+AGG + chr2_4:43902140-43902159 Msa0329960:CDS 50.0%
TGCCTAAGATCTCCAGAACC+AGG - chr2_4:43902145-43902164 None:intergenic 50.0%
TCATCTGGGCCATGTAGATC+TGG + chr2_4:43902250-43902269 Msa0329960:intron 50.0%
ATCTGTGTGTTGGAGGGGTA+GGG + chr2_4:43902775-43902794 Msa0329960:intron 50.0%
!! CACTGTCTGGATTAGCCTTG+TGG - chr2_4:43902868-43902887 None:intergenic 50.0%
GGCTAATCCAGACAGTGCTT+AGG + chr2_4:43902871-43902890 Msa0329960:intron 50.0%
CACTCTCACTTTGCAGGATG+AGG + chr2_4:43903536-43903555 Msa0329960:intron 50.0%
TTTACTGCTTGCACTCGGCA+TGG - chr2_4:43904534-43904553 None:intergenic 50.0%
ATGCCGAGTGCAAGCAGTAA+AGG + chr2_4:43904533-43904552 Msa0329960:intron 50.0%
TGCCGAGTGCAAGCAGTAAA+GGG + chr2_4:43904534-43904553 Msa0329960:intron 50.0%
GTTAATAGTGGCGTTGCACG+TGG + chr2_4:43904687-43904706 Msa0329960:intron 50.0%
! CATTGGACATTAAGGGGTGC+CGG + chr2_4:43904764-43904783 Msa0329960:intron 50.0%
CGATTCACACCAACGTGTTC+TGG - chr2_4:43904800-43904819 None:intergenic 50.0%
AATGGAAGATCTGTGTGCCG+CGG - chr2_4:43904827-43904846 None:intergenic 50.0%
ACACGGGCCTTTGAATACCT+TGG + chr2_4:43905002-43905021 Msa0329960:intron 50.0%
CACGGGCCTTTGAATACCTT+GGG + chr2_4:43905003-43905022 Msa0329960:intron 50.0%
! GACACAAGGCTTGGTTGTTG+TGG - chr2_4:43905377-43905396 None:intergenic 50.0%
ACACTTAGCGACACAAGGCT+TGG - chr2_4:43905386-43905405 None:intergenic 50.0%
! AAGCCTTGTGTCGCTAAGTG+TGG + chr2_4:43905385-43905404 Msa0329960:intron 50.0%
! CTTGTGTCGCTAAGTGTGGT+CGG + chr2_4:43905389-43905408 Msa0329960:intron 50.0%
ATCTGCCAACAAGGCAAGAG+AGG - chr2_4:43905642-43905661 None:intergenic 50.0%
TGGGATAACATGCAGAGCAG+TGG - chr2_4:43905879-43905898 None:intergenic 50.0%
!! AAGATGTCGGCTTTGAAGGG+TGG - chr2_4:43906257-43906276 None:intergenic 50.0%
ACCCTTCAAAGCCGACATCT+TGG + chr2_4:43906256-43906275 Msa0329960:intron 50.0%
!! GCCAAGATGTCGGCTTTGAA+GGG - chr2_4:43906260-43906279 None:intergenic 50.0%
!! TGCCAAGATGTCGGCTTTGA+AGG - chr2_4:43906261-43906280 None:intergenic 50.0%
CCAGCCTCTCCAAGTACTTT+GGG + chr2_4:43906317-43906336 Msa0329960:intron 50.0%
! GGTACCCAAAGTACTTGGAG+AGG - chr2_4:43906324-43906343 None:intergenic 50.0%
! GAGGCTCAACGGAGTACTTA+AGG - chr2_4:43906346-43906365 None:intergenic 50.0%
