AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0291980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291980 MtrunA17_Chr2g0312131 98.750 880 11 0 1 880 1 880 0.0 1790
Msa0291980 MtrunA17_Chr8g0358191 68.821 882 253 12 4 880 1 865 0.0 1079
Msa0291980 MtrunA17_Chr2g0312151 63.164 866 254 15 21 879 17 824 0.0 999
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291980 AT1G79090.2 46.789 872 356 19 4 857 1 782 0.0 666
Msa0291980 AT1G79090.1 46.789 872 356 19 4 857 1 782 0.0 666
Msa0291980 AT1G79090.3 46.789 872 356 19 4 857 1 782 0.0 666
Msa0291980 AT4G14990.1 45.698 860 356 18 34 878 22 785 0.0 646
Msa0291980 AT3G22270.1 50.145 690 299 13 196 878 129 780 0.0 619
Msa0291980 AT3G22270.1 44.643 168 69 7 35 194 24 175 2.44e-28 122
Msa0291980 AT4G14990.2 45.714 805 327 17 89 878 1 710 0.0 600

Find 253 sgRNAs with CRISPR-Local

Find 680 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGTCATGTTCCTGTTTC+AGG 0.132478 2_3:+40700832 Msa0291980:CDS
AGATGGTGCTTCCCTTATTT+TGG 0.157861 2_3:+40708962 Msa0291980:CDS
CCAATAACACCTGGGTTTCT+TGG 0.199570 2_3:-40706062 None:intergenic
AACCTATATCTCTACTTTCT+AGG 0.218300 2_3:+40700518 Msa0291980:five_prime_UTR
GTGAAGGAAGTTCCTTTATT+TGG 0.234831 2_3:-40708248 None:intergenic
CTTGGTGGACCTCCTGGTTC+TGG 0.255118 2_3:+40700796 Msa0291980:CDS
ATGAACTGCTTTCACTCTTT+TGG 0.256404 2_3:-40708059 None:intergenic
GCCTCATTTGATGAATTCTT+TGG 0.257973 2_3:+40709071 Msa0291980:CDS
AAAGGTGGGGATTAAATAAA+TGG 0.261654 2_3:-40707933 None:intergenic
AGCAGCCTGCAACTATAATA+TGG 0.261879 2_3:+40709028 Msa0291980:CDS
CAAGAACAGATACCAAAATA+AGG 0.266560 2_3:-40708974 None:intergenic
CAGCGTTCTGTTCCCGTGAT+TGG 0.272702 2_3:+40709287 Msa0291980:CDS
TTAGCACATGGGGTTGGATT+TGG 0.283811 2_3:-40700567 None:intergenic
TCATGCAATACTTAGTAATA+AGG 0.284117 2_3:-40709094 None:intergenic
CCAAGAAACCCAGGTGTTAT+TGG 0.287071 2_3:+40706062 Msa0291980:CDS
AAAGCAGTTCATTACAATTT+CGG 0.293418 2_3:+40708070 Msa0291980:CDS
CGGCATTTAAGATTCTTATT+TGG 0.294157 2_3:+40708774 Msa0291980:CDS
AGGTTGTCTGCCAATGTATA+CGG 0.295191 2_3:+40708847 Msa0291980:CDS
TTCTGGAGATCTTAGGCAAT+TGG 0.299001 2_3:+40700813 Msa0291980:CDS
GCATCACAATATGCATTCTT+TGG 0.300944 2_3:+40701943 Msa0291980:CDS
TGAAGGAAGTTCCTTTATTT+GGG 0.308138 2_3:-40708247 None:intergenic
CTACCAGGGATGGAAGAATT+TGG 0.312227 2_3:-40708378 None:intergenic
GCCGGGTGGTCGATCTCAAC+AGG 0.318303 2_3:+40707519 Msa0291980:CDS
TGATCCTCATGCATTTCTTC+AGG 0.318498 2_3:+40708287 Msa0291980:CDS
ATGGTGGATATGGATGGTTT+TGG 0.320645 2_3:+40700760 Msa0291980:CDS
ACCCTCCCAACTCGACTTCC+TGG 0.325057 2_3:-40701978 None:intergenic
CGCCCTGTTGGAAGCACTGC+TGG 0.336023 2_3:+40708939 Msa0291980:CDS
GAAGACTTCTGTACCAATAT+TGG 0.339254 2_3:-40707478 None:intergenic
AGACATAAATCAACTCAAAA+AGG 0.342250 2_3:+40707991 Msa0291980:CDS
TGCTCTTGCCTTAGCTGCTC+AGG 0.346127 2_3:-40707250 None:intergenic
GGTGATCTTGGTGGACCTCC+TGG 0.352995 2_3:+40700790 Msa0291980:CDS
ACGATCTTACAACCACCTTT+TGG 0.353378 2_3:+40702251 Msa0291980:CDS
ACTGCTTTACTCACTTTCTC+TGG 0.362656 2_3:-40706096 None:intergenic
ACTCAACTGTAGCGCAGAAT+TGG 0.363263 2_3:-40707638 None:intergenic
TATCTTCAATTGCTTCTTCC+TGG 0.363691 2_3:+40708714 Msa0291980:CDS
ATTACCCATATTATAGTTGC+AGG 0.364811 2_3:-40709033 None:intergenic
TCTCCAGCAGTGCTTCCAAC+AGG 0.371729 2_3:-40708942 None:intergenic
GCAAGGAGCTTGCGTCCCTT+AGG 0.374702 2_3:-40708687 None:intergenic
ACCCTGCTTGGTTGACCAAT+TGG 0.375153 2_3:-40707744 None:intergenic
TAGTCATCGTTTATCACATC+AGG 0.375229 2_3:+40708020 Msa0291980:CDS
TAGCCTGCAGATTGCTGAAC+AGG 0.386467 2_3:-40707892 None:intergenic
GCTGCTGCTCCAGTGTGATA+TGG 0.388425 2_3:-40707577 None:intergenic
TTTCTGCCCAACCCAAATAA+AGG 0.389774 2_3:+40708236 Msa0291980:CDS
ACTAGCTACTTCACTTCAAC+TGG 0.395783 2_3:+40708584 Msa0291980:CDS
ACGAAGAAGGCAGGTCCTAT+TGG 0.395900 2_3:+40708557 Msa0291980:CDS
ACTTCAACTGGTTGACCCGC+TGG 0.396374 2_3:+40708596 Msa0291980:CDS
AGGAGGTTGGACCGATCTCC+TGG 0.398000 2_3:-40707772 None:intergenic
CATGTAGTCACTGCAGCTGC+TGG 0.399596 2_3:-40708813 None:intergenic
ATATGGGTAATCGTTCCTTT+TGG 0.408815 2_3:+40709045 Msa0291980:CDS
