AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1415720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1415720 MtrunA17_Chr2g0312131 96.250 880 11 1 1 858 1 880 0.0 1732
Msa1415720 MtrunA17_Chr8g0358191 66.553 882 251 13 4 858 1 865 0.0 1027
Msa1415720 MtrunA17_Chr2g0312151 61.432 866 247 16 21 857 17 824 0.0 958
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1415720 AT1G79090.2 45.339 869 351 19 4 835 1 782 0.0 633
Msa1415720 AT1G79090.1 45.339 869 351 19 4 835 1 782 0.0 633
Msa1415720 AT1G79090.3 45.339 869 351 19 4 835 1 782 0.0 633
Msa1415720 AT4G14990.1 43.721 860 351 19 34 856 22 785 0.0 601
Msa1415720 AT3G22270.1 47.971 690 292 14 196 856 129 780 0.0 577
Msa1415720 AT3G22270.1 45.238 168 68 8 35 194 24 175 2.36e-28 122
Msa1415720 AT4G14990.2 43.602 805 322 18 89 856 1 710 0.0 555

Find 246 sgRNAs with CRISPR-Local

Find 630 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGTCATGTTCCTGTTTC+AGG 0.132478 tig0024277:+482 Msa1415720:CDS
AGATGGTGCTTCCCTTATTT+TGG 0.157861 tig0024277:+7973 Msa1415720:CDS
CCAATAACACCTGGGTTTCT+TGG 0.199570 tig0024277:-5058 None:intergenic
AACCTATATCTCTACTTTCT+AGG 0.218300 tig0024277:+168 Msa1415720:five_prime_UTR
GTGAAGGAAGTTCCTTTATT+TGG 0.234831 tig0024277:-7260 None:intergenic
CTTGGTGGACCTCCTGGTTC+TGG 0.255118 tig0024277:+446 Msa1415720:CDS
ATGAACTGCTTTCACTCTTT+TGG 0.256404 tig0024277:-7071 None:intergenic
GCCTCATTTGATGAATTCTT+TGG 0.257973 tig0024277:+8082 Msa1415720:CDS
AAAGGTGGGGATTAAATAAA+TGG 0.261654 tig0024277:-6945 None:intergenic
AGCAGCCTGCAACTATAATA+TGG 0.261879 tig0024277:+8039 Msa1415720:CDS
CAAGAACAGATACCAAAATA+AGG 0.266560 tig0024277:-7985 None:intergenic
CAGCGTTCTGTTCCCGTGAT+TGG 0.272702 tig0024277:+8298 Msa1415720:CDS
TTAGCACATGGGGTTGGATT+TGG 0.283811 tig0024277:-218 None:intergenic
TCATGCAATACTTAGTAATA+AGG 0.284117 tig0024277:-8105 None:intergenic
CCAAGAAACCCAGGTGTTAT+TGG 0.287071 tig0024277:+5058 Msa1415720:CDS
AAAGCAGTTCATTACAATTT+CGG 0.293418 tig0024277:+7082 Msa1415720:CDS
CGGCATTTAAGATTCTTATT+TGG 0.294157 tig0024277:+7785 Msa1415720:CDS
AGGTTGTCTGCCAATGTATA+CGG 0.295191 tig0024277:+7858 Msa1415720:CDS
TTCTGGAGATCTTAGGCAAT+TGG 0.299001 tig0024277:+463 Msa1415720:CDS
GCATCACAATATGCATTCTT+TGG 0.300944 tig0024277:+1589 Msa1415720:CDS
TGAAGGAAGTTCCTTTATTT+GGG 0.308138 tig0024277:-7259 None:intergenic
CTACCAGGGATGGAAGAATT+TGG 0.312227 tig0024277:-7390 None:intergenic
GCCGGGTGGTCGATCTCAAC+AGG 0.318303 tig0024277:+6531 Msa1415720:CDS
TGATCCTCATGCATTTCTTC+AGG 0.318498 tig0024277:+7299 Msa1415720:CDS
ATGGTGGATATGGATGGTTT+TGG 0.320645 tig0024277:+410 Msa1415720:CDS
ACCCTCCCAACTCGACTTCC+TGG 0.325057 tig0024277:-1624 None:intergenic
CGCCCTGTTGGAAGCACTGC+TGG 0.336023 tig0024277:+7950 Msa1415720:CDS
GAAGACTTCTGTACCAATAT+TGG 0.339254 tig0024277:-6490 None:intergenic
AGACATAAATCAACTCAAAA+AGG 0.342250 tig0024277:+7003 Msa1415720:CDS
TGCTCTTGCCTTAGCTGCTC+AGG 0.346127 tig0024277:-6262 None:intergenic
GTTATAGAAGAAACGTTAAT+AGG 0.348594 tig0024277:-270 None:intergenic
GGTGATCTTGGTGGACCTCC+TGG 0.352995 tig0024277:+440 Msa1415720:CDS
ACGATCTTACAACCACCTTT+TGG 0.353378 tig0024277:+1896 Msa1415720:CDS
ACTGCTTTACTCACTTTCTC+TGG 0.362656 tig0024277:-5092 None:intergenic
ACTCAACTGTAGCGCAGAAT+TGG 0.363263 tig0024277:-6650 None:intergenic
TATCTTCAATTGCTTCTTCC+TGG 0.363691 tig0024277:+7725 Msa1415720:CDS
ATTACCCATATTATAGTTGC+AGG 0.364811 tig0024277:-8044 None:intergenic
TCTCCAGCAGTGCTTCCAAC+AGG 0.371729 tig0024277:-7953 None:intergenic
GCAAGGAGCTTGCGTCCCTT+AGG 0.374702 tig0024277:-7698 None:intergenic
ACCCTGCTTGGTTGACCAAT+TGG 0.375153 tig0024277:-6756 None:intergenic
TAGTCATCGTTTATCACATC+AGG 0.375229 tig0024277:+7032 Msa1415720:CDS
TAGCCTGCAGATTGCTGAAC+AGG 0.386467 tig0024277:-6904 None:intergenic
GCTGCTGCTCCAGTGTGATA+TGG 0.388425 tig0024277:-6589 None:intergenic
TTTCTGCCCAACCCAAATAA+AGG 0.389774 tig0024277:+7248 Msa1415720:CDS
AGGAGGTTGGACCGATCTCC+TGG 0.398000 tig0024277:-6784 None:intergenic
CATGTAGTCACTGCAGCTGC+TGG 0.399596 tig0024277:-7824 None:intergenic
ATATGGGTAATCGTTCCTTT+TGG 0.408815 tig0024277:+8056 Msa1415720:CDS
AAAGAGACGATGTTCATAAC+TGG 0.409081 tig0024277:+6119 Msa1415720:CDS
AAATGCATGAGGATCATTAC+TGG 0.409536 tig0024277:-7292 None:intergenic
CCACCAAAGGAAGTTATTGC+TGG 0.410035 tig0024277:+8267 Msa1415720:CDS
GATAGTGAAGGTTCAATTGA+TGG 0.416315 tig0024277:+6160 Msa1415720:CDS
CAAGGTTGGGCTTGCAGCTA+AGG 0.417819 tig0024277:+7643 Msa1415720:intron
TTTCTTCAGGTTGATTCCCT+AGG 0.418382 tig0024277:+7312 Msa1415720:CDS
TTCATCACTTGTCATATGCT+TGG 0.419448 tig0024277:-7106 None:intergenic
ACCCTAGAAAGTAGAGATAT+AGG 0.419474 tig0024277:-170 None:intergenic
TAGACTCAAAAGTTGGCAAA+TGG 0.420140 tig0024277:-1660 None:intergenic
CATTTAAGATTCTTATTTGG+TGG 0.421443 tig0024277:+7788 Msa1415720:CDS
ACCTATATCTCTACTTTCTA+GGG 0.422926 tig0024277:+169 Msa1415720:five_prime_UTR
AATCCAGCAATAACTTCCTT+TGG 0.424237 tig0024277:-8270 None:intergenic
ACAAACAACTGCAGCAAGAC+AGG 0.425389 tig0024277:-7906 None:intergenic
CAATCTGCAGGCTACTTGTC+AGG 0.426282 tig0024277:+6913 Msa1415720:CDS
GAAGTTCCTTTATTTGGGTT+GGG 0.427218 tig0024277:-7254 None:intergenic
CCTTTGGTGGTCATCAGTGT+GGG 0.429608 tig0024277:-8254 None:intergenic
CAACAACTACAGCTTCATAA+TGG 0.434498 tig0024277:+6823 Msa1415720:CDS
ATTGGATTTAACAGTAATGC+TGG 0.437304 tig0024277:+8316 Msa1415720:CDS
GGAAGTTCCTTTATTTGGGT+TGG 0.444412 tig0024277:-7255 None:intergenic
CTTGCACGCAAGAGTTCAAC+AGG 0.445560 tig0024277:-8226 None:intergenic
GATCCAATGTCATCCACATT+TGG 0.449177 tig0024277:-8172 None:intergenic
TTTCACTTCTTATCCTCCGC+CGG 0.449353 tig0024277:+6513 Msa1415720:CDS
GTAAGCTCCTGTTGTTTGTC+GGG 0.449579 tig0024277:-6451 None:intergenic
TTCAGAGAAGCCTCTAGAAC+AGG 0.453266 tig0024277:+7428 Msa1415720:CDS
CTCCTGGTTCTGGAGATCTT+AGG 0.453773 tig0024277:+456 Msa1415720:CDS
CAAGGAGCTTGCGTCCCTTA+GGG 0.453938 tig0024277:-7697 None:intergenic
AGTTGAGTGGATTAAACCTT+GGG 0.454503 tig0024277:+6665 Msa1415720:CDS
AAGAACAGATACCAAAATAA+GGG 0.457924 tig0024277:-7984 None:intergenic
TGTATACGGGGAATGGATCT+TGG 0.460378 tig0024277:+7872 Msa1415720:CDS
TTGCATCAGAAACCTGAAAC+AGG 0.461055 tig0024277:-494 None:intergenic
AACCAATTGGTCAACCAAGC+AGG 0.461811 tig0024277:+6754 Msa1415720:CDS
CTAGTGAGCCAGTTCACAAC+TGG 0.463433 tig0024277:+6308 Msa1415720:CDS
TCTGGAGATCTTAGGCAATT+GGG 0.465106 tig0024277:+464 Msa1415720:CDS
GAAAGGGGAAGATCTGTGAT+AGG 0.466355 tig0024277:-244 None:intergenic
TTCATATCCCGACAAACAAC+AGG 0.473230 tig0024277:+6444 Msa1415720:CDS
AACCTTGGGTCACACTTTGG+TGG 0.473373 tig0024277:+6679 Msa1415720:CDS
CTGGCTCACTAGAGCAATGT+TGG 0.473437 tig0024277:-6297 None:intergenic
CTTTGGTAAAGATGCTGTCC+AGG 0.474602 tig0024277:+1606 Msa1415720:CDS
TTAAACCTTGGGTCACACTT+TGG 0.475159 tig0024277:+6676 Msa1415720:CDS
TTCTGTATTCGTTGACTAAG+AGG 0.475936 tig0024277:-6733 None:intergenic
TTCTTCAGGTTGATTCCCTA+GGG 0.477004 tig0024277:+7313 Msa1415720:CDS
TAGTTTGCATGACCGTCCTT+CGG 0.479765 tig0024277:+7765 Msa1415720:CDS
CTTATTTGGTGGTCTCCCCT+CGG 0.481040 tig0024277:+7799 Msa1415720:CDS
GAAACGTTAATAGGAAGGAA+AGG 0.485371 tig0024277:-261 None:intergenic
AGTAAGCTCCTGTTGTTTGT+CGG 0.486049 tig0024277:-6452 None:intergenic
TTCACTTCTTATCCTCCGCC+GGG 0.486593 tig0024277:+6514 Msa1415720:CDS
TCCTTTGGTGGTCATCAGTG+TGG 0.486707 tig0024277:-8255 None:intergenic
CTGCCAATGTATACGGGGAA+TGG 0.488356 tig0024277:+7865 Msa1415720:CDS
GTAAATGGGCAAGAGAAGAC+TGG 0.491821 tig0024277:-6204 None:intergenic
TCCAGATTCTACATCTGATC+TGG 0.493925 tig0024277:+6093 Msa1415720:intron
TGCTGCTAAAGCAATTAGTA+AGG 0.494076 tig0024277:+8198 Msa1415720:CDS
AGACTCAAAAGTTGGCAAAT+GGG 0.495998 tig0024277:-1659 None:intergenic
CCAGCAATAACTTCCTTTGG+TGG 0.496773 tig0024277:-8267 None:intergenic
TCTCCAAATTCTTCCATCCC+TGG 0.497208 tig0024277:+7387 Msa1415720:CDS
TTTGGTATCTGTTCTTGAGA+GGG 0.497468 tig0024277:+7991 Msa1415720:CDS
ACTGCAGCTGCTGGATCCGA+GGG 0.497845 tig0024277:-7815 None:intergenic
TTTATTTGGGTTGGGCAGAA+AGG 0.497854 tig0024277:-7246 None:intergenic
GCAGCCTGCAACTATAATAT+GGG 0.498589 tig0024277:+8040 Msa1415720:CDS
TCAGGTTGATTCCCTAGGGA+GGG 0.499269 tig0024277:+7317 Msa1415720:CDS
CTTCATATCCTGAGCAGCTA+AGG 0.502424 tig0024277:+6254 Msa1415720:CDS
TGGTAATAGTCATCTATGTA+TGG 0.502833 tig0024277:-7177 None:intergenic
GGTTGTCTGCCAATGTATAC+GGG 0.505882 tig0024277:+7859 Msa1415720:CDS
GTTGGAAGCACTGCTGGAGA+TGG 0.505988 tig0024277:+7956 Msa1415720:CDS
GCTGTCCAGGAAGTCGAGTT+GGG 0.505992 tig0024277:+1619 Msa1415720:CDS
ATCAAATGAGGCCTGCCAAA+AGG 0.507360 tig0024277:-8071 None:intergenic
AATTGTGTTCCACCATCTTG+TGG 0.510161 tig0024277:-7543 None:intergenic