CACCACATTGAGAGGCTCAA+CGG - chr2_4:43906357-43906376 None:intergenic 50.0%
CACATCAGGTTCCTCCAATG+GGG - chr2_4:43906474-43906493 None:intergenic 50.0%
CCACATCAGGTTCCTCCAAT+GGG - chr2_4:43906475-43906494 None:intergenic 50.0%
CCATTGGAGGAACCTGATGT+GGG + chr2_4:43906473-43906492 Msa0329960:intron 50.0%
CATTGGAGGAACCTGATGTG+GGG + chr2_4:43906474-43906493 Msa0329960:intron 50.0%
! GCCCCCCTTCTTTTTATGGT+TGG - chr2_4:43906590-43906609 None:intergenic 50.0%
! CTTCGCCCCCCTTCTTTTTA+TGG - chr2_4:43906594-43906613 None:intergenic 50.0%
AGTGTGGGGTGATTGGTATG+TGG + chr2_4:43906760-43906779 Msa0329960:intron 50.0%
CCACGTTCACCAATAACACC+TGG - chr2_4:43907679-43907698 None:intergenic 50.0%
!! CCAGGTGTTATTGGTGAACG+TGG + chr2_4:43907676-43907695 Msa0329960:CDS 50.0%
TGCTGCTAGAGGCTATAACG+TGG - chr2_4:43908074-43908093 None:intergenic 50.0%
GATCGATGCTCGCAATTTCG+AGG + chr2_4:43908164-43908183 Msa0329960:intron 50.0%
TACAGTGAAAGGGGGGAGAA+GGG - chr2_4:43908614-43908633 None:intergenic 50.0%
CACTAGAGCAATGTTGGAGG+TGG - chr2_4:43908893-43908912 None:intergenic 50.0%
GCTCACTAGAGCAATGTTGG+AGG - chr2_4:43908896-43908915 None:intergenic 50.0%
CTGGCTCACTAGAGCAATGT+TGG - chr2_4:43908899-43908918 None:intergenic 50.0%
CTAGTGAGCCAGTTCACAAC+TGG + chr2_4:43908907-43908926 Msa0329960:CDS 50.0%
TTCGTGCAAGTGTGGAATGG+AGG - chr2_4:43909000-43909019 None:intergenic 50.0%
!! GGTGTTGATTCGTGCAAGTG+TGG - chr2_4:43909008-43909027 None:intergenic 50.0%
TTCACTTCTTATCCTCCGCC+GGG + chr2_4:43909113-43909132 Msa0329960:CDS 50.0%
AACCTTGGGTCACACTTTGG+TGG + chr2_4:43909278-43909297 Msa0329960:CDS 50.0%
TTCCACCAAAGTGTGACCCA+AGG - chr2_4:43909283-43909302 None:intergenic 50.0%
ACCCTGCTTGGTTGACCAAT+TGG - chr2_4:43909358-43909377 None:intergenic 50.0%
CTCCTGGATATAACCCTGCT+TGG - chr2_4:43909370-43909389 None:intergenic 50.0%
CATCCTGTTCAGCAATCTGC+AGG + chr2_4:43909500-43909519 Msa0329960:CDS 50.0%
TAGCCTGCAGATTGCTGAAC+AGG - chr2_4:43909506-43909525 None:intergenic 50.0%
CAATCTGCAGGCTACTTGTC+AGG + chr2_4:43909512-43909531 Msa0329960:CDS 50.0%
GATGAGCTAGGAGAAAGGTG+GGG - chr2_4:43909560-43909579 None:intergenic 50.0%
GGATGAGCTAGGAGAAAGGT+GGG - chr2_4:43909561-43909580 None:intergenic 50.0%