AAAGAGACGATGTTCATAAC+TGG 0.409081 2_3:+40707107 Msa0291980:CDS
AAATGCATGAGGATCATTAC+TGG 0.409536 2_3:-40708280 None:intergenic
CCACCAAAGGAAGTTATTGC+TGG 0.410035 2_3:+40709256 Msa0291980:CDS
GATAGTGAAGGTTCAATTGA+TGG 0.416315 2_3:+40707148 Msa0291980:CDS
CAAGGTTGGGCTTGCAGCTA+AGG 0.417819 2_3:+40708632 Msa0291980:CDS
TTTCTTCAGGTTGATTCCCT+AGG 0.418382 2_3:+40708300 Msa0291980:CDS
TTCATCACTTGTCATATGCT+TGG 0.419448 2_3:-40708094 None:intergenic
ACCCTAGAAAGTAGAGATAT+AGG 0.419474 2_3:-40700520 None:intergenic
TAGACTCAAAAGTTGGCAAA+TGG 0.420140 2_3:-40702014 None:intergenic
CATTTAAGATTCTTATTTGG+TGG 0.421443 2_3:+40708777 Msa0291980:CDS
ACCTATATCTCTACTTTCTA+GGG 0.422926 2_3:+40700519 Msa0291980:five_prime_UTR
AATCCAGCAATAACTTCCTT+TGG 0.424237 2_3:-40709259 None:intergenic
ACAAACAACTGCAGCAAGAC+AGG 0.425389 2_3:-40708895 None:intergenic
CAATCTGCAGGCTACTTGTC+AGG 0.426282 2_3:+40707901 Msa0291980:CDS
GAAGTTCCTTTATTTGGGTT+GGG 0.427218 2_3:-40708242 None:intergenic
CCTTTGGTGGTCATCAGTGT+GGG 0.429608 2_3:-40709243 None:intergenic
CAACAACTACAGCTTCATAA+TGG 0.434498 2_3:+40707811 Msa0291980:CDS
ATTGGATTTAACAGTAATGC+TGG 0.437304 2_3:+40709305 Msa0291980:CDS
GGAAGTTCCTTTATTTGGGT+TGG 0.444412 2_3:-40708243 None:intergenic
CTTGCACGCAAGAGTTCAAC+AGG 0.445560 2_3:-40709215 None:intergenic
GATCCAATGTCATCCACATT+TGG 0.449177 2_3:-40709161 None:intergenic
TTTCACTTCTTATCCTCCGC+CGG 0.449353 2_3:+40707501 Msa0291980:CDS
GTAAGCTCCTGTTGTTTGTC+GGG 0.449579 2_3:-40707439 None:intergenic
TTCAGAGAAGCCTCTAGAAC+AGG 0.453266 2_3:+40708416 Msa0291980:CDS
CTCCTGGTTCTGGAGATCTT+AGG 0.453773 2_3:+40700806 Msa0291980:CDS
CAAGGAGCTTGCGTCCCTTA+GGG 0.453938 2_3:-40708686 None:intergenic
AGTTGAGTGGATTAAACCTT+GGG 0.454503 2_3:+40707653 Msa0291980:CDS
AAGAACAGATACCAAAATAA+GGG 0.457924 2_3:-40708973 None:intergenic
TGTATACGGGGAATGGATCT+TGG 0.460378 2_3:+40708861 Msa0291980:CDS
TTGCATCAGAAACCTGAAAC+AGG 0.461055 2_3:-40700844 None:intergenic
AACCAATTGGTCAACCAAGC+AGG 0.461811 2_3:+40707742 Msa0291980:CDS
CTAGTGAGCCAGTTCACAAC+TGG 0.463433 2_3:+40707296 Msa0291980:CDS
TCTGGAGATCTTAGGCAATT+GGG 0.465106 2_3:+40700814 Msa0291980:CDS
GAAAGGGGAAGATCTGTGAT+AGG 0.466355 2_3:-40700593 None:intergenic
TTCATATCCCGACAAACAAC+AGG 0.473230 2_3:+40707432 Msa0291980:CDS
AACCTTGGGTCACACTTTGG+TGG 0.473373 2_3:+40707667 Msa0291980:CDS
CTGGCTCACTAGAGCAATGT+TGG 0.473437 2_3:-40707285 None:intergenic
CTTTGGTAAAGATGCTGTCC+AGG 0.474602 2_3:+40701960 Msa0291980:CDS
TTAAACCTTGGGTCACACTT+TGG 0.475159 2_3:+40707664 Msa0291980:CDS
TTCTGTATTCGTTGACTAAG+AGG 0.475936 2_3:-40707721 None:intergenic
TTCTTCAGGTTGATTCCCTA+GGG 0.477004 2_3:+40708301 Msa0291980:CDS
TAGTTTGCATGACCGTCCTT+CGG 0.479765 2_3:+40708754 Msa0291980:CDS
CTTATTTGGTGGTCTCCCCT+CGG 0.481040 2_3:+40708788 Msa0291980:CDS
CTTCAACTGGTTGACCCGCT+GGG 0.483607 2_3:+40708597 Msa0291980:CDS
AGTAAGCTCCTGTTGTTTGT+CGG 0.486049 2_3:-40707440 None:intergenic
TTCACTTCTTATCCTCCGCC+GGG 0.486593 2_3:+40707502 Msa0291980:CDS
TCCTTTGGTGGTCATCAGTG+TGG 0.486707 2_3:-40709244 None:intergenic
CTGCCAATGTATACGGGGAA+TGG 0.488356 2_3:+40708854 Msa0291980:CDS
AAGTAGCTAGTCCTTCCAAT+AGG 0.488398 2_3:-40708572 None:intergenic
GTAAATGGGCAAGAGAAGAC+TGG 0.491821 2_3:-40707192 None:intergenic
TCCAGATTCTACATCTGATC+TGG 0.493925 2_3:+40707081 Msa0291980:intron
TGCTGCTAAAGCAATTAGTA+AGG 0.494076 2_3:+40709187 Msa0291980:CDS
AAACGTCAAAAGGAAGGAAA+GGG 0.494746 2_3:-40700609 None:intergenic
AGACTCAAAAGTTGGCAAAT+GGG 0.495998 2_3:-40702013 None:intergenic
CCAGCAATAACTTCCTTTGG+TGG 0.496773 2_3:-40709256 None:intergenic
TCTCCAAATTCTTCCATCCC+TGG 0.497208 2_3:+40708375 Msa0291980:CDS
TTTGGTATCTGTTCTTGAGA+GGG 0.497468 2_3:+40708980 Msa0291980:CDS
ACTGCAGCTGCTGGATCCGA+GGG 0.497845 2_3:-40708804 None:intergenic
TTTATTTGGGTTGGGCAGAA+AGG 0.497854 2_3:-40708234 None:intergenic
GCAGCCTGCAACTATAATAT+GGG 0.498589 2_3:+40709029 Msa0291980:CDS
TCAGGTTGATTCCCTAGGGA+GGG 0.499269 2_3:+40708305 Msa0291980:CDS
CTTCATATCCTGAGCAGCTA+AGG 0.502424 2_3:+40707242 Msa0291980:CDS