CCACGTTCACCAATAACACC+TGG 0.510228 tig0024277:-5067 None:intergenic
AAGGATAGTATCTGTCCCTA+AGG 0.510426 tig0024277:+7682 Msa1415720:CDS
TTATAGTTGCAGGCTGCTTG+TGG 0.511165 tig0024277:-8034 None:intergenic
AAACGTTAATAGGAAGGAAA+GGG 0.512191 tig0024277:-260 None:intergenic
CATCCTGTTCAGCAATCTGC+AGG 0.513845 tig0024277:+6901 Msa1415720:CDS
GTGATCATACTTGCTATTGA+CGG 0.514794 tig0024277:-6980 None:intergenic
ACCGTCCTCAATTGTGACTC+TGG 0.515769 tig0024277:-7466 None:intergenic
TGCTGTCCAGGAAGTCGAGT+TGG 0.516212 tig0024277:+1618 Msa1415720:CDS
AAGGTGGGGATTAAATAAAT+GGG 0.518012 tig0024277:-6944 None:intergenic
CATCCTCCTCTACGCCCTGT+TGG 0.518364 tig0024277:+7938 Msa1415720:CDS
AGGAATTTAGCACATGGGGT+TGG 0.518740 tig0024277:-224 None:intergenic
GTTGCTGCAGCATATTACTA+AGG 0.519246 tig0024277:-6804 None:intergenic
TCAACGAATACAGAACCAAT+TGG 0.519596 tig0024277:+6741 Msa1415720:CDS
AACCAAGCAGGGTTATATCC+AGG 0.519950 tig0024277:+6766 Msa1415720:CDS
TAGAAGAAACGTTAATAGGA+AGG 0.521888 tig0024277:-266 None:intergenic
GTGACTCTGGCAGCAAATGT+AGG 0.523060 tig0024277:-7453 None:intergenic
CCCTGTTGAGATCGACCACC+CGG 0.523910 tig0024277:-6532 None:intergenic
TCATGCAAACTATCCGCATA+AGG 0.523978 tig0024277:-7754 None:intergenic
TCTGTATTCGTTGACTAAGA+GGG 0.525367 tig0024277:-6732 None:intergenic
CACTGGAGCAGCAGCTCAGT+TGG 0.526269 tig0024277:+6597 Msa1415720:CDS
CTTGTGGCTGATTAGACTGT+AGG 0.526747 tig0024277:-7527 None:intergenic
ATCTTTAAATCAGAGCTACC+AGG 0.529960 tig0024277:-7405 None:intergenic
ACGAAAATGAAACCCTCCCT+AGG 0.531200 tig0024277:-7329 None:intergenic
TCCTCATTAGACTCAAAAGT+TGG 0.531442 tig0024277:-1667 None:intergenic
TTGTGGATCGGTTAGAAGCT+CGG 0.532013 tig0024277:-8017 None:intergenic
TGATCAAGCCAGTTGTGAAC+TGG 0.534986 tig0024277:-6316 None:intergenic
GCCAAAGAATTCATCAAATG+AGG 0.536456 tig0024277:-8083 None:intergenic
TATACAAAATGCACCAAATG+TGG 0.537033 tig0024277:+8159 Msa1415720:CDS
CAACATCCTTACCTTCCAAA+AGG 0.537944 tig0024277:-1911 None:intergenic
CAGCATATTACTAAGGAGGT+TGG 0.537947 tig0024277:-6797 None:intergenic
TTGGATTTAACAGTAATGCT+GGG 0.538008 tig0024277:+8317 Msa1415720:CDS
GGATGAGCTAGGAGAAAGGT+GGG 0.538219 tig0024277:-6959 None:intergenic
CACTGCAGCTGCTGGATCCG+AGG 0.538390 tig0024277:-7816 None:intergenic
CTTTGGTGGTCATCAGTGTG+GGG 0.542028 tig0024277:-8253 None:intergenic
CTCCTGGATATAACCCTGCT+TGG 0.542193 tig0024277:-6768 None:intergenic
TCGGCCTCGCCCTCTTCTTG+AGG 0.542370 tig0024277:+7359 Msa1415720:CDS
AATTCTGCGCTACAGTTGAG+TGG 0.543938 tig0024277:+6652 Msa1415720:CDS
TTCAGGTTGATTCCCTAGGG+AGG 0.544020 tig0024277:+7316 Msa1415720:CDS
TGCTGCCAGAGTCACAATTG+AGG 0.547539 tig0024277:+7461 Msa1415720:CDS
CACTAGAGCAATGTTGGAGG+TGG 0.548928 tig0024277:-6291 None:intergenic
GGGGATTAAATAAATGGGAC+TGG 0.549761 tig0024277:-6939 None:intergenic
CAGTTGAGTGGATTAAACCT+TGG 0.552867 tig0024277:+6664 Msa1415720:CDS
TAAATCAGAGCTACCAGGGA+TGG 0.558565 tig0024277:-7400 None:intergenic
GTTGCAGGCTGCTTGTGGAT+CGG 0.560942 tig0024277:-8029 None:intergenic
AACACACGACAATATCCTAC+TGG 0.561844 tig0024277:+6703 Msa1415720:CDS
ATTACTGTTAAATCCAATCA+CGG 0.565239 tig0024277:-8311 None:intergenic
TAAATGGGCAAGAGAAGACT+GGG 0.566055 tig0024277:-6203 None:intergenic
TGCCTAAGATCTCCAGAACC+AGG 0.566176 tig0024277:-458 None:intergenic
TTCCTGGTAGTGACCTTATG+CGG 0.567547 tig0024277:+7741 Msa1415720:CDS
ACAATTAAGACGAAGAAGGC+AGG 0.569275 tig0024277:+7560 Msa1415720:CDS
TCAGCCTCAAGAAGAGGGCG+AGG 0.570999 tig0024277:-7363 None:intergenic
TCCAGGAAGTCGAGTTGGGA+GGG 0.571151 tig0024277:+1623 Msa1415720:CDS
GTCCAGGAAGTCGAGTTGGG+AGG 0.571213 tig0024277:+1622 Msa1415720:CDS
AAGTGGCCTGTACTATGACT+TGG 0.575535 tig0024277:-6559 None:intergenic
TGAGATCGACCACCCGGCGG+AGG 0.575667 tig0024277:-6526 None:intergenic
ATATGAAGATGTTCTGTACA+AGG 0.577232 tig0024277:-6428 None:intergenic
ACCAATTGGTCAACCAAGCA+GGG 0.577462 tig0024277:+6755 Msa1415720:CDS
TTGCTATTGACGGATGAGCT+AGG 0.577997 tig0024277:-6970 None:intergenic
CAGTCTAATCAGCCACAAGA+TGG 0.578208 tig0024277:+7531 Msa1415720:CDS
TAGTTGAACAAGGCTGTCAG+TGG 0.579597 tig0024277:+5034 Msa1415720:intron
GCACCAAATGTGGATGACAT+TGG 0.580947 tig0024277:+8169 Msa1415720:CDS
CCAGGTGTTATTGGTGAACG+TGG 0.581152 tig0024277:+5067 Msa1415720:CDS
GCTCACTAGAGCAATGTTGG+AGG 0.581610 tig0024277:-6294 None:intergenic
AACGTTAATAGGAAGGAAAG+GGG 0.581790 tig0024277:-259 None:intergenic
CGAAAATGAAACCCTCCCTA+GGG 0.584674 tig0024277:-7328 None:intergenic
GAACACAATTAAGACGAAGA+AGG 0.590498 tig0024277:+7556 Msa1415720:CDS
GGTTCTCCAAGTCATAGTAC+AGG 0.591619 tig0024277:+6553 Msa1415720:CDS
GAGAATCAGCCTCAAGAAGA+GGG 0.592961 tig0024277:-7368 None:intergenic
TGACGGATGAGCTAGGAGAA+AGG 0.593268 tig0024277:-6963 None:intergenic
GATCCATTCCCCGTATACAT+TGG 0.595501 tig0024277:-7868 None:intergenic
CAGGGTTATATCCAGGAGAT+CGG 0.595838 tig0024277:+6773 Msa1415720:CDS
ATAAGAATCTTAAATGCCGA+AGG 0.597513 tig0024277:-7781 None:intergenic
CTCCAGCAGTGCTTCCAACA+GGG 0.598165 tig0024277:-7952 None:intergenic
CGGATGAGCTAGGAGAAAGG+TGG 0.598260 tig0024277:-6960 None:intergenic
TTTGGTGGTCATCAGTGTGG+GGG 0.599560 tig0024277:-8252 None:intergenic
TGGATTTAACAGTAATGCTG+GGG 0.602584 tig0024277:+8318 Msa1415720:CDS
TGATTCGTGCAAGTGTGGAA+TGG 0.603595 tig0024277:-6401 None:intergenic
ATATGAAGATGTTCTGTACA+AGG 0.605692 tig0024277:-6239 None:intergenic
GGTGTTGATTCGTGCAAGTG+TGG 0.608028 tig0024277:-6406 None:intergenic
TTCCACCAAAGTGTGACCCA+AGG 0.608336 tig0024277:-6681 None:intergenic
CTGTATTCGTTGACTAAGAG+GGG 0.609537 tig0024277:-6731 None:intergenic
GTGCTTCCAACAGGGCGTAG+AGG 0.609942 tig0024277:-7944 None:intergenic
CTTCCAACAGGGCGTAGAGG+AGG 0.610367 tig0024277:-7941 None:intergenic
GGAGAATCAGCCTCAAGAAG+AGG 0.611695 tig0024277:-7369 None:intergenic
GTCAGTGGACCAAGAAACCC+AGG 0.612755 tig0024277:+5049 Msa1415720:CDS
CCCACACTGATGACCACCAA+AGG 0.614049 tig0024277:+8254 Msa1415720:CDS
ATCCGCATAAGGTCACTACC+AGG 0.615411 tig0024277:-7743 None:intergenic
TGATAGGAATTTAGCACATG+GGG 0.615865 tig0024277:-228 None:intergenic
AATGTAGGCTCCTGTTCTAG+AGG 0.616073 tig0024277:-7438 None:intergenic
GTGATAGGAATTTAGCACAT+GGG 0.616172 tig0024277:-229 None:intergenic
GAATCTTAAATGCCGAAGGA+CGG 0.616530 tig0024277:-7777 None:intergenic
GCTGCAGCATATTACTAAGG+AGG 0.621104 tig0024277:-6801 None:intergenic
CATCCTTACCTTCCAAAAGG+TGG 0.621852 tig0024277:-1908 None:intergenic
CAGAATGCGTATGATAGTGA+AGG 0.623436 tig0024277:+6148 Msa1415720:CDS
TGGGGTTGGATTTGGATCAG+AGG 0.626210 tig0024277:-210 None:intergenic
CGAGTTGGGAGGGTTAGAAG+AGG 0.630131 tig0024277:+1633 Msa1415720:CDS
AGGATAGTATCTGTCCCTAA+GGG 0.631077 tig0024277:+7683 Msa1415720:CDS
AGTCATCGTTTATCACATCA+GGG 0.632224 tig0024277:+7033 Msa1415720:CDS
GCCAGAGTCACAATTGAGGA+CGG 0.634189 tig0024277:+7465 Msa1415720:CDS
CACGTTCACCAATAACACCT+GGG 0.634807 tig0024277:-5066 None:intergenic
TTACTGTTAAATCCAATCAC+GGG 0.636315 tig0024277:-8310 None:intergenic
TCTAATCAGCCACAAGATGG+TGG 0.638420 tig0024277:+7534 Msa1415720:CDS
GGATTTAACAGTAATGCTGG+GGG 0.646866 tig0024277:+8319 Msa1415720:CDS
CCGGGTGGTCGATCTCAACA+GGG 0.647254 tig0024277:+6532 Msa1415720:CDS
GACTACATGCAACCTTGCCG+AGG 0.648938 tig0024277:+7838 Msa1415720:CDS
GCAATTGAAGATACTTCGCA+AGG 0.650941 tig0024277:-7715 None:intergenic
TCAACCTGAAGAAATGCATG+AGG 0.652261 tig0024277:-7303 None:intergenic
TGCAATTGAGTCATCAAGTG+AGG 0.653732 tig0024277:-6856 None:intergenic
AGCGCAGAATTGGAGAAATG+TGG 0.654529 tig0024277:-6640 None:intergenic
ATACTATCCTTATGAAAACA+AGG 0.654648 tig0024277:-7670 None:intergenic
ACTTCTTATCCTCCGCCGGG+TGG 0.654695 tig0024277:+6517 Msa1415720:CDS
TGTGATAGGAATTTAGCACA+TGG 0.657917 tig0024277:-230 None:intergenic
ATTGGCAGACAACCTCGGCA+AGG 0.658718 tig0024277:-7850 None:intergenic
TATACATTGGCAGACAACCT+CGG 0.660598 tig0024277:-7855 None:intergenic
TTACTGGAACGTGTTCGTGA+AGG 0.662370 tig0024277:-7276 None:intergenic
TATGAAGATGTTCTGTACAA+GGG 0.667003 tig0024277:-6427 None:intergenic
GGAGGGACTGCATGATGCTG+TGG 0.671070 tig0024277:-8135 None:intergenic
CTAAGAGGGGAGGAACCAGT+AGG 0.676397 tig0024277:-6718 None:intergenic
TCTTTAAATCAGAGCTACCA+GGG 0.677000 tig0024277:-7404 None:intergenic
TTGAACATTCCATATCACAC+TGG 0.678952 tig0024277:+6580 Msa1415720:CDS
TTCGTGCAAGTGTGGAATGG+AGG 0.692522 tig0024277:-6398 None:intergenic
TATTCGTTGACTAAGAGGGG+AGG 0.698688 tig0024277:-6728 None:intergenic
CTGCAGCTGCTGGATCCGAG+GGG 0.699120 tig0024277:-7814 None:intergenic
TGTGATATGGAATGTTCAAG+TGG 0.701817 tig0024277:-6576 None:intergenic
CAGCTCATGATGACAAACGA+TGG 0.714656 tig0024277:+6359 Msa1415720:CDS
GATGAGCTAGGAGAAAGGTG+GGG 0.715172 tig0024277:-6958 None:intergenic