! TGACGGATGAGCTAGGAGAA+AGG - chr2_4:43909565-43909584 None:intergenic 50.0%
!! TTCAGGTTGATTCCCTAGGG+AGG + chr2_4:43909915-43909934 Msa0329960:CDS 50.0%
!! TCAGGTTGATTCCCTAGGGA+GGG + chr2_4:43909916-43909935 Msa0329960:CDS 50.0%
GGAGAATCAGCCTCAAGAAG+AGG - chr2_4:43909971-43909990 None:intergenic 50.0%
GTGACTCTGGCAGCAAATGT+AGG - chr2_4:43910055-43910074 None:intergenic 50.0%
TGCTGCCAGAGTCACAATTG+AGG + chr2_4:43910060-43910079 Msa0329960:CDS 50.0%
GCCAGAGTCACAATTGAGGA+CGG + chr2_4:43910064-43910083 Msa0329960:CDS 50.0%
ACCGTCCTCAATTGTGACTC+TGG - chr2_4:43910068-43910087 None:intergenic 50.0%
ACGAAGAAGGCAGGTCCTAT+TGG + chr2_4:43910168-43910187 Msa0329960:CDS 50.0%
AGAAGGCAGGTCCTATTGGA+AGG + chr2_4:43910172-43910191 Msa0329960:CDS 50.0%
TTGACCCGCTGGGGAAAAAT+GGG + chr2_4:43910218-43910237 Msa0329960:CDS 50.0%
!! TTGTGCCCATTTTTCCCCAG+CGG - chr2_4:43910226-43910245 None:intergenic 50.0%
GGGAAAAATGGGCACAAGGT+TGG + chr2_4:43910229-43910248 Msa0329960:CDS 50.0%
ATCCGCATAAGGTCACTACC+AGG - chr2_4:43910346-43910365 None:intergenic 50.0%
! CTTATTTGGTGGTCTCCCCT+CGG + chr2_4:43910399-43910418 Msa0329960:CDS 50.0%
CTGCCAATGTATACGGGGAA+TGG + chr2_4:43910465-43910484 Msa0329960:CDS 50.0%
! GGGTAATCGTTCCTTTTGGC+AGG + chr2_4:43910660-43910679 Msa0329960:CDS 50.0%
CTTGCACGCAAGAGTTCAAC+AGG - chr2_4:43910829-43910848 None:intergenic 50.0%
! CTTTGGTGGTCATCAGTGTG+AGG - chr2_4:43910856-43910875 None:intergenic 50.0%
CTCACACTGATGACCACCAA+AGG + chr2_4:43910854-43910873 Msa0329960:CDS 50.0%
TAACAGTAATGCTGGGGGAG+TGG + chr2_4:43910924-43910943 Msa0329960:CDS 50.0%
TTTGGAGGTGGGGGTGATCT+TGG + chr2_4:43902112-43902131 Msa0329960:CDS 55.0%
CATCTGTGTGTTGGAGGGGT+AGG + chr2_4:43902774-43902793 Msa0329960:intron 55.0%
TCTGTGTGTTGGAGGGGTAG+GGG + chr2_4:43902776-43902795 Msa0329960:intron 55.0%
GAGGGTTGAAGAACATCGCG+TGG + chr2_4:43902798-43902817 Msa0329960:intron 55.0%
TGCTGTCCAGGAAGTCGAGT+TGG + chr2_4:43903304-43903323 Msa0329960:CDS 55.0%
GCTGTCCAGGAAGTCGAGTT+GGG + chr2_4:43903305-43903324 Msa0329960:CDS 55.0%
!! TCCAGGAAGTCGAGTTGGGA+GGG + chr2_4:43903309-43903328 Msa0329960:CDS 55.0%
! CGAGTTGGGAGGGTTAGAAG+AGG + chr2_4:43903319-43903338 Msa0329960:CDS 55.0%