TGGTAATAGTCATCTATGTA+TGG 0.502833 2_3:-40708165 None:intergenic
GGTTGTCTGCCAATGTATAC+GGG 0.505882 2_3:+40708848 Msa0291980:CDS
GTTGGAAGCACTGCTGGAGA+TGG 0.505988 2_3:+40708945 Msa0291980:CDS
GCTGTCCAGGAAGTCGAGTT+GGG 0.505992 2_3:+40701973 Msa0291980:CDS
ATCAAATGAGGCCTGCCAAA+AGG 0.507360 2_3:-40709060 None:intergenic
ATGAAAATGAAACCCTCCCT+AGG 0.510049 2_3:-40708317 None:intergenic
AATTGTGTTCCACCATCTTG+TGG 0.510161 2_3:-40708531 None:intergenic
CCACGTTCACCAATAACACC+TGG 0.510228 2_3:-40706071 None:intergenic
AAGGATAGTATCTGTCCCTA+AGG 0.510426 2_3:+40708671 Msa0291980:CDS
TTATAGTTGCAGGCTGCTTG+TGG 0.511165 2_3:-40709023 None:intergenic
CATCCTGTTCAGCAATCTGC+AGG 0.513845 2_3:+40707889 Msa0291980:CDS
GTGATCATACTTGCTATTGA+CGG 0.514794 2_3:-40707968 None:intergenic
ACCGTCCTCAATTGTGACTC+TGG 0.515769 2_3:-40708454 None:intergenic
TGCTGTCCAGGAAGTCGAGT+TGG 0.516212 2_3:+40701972 Msa0291980:CDS
AAGGTGGGGATTAAATAAAT+GGG 0.518012 2_3:-40707932 None:intergenic
CATCCTCCTCTACGCCCTGT+TGG 0.518364 2_3:+40708927 Msa0291980:CDS
AGGAATTTAGCACATGGGGT+TGG 0.518740 2_3:-40700573 None:intergenic
GTTGCTGCAGCATATTACTA+AGG 0.519246 2_3:-40707792 None:intergenic
TCAACGAATACAGAACCAAT+TGG 0.519596 2_3:+40707729 Msa0291980:CDS
AACCAAGCAGGGTTATATCC+AGG 0.519950 2_3:+40707754 Msa0291980:CDS
GTGACTCTGGCAGCAAATGT+AGG 0.523060 2_3:-40708441 None:intergenic
GAAACGTCAAAAGGAAGGAA+AGG 0.523610 2_3:-40700610 None:intergenic
CCCTGTTGAGATCGACCACC+CGG 0.523910 2_3:-40707520 None:intergenic
TCATGCAAACTATCCGCATA+AGG 0.523978 2_3:-40708743 None:intergenic
TCTGTATTCGTTGACTAAGA+GGG 0.525367 2_3:-40707720 None:intergenic
CACTGGAGCAGCAGCTCAGT+TGG 0.526269 2_3:+40707585 Msa0291980:CDS
CTTGTGGCTGATTAGACTGT+AGG 0.526747 2_3:-40708515 None:intergenic
ATCTTTAAATCAGAGCTACC+AGG 0.529960 2_3:-40708393 None:intergenic
TCCTCATTAGACTCAAAAGT+TGG 0.531442 2_3:-40702021 None:intergenic
TTGTGGATCGGTTAGAAGCT+CGG 0.532013 2_3:-40709006 None:intergenic
TGATCAAGCCAGTTGTGAAC+TGG 0.534986 2_3:-40707304 None:intergenic
GCCAAAGAATTCATCAAATG+AGG 0.536456 2_3:-40709072 None:intergenic
TATACAAAATGCACCAAATG+TGG 0.537033 2_3:+40709148 Msa0291980:CDS
CAACATCCTTACCTTCCAAA+AGG 0.537944 2_3:-40702266 None:intergenic
CAGCATATTACTAAGGAGGT+TGG 0.537947 2_3:-40707785 None:intergenic
TTGGATTTAACAGTAATGCT+GGG 0.538008 2_3:+40709306 Msa0291980:CDS
GGATGAGCTAGGAGAAAGGT+GGG 0.538219 2_3:-40707947 None:intergenic
CACTGCAGCTGCTGGATCCG+AGG 0.538390 2_3:-40708805 None:intergenic
CTTTGGTGGTCATCAGTGTG+GGG 0.542028 2_3:-40709242 None:intergenic
CTCCTGGATATAACCCTGCT+TGG 0.542193 2_3:-40707756 None:intergenic
TCGGCCTCGCCCTCTTCTTG+AGG 0.542370 2_3:+40708347 Msa0291980:CDS
AATTCTGCGCTACAGTTGAG+TGG 0.543938 2_3:+40707640 Msa0291980:CDS
TTCAGGTTGATTCCCTAGGG+AGG 0.544020 2_3:+40708304 Msa0291980:CDS
TGCTGCCAGAGTCACAATTG+AGG 0.547539 2_3:+40708449 Msa0291980:CDS
CACTAGAGCAATGTTGGAGG+TGG 0.548928 2_3:-40707279 None:intergenic
GGGGATTAAATAAATGGGAC+TGG 0.549761 2_3:-40707927 None:intergenic
CAGTTGAGTGGATTAAACCT+TGG 0.552867 2_3:+40707652 Msa0291980:CDS
GTTAAAGAAGAAACGTCAAA+AGG 0.554784 2_3:-40700619 None:intergenic
TAAATCAGAGCTACCAGGGA+TGG 0.558565 2_3:-40708388 None:intergenic
GTTGCAGGCTGCTTGTGGAT+CGG 0.560942 2_3:-40709018 None:intergenic
AACACACGACAATATCCTAC+TGG 0.561844 2_3:+40707691 Msa0291980:CDS
ATTACTGTTAAATCCAATCA+CGG 0.565239 2_3:-40709300 None:intergenic
TAAATGGGCAAGAGAAGACT+GGG 0.566055 2_3:-40707191 None:intergenic
TGCCTAAGATCTCCAGAACC+AGG 0.566176 2_3:-40700808 None:intergenic
TTCCTGGTAGTGACCTTATG+CGG 0.567547 2_3:+40708730 Msa0291980:CDS
ACAATTAAGACGAAGAAGGC+AGG 0.569275 2_3:+40708548 Msa0291980:CDS
TCAGCCTCAAGAAGAGGGCG+AGG 0.570999 2_3:-40708351 None:intergenic
TCCAGGAAGTCGAGTTGGGA+GGG 0.571151 2_3:+40701977 Msa0291980:CDS
GTCCAGGAAGTCGAGTTGGG+AGG 0.571213 2_3:+40701976 Msa0291980:CDS
AAGTGGCCTGTACTATGACT+TGG 0.575535 2_3:-40707547 None:intergenic
TGAGATCGACCACCCGGCGG+AGG 0.575667 2_3:-40707514 None:intergenic
ATATGAAGATGTTCTGTACA+AGG 0.577232 2_3:-40707416 None:intergenic
ACCAATTGGTCAACCAAGCA+GGG 0.577462 2_3:+40707743 Msa0291980:CDS