GTTGTCTGCCAATGTATACG+GGG 0.721058 tig0024277:+7860 Msa1415720:CDS
AAGTGTGGAATGGAGGTATG+CGG 0.728702 tig0024277:-6391 None:intergenic
GATTTAACAGTAATGCTGGG+GGG 0.734255 tig0024277:+8320 Msa1415720:CDS
ATAGATGACTATTACCACCA+AGG 0.739114 tig0024277:+7183 Msa1415720:CDS
CTAAGATCTCCAGAACCAGG+AGG 0.756897 tig0024277:-455 None:intergenic
TGTTGAGATCGACCACCCGG+CGG 0.777403 tig0024277:-6529 None:intergenic
AAATGGGCAAGAGAAGACTG+GGG 0.800097 tig0024277:-6202 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATTATTTATTTTTTT+TGG + tig0024277:1419-1438 Msa1415720:intron 0.0%
!!! TATTATTATTTATTTTTTTT+GGG + tig0024277:1420-1439 Msa1415720:intron 0.0%
!!! TTTTAATTCTTTTGTTTAAT+TGG + tig0024277:520-539 Msa1415720:intron 10.0%
!!! TTATTTAATTTGAGTTTTTT+TGG + tig0024277:603-622 Msa1415720:intron 10.0%
!! AGATAAAATTATTATTTATG+TGG + tig0024277:1383-1402 Msa1415720:intron 10.0%
!! TATTATTATTATTCAATTGT+TGG - tig0024277:2883-2902 None:intergenic 10.0%
!! AAAGTTATTATCTATTTCAT+AGG + tig0024277:1344-1363 Msa1415720:intron 15.0%
!!! TTATTTATTTTTTTTGGGTT+TGG + tig0024277:1425-1444 Msa1415720:intron 15.0%
!!! TTTAAGTAATTCTAAGAATT+TGG + tig0024277:1516-1535 Msa1415720:intron 15.0%
!! AAAAACATCATAAAAAAACA+CGG + tig0024277:2582-2601 Msa1415720:intron 15.0%
!! TATAAATTTAGATTATCCTT+AGG + tig0024277:3056-3075 Msa1415720:intron 15.0%
!! TAAATGTAAATATTCAAAAG+CGG + tig0024277:3450-3469 Msa1415720:intron 15.0%
!!! TATGTTATTTATAAAGTGAT+TGG + tig0024277:3639-3658 Msa1415720:intron 15.0%
!!! ATTTGTATTTTTATTTGATG+TGG - tig0024277:4302-4321 None:intergenic 15.0%
!! ACATCAAATAAAAATACAAA+TGG + tig0024277:4301-4320 Msa1415720:intron 15.0%
!! CAAACATATTTGAATATTAT+TGG + tig0024277:4760-4779 Msa1415720:intron 15.0%
!! AAAAAAACTTAGTATTCATA+TGG - tig0024277:4992-5011 None:intergenic 15.0%
!! AAATAAATTATGTCAAATTC+TGG + tig0024277:5151-5170 Msa1415720:intron 15.0%
!!! TTGAGTTTTTTTGGTATAAT+TGG + tig0024277:612-631 Msa1415720:intron 20.0%
!! TCATTAATCAGTCATAAATA+AGG - tig0024277:1061-1080 None:intergenic 20.0%
!! CTTACTCTTATGTATAATTT+AGG + tig0024277:1143-1162 Msa1415720:intron 20.0%
!! AATTTAGAAGATATTGTTGT+GGG - tig0024277:1265-1284 None:intergenic 20.0%
!! AAATTTAGAAGATATTGTTG+TGG - tig0024277:1266-1285 None:intergenic 20.0%
!!! TTACTTAAAATGAAAAGTAC+AGG - tig0024277:1505-1524 None:intergenic 20.0%
!! AAACATTACATCAATCATAT+AGG - tig0024277:2090-2109 None:intergenic 20.0%
!!! AACAAATGAATTTGAAATCA+TGG - tig0024277:2193-2212 None:intergenic 20.0%
!!! TTTATGTTTAGTTGCATTTT+AGG + tig0024277:2420-2439 Msa1415720:intron 20.0%
!! GTTTGATATTTATGTAGATT+GGG - tig0024277:2560-2579 None:intergenic 20.0%
!! AGTTTGATATTTATGTAGAT+TGG - tig0024277:2561-2580 None:intergenic 20.0%
!! AAAACATCATAAAAAAACAC+GGG + tig0024277:2583-2602 Msa1415720:intron 20.0%
!!! ATAAGCAAAGATTCATTTTA+AGG + tig0024277:2731-2750 Msa1415720:intron 20.0%
!! ATAATATAGACCAAATACAT+CGG - tig0024277:2769-2788 None:intergenic 20.0%
!! CATTGAATAAATGATATATC+TGG - tig0024277:2795-2814 None:intergenic 20.0%
!!! AAGCAAAAAAATCACTTTTA+AGG - tig0024277:2820-2839 None:intergenic 20.0%
!!! CTTTTTTTATGAAAAAGACA+GGG - tig0024277:3324-3343 None:intergenic 20.0%
!! TTTATATTCTTGTCTTACAT+TGG + tig0024277:3583-3602 Msa1415720:intron 20.0%
!! ATAACATAATAGCATAAAAC+AGG - tig0024277:3627-3646 None:intergenic 20.0%
!! CAAAACTTCATGAAAAATAT+TGG - tig0024277:3699-3718 None:intergenic 20.0%
!!! ATATTTTTCATGAAGTTTTG+CGG + tig0024277:3699-3718 Msa1415720:intron 20.0%
!!! AGGACTTGTTTTTTTTTTTT+GGG - tig0024277:3822-3841 None:intergenic 20.0%
!!! AAGGACTTGTTTTTTTTTTT+TGG - tig0024277:3823-3842 None:intergenic 20.0%
!! GAAATACCTTAAATAAGATA+TGG + tig0024277:4118-4137 Msa1415720:intron 20.0%
!!! TAAATCAGTTTTTTATTCTG+CGG - tig0024277:4146-4165 None:intergenic 20.0%
!! TTTCTTTATCTTCTCAATTT+GGG - tig0024277:4254-4273 None:intergenic 20.0%
!! ATTTCTTTATCTTCTCAATT+TGG - tig0024277:4255-4274 None:intergenic 20.0%
!!! TGCGTAATTTTTTTTATCTT+TGG + tig0024277:4520-4539 Msa1415720:intron 20.0%
!! ACCTATAAAAGAAAAACAAA+AGG + tig0024277:4678-4697 Msa1415720:intron 20.0%
!!! TCCTTTTGTTTTTCTTTTAT+AGG - tig0024277:4682-4701 None:intergenic 20.0%
!! AAATATCAAACAACTAACTT+TGG - tig0024277:4813-4832 None:intergenic 20.0%
!! AAATATCAAACAACTAACTT+TGG - tig0024277:4813-4832 None:intergenic 20.0%
!!! AATTTGATTTTAGTTGAACA+AGG + tig0024277:5024-5043 Msa1415720:intron 20.0%
!!! ATTTAATATTTTGAGTGAAC+AGG + tig0024277:5192-5211 Msa1415720:intron 20.0%
!!! TTAAATTCATGCATTGATAT+GGG + tig0024277:5405-5424 Msa1415720:intron 20.0%
!! AAATATCAGTTAGAAATCTT+AGG - tig0024277:5600-5619 None:intergenic 20.0%
!! TAACCTCATCTTAAAATATT+CGG - tig0024277:5936-5955 None:intergenic 20.0%
! GTTATAGAAGAAACGTTAAT+AGG - tig0024277:273-292 None:intergenic 25.0%
! GAAAAAAGATTGAAACTTTG+AGG - tig0024277:299-318 None:intergenic 25.0%
!!! TTTGTGTTGTTTAATTCATC+TGG + tig0024277:551-570 Msa1415720:intron 25.0%
!!! TTGTGTTGTTTAATTCATCT+GGG + tig0024277:552-571 Msa1415720:intron 25.0%
!! GAATTATTGTTGTGATGTTT+TGG + tig0024277:750-769 Msa1415720:intron 25.0%
! TAAACATTTGTATGTCTGTT+TGG - tig0024277:1001-1020 None:intergenic 25.0%
! AAAAATCGATAATAGACCAA+TGG - tig0024277:1318-1337 None:intergenic 25.0%
!!! TTTATTTTTTTTGGGTTTGG+TGG + tig0024277:1428-1447 Msa1415720:intron 25.0%
!!! TTATTTTTTTTGGGTTTGGT+GGG + tig0024277:1429-1448 Msa1415720:intron 25.0%
!!! GTTCTTTTTTAATAGAGAAC+AGG + tig0024277:1693-1712 Msa1415720:CDS 25.0%
!! GAATTTGAAATCATGGAAAA+CGG - tig0024277:2186-2205 None:intergenic 25.0%
!!! AAAAGCATAATGTTTTCATG+TGG - tig0024277:2488-2507 None:intergenic 25.0%
!! CATGAAAACATTATGCTTTT+AGG + tig0024277:2488-2507 Msa1415720:intron 25.0%
! TTAACGGAGAAGATAAAATT+TGG + tig0024277:2524-2543 Msa1415720:intron 25.0%
! TAACGGAGAAGATAAAATTT+GGG + tig0024277:2525-2544 Msa1415720:intron 25.0%
!!! TTTTTGCTTTAAATAGTGAC+CGG + tig0024277:2831-2850 Msa1415720:intron 25.0%
! TTACTAAATAATACTTCCTC+CGG - tig0024277:2853-2872 None:intergenic 25.0%
!!! GCTGATTCTTTTACTAAATT+TGG + tig0024277:3178-3197 Msa1415720:intron 25.0%
!!! CCTTTTTTTATGAAAAAGAC+AGG - tig0024277:3325-3344 None:intergenic 25.0%
!!! CCTGTCTTTTTCATAAAAAA+AGG + tig0024277:3322-3341 Msa1415720:intron 25.0%
!! CTTCATGAAAAATATTGGTT+GGG - tig0024277:3694-3713 None:intergenic 25.0%
! ACTTCATGAAAAATATTGGT+TGG - tig0024277:3695-3714 None:intergenic 25.0%
! AACAAATAGCTTAAGCTTTA+GGG - tig0024277:3744-3763 None:intergenic 25.0%
! TAACAAATAGCTTAAGCTTT+AGG - tig0024277:3745-3764 None:intergenic 25.0%
!! TAAGCTATTTGTTAAATGCA+TGG + tig0024277:3751-3770 Msa1415720:intron 25.0%
!! AAGCTATTTGTTAAATGCAT+GGG + tig0024277:3752-3771 Msa1415720:intron 25.0%
! ATCTAAGTATGTTTCATAGA+AGG + tig0024277:4022-4041 Msa1415720:intron 25.0%
!! TTTTACTGAAAAACACAGTT+TGG + tig0024277:4399-4418 Msa1415720:intron 25.0%
! TTTACTGAAAAACACAGTTT+GGG + tig0024277:4400-4419 Msa1415720:intron 25.0%
! AATTCCAAAATTGCACATAT+AGG - tig0024277:4892-4911 None:intergenic 25.0%
! ATGTTTACTTCTATTCTTAG+AGG + tig0024277:5312-5331 Msa1415720:intron 25.0%
!!! TGACATGTTTTTAGTAATGT+GGG - tig0024277:5383-5402 None:intergenic 25.0%
!! GTTAAATTCATGCATTGATA+TGG + tig0024277:5404-5423 Msa1415720:intron 25.0%
! ATACATCCTTTAAGTCAAAA+TGG - tig0024277:5504-5523 None:intergenic 25.0%
!! AGTTATTGTAGTTTGCAAAT+TGG - tig0024277:5530-5549 None:intergenic 25.0%
! TACAGTAATCAATAAACTTG+TGG - tig0024277:5689-5708 None:intergenic 25.0%
!! CAAGTTTATTGATTACTGTA+CGG + tig0024277:5689-5708 Msa1415720:intron 25.0%
! AGTCATAAAACTAATGATTG+AGG + tig0024277:5811-5830 Msa1415720:intron 25.0%
!! CTCTAGTATAATGATTTTTC+AGG + tig0024277:5882-5901 Msa1415720:intron 25.0%
!! GGACTTTGAATTTTGTAAAT+GGG - tig0024277:6221-6240 None:intergenic 25.0%
!! AGGACTTTGAATTTTGTAAA+TGG - tig0024277:6222-6241 None:intergenic 25.0%
! AGACATAAATCAACTCAAAA+AGG + tig0024277:7003-7022 Msa1415720:CDS 25.0%
! AAAGCAGTTCATTACAATTT+CGG + tig0024277:7082-7101 Msa1415720:CDS 25.0%
! ATACTATCCTTATGAAAACA+AGG - tig0024277:7673-7692 None:intergenic 25.0%
!! CATTTAAGATTCTTATTTGG+TGG + tig0024277:7788-7807 Msa1415720:CDS 25.0%
! AAGAACAGATACCAAAATAA+GGG - tig0024277:7987-8006 None:intergenic 25.0%
! TCATGCAATACTTAGTAATA+AGG - tig0024277:8108-8127 None:intergenic 25.0%
! ATTACTGTTAAATCCAATCA+CGG - tig0024277:8314-8333 None:intergenic 25.0%
AACCTATATCTCTACTTTCT+AGG + tig0024277:168-187 Msa1415720:five_prime_UTR 30.0%
ACCTATATCTCTACTTTCTA+GGG + tig0024277:169-188 Msa1415720:five_prime_UTR 30.0%
AAACGTTAATAGGAAGGAAA+GGG - tig0024277:263-282 None:intergenic 30.0%
TAGAAGAAACGTTAATAGGA+AGG - tig0024277:269-288 None:intergenic 30.0%