AACAACTACTCGCGCTGCAC+CGG - chr2_4:43904721-43904740 None:intergenic 55.0%
ACCAACGTGTTCTGGCACTG+TGG - chr2_4:43904792-43904811 None:intergenic 55.0%
TTGGTGTGAATCGTGTCCCG+CGG + chr2_4:43904807-43904826 Msa0329960:intron 55.0%
ATGGAAGATCTGTGTGCCGC+GGG - chr2_4:43904826-43904845 None:intergenic 55.0%
GCCGCAGCTGCAAAAATCAC+AGG - chr2_4:43904855-43904874 None:intergenic 55.0%
!! GCAGCCCGGAGTTTGTTACA+GGG + chr2_4:43904873-43904892 Msa0329960:intron 55.0%
CGACCACACTTAGCGACACA+AGG - chr2_4:43905391-43905410 None:intergenic 55.0%
! TAGCGGTCGACTCCGAAACT+GGG - chr2_4:43905898-43905917 None:intergenic 55.0%
! ATAGCGGTCGACTCCGAAAC+TGG - chr2_4:43905899-43905918 None:intergenic 55.0%
TCGACCGCTATGCGTGATCT+GGG + chr2_4:43905908-43905927 Msa0329960:intron 55.0%
CGATCCCAGATCACGCATAG+CGG - chr2_4:43905915-43905934 None:intergenic 55.0%
! TTTGGGTGGTGGTTTGGCCT+CGG + chr2_4:43905944-43905963 Msa0329960:intron 55.0%
GAGTGCAGCTGCCAAGATGT+CGG - chr2_4:43906270-43906289 None:intergenic 55.0%
GCCAGCCTCTCCAAGTACTT+TGG + chr2_4:43906316-43906335 Msa0329960:intron 55.0%
! CCCAAAGTACTTGGAGAGGC+TGG - chr2_4:43906320-43906339 None:intergenic 55.0%
CTCCGTTGAGCCTCTCAATG+TGG + chr2_4:43906352-43906371 Msa0329960:intron 55.0%
CCCATTGGAGGAACCTGATG+TGG + chr2_4:43906472-43906491 Msa0329960:intron 55.0%
CCCACATCAGGTTCCTCCAA+TGG - chr2_4:43906476-43906495 None:intergenic 55.0%
GTGGGGTGATTGGTATGTGG+AGG + chr2_4:43906763-43906782 Msa0329960:intron 55.0%
GTCAGTGGACCAAGAAACCC+AGG + chr2_4:43907658-43907677 Msa0329960:CDS 55.0%
ACAGTGAAAGGGGGGAGAAG+GGG - chr2_4:43908613-43908632 None:intergenic 55.0%
CTACAGTGAAAGGGGGGAGA+AGG - chr2_4:43908615-43908634 None:intergenic 55.0%
TGCTCTTGCCTTAGCTGCTC+AGG - chr2_4:43908864-43908883 None:intergenic 55.0%
GCTGCTGCTCCAGTGTGATA+TGG - chr2_4:43909191-43909210 None:intergenic 55.0%
CTAAGAGGGGAGGAACCAGT+AGG - chr2_4:43909320-43909339 None:intergenic 55.0%
CGGATGAGCTAGGAGAAAGG+TGG - chr2_4:43909562-43909581 None:intergenic 55.0%
ACTTCAACTGGTTGACCCGC+TGG + chr2_4:43910207-43910226 Msa0329960:CDS 55.0%
CTTCAACTGGTTGACCCGCT+GGG + chr2_4:43910208-43910227 Msa0329960:CDS 55.0%
TTCAACTGGTTGACCCGCTG+GGG + chr2_4:43910209-43910228 Msa0329960:CDS 55.0%