TTGCTATTGACGGATGAGCT+AGG 0.577997 2_3:-40707958 None:intergenic
CAGTCTAATCAGCCACAAGA+TGG 0.578208 2_3:+40708519 Msa0291980:CDS
AAGAAGAAACGTCAAAAGGA+AGG 0.578534 2_3:-40700615 None:intergenic
TAGTTGAACAAGGCTGTCAG+TGG 0.579597 2_3:+40706038 Msa0291980:intron
GCACCAAATGTGGATGACAT+TGG 0.580947 2_3:+40709158 Msa0291980:CDS
CCAGGTGTTATTGGTGAACG+TGG 0.581152 2_3:+40706071 Msa0291980:CDS
GCTCACTAGAGCAATGTTGG+AGG 0.581610 2_3:-40707282 None:intergenic
TGAAAATGAAACCCTCCCTA+GGG 0.589056 2_3:-40708316 None:intergenic
GAACACAATTAAGACGAAGA+AGG 0.590498 2_3:+40708544 Msa0291980:CDS
GGTTCTCCAAGTCATAGTAC+AGG 0.591619 2_3:+40707541 Msa0291980:CDS
GAGAATCAGCCTCAAGAAGA+GGG 0.592961 2_3:-40708356 None:intergenic
TGACGGATGAGCTAGGAGAA+AGG 0.593268 2_3:-40707951 None:intergenic
GATCCATTCCCCGTATACAT+TGG 0.595501 2_3:-40708857 None:intergenic
CAGGGTTATATCCAGGAGAT+CGG 0.595838 2_3:+40707761 Msa0291980:CDS
ATAAGAATCTTAAATGCCGA+AGG 0.597513 2_3:-40708770 None:intergenic
CTCCAGCAGTGCTTCCAACA+GGG 0.598165 2_3:-40708941 None:intergenic
CGGATGAGCTAGGAGAAAGG+TGG 0.598260 2_3:-40707948 None:intergenic
TTTGGTGGTCATCAGTGTGG+GGG 0.599560 2_3:-40709241 None:intergenic
AGAAGGCAGGTCCTATTGGA+AGG 0.601061 2_3:+40708561 Msa0291980:CDS
TGGATTTAACAGTAATGCTG+GGG 0.602584 2_3:+40709307 Msa0291980:CDS
TGATTCGTGCAAGTGTGGAA+TGG 0.603595 2_3:-40707389 None:intergenic
ATATGAAGATGTTCTGTACA+AGG 0.605692 2_3:-40707227 None:intergenic
GGTGTTGATTCGTGCAAGTG+TGG 0.608028 2_3:-40707394 None:intergenic
TTCCACCAAAGTGTGACCCA+AGG 0.608336 2_3:-40707669 None:intergenic
CTGTATTCGTTGACTAAGAG+GGG 0.609537 2_3:-40707719 None:intergenic
GTGCTTCCAACAGGGCGTAG+AGG 0.609942 2_3:-40708933 None:intergenic
CTTCCAACAGGGCGTAGAGG+AGG 0.610367 2_3:-40708930 None:intergenic
GGAGAATCAGCCTCAAGAAG+AGG 0.611695 2_3:-40708357 None:intergenic
GTCAGTGGACCAAGAAACCC+AGG 0.612755 2_3:+40706053 Msa0291980:CDS
CCCACACTGATGACCACCAA+AGG 0.614049 2_3:+40709243 Msa0291980:CDS
ATCCGCATAAGGTCACTACC+AGG 0.615411 2_3:-40708732 None:intergenic
TGATAGGAATTTAGCACATG+GGG 0.615865 2_3:-40700577 None:intergenic
AATGTAGGCTCCTGTTCTAG+AGG 0.616073 2_3:-40708426 None:intergenic
GTGATAGGAATTTAGCACAT+GGG 0.616172 2_3:-40700578 None:intergenic
GAATCTTAAATGCCGAAGGA+CGG 0.616530 2_3:-40708766 None:intergenic
TTCAACTGGTTGACCCGCTG+GGG 0.620687 2_3:+40708598 Msa0291980:CDS
GCTGCAGCATATTACTAAGG+AGG 0.621104 2_3:-40707789 None:intergenic
CATCCTTACCTTCCAAAAGG+TGG 0.621852 2_3:-40702263 None:intergenic
CAGAATGCGTATGATAGTGA+AGG 0.623436 2_3:+40707136 Msa0291980:CDS
TGGGGTTGGATTTGGATCAG+AGG 0.626210 2_3:-40700559 None:intergenic
CGAGTTGGGAGGGTTAGAAG+AGG 0.630131 2_3:+40701987 Msa0291980:CDS
AGGATAGTATCTGTCCCTAA+GGG 0.631077 2_3:+40708672 Msa0291980:CDS
AGTCATCGTTTATCACATCA+GGG 0.632224 2_3:+40708021 Msa0291980:CDS
GCCAGAGTCACAATTGAGGA+CGG 0.634189 2_3:+40708453 Msa0291980:CDS
CACGTTCACCAATAACACCT+GGG 0.634807 2_3:-40706070 None:intergenic
TTACTGTTAAATCCAATCAC+GGG 0.636315 2_3:-40709299 None:intergenic
TCTAATCAGCCACAAGATGG+TGG 0.638420 2_3:+40708522 Msa0291980:CDS
GGATTTAACAGTAATGCTGG+GGG 0.646866 2_3:+40709308 Msa0291980:CDS
CCGGGTGGTCGATCTCAACA+GGG 0.647254 2_3:+40707520 Msa0291980:CDS
GACTACATGCAACCTTGCCG+AGG 0.648938 2_3:+40708827 Msa0291980:CDS
GCAATTGAAGATACTTCGCA+AGG 0.650941 2_3:-40708704 None:intergenic
TCAACCTGAAGAAATGCATG+AGG 0.652261 2_3:-40708291 None:intergenic
TGCAATTGAGTCATCAAGTG+AGG 0.653732 2_3:-40707844 None:intergenic
AGCGCAGAATTGGAGAAATG+TGG 0.654529 2_3:-40707628 None:intergenic
ATACTATCCTTATGAAAACA+AGG 0.654648 2_3:-40708659 None:intergenic
ACTTCTTATCCTCCGCCGGG+TGG 0.654695 2_3:+40707505 Msa0291980:CDS
TGTGATAGGAATTTAGCACA+TGG 0.657917 2_3:-40700579 None:intergenic
ATTGGCAGACAACCTCGGCA+AGG 0.658718 2_3:-40708839 None:intergenic
AACGTCAAAAGGAAGGAAAG+GGG 0.660531 2_3:-40700608 None:intergenic
TATACATTGGCAGACAACCT+CGG 0.660598 2_3:-40708844 None:intergenic
TTACTGGAACGTGTTCGTGA+AGG 0.662370 2_3:-40708264 None:intergenic
TATGAAGATGTTCTGTACAA+GGG 0.667003 2_3:-40707415 None:intergenic
GGAGGGACTGCATGATGCTG+TGG 0.671070 2_3:-40709124 None:intergenic