ACAAGCACTTACTATATAAG+TGG + tig0024277:823-842 Msa1415720:intron 30.0%
!! CTTATTTCTATTAGCTCTCT+AGG - tig0024277:932-951 None:intergenic 30.0%
TATTTCATAGGCTTTACATG+TGG + tig0024277:1356-1375 Msa1415720:intron 30.0%
!! TGATGATGTTTTTGTTATGC+AGG + tig0024277:1550-1569 Msa1415720:intron 30.0%
ATATGTGAATCGCATAAGAA+AGG - tig0024277:1800-1819 None:intergenic 30.0%
TCTTATGCGATTCACATATA+TGG + tig0024277:1801-1820 Msa1415720:intron 30.0%
! TATCACACTTTTCTGTATTC+TGG + tig0024277:1943-1962 Msa1415720:intron 30.0%
ACATCAATCATATAGGAAGT+AGG - tig0024277:2083-2102 None:intergenic 30.0%
! TAATGTTTTCATGTGGACAA+GGG - tig0024277:2481-2500 None:intergenic 30.0%
! ATAATGTTTTCATGTGGACA+AGG - tig0024277:2482-2501 None:intergenic 30.0%
!! AAAAAAAGTATTACTCCCTC+CGG + tig0024277:2700-2719 Msa1415720:intron 30.0%
TCTTTGCTTATAATAGTGAC+CGG - tig0024277:2722-2741 None:intergenic 30.0%
CATTGAATAACCGATGTATT+TGG + tig0024277:2756-2775 Msa1415720:intron 30.0%
TATTAAGCTTTCCCGTTATA+AGG + tig0024277:3123-3142 Msa1415720:intron 30.0%
!! AAATGACTCTAAAAGCATCT+AGG - tig0024277:3280-3299 None:intergenic 30.0%
! AGTCATTTGTGTTTCTGTTT+GGG + tig0024277:3292-3311 Msa1415720:intron 30.0%
AAGTGATTGGCATTTATTCT+TGG + tig0024277:3652-3671 Msa1415720:intron 30.0%
AGTGATTGGCATTTATTCTT+GGG + tig0024277:3653-3672 Msa1415720:intron 30.0%
! ACAAATAGCTTAAGCTTTAG+GGG - tig0024277:3743-3762 None:intergenic 30.0%
!! ATGCTATAAGAGGTATTATC+GGG - tig0024277:3989-4008 None:intergenic 30.0%
!! GATGCTATAAGAGGTATTAT+CGG - tig0024277:3990-4009 None:intergenic 30.0%
AAGTATGTTTCATAGAAGGA+TGG + tig0024277:4026-4045 Msa1415720:intron 30.0%
TGGGGATAAAAAATAAGGAA+CGG - tig0024277:4054-4073 None:intergenic 30.0%
!!! TCCTTATTTTTTATCCCCAT+TGG + tig0024277:4055-4074 Msa1415720:intron 30.0%
TCCAATGGGGATAAAAAATA+AGG - tig0024277:4059-4078 None:intergenic 30.0%
!!! TTATTTTTTATCCCCATTGG+AGG + tig0024277:4058-4077 Msa1415720:intron 30.0%
!! TTCTTTTTATGGTTGGTTGA+AGG - tig0024277:4181-4200 None:intergenic 30.0%
TTCAACCAACCATAAAAAGA+AGG + tig0024277:4180-4199 Msa1415720:intron 30.0%
TCAACCAACCATAAAAAGAA+GGG + tig0024277:4181-4200 Msa1415720:intron 30.0%
! ATGTGTGTAATTGTGTTTTC+TGG - tig0024277:4226-4245 None:intergenic 30.0%
!!! TTGTGTGTTTTAGAGAAAGA+AGG + tig0024277:4424-4443 Msa1415720:intron 30.0%
!!! TGTTTTAGAGAAAGAAGGAT+TGG + tig0024277:4429-4448 Msa1415720:intron 30.0%
!! TTTTGAGTGAACAGGAAAAT+TGG + tig0024277:5200-5219 Msa1415720:intron 30.0%
TTGTAACACATCAGTCAAAA+TGG + tig0024277:5285-5304 Msa1415720:intron 30.0%
ATGACATGTTAAACGAACAT+GGG + tig0024277:5342-5361 Msa1415720:intron 30.0%
TTTAGTAATGTGGGATCTAT+GGG - tig0024277:5374-5393 None:intergenic 30.0%
! TTTTAGTAATGTGGGATCTA+TGG - tig0024277:5375-5394 None:intergenic 30.0%
!!! GTGACATGTTTTTAGTAATG+TGG - tig0024277:5384-5403 None:intergenic 30.0%
ATCAGAGATTCAGAGTATAA+TGG - tig0024277:5625-5644 None:intergenic 30.0%
!!! TTACTGTACGGTTTTTAAGT+AGG + tig0024277:5701-5720 Msa1415720:intron 30.0%
AACTTTCTCTACTCAAGAAA+AGG + tig0024277:5725-5744 Msa1415720:intron 30.0%
! TTTTATGACTACTTGATGCA+TGG - tig0024277:5801-5820 None:intergenic 30.0%
TAAAACTAATGATTGAGGAG+AGG + tig0024277:5816-5835 Msa1415720:intron 30.0%
! TTTAAGATCATTCATCTGAG+AGG + tig0024277:5855-5874 Msa1415720:intron 30.0%
!!! GTATAATGATTTTTCAGGTC+TGG + tig0024277:5887-5906 Msa1415720:intron 30.0%
!!! CATCCGAATATTTTAAGATG+AGG + tig0024277:5930-5949 Msa1415720:intron 30.0%
TCAAAGGGACTATATAATGT+TGG + tig0024277:5970-5989 Msa1415720:intron 30.0%
CAAAGGGACTATATAATGTT+GGG + tig0024277:5971-5990 Msa1415720:intron 30.0%
GTTCAATTGATGGAAAAAGA+TGG + tig0024277:6170-6189 Msa1415720:CDS 30.0%
ATATGAAGATGTTCTGTACA+AGG - tig0024277:6242-6261 None:intergenic 30.0%
TATGAAGATGTTCTGTACAA+GGG - tig0024277:6241-6260 None:intergenic 30.0%
ATATGAAGATGTTCTGTACA+AGG - tig0024277:6242-6261 None:intergenic 30.0%
!! TTTTTCTAGTGAGCCAATAT+TGG + tig0024277:6477-6496 Msa1415720:CDS 30.0%
AAGGTGGGGATTAAATAAAT+GGG - tig0024277:6947-6966 None:intergenic 30.0%
AAAGGTGGGGATTAAATAAA+TGG - tig0024277:6948-6967 None:intergenic 30.0%
TGGTAATAGTCATCTATGTA+TGG - tig0024277:7180-7199 None:intergenic 30.0%
! TGAAGGAAGTTCCTTTATTT+GGG - tig0024277:7262-7281 None:intergenic 30.0%
! TTTCATTTTCGTCTATTCGT+CGG + tig0024277:7340-7359 Msa1415720:CDS 30.0%
ATAAGAATCTTAAATGCCGA+AGG - tig0024277:7784-7803 None:intergenic 30.0%
! CGGCATTTAAGATTCTTATT+TGG + tig0024277:7785-7804 Msa1415720:CDS 30.0%
CAAGAACAGATACCAAAATA+AGG - tig0024277:7988-8007 None:intergenic 30.0%
ATTACCCATATTATAGTTGC+AGG - tig0024277:8047-8066 None:intergenic 30.0%
!!! CATTTGGTGCATTTTGTATA+AGG - tig0024277:8159-8178 None:intergenic 30.0%
TATACAAAATGCACCAAATG+TGG + tig0024277:8159-8178 Msa1415720:CDS 30.0%
TTACTGTTAAATCCAATCAC+GGG - tig0024277:8313-8332 None:intergenic 30.0%
ATTGGATTTAACAGTAATGC+TGG + tig0024277:8316-8335 Msa1415720:CDS 30.0%
TTGGATTTAACAGTAATGCT+GGG + tig0024277:8317-8336 Msa1415720:CDS 30.0%
ACCCTAGAAAGTAGAGATAT+AGG - tig0024277:173-192 None:intergenic 35.0%
TGATAGGAATTTAGCACATG+GGG - tig0024277:231-250 None:intergenic 35.0%
GTGATAGGAATTTAGCACAT+GGG - tig0024277:232-251 None:intergenic 35.0%
TGTGATAGGAATTTAGCACA+TGG - tig0024277:233-252 None:intergenic 35.0%
AACGTTAATAGGAAGGAAAG+GGG - tig0024277:262-281 None:intergenic 35.0%
GAAACGTTAATAGGAAGGAA+AGG - tig0024277:264-283 None:intergenic 35.0%
! TTCAGCGTTTTTCATCTCAA+AGG + tig0024277:357-376 Msa1415720:five_prime_UTR 35.0%
! TCAGCGTTTTTCATCTCAAA+GGG + tig0024277:358-377 Msa1415720:five_prime_UTR 35.0%
!! CAATCACTCCTTCGTTTTTA+TGG + tig0024277:391-410 Msa1415720:exon 35.0%
CATATCCACCATAAAAACGA+AGG - tig0024277:402-421 None:intergenic 35.0%
!!! CTTCGTTTTTATGGTGGATA+TGG + tig0024277:400-419 Msa1415720:exon 35.0%
!!! GTTTTTATGGTGGATATGGA+TGG + tig0024277:404-423 Msa1415720:exon 35.0%
AGTGCTTGTTCATACAAACA+GGG - tig0024277:812-831 None:intergenic 35.0%
AAGTGCTTGTTCATACAAAC+AGG - tig0024277:813-832 None:intergenic 35.0%
CTCTAATAAGCTAATCCAAC+AGG + tig0024277:1035-1054 Msa1415720:intron 35.0%
!!! GATTTTTTGCATCTGTGTGT+TGG + tig0024277:1079-1098 Msa1415720:intron 35.0%
CGTATTGTTTGTACTTCCAT+TGG + tig0024277:1299-1318 Msa1415720:intron 35.0%
!! TGATGTTTTTGTTATGCAGG+AGG + tig0024277:1553-1572 Msa1415720:intron 35.0%
GCATCACAATATGCATTCTT+TGG + tig0024277:1589-1608 Msa1415720:CDS 35.0%
AGACTCAAAAGTTGGCAAAT+GGG - tig0024277:1662-1681 None:intergenic 35.0%
TAGACTCAAAAGTTGGCAAA+TGG - tig0024277:1663-1682 None:intergenic 35.0%
TCCTCATTAGACTCAAAAGT+TGG - tig0024277:1670-1689 None:intergenic 35.0%
!! AACTTTTGAGTCTAATGAGG+AGG + tig0024277:1669-1688 Msa1415720:CDS 35.0%
TCGCATAAGAAAGGAAAAGA+GGG - tig0024277:1791-1810 None:intergenic 35.0%
ATCGCATAAGAAAGGAAAAG+AGG - tig0024277:1792-1811 None:intergenic 35.0%
AAAGTTTCTCAGTTTCCATG+AGG + tig0024277:2219-2238 Msa1415720:intron 35.0%
TCTCTCATAGTTGACAAATC+TGG - tig0024277:2273-2292 None:intergenic 35.0%
!!! TGCTTTTAGGTTTAGCTACT+AGG + tig0024277:2501-2520 Msa1415720:intron 35.0%
AGGTTTAGCTACTAGGTTAA+CGG + tig0024277:2508-2527 Msa1415720:intron 35.0%
AGATAAAATTTGGGCCCTTA+AGG + tig0024277:2534-2553 Msa1415720:intron 35.0%
TTATGTAGATTGGGCCTTAA+GGG - tig0024277:2551-2570 None:intergenic 35.0%
TTTATGTAGATTGGGCCTTA+AGG - tig0024277:2552-2571 None:intergenic 35.0%
! TAAATGCCCAAGGTATTCAA+AGG - tig0024277:2609-2628 None:intergenic 35.0%
ATACCTTGGGCATTTAGAAA+AGG + tig0024277:2613-2632 Msa1415720:intron 35.0%
GAAAAGGCAATAGTAGTTAC+TGG + tig0024277:2629-2648 Msa1415720:intron 35.0%
AAGGCAAGAGAGGAAAAATT+AGG - tig0024277:3229-3248 None:intergenic 35.0%
AGAATTTCAATCTGCCAACA+AGG - tig0024277:3248-3267 None:intergenic 35.0%
! GAGTCATTTGTGTTTCTGTT+TGG + tig0024277:3291-3310 Msa1415720:intron 35.0%
! GTCATTTGTGTTTCTGTTTG+GGG + tig0024277:3293-3312 Msa1415720:intron 35.0%
TGGGATCGACAACTATATTT+GGG + tig0024277:3524-3543 Msa1415720:intron 35.0%
ATTCTTGTCTTACATTGGTC+AGG + tig0024277:3588-3607 Msa1415720:intron 35.0%
! TGAAAAATATTGGTTGGGTC+AGG - tig0024277:3689-3708 None:intergenic 35.0%
! ATGCTACTTGATGTTTGACT+TGG + tig0024277:3792-3811 Msa1415720:intron 35.0%
! TGCTACTTGATGTTTGACTT+GGG + tig0024277:3793-3812 Msa1415720:intron 35.0%
GGGGATAAAAAATAAGGAAC+GGG - tig0024277:4053-4072 None:intergenic 35.0%
! GCGGTACCATATCTTATTTA+AGG - tig0024277:4127-4146 None:intergenic 35.0%
CAACCAACCATAAAAAGAAG+GGG + tig0024277:4182-4201 Msa1415720:intron 35.0%
AACCAACCATAAAAAGAAGG+GGG + tig0024277:4183-4202 Msa1415720:intron 35.0%
ATGGCTGAAAAAATGTGAGA+TGG + tig0024277:4320-4339 Msa1415720:intron 35.0%
GCATTCATTGCTGAGAAAAT+AGG - tig0024277:4571-4590 None:intergenic 35.0%