GTTGACCCGCTGGGGAAAAA+TGG + chr2_4:43910217-43910236 Msa0329960:CDS 55.0%
!! TGTGCCCATTTTTCCCCAGC+GGG - chr2_4:43910225-43910244 None:intergenic 55.0%
GCTGGGGAAAAATGGGCACA+AGG + chr2_4:43910225-43910244 Msa0329960:CDS 55.0%
CAAGGTTGGGCTTGCAGCTA+AGG + chr2_4:43910243-43910262 Msa0329960:CDS 55.0%
CAAGGAGCTTGCGTCCCTTA+GGG - chr2_4:43910300-43910319 None:intergenic 55.0%
CATGTAGTCACTGCAGCTGC+TGG - chr2_4:43910427-43910446 None:intergenic 55.0%
GACTACATGCAACCTTGCCG+AGG + chr2_4:43910438-43910457 Msa0329960:CDS 55.0%
ATTGGCAGACAACCTCGGCA+AGG - chr2_4:43910453-43910472 None:intergenic 55.0%
CTCCAGCAGTGCTTCCAACA+GGG - chr2_4:43910555-43910574 None:intergenic 55.0%
TCTCCAGCAGTGCTTCCAAC+AGG - chr2_4:43910556-43910575 None:intergenic 55.0%
!! GTTGGAAGCACTGCTGGAGA+TGG + chr2_4:43910556-43910575 Msa0329960:CDS 55.0%
GTTGCAGGCTGCTTGTGGAT+CGG - chr2_4:43910632-43910651 None:intergenic 55.0%
CAGCGTTCTGTTCCCGTGAT+TGG + chr2_4:43910898-43910917 Msa0329960:CDS 55.0%
! GGTGATCTTGGTGGACCTCC+TGG + chr2_4:43902124-43902143 Msa0329960:CDS 60.0%
! CTTGGTGGACCTCCTGGTTC+TGG + chr2_4:43902130-43902149 Msa0329960:CDS 60.0%
TGTGTTGGAGGGGTAGGGGA+GGG + chr2_4:43902780-43902799 Msa0329960:intron 60.0%
!! GTCCAGGAAGTCGAGTTGGG+AGG + chr2_4:43903308-43903327 Msa0329960:CDS 60.0%
ACCCTCCCAACTCGACTTCC+TGG - chr2_4:43903313-43903332 None:intergenic 60.0%
GTTGCACGTGGTAATCGCGC+CGG + chr2_4:43904699-43904718 Msa0329960:intron 60.0%
GGTGCAGCGCGAGTAGTTGT+TGG + chr2_4:43904720-43904739 Msa0329960:intron 60.0%
GCCACAGTGCCAGAACACGT+TGG + chr2_4:43904788-43904807 Msa0329960:intron 60.0%
! TTTTTGCAGCTGCGGCAGCC+CGG + chr2_4:43904859-43904878 Msa0329960:intron 60.0%
!! GGCAGCCCGGAGTTTGTTAC+AGG + chr2_4:43904872-43904891 Msa0329960:intron 60.0%
GTCGACCGCTATGCGTGATC+TGG + chr2_4:43905907-43905926 Msa0329960:intron 60.0%
! TTGGGTGGTGGTTTGGCCTC+GGG + chr2_4:43905945-43905964 Msa0329960:intron 60.0%
ACTTCTTATCCTCCGCCGGG+TGG + chr2_4:43909116-43909135 Msa0329960:CDS 60.0%
TGTTGAGATCGACCACCCGG+CGG - chr2_4:43909131-43909150 None:intergenic 60.0%
CCCTGTTGAGATCGACCACC+CGG - chr2_4:43909134-43909153 None:intergenic 60.0%