CTAAGAGGGGAGGAACCAGT+AGG 0.676397 2_3:-40707706 None:intergenic
TCTTTAAATCAGAGCTACCA+GGG 0.677000 2_3:-40708392 None:intergenic
TTGAACATTCCATATCACAC+TGG 0.678952 2_3:+40707568 Msa0291980:CDS
TTCGTGCAAGTGTGGAATGG+AGG 0.692522 2_3:-40707386 None:intergenic
TATTCGTTGACTAAGAGGGG+AGG 0.698688 2_3:-40707716 None:intergenic
CTGCAGCTGCTGGATCCGAG+GGG 0.699120 2_3:-40708803 None:intergenic
TGTGATATGGAATGTTCAAG+TGG 0.701817 2_3:-40707564 None:intergenic
CAGCTCATGATGACAAACGA+TGG 0.714656 2_3:+40707347 Msa0291980:CDS
GATGAGCTAGGAGAAAGGTG+GGG 0.715172 2_3:-40707946 None:intergenic
GTTGTCTGCCAATGTATACG+GGG 0.721058 2_3:+40708849 Msa0291980:CDS
AAGTGTGGAATGGAGGTATG+CGG 0.728702 2_3:-40707379 None:intergenic
GATTTAACAGTAATGCTGGG+GGG 0.734255 2_3:+40709309 Msa0291980:CDS
ATAGATGACTATTACCACCA+AGG 0.739114 2_3:+40708171 Msa0291980:CDS
CTAAGATCTCCAGAACCAGG+AGG 0.756897 2_3:-40700805 None:intergenic
TGTTGAGATCGACCACCCGG+CGG 0.777403 2_3:-40707517 None:intergenic
AAATGGGCAAGAGAAGACTG+GGG 0.800097 2_3:-40707190 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTTTTTTTTTTT+TGG + chr2_3:40701773-40701792 Msa0291980:intron 0.0%
!!! TATTTTTTTTTTTTTTTTTT+GGG + chr2_3:40701774-40701793 Msa0291980:intron 0.0%
!!! TTTAATTCTTTTTGTTTAAT+TGG + chr2_3:40700872-40700891 Msa0291980:intron 10.0%
!!! TTATTTAATTTGAGTTTTTT+TGG + chr2_3:40700955-40700974 Msa0291980:intron 10.0%
!! TATTATTATTATTCAATTGT+TGG - chr2_3:40703854-40703873 None:intergenic 10.0%
!! TAATAAAAGAAAAAGAAAAT+TGG - chr2_3:40706135-40706154 None:intergenic 10.0%
!! AAAGTTATTATCTATTTCAT+AGG + chr2_3:40701698-40701717 Msa0291980:intron 15.0%
!! AGATAAAATTATTATCTATG+TGG + chr2_3:40701737-40701756 Msa0291980:intron 15.0%
!!! TTTTTTTTTTTTTTTGGGTT+TGG + chr2_3:40701779-40701798 Msa0291980:intron 15.0%
!!! TTTAAGTAATTCTAAGAATT+TGG + chr2_3:40701870-40701889 Msa0291980:intron 15.0%
!! AATTGAACAGTTAAAAATTT+GGG + chr2_3:40703204-40703223 Msa0291980:intron 15.0%
!! AAAAACATCATAAAAAAACA+CGG + chr2_3:40703553-40703572 Msa0291980:intron 15.0%
!! TATAAATTTAGATTATCCTT+AGG + chr2_3:40704027-40704046 Msa0291980:intron 15.0%
!! TAAATGTAAATATTCAAAAG+CGG + chr2_3:40704421-40704440 Msa0291980:intron 15.0%
!!! TATGTTATTTATAAAGTGAT+TGG + chr2_3:40704610-40704629 Msa0291980:intron 15.0%
!!! ATTTGTATTTTTATTTGATG+TGG - chr2_3:40705278-40705297 None:intergenic 15.0%
!! ACATCAAATAAAAATACAAA+TGG + chr2_3:40705277-40705296 Msa0291980:intron 15.0%
!! TGATTATAAATAAAAAAGTG+TGG + chr2_3:40705487-40705506 Msa0291980:intron 15.0%
!!! GATTATAAATAAAAAAGTGT+GGG + chr2_3:40705488-40705507 Msa0291980:intron 15.0%
!! CAAACATATTTGAATATTAT+TGG + chr2_3:40705763-40705782 Msa0291980:intron 15.0%
!! AAATAAATTATGTCAAATTC+TGG + chr2_3:40706155-40706174 Msa0291980:intron 15.0%
!! AAAAAAGATTGAAACTTTGA+AGG - chr2_3:40700648-40700667 None:intergenic 20.0%
!!! TTGAGTTTTTTTGGTATAAT+TGG + chr2_3:40700964-40700983 Msa0291980:intron 20.0%
!! TCATTAATCAGTCATAAATA+AGG - chr2_3:40701415-40701434 None:intergenic 20.0%
!! CTTACTCTTATGTATAATTT+AGG + chr2_3:40701497-40701516 Msa0291980:intron 20.0%
!! AATTTAGAAGATATTGTTGT+GGG - chr2_3:40701619-40701638 None:intergenic 20.0%
!! AAATTTAGAAGATATTGTTG+TGG - chr2_3:40701620-40701639 None:intergenic 20.0%
!! AAAAATCAATAATAGACCAA+TGG - chr2_3:40701672-40701691 None:intergenic 20.0%
!!! TTACTTAAAATGAAAAGTAC+AGG - chr2_3:40701859-40701878 None:intergenic 20.0%
!! AAACATTACATCAATCATAT+AGG - chr2_3:40702445-40702464 None:intergenic 20.0%
!!! AACAAATGAATTTGAAATCA+TGG - chr2_3:40702548-40702567 None:intergenic 20.0%
!! CAATTGAACAGTTAAAAATT+TGG + chr2_3:40703203-40703222 Msa0291980:intron 20.0%
!! AATATTACTATTTAGTTGCT+AGG + chr2_3:40703230-40703249 Msa0291980:intron 20.0%
!! GTTTGATATTTATGTAGATT+GGG - chr2_3:40703531-40703550 None:intergenic 20.0%
!! AGTTTGATATTTATGTAGAT+TGG - chr2_3:40703532-40703551 None:intergenic 20.0%
!! AAAACATCATAAAAAAACAC+GGG + chr2_3:40703554-40703573 Msa0291980:intron 20.0%
!!! ATAAGCAAAGATTCATTTTA+AGG + chr2_3:40703702-40703721 Msa0291980:intron 20.0%