AGGAATTAAATTCCCAGGAA+AGG - tig0024277:4616-4635 None:intergenic 35.0%
TCCTGGGAATTTAATTCCTA+TGG + tig0024277:4617-4636 Msa1415720:intron 35.0%
ACCATAGGAATTAAATTCCC+AGG - tig0024277:4621-4640 None:intergenic 35.0%
AACTTAGCATTAGCAACCAT+AGG - tig0024277:4636-4655 None:intergenic 35.0%
!! TCTGATTAGCTTGCTTTCTT+AGG + tig0024277:4732-4751 Msa1415720:intron 35.0%
! GCTACCTATATGTGCAATTT+TGG + tig0024277:4885-4904 Msa1415720:intron 35.0%
AGTCCTTGAATTTAGCGAAA+CGG + tig0024277:5245-5264 Msa1415720:intron 35.0%
TTTCCGTTTCGCTAAATTCA+AGG - tig0024277:5251-5270 None:intergenic 35.0%
TCGTTTAACATGTCATGTCT+TGG - tig0024277:5338-5357 None:intergenic 35.0%
CATGACATGTTAAACGAACA+TGG + tig0024277:5341-5360 Msa1415720:intron 35.0%
TGACATGTTAAACGAACATG+GGG + tig0024277:5343-5362 Msa1415720:intron 35.0%
TTAGTAATGTGGGATCTATG+GGG - tig0024277:5373-5392 None:intergenic 35.0%
GGCACACTAAATAAACATGT+GGG - tig0024277:5444-5463 None:intergenic 35.0%
TGGCACACTAAATAAACATG+TGG - tig0024277:5445-5464 None:intergenic 35.0%
TAGAAATCTTAGGAGCGAAT+AGG - tig0024277:5590-5609 None:intergenic 35.0%
!!! GTTGAGAGTTTTTTCAACCA+TGG + tig0024277:5658-5677 Msa1415720:intron 35.0%
ATAAACTTGTGGCAAAACCA+TGG - tig0024277:5678-5697 None:intergenic 35.0%
TGATGCATGGCAATAATGAA+TGG - tig0024277:5788-5807 None:intergenic 35.0%
TATGTGTCTCTTGTGTTCAA+AGG + tig0024277:5954-5973 Msa1415720:intron 35.0%
ATGTGTCTCTTGTGTTCAAA+GGG + tig0024277:5955-5974 Msa1415720:intron 35.0%
AGAATGTCTACAGTGAAAGA+GGG - tig0024277:6023-6042 None:intergenic 35.0%
AAGAATGTCTACAGTGAAAG+AGG - tig0024277:6024-6043 None:intergenic 35.0%
AAAGAGACGATGTTCATAAC+TGG + tig0024277:6119-6138 Msa1415720:CDS 35.0%
GATAGTGAAGGTTCAATTGA+TGG + tig0024277:6160-6179 Msa1415720:CDS 35.0%
GAAGACTTCTGTACCAATAT+TGG - tig0024277:6493-6512 None:intergenic 35.0%
TGTGATATGGAATGTTCAAG+TGG - tig0024277:6579-6598 None:intergenic 35.0%
TTGAACATTCCATATCACAC+TGG + tig0024277:6580-6599 Msa1415720:CDS 35.0%
!! AGTTGAGTGGATTAAACCTT+GGG + tig0024277:6665-6684 Msa1415720:CDS 35.0%
! TCTGTATTCGTTGACTAAGA+GGG - tig0024277:6735-6754 None:intergenic 35.0%
! TTCTGTATTCGTTGACTAAG+AGG - tig0024277:6736-6755 None:intergenic 35.0%
TCAACGAATACAGAACCAAT+TGG + tig0024277:6741-6760 Msa1415720:CDS 35.0%
CAACAACTACAGCTTCATAA+TGG + tig0024277:6823-6842 Msa1415720:CDS 35.0%
!! GTGATCATACTTGCTATTGA+CGG - tig0024277:6983-7002 None:intergenic 35.0%
TAGTCATCGTTTATCACATC+AGG + tig0024277:7032-7051 Msa1415720:CDS 35.0%
AGTCATCGTTTATCACATCA+GGG + tig0024277:7033-7052 Msa1415720:CDS 35.0%
! ATGAACTGCTTTCACTCTTT+TGG - tig0024277:7074-7093 None:intergenic 35.0%
TTCATCACTTGTCATATGCT+TGG - tig0024277:7109-7128 None:intergenic 35.0%
ATAGATGACTATTACCACCA+AGG + tig0024277:7183-7202 Msa1415720:CDS 35.0%
TCTTGCAAAAAAACCTTCTG+TGG + tig0024277:7209-7228 Msa1415720:CDS 35.0%
!!! GCAGAAAGGATGTTTTAACT+TGG - tig0024277:7235-7254 None:intergenic 35.0%
! GAAGTTCCTTTATTTGGGTT+GGG - tig0024277:7257-7276 None:intergenic 35.0%
GTGAAGGAAGTTCCTTTATT+TGG - tig0024277:7263-7282 None:intergenic 35.0%
AAATGCATGAGGATCATTAC+TGG - tig0024277:7295-7314 None:intergenic 35.0%
TCTTTAAATCAGAGCTACCA+GGG - tig0024277:7407-7426 None:intergenic 35.0%
ATCTTTAAATCAGAGCTACC+AGG - tig0024277:7408-7427 None:intergenic 35.0%
GAACACAATTAAGACGAAGA+AGG + tig0024277:7556-7575 Msa1415720:CDS 35.0%
!!! AGGATGACCTTGTTTTCATA+AGG + tig0024277:7663-7682 Msa1415720:CDS 35.0%
TATCTTCAATTGCTTCTTCC+TGG + tig0024277:7725-7744 Msa1415720:CDS 35.0%
! TTTTGGTATCTGTTCTTGAG+AGG + tig0024277:7990-8009 Msa1415720:CDS 35.0%
TTTGGTATCTGTTCTTGAGA+GGG + tig0024277:7991-8010 Msa1415720:CDS 35.0%
! ATATGGGTAATCGTTCCTTT+TGG + tig0024277:8056-8075 Msa1415720:CDS 35.0%
GCCTCATTTGATGAATTCTT+TGG + tig0024277:8082-8101 Msa1415720:CDS 35.0%
GCCAAAGAATTCATCAAATG+AGG - tig0024277:8086-8105 None:intergenic 35.0%
! TGGTGCATTTTGTATAAGGA+GGG - tig0024277:8155-8174 None:intergenic 35.0%
! TTGGTGCATTTTGTATAAGG+AGG - tig0024277:8156-8175 None:intergenic 35.0%
TGCTGCTAAAGCAATTAGTA+AGG + tig0024277:8198-8217 Msa1415720:CDS 35.0%
AATCCAGCAATAACTTCCTT+TGG - tig0024277:8273-8292 None:intergenic 35.0%
TGGATTTAACAGTAATGCTG+GGG + tig0024277:8318-8337 Msa1415720:CDS 35.0%
!! TCACTCCTTCGTTTTTATGG+TGG + tig0024277:394-413 Msa1415720:exon 40.0%
!!! ATGGTGGATATGGATGGTTT+TGG + tig0024277:410-429 Msa1415720:CDS 40.0%
!!! ATATGGATGGTTTTGGAGGT+GGG + tig0024277:417-436 Msa1415720:CDS 40.0%
! TTCTGGAGATCTTAGGCAAT+TGG + tig0024277:463-482 Msa1415720:CDS 40.0%
TCTGGAGATCTTAGGCAATT+GGG + tig0024277:464-483 Msa1415720:CDS 40.0%
TTGCATCAGAAACCTGAAAC+AGG - tig0024277:497-516 None:intergenic 40.0%
CAGTCATAAATAAGGCCTGT+TGG - tig0024277:1053-1072 None:intergenic 40.0%
! TTTTTGCATCTGTGTGTTGG+AGG + tig0024277:1082-1101 Msa1415720:intron 40.0%
! TTTTGCATCTGTGTGTTGGA+GGG + tig0024277:1083-1102 Msa1415720:intron 40.0%
!! GGACAGTTTAATTTGCCACA+AGG + tig0024277:1164-1183 Msa1415720:intron 40.0%
! ACTATAACCTAAGCACTGTC+TGG - tig0024277:1195-1214 None:intergenic 40.0%
!! TTTGGGTTTGGTGGGAATTA+TGG + tig0024277:1437-1456 Msa1415720:intron 40.0%
!! GCCAACTTTTGAGTCTAATG+AGG + tig0024277:1666-1685 Msa1415720:CDS 40.0%
TCTCTCAAAATTCACGTGTC+TGG + tig0024277:1745-1764 Msa1415720:intron 40.0%
GCAAAGTGAGAGTGAATGTT+AGG - tig0024277:1843-1862 None:intergenic 40.0%
AACATTCACTCTCACTTTGC+AGG + tig0024277:1843-1862 Msa1415720:intron 40.0%
! ACGATCTTACAACCACCTTT+TGG + tig0024277:1896-1915 Msa1415720:CDS 40.0%
! TCTTACAACCACCTTTTGGA+AGG + tig0024277:1900-1919 Msa1415720:CDS 40.0%
CAACATCCTTACCTTCCAAA+AGG - tig0024277:1914-1933 None:intergenic 40.0%
! CACACTTTTCTGTATTCTGG+AGG + tig0024277:1946-1965 Msa1415720:intron 40.0%
CTTGTTTCAGTTCTTCCTCA+TGG - tig0024277:2237-2256 None:intergenic 40.0%
GGAAGAACTGAAACAAGTCA+CGG + tig0024277:2240-2259 Msa1415720:intron 40.0%
GAAGAACTGAAACAAGTCAC+GGG + tig0024277:2241-2260 Msa1415720:intron 40.0%
AGTGCAACTGAAACAAGTCA+CGG + tig0024277:2311-2330 Msa1415720:intron 40.0%
GAGAATCATGAAACAGCATG+CGG + tig0024277:2362-2381 Msa1415720:intron 40.0%
TCCGGAACTATTGTTGAATC+AGG + tig0024277:2391-2410 Msa1415720:intron 40.0%
CCCTGATTCAACAATAGTTC+CGG - tig0024277:2395-2414 None:intergenic 40.0%
CCGGAACTATTGTTGAATCA+GGG + tig0024277:2392-2411 Msa1415720:intron 40.0%
!! GCATTTTAGGAGCTAAGTCT+AGG + tig0024277:2433-2452 Msa1415720:intron 40.0%
TTAGGAGCTAAGTCTAGGTA+AGG + tig0024277:2438-2457 Msa1415720:intron 40.0%
AGCTAAGTCTAGGTAAGGTA+AGG + tig0024277:2443-2462 Msa1415720:intron 40.0%
AGTCTAGGTAAGGTAAGGAT+TGG + tig0024277:2448-2467 Msa1415720:intron 40.0%
! TTGCCTTTTCTAAATGCCCA+AGG - tig0024277:2619-2638 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - tig0024277:2718-2737 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - tig0024277:2719-2738 None:intergenic 40.0%
! TTGCTTTAAATAGTGACCGG+AGG + tig0024277:2834-2853 Msa1415720:intron 40.0%
! TCCTTAGGTACTGTTTCTTG+AGG + tig0024277:3071-3090 Msa1415720:intron 40.0%
TCCTCAAGAAACAGTACCTA+AGG - tig0024277:3075-3094 None:intergenic 40.0%
! TTTTTCCTCTCTTGCCTTGT+TGG + tig0024277:3231-3250 Msa1415720:intron 40.0%
TCTGCATGTTATCCCAGTTT+CGG + tig0024277:3480-3499 Msa1415720:intron 40.0%
CTGGGATCGACAACTATATT+TGG + tig0024277:3523-3542 Msa1415720:intron 40.0%
GATCGACAACTATATTTGGG+TGG + tig0024277:3527-3546 Msa1415720:intron 40.0%
! ACTATATTTGGGTGGTGGTT+TGG + tig0024277:3535-3554 Msa1415720:intron 40.0%
ATACTATTGTTAGTTCCCCG+AGG - tig0024277:3561-3580 None:intergenic 40.0%
ATTTATTCTTGGGCTTTGCC+TGG + tig0024277:3663-3682 Msa1415720:intron 40.0%
TGAAGGGTGGTGATATGATA+AGG - tig0024277:3842-3861 None:intergenic 40.0%
!! TTAAGGGTACCCAAAGTACT+TGG - tig0024277:3927-3946 None:intergenic 40.0%
CTCTTATAGCATCTCCAGTA+GGG + tig0024277:3997-4016 Msa1415720:intron 40.0%
TCTTATAGCATCTCCAGTAG+GGG + tig0024277:3998-4017 Msa1415720:intron 40.0%
ACATACTTAGATACCCCTAC+TGG - tig0024277:4014-4033 None:intergenic 40.0%
ACCAACCATAAAAAGAAGGG+GGG + tig0024277:4184-4203 Msa1415720:intron 40.0%
ATGGAAGCGAAATTGAGTGT+GGG + tig0024277:4339-4358 Msa1415720:intron 40.0%
! TTTTCCCTTTTGCCTTTCCT+GGG + tig0024277:4601-4620 Msa1415720:intron 40.0%
AATTCCCAGGAAAGGCAAAA+GGG - tig0024277:4608-4627 None:intergenic 40.0%
AAATTCCCAGGAAAGGCAAA+AGG - tig0024277:4609-4628 None:intergenic 40.0%
ACTGCTTTACTCACTTTCTC+TGG - tig0024277:5095-5114 None:intergenic 40.0%
TAGCAGCAGAAGTTAACAGA+GGG + tig0024277:5477-5496 Msa1415720:intron 40.0%
!!! GAGGGACCATTTTGACTTAA+AGG + tig0024277:5495-5514 Msa1415720:intron 40.0%
AATGTCTACAGTGAAAGAGG+GGG - tig0024277:6021-6040 None:intergenic 40.0%
GAATGTCTACAGTGAAAGAG+GGG - tig0024277:6022-6041 None:intergenic 40.0%