CCGGGTGGTCGATCTCAACA+GGG + chr2_4:43909131-43909150 Msa0329960:CDS 60.0%
CACTGGAGCAGCAGCTCAGT+TGG + chr2_4:43909196-43909215 Msa0329960:CDS 60.0%
AGGAGGTTGGACCGATCTCC+TGG - chr2_4:43909386-43909405 None:intergenic 60.0%
TCAGCCTCAAGAAGAGGGCG+AGG - chr2_4:43909965-43909984 None:intergenic 60.0%
GCAAGGAGCTTGCGTCCCTT+AGG - chr2_4:43910301-43910320 None:intergenic 60.0%
ACTGCAGCTGCTGGATCCGA+GGG - chr2_4:43910418-43910437 None:intergenic 60.0%
CATCCTCCTCTACGCCCTGT+TGG + chr2_4:43910538-43910557 Msa0329960:CDS 60.0%
CTTCCAACAGGGCGTAGAGG+AGG - chr2_4:43910544-43910563 None:intergenic 60.0%
GTGCTTCCAACAGGGCGTAG+AGG - chr2_4:43910547-43910566 None:intergenic 60.0%
GGAGGGACTGCATGATGCTG+TGG - chr2_4:43910738-43910757 None:intergenic 60.0%
GGTGGTCATCAGTGTGAGGG+AGG - chr2_4:43910852-43910871 None:intergenic 60.0%
CAGTAATGCTGGGGGAGTGG+AGG + chr2_4:43910927-43910946 Msa0329960:CDS 60.0%
GGAGGTGGGGGTGATCTTGG+TGG + chr2_4:43902115-43902134 Msa0329960:CDS 65.0%
GTGTGTTGGAGGGGTAGGGG+AGG + chr2_4:43902779-43902798 Msa0329960:intron 65.0%
GTGTTCTGGCACTGTGGCGC+CGG - chr2_4:43904786-43904805 None:intergenic 65.0%
! TGGGTGGTGGTTTGGCCTCG+GGG + chr2_4:43905946-43905965 Msa0329960:intron 65.0%
GCCGGGTGGTCGATCTCAAC+AGG + chr2_4:43909130-43909149 Msa0329960:CDS 65.0%
TCGGCCTCGCCCTCTTCTTG+AGG + chr2_4:43909958-43909977 Msa0329960:CDS 65.0%
CTGCAGCTGCTGGATCCGAG+GGG - chr2_4:43910417-43910436 None:intergenic 65.0%
CACTGCAGCTGCTGGATCCG+AGG - chr2_4:43910419-43910438 None:intergenic 65.0%
!! CGCCCTGTTGGAAGCACTGC+TGG + chr2_4:43910550-43910569 Msa0329960:CDS 65.0%
TGAGATCGACCACCCGGCGG+AGG - chr2_4:43909128-43909147 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 43901829 43910957 43901829 ID=Msa0329960;Name=Msa0329960
chr2_4 mRNA 43901829 43910957 43901829 ID=Msa0329960-mRNA-1;Parent=Msa0329960;Name=Msa0329960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=265|1|0.8|1|1|1|5|0|872
chr2_4 exon 43901829 43902187 43901829 ID=Msa0329960-mRNA-1:exon:13396;Parent=Msa0329960-mRNA-1
chr2_4 exon 43903258 43903400 43903258 ID=Msa0329960-mRNA-1:exon:13397;Parent=Msa0329960-mRNA-1
chr2_4 exon 43903552 43903608 43903552 ID=Msa0329960-mRNA-1:exon:13398;Parent=Msa0329960-mRNA-1