!! ATAATATAGACCAAATACAT+CGG - chr2_3:40703740-40703759 None:intergenic 20.0%
!! CATTGAATAAATGATATATC+TGG - chr2_3:40703766-40703785 None:intergenic 20.0%
!!! AAGCAAAAAAATCACTTTTA+AGG - chr2_3:40703791-40703810 None:intergenic 20.0%
!!! CTTTTTTTATGAAAAAGACA+GGG - chr2_3:40704295-40704314 None:intergenic 20.0%
!! TTTATATTCTTGTCTTACAT+TGG + chr2_3:40704554-40704573 Msa0291980:intron 20.0%
!! ATAACATAATAGCATAAAAC+AGG - chr2_3:40704598-40704617 None:intergenic 20.0%
!! CAAAACTTCATGAAAAATAT+TGG - chr2_3:40704670-40704689 None:intergenic 20.0%
!!! ATATTTTTCATGAAGTTTTG+CGG + chr2_3:40704670-40704689 Msa0291980:intron 20.0%
!!! AGGACTTGTTTTTTTTTTTT+GGG - chr2_3:40704793-40704812 None:intergenic 20.0%
!!! AAGGACTTGTTTTTTTTTTT+TGG - chr2_3:40704794-40704813 None:intergenic 20.0%
!! GAAATACCTTAAATAAGATA+TGG + chr2_3:40705089-40705108 Msa0291980:intron 20.0%
!!! TAAATCAGTTTTTTATTCTG+CGG - chr2_3:40705117-40705136 None:intergenic 20.0%
!! TTTCTTTATCTTCTCAATTT+GGG - chr2_3:40705225-40705244 None:intergenic 20.0%
!! ATTTCTTTATCTTCTCAATT+TGG - chr2_3:40705226-40705245 None:intergenic 20.0%
!!! TGCGTAATTTTTTTTATCTT+TGG + chr2_3:40705523-40705542 Msa0291980:intron 20.0%
!! ACCTATAAAAGAAAAACAAA+AGG + chr2_3:40705681-40705700 Msa0291980:intron 20.0%
!!! TCCTTTTGTTTTTCTTTTAT+AGG - chr2_3:40705685-40705704 None:intergenic 20.0%
!! AAATATCAAACAACTAACTT+TGG - chr2_3:40705816-40705835 None:intergenic 20.0%
!! AAATATCAAACAACTAACTT+TGG - chr2_3:40705816-40705835 None:intergenic 20.0%
!!! AATTTGATTTTAGTTGAACA+AGG + chr2_3:40706028-40706047 Msa0291980:intron 20.0%
!!! ATTTAATATTTTGAGTGAAC+AGG + chr2_3:40706196-40706215 Msa0291980:intron 20.0%
!!! TTAAATTCATGCATTGATAT+GGG + chr2_3:40706409-40706428 Msa0291980:intron 20.0%
!! AAATATCAGTTAGAAATCTT+AGG - chr2_3:40706604-40706623 None:intergenic 20.0%
!! TAACCTCATCTTAAAATATT+CGG - chr2_3:40706940-40706959 None:intergenic 20.0%
!!! TTTGTGTTGTTTAATTCATC+TGG + chr2_3:40700903-40700922 Msa0291980:intron 25.0%
!!! TTGTGTTGTTTAATTCATCT+GGG + chr2_3:40700904-40700923 Msa0291980:intron 25.0%
!! GAATTATTGTTGTGATGTTT+TGG + chr2_3:40701102-40701121 Msa0291980:intron 25.0%
! TAAACATTTGTATGTCTGTT+TGG - chr2_3:40701354-40701373 None:intergenic 25.0%
!!! TTTTTTTTTTTTGGGTTTGG+TGG + chr2_3:40701782-40701801 Msa0291980:intron 25.0%
!!! TTTTTTTTTTTGGGTTTGGT+GGG + chr2_3:40701783-40701802 Msa0291980:intron 25.0%
!!! GTTCTTTTTTAATAGAGAAC+AGG + chr2_3:40702047-40702066 Msa0291980:CDS 25.0%
!! GAATTTGAAATCATGGAAAA+CGG - chr2_3:40702541-40702560 None:intergenic 25.0%
!! TCTAGAACACTTAATATGAT+AGG - chr2_3:40702968-40702987 None:intergenic 25.0%
!! ACTATTGTCTAGTTTGAATA+TGG - chr2_3:40703012-40703031 None:intergenic 25.0%
! ATTCAAACTAGACAATAGTA+AGG + chr2_3:40703013-40703032 Msa0291980:intron 25.0%
! AGAAAACAATATACTGATCT+AGG + chr2_3:40703160-40703179 Msa0291980:intron 25.0%
! TTAACGGAGAAGATAAAATT+TGG + chr2_3:40703495-40703514 Msa0291980:intron 25.0%
! TAACGGAGAAGATAAAATTT+GGG + chr2_3:40703496-40703515 Msa0291980:intron 25.0%
!!! TTTTTGCTTTAAATAGTGAC+CGG + chr2_3:40703802-40703821 Msa0291980:intron 25.0%
! TTACTAAATAATACTTCCTC+CGG - chr2_3:40703824-40703843 None:intergenic 25.0%
!!! GCTGATTCTTTTACTAAATT+TGG + chr2_3:40704149-40704168 Msa0291980:intron 25.0%
!!! CCTTTTTTTATGAAAAAGAC+AGG - chr2_3:40704296-40704315 None:intergenic 25.0%
!!! CCTGTCTTTTTCATAAAAAA+AGG + chr2_3:40704293-40704312 Msa0291980:intron 25.0%
!! CTTCATGAAAAATATTGGTT+GGG - chr2_3:40704665-40704684 None:intergenic 25.0%
! ACTTCATGAAAAATATTGGT+TGG - chr2_3:40704666-40704685 None:intergenic 25.0%
! AACAAATAGCTTAAGCTTTA+GGG - chr2_3:40704715-40704734 None:intergenic 25.0%
! TAACAAATAGCTTAAGCTTT+AGG - chr2_3:40704716-40704735 None:intergenic 25.0%
!! TAAGCTATTTGTTAAATGCA+TGG + chr2_3:40704722-40704741 Msa0291980:intron 25.0%
!! AAGCTATTTGTTAAATGCAT+GGG + chr2_3:40704723-40704742 Msa0291980:intron 25.0%
! ATCTAAGTATGTTTCATAGA+AGG + chr2_3:40704993-40705012 Msa0291980:intron 25.0%
!! TTTTACTGAAAAACACAGTT+TGG + chr2_3:40705375-40705394 Msa0291980:intron 25.0%
! TTTACTGAAAAACACAGTTT+GGG + chr2_3:40705376-40705395 Msa0291980:intron 25.0%