CAGATGTAGAATCTGGATAG+TGG - tig0024277:6090-6109 None:intergenic 40.0%
TCCAGATTCTACATCTGATC+TGG + tig0024277:6093-6112 Msa1415720:intron 40.0%
! CAGAATGCGTATGATAGTGA+AGG + tig0024277:6148-6167 Msa1415720:CDS 40.0%
TAAATGGGCAAGAGAAGACT+GGG - tig0024277:6206-6225 None:intergenic 40.0%
TTCATATCCCGACAAACAAC+AGG + tig0024277:6444-6463 Msa1415720:CDS 40.0%
! AGTAAGCTCCTGTTGTTTGT+CGG - tig0024277:6455-6474 None:intergenic 40.0%
!! CAGTTGAGTGGATTAAACCT+TGG + tig0024277:6664-6683 Msa1415720:CDS 40.0%
TTAAACCTTGGGTCACACTT+TGG + tig0024277:6676-6695 Msa1415720:CDS 40.0%
AACACACGACAATATCCTAC+TGG + tig0024277:6703-6722 Msa1415720:CDS 40.0%
! CTGTATTCGTTGACTAAGAG+GGG - tig0024277:6734-6753 None:intergenic 40.0%
CAGCATATTACTAAGGAGGT+TGG - tig0024277:6800-6819 None:intergenic 40.0%
GTTGCTGCAGCATATTACTA+AGG - tig0024277:6807-6826 None:intergenic 40.0%
TGCAATTGAGTCATCAAGTG+AGG - tig0024277:6859-6878 None:intergenic 40.0%
GGGGATTAAATAAATGGGAC+TGG - tig0024277:6942-6961 None:intergenic 40.0%
!!! GTTTTTTTGCAAGACGACCT+TGG - tig0024277:7203-7222 None:intergenic 40.0%
!!! TGTTTTAACTTGGCCACAGA+AGG - tig0024277:7225-7244 None:intergenic 40.0%
!! TTTATTTGGGTTGGGCAGAA+AGG - tig0024277:7249-7268 None:intergenic 40.0%
TTTCTGCCCAACCCAAATAA+AGG + tig0024277:7248-7267 Msa1415720:CDS 40.0%
! GGAAGTTCCTTTATTTGGGT+TGG - tig0024277:7258-7277 None:intergenic 40.0%
TGATCCTCATGCATTTCTTC+AGG + tig0024277:7299-7318 Msa1415720:CDS 40.0%
TCAACCTGAAGAAATGCATG+AGG - tig0024277:7306-7325 None:intergenic 40.0%
!! TTTCTTCAGGTTGATTCCCT+AGG + tig0024277:7312-7331 Msa1415720:CDS 40.0%
!! TTCTTCAGGTTGATTCCCTA+GGG + tig0024277:7313-7332 Msa1415720:CDS 40.0%
AATTGTGTTCCACCATCTTG+TGG - tig0024277:7546-7565 None:intergenic 40.0%
ACAATTAAGACGAAGAAGGC+AGG + tig0024277:7560-7579 Msa1415720:CDS 40.0%
AAGTAGCTAGTCCTTCCAAT+AGG - tig0024277:7587-7606 None:intergenic 40.0%
ACTAGCTACTTCACTTCAAC+TGG + tig0024277:7596-7615 Msa1415720:intron 40.0%
AAGGATAGTATCTGTCCCTA+AGG + tig0024277:7682-7701 Msa1415720:CDS 40.0%
AGGATAGTATCTGTCCCTAA+GGG + tig0024277:7683-7702 Msa1415720:CDS 40.0%
GCAATTGAAGATACTTCGCA+AGG - tig0024277:7718-7737 None:intergenic 40.0%
TCATGCAAACTATCCGCATA+AGG - tig0024277:7757-7776 None:intergenic 40.0%
GAATCTTAAATGCCGAAGGA+CGG - tig0024277:7780-7799 None:intergenic 40.0%
TATACATTGGCAGACAACCT+CGG - tig0024277:7858-7877 None:intergenic 40.0%
AGGTTGTCTGCCAATGTATA+CGG + tig0024277:7858-7877 Msa1415720:CDS 40.0%
!! AGATGGTGCTTCCCTTATTT+TGG + tig0024277:7973-7992 Msa1415720:CDS 40.0%
AGCAGCCTGCAACTATAATA+TGG + tig0024277:8039-8058 Msa1415720:CDS 40.0%
GCAGCCTGCAACTATAATAT+GGG + tig0024277:8040-8059 Msa1415720:CDS 40.0%
GATCCAATGTCATCCACATT+TGG - tig0024277:8175-8194 None:intergenic 40.0%
GGATTTAACAGTAATGCTGG+GGG + tig0024277:8319-8338 Msa1415720:CDS 40.0%
GATTTAACAGTAATGCTGGG+GGG + tig0024277:8320-8339 Msa1415720:CDS 40.0%
TTAGCACATGGGGTTGGATT+TGG - tig0024277:221-240 None:intergenic 45.0%
AGGAATTTAGCACATGGGGT+TGG - tig0024277:227-246 None:intergenic 45.0%
GAAAGGGGAAGATCTGTGAT+AGG - tig0024277:247-266 None:intergenic 45.0%
!!! GTGGATATGGATGGTTTTGG+AGG + tig0024277:413-432 Msa1415720:CDS 45.0%
!!! GATATGGATGGTTTTGGAGG+TGG + tig0024277:416-435 Msa1415720:CDS 45.0%
!!! TATGGATGGTTTTGGAGGTG+GGG + tig0024277:418-437 Msa1415720:CDS 45.0%
TTGGGTCATGTTCCTGTTTC+AGG + tig0024277:482-501 Msa1415720:CDS 45.0%
TCATCTGGGTCATGTAGATC+TGG + tig0024277:566-585 Msa1415720:intron 45.0%
TTTGCATCTGTGTGTTGGAG+GGG + tig0024277:1084-1103 Msa1415720:intron 45.0%
TGGTGGGAATTATGGTCACA+TGG + tig0024277:1445-1464 Msa1415720:intron 45.0%
GGTGGGAATTATGGTCACAT+GGG + tig0024277:1446-1465 Msa1415720:intron 45.0%
CTTTGGTAAAGATGCTGTCC+AGG + tig0024277:1606-1625 Msa1415720:CDS 45.0%
!! CAACCACCTTTTGGAAGGTA+AGG + tig0024277:1905-1924 Msa1415720:intron 45.0%
CATCCTTACCTTCCAAAAGG+TGG - tig0024277:1911-1930 None:intergenic 45.0%
GAAATCATGGAAAACGGTGC+AGG - tig0024277:2180-2199 None:intergenic 45.0%
ACTGAAACAAGTCACGGGTT+TGG + tig0024277:2246-2265 Msa1415720:intron 45.0%
GTGCAACTGAAACAAGTCAC+GGG + tig0024277:2312-2331 Msa1415720:intron 45.0%
ACTGAAACAAGTCACGGGTT+TGG + tig0024277:2246-2265 Msa1415720:intron 45.0%
! TGTTTTCATGTGGACAAGGG+CGG - tig0024277:2478-2497 None:intergenic 45.0%
CACATGAGCGACCTTATAAC+GGG - tig0024277:3137-3156 None:intergenic 45.0%
GCACATGAGCGACCTTATAA+CGG - tig0024277:3138-3157 None:intergenic 45.0%
CGACAACTATATTTGGGTGG+TGG + tig0024277:3530-3549 Msa1415720:intron 45.0%
! AGGCTCAACGGAGTACTTAA+GGG - tig0024277:3943-3962 None:intergenic 45.0%
CTAAGTATCACCACGTTGAG+AGG - tig0024277:3963-3982 None:intergenic 45.0%
CTCTCAACGTGGTGATACTT+AGG + tig0024277:3961-3980 Msa1415720:intron 45.0%
CCTACTGGAGATGCTATAAG+AGG - tig0024277:3999-4018 None:intergenic 45.0%
CCTCTTATAGCATCTCCAGT+AGG + tig0024277:3996-4015 Msa1415720:intron 45.0%
GCTATCAAATTCCCCACATC+AGG - tig0024277:4086-4105 None:intergenic 45.0%
GATGGAAGCGAAATTGAGTG+TGG + tig0024277:4338-4357 Msa1415720:intron 45.0%
TGGAAGCGAAATTGAGTGTG+GGG + tig0024277:4340-4359 Msa1415720:intron 45.0%
GAAATTGAGTGTGGGGTGAT+TGG + tig0024277:4347-4366 Msa1415720:intron 45.0%
CAGGAAAGGCAAAAGGGAAA+AGG - tig0024277:4602-4621 None:intergenic 45.0%
! CTTTTCCCTTTTGCCTTTCC+TGG + tig0024277:4600-4619 Msa1415720:intron 45.0%
TAGTTGAACAAGGCTGTCAG+TGG + tig0024277:5034-5053 Msa1415720:intron 45.0%
CCAATAACACCTGGGTTTCT+TGG - tig0024277:5061-5080 None:intergenic 45.0%
! CCAAGAAACCCAGGTGTTAT+TGG + tig0024277:5058-5077 Msa1415720:CDS 45.0%
CACGTTCACCAATAACACCT+GGG - tig0024277:5069-5088 None:intergenic 45.0%
! GCATTGATATGGGATCCAAG+TGG + tig0024277:5415-5434 Msa1415720:intron 45.0%
TAAACATGTGGGCATCCACT+TGG - tig0024277:5433-5452 None:intergenic 45.0%
CTGTTAACTTCTGCTGCTAG+AGG - tig0024277:5476-5495 None:intergenic 45.0%
CTAGCAGCAGAAGTTAACAG+AGG + tig0024277:5476-5495 Msa1415720:intron 45.0%
ATCGATGCTCGCAATTTCGA+GGG + tig0024277:5556-5575 Msa1415720:intron 45.0%
!!! TGAGGAGAGGCACTAGTTTT+AGG + tig0024277:5829-5848 Msa1415720:intron 45.0%
!!! GAGGAGAGGCACTAGTTTTA+GGG + tig0024277:5830-5849 Msa1415720:intron 45.0%
GCCAGATCAGATGTAGAATC+TGG - tig0024277:6097-6116 None:intergenic 45.0%
AAATGGGCAAGAGAAGACTG+GGG - tig0024277:6205-6224 None:intergenic 45.0%
GTAAATGGGCAAGAGAAGAC+TGG - tig0024277:6207-6226 None:intergenic 45.0%
CTTCATATCCTGAGCAGCTA+AGG + tig0024277:6254-6273 Msa1415720:CDS 45.0%
TGATCAAGCCAGTTGTGAAC+TGG - tig0024277:6319-6338 None:intergenic 45.0%
CAGCTCATGATGACAAACGA+TGG + tig0024277:6359-6378 Msa1415720:CDS 45.0%
! AAGTGTGGAATGGAGGTATG+CGG - tig0024277:6394-6413 None:intergenic 45.0%
TGATTCGTGCAAGTGTGGAA+TGG - tig0024277:6404-6423 None:intergenic 45.0%
! GTAAGCTCCTGTTGTTTGTC+GGG - tig0024277:6454-6473 None:intergenic 45.0%
TTTCACTTCTTATCCTCCGC+CGG + tig0024277:6513-6532 Msa1415720:CDS 45.0%
GGTTCTCCAAGTCATAGTAC+AGG + tig0024277:6553-6572 Msa1415720:CDS 45.0%
AAGTGGCCTGTACTATGACT+TGG - tig0024277:6562-6581 None:intergenic 45.0%
AGCGCAGAATTGGAGAAATG+TGG - tig0024277:6643-6662 None:intergenic 45.0%
ACTCAACTGTAGCGCAGAAT+TGG - tig0024277:6653-6672 None:intergenic 45.0%
AATTCTGCGCTACAGTTGAG+TGG + tig0024277:6652-6671 Msa1415720:CDS 45.0%
! TATTCGTTGACTAAGAGGGG+AGG - tig0024277:6731-6750 None:intergenic 45.0%
AACCAATTGGTCAACCAAGC+AGG + tig0024277:6754-6773 Msa1415720:CDS 45.0%
ACCAATTGGTCAACCAAGCA+GGG + tig0024277:6755-6774 Msa1415720:CDS 45.0%
AACCAAGCAGGGTTATATCC+AGG + tig0024277:6766-6785 Msa1415720:CDS 45.0%
CAGGGTTATATCCAGGAGAT+CGG + tig0024277:6773-6792 Msa1415720:CDS 45.0%
GCTGCAGCATATTACTAAGG+AGG - tig0024277:6804-6823 None:intergenic 45.0%
! TTGCTATTGACGGATGAGCT+AGG - tig0024277:6973-6992 None:intergenic 45.0%
!! GCTTTCACTCTTTTGGCTAC+TGG - tig0024277:7067-7086 None:intergenic 45.0%
! TTTTTGCAAGACGACCTTGG+TGG - tig0024277:7200-7219 None:intergenic 45.0%
TTACTGGAACGTGTTCGTGA+AGG - tig0024277:7279-7298 None:intergenic 45.0%
CGAAAATGAAACCCTCCCTA+GGG - tig0024277:7331-7350 None:intergenic 45.0%
ACGAAAATGAAACCCTCCCT+AGG - tig0024277:7332-7351 None:intergenic 45.0%
GAGAATCAGCCTCAAGAAGA+GGG - tig0024277:7371-7390 None:intergenic 45.0%
TCTCCAAATTCTTCCATCCC+TGG + tig0024277:7387-7406 Msa1415720:CDS 45.0%
CTACCAGGGATGGAAGAATT+TGG - tig0024277:7393-7412 None:intergenic 45.0%
TAAATCAGAGCTACCAGGGA+TGG - tig0024277:7403-7422 None:intergenic 45.0%
!! TTCAGAGAAGCCTCTAGAAC+AGG + tig0024277:7428-7447 Msa1415720:CDS 45.0%
AATGTAGGCTCCTGTTCTAG+AGG - tig0024277:7441-7460 None:intergenic 45.0%
CTTGTGGCTGATTAGACTGT+AGG - tig0024277:7530-7549 None:intergenic 45.0%
CAGTCTAATCAGCCACAAGA+TGG + tig0024277:7531-7550 Msa1415720:CDS 45.0%