chr2_4 exon 43907646 43907709 43907646 ID=Msa0329960-mRNA-1:exon:13399;Parent=Msa0329960-mRNA-1
chr2_4 exon 43908697 43910957 43908697 ID=Msa0329960-mRNA-1:exon:13400;Parent=Msa0329960-mRNA-1
chr2_4 five_prime_UTR 43901829 43902093 43901829 ID=Msa0329960-mRNA-1:five_prime_utr;Parent=Msa0329960-mRNA-1
chr2_4 CDS 43902094 43902187 43902094 ID=Msa0329960-mRNA-1:cds;Parent=Msa0329960-mRNA-1
chr2_4 CDS 43903258 43903400 43903258 ID=Msa0329960-mRNA-1:cds;Parent=Msa0329960-mRNA-1
chr2_4 CDS 43903552 43903608 43903552 ID=Msa0329960-mRNA-1:cds;Parent=Msa0329960-mRNA-1
chr2_4 CDS 43907646 43907709 43907646 ID=Msa0329960-mRNA-1:cds;Parent=Msa0329960-mRNA-1
chr2_4 CDS 43908697 43910957 43908697 ID=Msa0329960-mRNA-1:cds;Parent=Msa0329960-mRNA-1
Gene Sequence

>Msa0329960

ATGGTGGATATGGATGGTTTTGGAGGTGGGGGTGATCTTGGTGGACCTCCTGGTTCTGGAGATCTTAGGCAATTGGGTCATGTTCCTGTTTCAGGAGGTGCTGTTTTTGATGCATCACAATATGCATTCTTTGGTAAAGATGCTGTCCAGGAAGTCGAGTTGGGAGGGTTAGAAGAGGACGCCCATTTGCCAACTTTTGAGTCTAATGAGGAGGAGTTCTTTTTTAATAGAGAACAGGATGAGGATGTGAGATCTCTTTCTGATATTGACGATCTTACAACCACCTTTTGGAAGTTGAACAAGGCTGTCAGTGGACCAAGAAACCCAGGTGTTATTGGTGAACGTGGATCCAGAGAAAATTCTACATCTGATCTGGCACAAAGAGACGATGTTCATAACTGGTTTGATCAGAATGCGTATGATAGTGAAGGTTCAATTGATGGAAAAAGATGGTCATCACAGCCCCAGTCTTCTCTTGCCCATTTACAAAATTCAAAGTCCTTGTACAGAACATCTTCATATCCTGAGCAGCTAAGGCAAGAGCAAAACTACCACCTCCAACATTGCTCTAGTGAGCCAGTTCACAACTGGCTTGATCAACATATTTATGATATTGAAACAGCTCATGATGACAAACGATGGTCATCTCAGCCGCATACCTCCATTCCACACTTGCACGAATCAACACCCTTGTACAGAACATCTTCATATCCCGACAAACAACAGGAGCTTACTCGTTTTTCTAGTGAGCCAATATTGGTACAGAAGTCTTCTTTCACTTCTTATCCTCCGCCGGGTGGTCGATCTCAACAGGGTTCTCCAAGTCATAGTACAGGCCACTTGAACATTCCATATCACACTGGAGCAGCAGCTCAGTTGGCACTATCATCTCAAAATCGACCACATTTCTCCAATTCTGCGCTACAGTTGAGTGGATTAAACCTTGGGTCACACTTTGGTGGAAACACACGACAATATCCTACTGGTTCCTCCCCTCTTAGTCAACGAATACAGAACCAATTGGTCAACCAAGCAGGGTTATATCCAGGAGATCGGTCCAACCTCCTTAGTAATATGCTGCAGCAACAACTACAGCTTCATAATGGATCAGTTTCTCCTCACTTGATGACTCAATTGCAACAGCAGCAGCATAGACTGCATCATCCTGTTCAGCAATCTGCAGGCTACTTGTCAGGTTTCCAGTCCCATTTATTTAATCCCCACCTTTCTCCTAGCTCATCCGTCAATAGCAAGTATGATCACAGACATAAATCAACTCAAAAAGGTAAACATAGTCATCGTTTATCACATCAGGGTTCTGATGCCAGTAGCCAAAAGAGTGAAAGCAGTTCATTACAATTTCGGTCCAAGCATATGACAAGTGATGAAATTGAGAGTATTCTTAGAATGCAGCTTGCTGTCACTCATAGTAATGATCCATACATAGATGACTATTACCACCAAGGTCGTCTTGCAAAAAAACCTTCTGTGGCCAAGTTAAAACATCCTTTCTGCCCAACCCAAATAAAGGAACTTCCTTCACGAACACGTTCCAGTAATGATCCTCATGCATTTCTTCAGGTTGATTCCCTAGGGAGGGTTTCATTTTCGTCTATTCGTCGGCCTCGCCCTCTTCTTGAGGCTGATTCTCCAAATTCTTCCATCCCTGGTAGCTCTGATTTAAAGATTTCAGAGAAGCCTCTAGAACAGGAGCCTACATTTGCTGCCAGAGTCACAATTGAGGACGGTCTTTGTCTTCTTCTTGATGTAGATGATATTGATCGTTTCCTACAGTCTAATCAGCCACAAGATGGTGGAACACAATTAAGACGAAGAAGGCAGGTCCTATTGGAAGGACTAGCTACTTCACTTCAACTGGTTGACCCGCTGGGGAAAAATGGGCACAAGGTTGGGCTTGCAGCTAAGGATGACCTTGTTTTCATAAGGATAGTATCTGTCCCTAAGGGACGCAAGCTCCTTGCGAAGTATCTTCAATTGCTTCTTCCTGGTAGTGACCTTATGCGGATAGTTTGCATGACCGTCCTTCGGCATTTAAGATTCTTATTTGGTGGTCTCCCCTCGGATCCAGCAGCTGCAGTGACTACATGCAACCTTGCCGAGGTTGTCTGCCAATGTATACGGGGAATGGATCTTGGTGCTCTTAGTGCCTGTCTTGCTGCAGTTGTTTGTTCTGCAGAGCATCCTCCTCTACGCCCTGTTGGAAGCACTGCTGGAGATGGTGCTTCCCTTATTTTGGTATCTGTTCTTGAGAGGGCTACCGAGCTTCTAACCGATCCACAAGCAGCCTGCAACTATAATATGGGTAATCGTTCCTTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTATTACTAAGTATTGCATGAATAAATACCACAGCATCATGCAGTCCCTCCTTATACAAAATGCACCAAATGTGGATGACATTGGATCAGATGCTGCTAAAGCAATTAGTAAGGAAATGCCTGTTGAACTCTTGCGTGCAAGCCTCCCTCACACTGATGACCACCAAAGGAAGTTATTGCTGGATTTCGCTCAGCGTTCTGTTCCCGTGATTGGATTTAACAGTAATGCTGGGGGAGTGGAGGTCTTGTGA
Protein sequence

>Msa0329960

MVDMDGFGGGGDLGGPPGSGDLRQLGHVPVSGGAVFDASQYAFFGKDAVQEVELGGLEEDAHLPTFESNEEEFFFNREQDEDVRSLSDIDDLTTTFWKLNKAVSGPRNPGVIGERGSRENSTSDLAQRDDVHNWFDQNAYDSEGSIDGKRWSSQPQSSLAHLQNSKSLYRTSSYPEQLRQEQNYHLQHCSSEPVHNWLDQHIYDIETAHDDKRWSSQPHTSIPHLHESTPLYRTSSYPDKQQELTRFSSEPILVQKSSFTSYPPPGGRSQQGSPSHSTGHLNIPYHTGAAAQLALSSQNRPHFSNSALQLSGLNLGSHFGGNTRQYPTGSSPLSQRIQNQLVNQAGLYPGDRSNLLSNMLQQQLQLHNGSVSPHLMTQLQQQQHRLHHPVQQSAGYLSGFQSHLFNPHLSPSSSVNSKYDHRHKSTQKGKHSHRLSHQGSDASSQKSESSSLQFRSKHMTSDEIESILRMQLAVTHSNDPYIDDYYHQGRLAKKPSVAKLKHPFCPTQIKELPSRTRSSNDPHAFLQVDSLGRVSFSSIRRPRPLLEADSPNSSIPGSSDLKISEKPLEQEPTFAARVTIEDGLCLLLDVDDIDRFLQSNQPQDGGTQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFIRIVSVPKGRKLLAKYLQLLLPGSDLMRIVCMTVLRHLRFLFGGLPSDPAAAVTTCNLAEVVCQCIRGMDLGALSACLAAVVCSAEHPPLRPVGSTAGDGASLILVSVLERATELLTDPQAACNYNMGNRSFWQASFDEFFGLITKYCMNKYHSIMQSLLIQNAPNVDDIGSDAAKAISKEMPVELLRASLPHTDDHQRKLLLDFAQRSVPVIGFNSNAGGVEVL*