! AATTCCAAAATTGCACATAT+AGG - chr2_3:40705895-40705914 None:intergenic 25.0%
! ATGTTTACTTCTATTCTTAG+AGG + chr2_3:40706316-40706335 Msa0291980:intron 25.0%
!! GTTAAATTCATGCATTGATA+TGG + chr2_3:40706408-40706427 Msa0291980:intron 25.0%
! ATACATCCTTTAAGTCAAAA+TGG - chr2_3:40706508-40706527 None:intergenic 25.0%
!! AGTTATTGTAGTTTGCAAAT+TGG - chr2_3:40706534-40706553 None:intergenic 25.0%
! TACAGTAATCAATAAACTTG+TGG - chr2_3:40706693-40706712 None:intergenic 25.0%
!! CAAGTTTATTGATTACTGTA+CGG + chr2_3:40706693-40706712 Msa0291980:intron 25.0%
! AGTCATAAAACTAATGATTG+AGG + chr2_3:40706815-40706834 Msa0291980:intron 25.0%
!! CTCTAGTATAATGATTTTTC+AGG + chr2_3:40706886-40706905 Msa0291980:intron 25.0%
!! GGACTTTGAATTTTGTAAAT+GGG - chr2_3:40707209-40707228 None:intergenic 25.0%
!! AGGACTTTGAATTTTGTAAA+TGG - chr2_3:40707210-40707229 None:intergenic 25.0%
! AGACATAAATCAACTCAAAA+AGG + chr2_3:40707991-40708010 Msa0291980:CDS 25.0%
! AAAGCAGTTCATTACAATTT+CGG + chr2_3:40708070-40708089 Msa0291980:CDS 25.0%
!! TTTCATTTTCATCTATTCGT+CGG + chr2_3:40708328-40708347 Msa0291980:CDS 25.0%
! ATACTATCCTTATGAAAACA+AGG - chr2_3:40708662-40708681 None:intergenic 25.0%
!! CATTTAAGATTCTTATTTGG+TGG + chr2_3:40708777-40708796 Msa0291980:CDS 25.0%
! AAGAACAGATACCAAAATAA+GGG - chr2_3:40708976-40708995 None:intergenic 25.0%
! TCATGCAATACTTAGTAATA+AGG - chr2_3:40709097-40709116 None:intergenic 25.0%
! ATTACTGTTAAATCCAATCA+CGG - chr2_3:40709303-40709322 None:intergenic 25.0%
AACCTATATCTCTACTTTCT+AGG + chr2_3:40700518-40700537 Msa0291980:five_prime_UTR 30.0%
ACCTATATCTCTACTTTCTA+GGG + chr2_3:40700519-40700538 Msa0291980:five_prime_UTR 30.0%
GTTAAAGAAGAAACGTCAAA+AGG - chr2_3:40700622-40700641 None:intergenic 30.0%
ACAAGCACTTACTATATAAG+TGG + chr2_3:40701175-40701194 Msa0291980:intron 30.0%
!! CTTATTTCTATTAGCTCTCT+AGG - chr2_3:40701285-40701304 None:intergenic 30.0%
!! TGATGATGTTTTTGTTATGC+AGG + chr2_3:40701904-40701923 Msa0291980:intron 30.0%
ATATGTGAATCGCATAAGAA+AGG - chr2_3:40702155-40702174 None:intergenic 30.0%
TCTTATGCGATTCACATATA+TGG + chr2_3:40702156-40702175 Msa0291980:intron 30.0%
! TATCACACTTTTCTGTATTC+TGG + chr2_3:40702298-40702317 Msa0291980:intron 30.0%
ACATCAATCATATAGGAAGT+AGG - chr2_3:40702438-40702457 None:intergenic 30.0%
! ATTTTTCACATGTCAGGTTT+AGG - chr2_3:40702874-40702893 None:intergenic 30.0%
! AGAAACATTTTTCACATGTC+AGG - chr2_3:40702880-40702899 None:intergenic 30.0%
GACATGTGAAAAATGTTTCT+TGG + chr2_3:40702880-40702899 Msa0291980:intron 30.0%
TTTCTTCTTGTCACAAGATT+AGG + chr2_3:40702907-40702926 Msa0291980:intron 30.0%
!! TAGAATCTAAGACCATTTTC+AGG + chr2_3:40703055-40703074 Msa0291980:intron 30.0%
CAAAAATCACAGGATTACAA+TGG - chr2_3:40703413-40703432 None:intergenic 30.0%
! CAGGGTTTATGTTATCTTTT+AGG + chr2_3:40703459-40703478 Msa0291980:intron 30.0%
!!! ATCTTTTAGGTTTAGCTACT+AGG + chr2_3:40703472-40703491 Msa0291980:intron 30.0%
!! AAAAAAAGTATTACTCCCTC+CGG + chr2_3:40703671-40703690 Msa0291980:intron 30.0%
TCTTTGCTTATAATAGTGAC+CGG - chr2_3:40703693-40703712 None:intergenic 30.0%
CATTGAATAACCGATGTATT+TGG + chr2_3:40703727-40703746 Msa0291980:intron 30.0%
TATTAAGCTTTCCCGTTATA+TGG + chr2_3:40704094-40704113 Msa0291980:intron 30.0%
!! AAATGACTCTAAAAGCATCT+AGG - chr2_3:40704251-40704270 None:intergenic 30.0%
! AGTCATTTGTGTTTCTGTTT+GGG + chr2_3:40704263-40704282 Msa0291980:intron 30.0%
AAGTGATTGGCATTTATTCT+TGG + chr2_3:40704623-40704642 Msa0291980:intron 30.0%
AGTGATTGGCATTTATTCTT+GGG + chr2_3:40704624-40704643 Msa0291980:intron 30.0%
! ACAAATAGCTTAAGCTTTAG+GGG - chr2_3:40704714-40704733 None:intergenic 30.0%
!! ATGCTATAAGAGGTATTATC+GGG - chr2_3:40704960-40704979 None:intergenic 30.0%
!! GATGCTATAAGAGGTATTAT+CGG - chr2_3:40704961-40704980 None:intergenic 30.0%
AAGTATGTTTCATAGAAGGA+TGG + chr2_3:40704997-40705016 Msa0291980:intron 30.0%
!! TTCTTTTTATGGTTGGTTGA+AGG - chr2_3:40705152-40705171 None:intergenic 30.0%
TTCAACCAACCATAAAAAGA+AGG + chr2_3:40705151-40705170 Msa0291980:intron 30.0%
TCAACCAACCATAAAAAGAA+GGG + chr2_3:40705152-40705171 Msa0291980:intron 30.0%