TCTAATCAGCCACAAGATGG+TGG + tig0024277:7534-7553 Msa1415720:CDS 45.0%
GGAAAAATGGGCACAAGGTT+GGG + tig0024277:7630-7649 Msa1415720:intron 45.0%
! TTCCTGGTAGTGACCTTATG+CGG + tig0024277:7741-7760 Msa1415720:CDS 45.0%
! TAGTTTGCATGACCGTCCTT+CGG + tig0024277:7765-7784 Msa1415720:CDS 45.0%
GGTTGTCTGCCAATGTATAC+GGG + tig0024277:7859-7878 Msa1415720:CDS 45.0%
GTTGTCTGCCAATGTATACG+GGG + tig0024277:7860-7879 Msa1415720:CDS 45.0%
GATCCATTCCCCGTATACAT+TGG - tig0024277:7871-7890 None:intergenic 45.0%
TGTATACGGGGAATGGATCT+TGG + tig0024277:7872-7891 Msa1415720:CDS 45.0%
ACAAACAACTGCAGCAAGAC+AGG - tig0024277:7909-7928 None:intergenic 45.0%
TTGTGGATCGGTTAGAAGCT+CGG - tig0024277:8020-8039 None:intergenic 45.0%
TTATAGTTGCAGGCTGCTTG+TGG - tig0024277:8037-8056 None:intergenic 45.0%
ATCAAATGAGGCCTGCCAAA+AGG - tig0024277:8074-8093 None:intergenic 45.0%
GCACCAAATGTGGATGACAT+TGG + tig0024277:8169-8188 Msa1415720:CDS 45.0%
CCAGCAATAACTTCCTTTGG+TGG - tig0024277:8270-8289 None:intergenic 45.0%
CCACCAAAGGAAGTTATTGC+TGG + tig0024277:8267-8286 Msa1415720:CDS 45.0%
TGGGGTTGGATTTGGATCAG+AGG - tig0024277:213-232 None:intergenic 50.0%
!!! ATGGATGGTTTTGGAGGTGG+GGG + tig0024277:419-438 Msa1415720:CDS 50.0%
CTAAGATCTCCAGAACCAGG+AGG - tig0024277:458-477 None:intergenic 50.0%
!! CTCCTGGTTCTGGAGATCTT+AGG + tig0024277:456-475 Msa1415720:CDS 50.0%
TGCCTAAGATCTCCAGAACC+AGG - tig0024277:461-480 None:intergenic 50.0%
ATCTGTGTGTTGGAGGGGTA+GGG + tig0024277:1089-1108 Msa1415720:intron 50.0%
!! CACTGTCTGGATTAGCCTTG+TGG - tig0024277:1182-1201 None:intergenic 50.0%
GGCTAATCCAGACAGTGCTT+AGG + tig0024277:1185-1204 Msa1415720:intron 50.0%
CACTCTCACTTTGCAGGATG+AGG + tig0024277:1849-1868 Msa1415720:intron 50.0%
ACACGGGCCTTTGAATACCT+TGG + tig0024277:2599-2618 Msa1415720:intron 50.0%
CACGGGCCTTTGAATACCTT+GGG + tig0024277:2600-2619 Msa1415720:intron 50.0%
! GACACAAGGCTTGGTTGTTG+TGG - tig0024277:2974-2993 None:intergenic 50.0%
ACACTTAGCGACACAAGGCT+TGG - tig0024277:2983-3002 None:intergenic 50.0%
! AAGCCTTGTGTCGCTAAGTG+TGG + tig0024277:2982-3001 Msa1415720:intron 50.0%
! CTTGTGTCGCTAAGTGTGGT+CGG + tig0024277:2986-3005 Msa1415720:intron 50.0%
ATCTGCCAACAAGGCAAGAG+AGG - tig0024277:3239-3258 None:intergenic 50.0%
TGGGATAACATGCAGAGCAG+TGG - tig0024277:3476-3495 None:intergenic 50.0%
! AATATTGGTTGGGTCAGGCC+AGG - tig0024277:3684-3703 None:intergenic 50.0%
!! GCTTAAGCTTTAGGGGCAGT+TGG - tig0024277:3736-3755 None:intergenic 50.0%
!! AAGATGTCGGCTTTGAAGGG+TGG - tig0024277:3855-3874 None:intergenic 50.0%
ACCCTTCAAAGCCGACATCT+TGG + tig0024277:3854-3873 Msa1415720:intron 50.0%
!! GCCAAGATGTCGGCTTTGAA+GGG - tig0024277:3858-3877 None:intergenic 50.0%
!! TGCCAAGATGTCGGCTTTGA+AGG - tig0024277:3859-3878 None:intergenic 50.0%
CCAGCCTCTCCAAGTACTTT+GGG + tig0024277:3915-3934 Msa1415720:intron 50.0%
! GGTACCCAAAGTACTTGGAG+AGG - tig0024277:3922-3941 None:intergenic 50.0%
! GAGGCTCAACGGAGTACTTA+AGG - tig0024277:3944-3963 None:intergenic 50.0%
CACATCAGGTTCCTCCAATG+GGG - tig0024277:4072-4091 None:intergenic 50.0%
CCACATCAGGTTCCTCCAAT+GGG - tig0024277:4073-4092 None:intergenic 50.0%
CCATTGGAGGAACCTGATGT+GGG + tig0024277:4071-4090 Msa1415720:intron 50.0%
CATTGGAGGAACCTGATGTG+GGG + tig0024277:4072-4091 Msa1415720:intron 50.0%
! GCCCCCCTTCTTTTTATGGT+TGG - tig0024277:4188-4207 None:intergenic 50.0%
! CTTCGCCCCCCTTCTTTTTA+TGG - tig0024277:4192-4211 None:intergenic 50.0%
AGTGTGGGGTGATTGGTATG+TGG + tig0024277:4354-4373 Msa1415720:intron 50.0%
CCACGTTCACCAATAACACC+TGG - tig0024277:5070-5089 None:intergenic 50.0%
!! CCAGGTGTTATTGGTGAACG+TGG + tig0024277:5067-5086 Msa1415720:CDS 50.0%
TGCTGCTAGAGGCTATAACG+TGG - tig0024277:5465-5484 None:intergenic 50.0%
GATCGATGCTCGCAATTTCG+AGG + tig0024277:5555-5574 Msa1415720:intron 50.0%
ACAGTGAAAGAGGGGGAGAA+GGG - tig0024277:6014-6033 None:intergenic 50.0%
TACAGTGAAAGAGGGGGAGA+AGG - tig0024277:6015-6034 None:intergenic 50.0%
CACTAGAGCAATGTTGGAGG+TGG - tig0024277:6294-6313 None:intergenic 50.0%
GCTCACTAGAGCAATGTTGG+AGG - tig0024277:6297-6316 None:intergenic 50.0%
CTGGCTCACTAGAGCAATGT+TGG - tig0024277:6300-6319 None:intergenic 50.0%
CTAGTGAGCCAGTTCACAAC+TGG + tig0024277:6308-6327 Msa1415720:CDS 50.0%
TTCGTGCAAGTGTGGAATGG+AGG - tig0024277:6401-6420 None:intergenic 50.0%
!! GGTGTTGATTCGTGCAAGTG+TGG - tig0024277:6409-6428 None:intergenic 50.0%
TTCACTTCTTATCCTCCGCC+GGG + tig0024277:6514-6533 Msa1415720:CDS 50.0%
AACCTTGGGTCACACTTTGG+TGG + tig0024277:6679-6698 Msa1415720:CDS 50.0%
TTCCACCAAAGTGTGACCCA+AGG - tig0024277:6684-6703 None:intergenic 50.0%
ACCCTGCTTGGTTGACCAAT+TGG - tig0024277:6759-6778 None:intergenic 50.0%
CTCCTGGATATAACCCTGCT+TGG - tig0024277:6771-6790 None:intergenic 50.0%
CATCCTGTTCAGCAATCTGC+AGG + tig0024277:6901-6920 Msa1415720:CDS 50.0%
TAGCCTGCAGATTGCTGAAC+AGG - tig0024277:6907-6926 None:intergenic 50.0%
CAATCTGCAGGCTACTTGTC+AGG + tig0024277:6913-6932 Msa1415720:CDS 50.0%
GATGAGCTAGGAGAAAGGTG+GGG - tig0024277:6961-6980 None:intergenic 50.0%
GGATGAGCTAGGAGAAAGGT+GGG - tig0024277:6962-6981 None:intergenic 50.0%
! TGACGGATGAGCTAGGAGAA+AGG - tig0024277:6966-6985 None:intergenic 50.0%
!! TTCAGGTTGATTCCCTAGGG+AGG + tig0024277:7316-7335 Msa1415720:CDS 50.0%
!! TCAGGTTGATTCCCTAGGGA+GGG + tig0024277:7317-7336 Msa1415720:CDS 50.0%
GGAGAATCAGCCTCAAGAAG+AGG - tig0024277:7372-7391 None:intergenic 50.0%
GTGACTCTGGCAGCAAATGT+AGG - tig0024277:7456-7475 None:intergenic 50.0%
TGCTGCCAGAGTCACAATTG+AGG + tig0024277:7461-7480 Msa1415720:CDS 50.0%
GCCAGAGTCACAATTGAGGA+CGG + tig0024277:7465-7484 Msa1415720:CDS 50.0%
ACCGTCCTCAATTGTGACTC+TGG - tig0024277:7469-7488 None:intergenic 50.0%
ACGAAGAAGGCAGGTCCTAT+TGG + tig0024277:7569-7588 Msa1415720:intron 50.0%
AGAAGGCAGGTCCTATTGGA+AGG + tig0024277:7573-7592 Msa1415720:intron 50.0%
GTTGACCCGCTGGGAAAAAT+GGG + tig0024277:7618-7637 Msa1415720:intron 50.0%
!! TTGTGCCCATTTTTCCCAGC+GGG - tig0024277:7626-7645 None:intergenic 50.0%
!! CTTGTGCCCATTTTTCCCAG+CGG - tig0024277:7627-7646 None:intergenic 50.0%
GGGAAAAATGGGCACAAGGT+TGG + tig0024277:7629-7648 Msa1415720:intron 50.0%
ATCCGCATAAGGTCACTACC+AGG - tig0024277:7746-7765 None:intergenic 50.0%
! CTTATTTGGTGGTCTCCCCT+CGG + tig0024277:7799-7818 Msa1415720:CDS 50.0%
CTGCCAATGTATACGGGGAA+TGG + tig0024277:7865-7884 Msa1415720:CDS 50.0%
! GGGTAATCGTTCCTTTTGGC+AGG + tig0024277:8060-8079 Msa1415720:CDS 50.0%
CTTGCACGCAAGAGTTCAAC+AGG - tig0024277:8229-8248 None:intergenic 50.0%
! TTTGGTGGTCATCAGTGTGG+GGG - tig0024277:8255-8274 None:intergenic 50.0%
! CTTTGGTGGTCATCAGTGTG+GGG - tig0024277:8256-8275 None:intergenic 50.0%
! CCTTTGGTGGTCATCAGTGT+GGG - tig0024277:8257-8276 None:intergenic 50.0%
! TCCTTTGGTGGTCATCAGTG+TGG - tig0024277:8258-8277 None:intergenic 50.0%
TTTGGAGGTGGGGGTGATCT+TGG + tig0024277:428-447 Msa1415720:CDS 55.0%
CATCTGTGTGTTGGAGGGGT+AGG + tig0024277:1088-1107 Msa1415720:intron 55.0%
TCTGTGTGTTGGAGGGGTAG+GGG + tig0024277:1090-1109 Msa1415720:intron 55.0%
GAGGGTTGAAGAACATCGCG+TGG + tig0024277:1112-1131 Msa1415720:intron 55.0%
TGCTGTCCAGGAAGTCGAGT+TGG + tig0024277:1618-1637 Msa1415720:CDS 55.0%
GCTGTCCAGGAAGTCGAGTT+GGG + tig0024277:1619-1638 Msa1415720:CDS 55.0%
!! TCCAGGAAGTCGAGTTGGGA+GGG + tig0024277:1623-1642 Msa1415720:CDS 55.0%
! CGAGTTGGGAGGGTTAGAAG+AGG + tig0024277:1633-1652 Msa1415720:CDS 55.0%
AACAGCATGCGGCAGCTATC+CGG + tig0024277:2373-2392 Msa1415720:intron 55.0%
CGACCACACTTAGCGACACA+AGG - tig0024277:2988-3007 None:intergenic 55.0%
! TAGCGGTCGACTCCGAAACT+GGG - tig0024277:3495-3514 None:intergenic 55.0%
! ATAGCGGTCGACTCCGAAAC+TGG - tig0024277:3496-3515 None:intergenic 55.0%
TCGACCGCTATGCGTGATCT+GGG + tig0024277:3505-3524 Msa1415720:intron 55.0%
CGATCCCAGATCACGCATAG+CGG - tig0024277:3512-3531 None:intergenic 55.0%
! TTTGGGTGGTGGTTTGGCCT+CGG + tig0024277:3541-3560 Msa1415720:intron 55.0%
GAGTGCAGCTGCCAAGATGT+CGG - tig0024277:3868-3887 None:intergenic 55.0%
GCCAGCCTCTCCAAGTACTT+TGG + tig0024277:3914-3933 Msa1415720:intron 55.0%
! CCCAAAGTACTTGGAGAGGC+TGG - tig0024277:3918-3937 None:intergenic 55.0%
CACCACGTTGAGAGGCTCAA+CGG - tig0024277:3955-3974 None:intergenic 55.0%
CCCATTGGAGGAACCTGATG+TGG + tig0024277:4070-4089 Msa1415720:intron 55.0%
CCCACATCAGGTTCCTCCAA+TGG - tig0024277:4074-4093 None:intergenic 55.0%
GTGGGGTGATTGGTATGTGG+AGG + tig0024277:4357-4376 Msa1415720:intron 55.0%
GTCAGTGGACCAAGAAACCC+AGG + tig0024277:5049-5068 Msa1415720:CDS 55.0%
CAGTGAAAGAGGGGGAGAAG+GGG - tig0024277:6013-6032 None:intergenic 55.0%
TGCTCTTGCCTTAGCTGCTC+AGG - tig0024277:6265-6284 None:intergenic 55.0%
GCTGCTGCTCCAGTGTGATA+TGG - tig0024277:6592-6611 None:intergenic 55.0%
CTAAGAGGGGAGGAACCAGT+AGG - tig0024277:6721-6740 None:intergenic 55.0%
CGGATGAGCTAGGAGAAAGG+TGG - tig0024277:6963-6982 None:intergenic 55.0%
ACTTCAACTGGTTGACCCGC+TGG + tig0024277:7608-7627 Msa1415720:intron 55.0%
CTTCAACTGGTTGACCCGCT+GGG + tig0024277:7609-7628 Msa1415720:intron 55.0%
GGTTGACCCGCTGGGAAAAA+TGG + tig0024277:7617-7636 Msa1415720:intron 55.0%
CGCTGGGAAAAATGGGCACA+AGG + tig0024277:7625-7644 Msa1415720:intron 55.0%
CAAGGTTGGGCTTGCAGCTA+AGG + tig0024277:7643-7662 Msa1415720:intron 55.0%
CAAGGAGCTTGCGTCCCTTA+GGG - tig0024277:7700-7719 None:intergenic 55.0%
CATGTAGTCACTGCAGCTGC+TGG - tig0024277:7827-7846 None:intergenic 55.0%
GACTACATGCAACCTTGCCG+AGG + tig0024277:7838-7857 Msa1415720:CDS 55.0%
ATTGGCAGACAACCTCGGCA+AGG - tig0024277:7853-7872 None:intergenic 55.0%
CTCCAGCAGTGCTTCCAACA+GGG - tig0024277:7955-7974 None:intergenic 55.0%
TCTCCAGCAGTGCTTCCAAC+AGG - tig0024277:7956-7975 None:intergenic 55.0%
!! GTTGGAAGCACTGCTGGAGA+TGG + tig0024277:7956-7975 Msa1415720:CDS 55.0%
GTTGCAGGCTGCTTGTGGAT+CGG - tig0024277:8032-8051 None:intergenic 55.0%
CCCACACTGATGACCACCAA+AGG + tig0024277:8254-8273 Msa1415720:CDS 55.0%
CAGCGTTCTGTTCCCGTGAT+TGG + tig0024277:8298-8317 Msa1415720:CDS 55.0%
AACAGTAATGCTGGGGGGAG+TGG + tig0024277:8325-8344 Msa1415720:CDS 55.0%
! GGTGATCTTGGTGGACCTCC+TGG + tig0024277:440-459 Msa1415720:CDS 60.0%
! CTTGGTGGACCTCCTGGTTC+TGG + tig0024277:446-465 Msa1415720:CDS 60.0%
TGTGTTGGAGGGGTAGGGGA+GGG + tig0024277:1094-1113 Msa1415720:intron 60.0%
!! GTCCAGGAAGTCGAGTTGGG+AGG + tig0024277:1622-1641 Msa1415720:CDS 60.0%
ACCCTCCCAACTCGACTTCC+TGG - tig0024277:1627-1646 None:intergenic 60.0%
GTCGACCGCTATGCGTGATC+TGG + tig0024277:3504-3523 Msa1415720:intron 60.0%
! TTGGGTGGTGGTTTGGCCTC+GGG + tig0024277:3542-3561 Msa1415720:intron 60.0%
CTCCGTTGAGCCTCTCAACG+TGG + tig0024277:3950-3969 Msa1415720:intron 60.0%
ACTTCTTATCCTCCGCCGGG+TGG + tig0024277:6517-6536 Msa1415720:CDS 60.0%
TGTTGAGATCGACCACCCGG+CGG - tig0024277:6532-6551 None:intergenic 60.0%
CCCTGTTGAGATCGACCACC+CGG - tig0024277:6535-6554 None:intergenic 60.0%
CCGGGTGGTCGATCTCAACA+GGG + tig0024277:6532-6551 Msa1415720:CDS 60.0%
CACTGGAGCAGCAGCTCAGT+TGG + tig0024277:6597-6616 Msa1415720:CDS 60.0%
AGGAGGTTGGACCGATCTCC+TGG - tig0024277:6787-6806 None:intergenic 60.0%
TCAGCCTCAAGAAGAGGGCG+AGG - tig0024277:7366-7385 None:intergenic 60.0%
GCAAGGAGCTTGCGTCCCTT+AGG - tig0024277:7701-7720 None:intergenic 60.0%
ACTGCAGCTGCTGGATCCGA+GGG - tig0024277:7818-7837 None:intergenic 60.0%
CATCCTCCTCTACGCCCTGT+TGG + tig0024277:7938-7957 Msa1415720:CDS 60.0%
CTTCCAACAGGGCGTAGAGG+AGG - tig0024277:7944-7963 None:intergenic 60.0%
GTGCTTCCAACAGGGCGTAG+AGG - tig0024277:7947-7966 None:intergenic 60.0%
GGAGGGACTGCATGATGCTG+TGG - tig0024277:8138-8157 None:intergenic 60.0%
AGTAATGCTGGGGGGAGTGG+AGG + tig0024277:8328-8347 Msa1415720:CDS 60.0%
GGAGGTGGGGGTGATCTTGG+TGG + tig0024277:431-450 Msa1415720:CDS 65.0%
GTGTGTTGGAGGGGTAGGGG+AGG + tig0024277:1093-1112 Msa1415720:intron 65.0%
! TGGGTGGTGGTTTGGCCTCG+GGG + tig0024277:3543-3562 Msa1415720:intron 65.0%
GCCGGGTGGTCGATCTCAAC+AGG + tig0024277:6531-6550 Msa1415720:CDS 65.0%
TCGGCCTCGCCCTCTTCTTG+AGG + tig0024277:7359-7378 Msa1415720:CDS 65.0%
CTGCAGCTGCTGGATCCGAG+GGG - tig0024277:7817-7836 None:intergenic 65.0%
CACTGCAGCTGCTGGATCCG+AGG - tig0024277:7819-7838 None:intergenic 65.0%
!! CGCCCTGTTGGAAGCACTGC+TGG + tig0024277:7950-7969 Msa1415720:CDS 65.0%
GGTGGTCATCAGTGTGGGGG+AGG - tig0024277:8252-8271 None:intergenic 65.0%
TGAGATCGACCACCCGGCGG+AGG - tig0024277:6529-6548 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0024277 gene 150 8381 150 ID=Msa1415720;Name=Msa1415720
tig0024277 mRNA 150 8381 150 ID=Msa1415720-mRNA-1;Parent=Msa1415720;Name=Msa1415720-mRNA-1;_AED=0.04;_eAED=0.04;_QI=260|0.8|0.66|1|1|1|6|0|858
tig0024277 exon 150 503 150 ID=Msa1415720-mRNA-1:exon:22589;Parent=Msa1415720-mRNA-1
tig0024277 exon 1572 1714 1572 ID=Msa1415720-mRNA-1:exon:22590;Parent=Msa1415720-mRNA-1
tig0024277 exon 1865 1921 1865 ID=Msa1415720-mRNA-1:exon:22591;Parent=Msa1415720-mRNA-1
tig0024277 exon 5037 5100 5037 ID=Msa1415720-mRNA-1:exon:22592;Parent=Msa1415720-mRNA-1
tig0024277 exon 6098 7581 6098 ID=Msa1415720-mRNA-1:exon:22593;Parent=Msa1415720-mRNA-1
tig0024277 exon 7647 8381 7647 ID=Msa1415720-mRNA-1:exon:22594;Parent=Msa1415720-mRNA-1
tig0024277 five_prime_UTR 150 409 150 ID=Msa1415720-mRNA-1:five_prime_utr;Parent=Msa1415720-mRNA-1
tig0024277 CDS 410 503 410 ID=Msa1415720-mRNA-1:cds;Parent=Msa1415720-mRNA-1
tig0024277 CDS 1572 1714 1572 ID=Msa1415720-mRNA-1:cds;Parent=Msa1415720-mRNA-1
tig0024277 CDS 1865 1921 1865 ID=Msa1415720-mRNA-1:cds;Parent=Msa1415720-mRNA-1
tig0024277 CDS 5037 5100 5037 ID=Msa1415720-mRNA-1:cds;Parent=Msa1415720-mRNA-1
tig0024277 CDS 6098 7581 6098 ID=Msa1415720-mRNA-1:cds;Parent=Msa1415720-mRNA-1
tig0024277 CDS 7647 8381 7647 ID=Msa1415720-mRNA-1:cds;Parent=Msa1415720-mRNA-1
Gene Sequence

>Msa1415720

ATGGTGGATATGGATGGTTTTGGAGGTGGGGGTGATCTTGGTGGACCTCCTGGTTCTGGAGATCTTAGGCAATTGGGTCATGTTCCTGTTTCAGGAGGTGCTGTTTTTGATGCATCACAATATGCATTCTTTGGTAAAGATGCTGTCCAGGAAGTCGAGTTGGGAGGGTTAGAAGAGGACGCCCATTTGCCAACTTTTGAGTCTAATGAGGAGGAGTTCTTTTTTAATAGAGAACAGGATGAGGATGTGAGATCTCTTTCTGATATTGACGATCTTACAACCACCTTTTGGAAGTTGAACAAGGCTGTCAGTGGACCAAGAAACCCAGGTGTTATTGGTGAACGTGGATCCAGAGAAAATTCTACATCTGATCTGGCACAAAGAGACGATGTTCATAACTGGTTTGATCAGAATGCGTATGATAGTGAAGGTTCAATTGATGGAAAAAGATGGTCATCACAGCCCCAGTCTTCTCTTGCCCATTTACAAAATTCAAAGTCCTTGTACAGAACATCTTCATATCCTGAGCAGCTAAGGCAAGAGCAAAACTACCACCTCCAACATTGCTCTAGTGAGCCAGTTCACAACTGGCTTGATCAACATATTTATGATATTGAAACAGCTCATGATGACAAACGATGGTCATCTCAGCCGCATACCTCCATTCCACACTTGCACGAATCAACACCCTTGTACAGAACATCTTCATATCCCGACAAACAACAGGAGCTTACTCGTTTTTCTAGTGAGCCAATATTGGTACAGAAGTCTTCTTTCACTTCTTATCCTCCGCCGGGTGGTCGATCTCAACAGGGTTCTCCAAGTCATAGTACAGGCCACTTGAACATTCCATATCACACTGGAGCAGCAGCTCAGTTGGCACTATCATCTCAAAATCGACCACATTTCTCCAATTCTGCGCTACAGTTGAGTGGATTAAACCTTGGGTCACACTTTGGTGGAAACACACGACAATATCCTACTGGTTCCTCCCCTCTTAGTCAACGAATACAGAACCAATTGGTCAACCAAGCAGGGTTATATCCAGGAGATCGGTCCAACCTCCTTAGTAATATGCTGCAGCAACAACTACAGCTTCATAATGGATCAGTTTCTCCTCACTTGATGACTCAATTGCAACAGCAGCAGCATAGACTGCATCATCCTGTTCAGCAATCTGCAGGCTACTTGTCAGGTTTCCAGTCCCATTTATTTAATCCCCACCTTTCTCCTAGCTCATCCGTCAATAGCAAGTATGATCACAGACATAAATCAACTCAAAAAGGTAAACATAGTCATCGTTTATCACATCAGGGTTCTGATGCCAGTAGCCAAAAGAGTGAAAGCAGTTCATTACAATTTCGGTCCAAGCATATGACAAGTGATGAAATTGAGAGTATTCTTAGAATGCAGCTTGCTGTCACTCATAGTAATGATCCATACATAGATGACTATTACCACCAAGGTCGTCTTGCAAAAAAACCTTCTGTGGCCAAGTTAAAACATCCTTTCTGCCCAACCCAAATAAAGGAACTTCCTTCACGAACACGTTCCAGTAATGATCCTCATGCATTTCTTCAGGTTGATTCCCTAGGGAGGGTTTCATTTTCGTCTATTCGTCGGCCTCGCCCTCTTCTTGAGGCTGATTCTCCAAATTCTTCCATCCCTGGTAGCTCTGATTTAAAGATTTCAGAGAAGCCTCTAGAACAGGAGCCTACATTTGCTGCCAGAGTCACAATTGAGGACGGTCTTTGTCTTCTTCTTGATGTAGATGATATTGATCGTTTCCTACAGTCTAATCAGCCACAAGATGGTGGAACACAATTAAGACGAAGAAGGCAGGTTGGGCTTGCAGCTAAGGATGACCTTGTTTTCATAAGGATAGTATCTGTCCCTAAGGGACGCAAGCTCCTTGCGAAGTATCTTCAATTGCTTCTTCCTGGTAGTGACCTTATGCGGATAGTTTGCATGACCGTCCTTCGGCATTTAAGATTCTTATTTGGTGGTCTCCCCTCGGATCCAGCAGCTGCAGTGACTACATGCAACCTTGCCGAGGTTGTCTGCCAATGTATACGGGGAATGGATCTTGGTGCTCTTAGTGCCTGTCTTGCTGCAGTTGTTTGTTCTGCAGAGCATCCTCCTCTACGCCCTGTTGGAAGCACTGCTGGAGATGGTGCTTCCCTTATTTTGGTATCTGTTCTTGAGAGGGCTACCGAGCTTCTAACCGATCCACAAGCAGCCTGCAACTATAATATGGGTAATCGTTCCTTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTATTACTAAGTATTGCATGAATAAATACCACAGCATCATGCAGTCCCTCCTTATACAAAATGCACCAAATGTGGATGACATTGGATCAGATGCTGCTAAAGCAATTAGTAAGGAAATGCCTGTTGAACTCTTGCGTGCAAGCCTCCCCCACACTGATGACCACCAAAGGAAGTTATTGCTGGATTTCGCTCAGCGTTCTGTTCCCGTGATTGGATTTAACAGTAATGCTGGGGGGAGTGGAGGTCTTGTGAATTCAGAGACAGTGCTAAGTTGA
Protein sequence

>Msa1415720

MVDMDGFGGGGDLGGPPGSGDLRQLGHVPVSGGAVFDASQYAFFGKDAVQEVELGGLEEDAHLPTFESNEEEFFFNREQDEDVRSLSDIDDLTTTFWKLNKAVSGPRNPGVIGERGSRENSTSDLAQRDDVHNWFDQNAYDSEGSIDGKRWSSQPQSSLAHLQNSKSLYRTSSYPEQLRQEQNYHLQHCSSEPVHNWLDQHIYDIETAHDDKRWSSQPHTSIPHLHESTPLYRTSSYPDKQQELTRFSSEPILVQKSSFTSYPPPGGRSQQGSPSHSTGHLNIPYHTGAAAQLALSSQNRPHFSNSALQLSGLNLGSHFGGNTRQYPTGSSPLSQRIQNQLVNQAGLYPGDRSNLLSNMLQQQLQLHNGSVSPHLMTQLQQQQHRLHHPVQQSAGYLSGFQSHLFNPHLSPSSSVNSKYDHRHKSTQKGKHSHRLSHQGSDASSQKSESSSLQFRSKHMTSDEIESILRMQLAVTHSNDPYIDDYYHQGRLAKKPSVAKLKHPFCPTQIKELPSRTRSSNDPHAFLQVDSLGRVSFSSIRRPRPLLEADSPNSSIPGSSDLKISEKPLEQEPTFAARVTIEDGLCLLLDVDDIDRFLQSNQPQDGGTQLRRRRQVGLAAKDDLVFIRIVSVPKGRKLLAKYLQLLLPGSDLMRIVCMTVLRHLRFLFGGLPSDPAAAVTTCNLAEVVCQCIRGMDLGALSACLAAVVCSAEHPPLRPVGSTAGDGASLILVSVLERATELLTDPQAACNYNMGNRSFWQASFDEFFGLITKYCMNKYHSIMQSLLIQNAPNVDDIGSDAAKAISKEMPVELLRASLPHTDDHQRKLLLDFAQRSVPVIGFNSNAGGSGGLVNSETVLS*