! ATGTGTGTAATTGTGTTTTC+TGG - chr2_3:40705197-40705216 None:intergenic 30.0%
!!! TTGTGTGTTTTAGAGAAAGA+AGG + chr2_3:40705400-40705419 Msa0291980:intron 30.0%
!!! TGTTTTAGAGAAAGAAGGAT+TGG + chr2_3:40705405-40705424 Msa0291980:intron 30.0%
!! TTTTGAGTGAACAGGAAAAT+TGG + chr2_3:40706204-40706223 Msa0291980:intron 30.0%
TTGTAACACATCAGTCAAAA+TGG + chr2_3:40706289-40706308 Msa0291980:intron 30.0%
ATGACATGTTAAACGAACAT+GGG + chr2_3:40706346-40706365 Msa0291980:intron 30.0%
TTTAGTAATGTGGGATCTAT+GGG - chr2_3:40706378-40706397 None:intergenic 30.0%
! TTTTAGTAATGTGGGATCTA+TGG - chr2_3:40706379-40706398 None:intergenic 30.0%
!!! TGACGTGTTTTTAGTAATGT+GGG - chr2_3:40706387-40706406 None:intergenic 30.0%
ATCAGAGATTCAGAGTATAA+TGG - chr2_3:40706629-40706648 None:intergenic 30.0%
!!! TTACTGTACGGTTTTTAAGT+AGG + chr2_3:40706705-40706724 Msa0291980:intron 30.0%
AACTTTCTCTACTCAAGAAA+AGG + chr2_3:40706729-40706748 Msa0291980:intron 30.0%
! TTTTATGACTACTTGATGCA+TGG - chr2_3:40706805-40706824 None:intergenic 30.0%
TAAAACTAATGATTGAGGAG+AGG + chr2_3:40706820-40706839 Msa0291980:intron 30.0%
! TTTAAGATCATTCATCTGAG+AGG + chr2_3:40706859-40706878 Msa0291980:intron 30.0%
!!! GTATAATGATTTTTCAGGTC+TGG + chr2_3:40706891-40706910 Msa0291980:intron 30.0%
!!! CATCCGAATATTTTAAGATG+AGG + chr2_3:40706934-40706953 Msa0291980:intron 30.0%
TATGTGTATCTTGTGTTCAA+AGG + chr2_3:40706958-40706977 Msa0291980:intron 30.0%
ATGTGTATCTTGTGTTCAAA+GGG + chr2_3:40706959-40706978 Msa0291980:intron 30.0%
TCAAAGGGACTATATAATGT+TGG + chr2_3:40706974-40706993 Msa0291980:intron 30.0%
CAAAGGGACTATATAATGTT+GGG + chr2_3:40706975-40706994 Msa0291980:intron 30.0%
AAAGAATGTCTACAGTGAAA+GGG - chr2_3:40707013-40707032 None:intergenic 30.0%
AAAAGAATGTCTACAGTGAA+AGG - chr2_3:40707014-40707033 None:intergenic 30.0%
GTTCAATTGATGGAAAAAGA+TGG + chr2_3:40707158-40707177 Msa0291980:CDS 30.0%
ATATGAAGATGTTCTGTACA+AGG - chr2_3:40707230-40707249 None:intergenic 30.0%
TATGAAGATGTTCTGTACAA+GGG - chr2_3:40707229-40707248 None:intergenic 30.0%
ATATGAAGATGTTCTGTACA+AGG - chr2_3:40707230-40707249 None:intergenic 30.0%
!! TTTTTCTAGTGAGCCAATAT+TGG + chr2_3:40707465-40707484 Msa0291980:CDS 30.0%
AAGGTGGGGATTAAATAAAT+GGG - chr2_3:40707935-40707954 None:intergenic 30.0%
AAAGGTGGGGATTAAATAAA+TGG - chr2_3:40707936-40707955 None:intergenic 30.0%
TGGTAATAGTCATCTATGTA+TGG - chr2_3:40708168-40708187 None:intergenic 30.0%
! TGAAGGAAGTTCCTTTATTT+GGG - chr2_3:40708250-40708269 None:intergenic 30.0%
ATAAGAATCTTAAATGCCGA+AGG - chr2_3:40708773-40708792 None:intergenic 30.0%
! CGGCATTTAAGATTCTTATT+TGG + chr2_3:40708774-40708793 Msa0291980:CDS 30.0%
CAAGAACAGATACCAAAATA+AGG - chr2_3:40708977-40708996 None:intergenic 30.0%
ATTACCCATATTATAGTTGC+AGG - chr2_3:40709036-40709055 None:intergenic 30.0%
!!! CATTTGGTGCATTTTGTATA+AGG - chr2_3:40709148-40709167 None:intergenic 30.0%
TATACAAAATGCACCAAATG+TGG + chr2_3:40709148-40709167 Msa0291980:CDS 30.0%
TTACTGTTAAATCCAATCAC+GGG - chr2_3:40709302-40709321 None:intergenic 30.0%
ATTGGATTTAACAGTAATGC+TGG + chr2_3:40709305-40709324 Msa0291980:CDS 30.0%
TTGGATTTAACAGTAATGCT+GGG + chr2_3:40709306-40709325 Msa0291980:CDS 30.0%
ACCCTAGAAAGTAGAGATAT+AGG - chr2_3:40700523-40700542 None:intergenic 35.0%
TGATAGGAATTTAGCACATG+GGG - chr2_3:40700580-40700599 None:intergenic 35.0%
GTGATAGGAATTTAGCACAT+GGG - chr2_3:40700581-40700600 None:intergenic 35.0%
TGTGATAGGAATTTAGCACA+TGG - chr2_3:40700582-40700601 None:intergenic 35.0%
AAACGTCAAAAGGAAGGAAA+GGG - chr2_3:40700612-40700631 None:intergenic 35.0%
AAGAAGAAACGTCAAAAGGA+AGG - chr2_3:40700618-40700637 None:intergenic 35.0%
! TTCAGCGTTTTTCATCTCAA+AGG + chr2_3:40700707-40700726 Msa0291980:five_prime_UTR 35.0%
! TCAGCGTTTTTCATCTCAAA+GGG + chr2_3:40700708-40700727 Msa0291980:five_prime_UTR 35.0%
!! CAATCACTCCTTCGTTTTTA+TGG + chr2_3:40700741-40700760 Msa0291980:exon 35.0%
CATATCCACCATAAAAACGA+AGG - chr2_3:40700752-40700771 None:intergenic 35.0%
!!! CTTCGTTTTTATGGTGGATA+TGG + chr2_3:40700750-40700769 Msa0291980:exon 35.0%
!!! GTTTTTATGGTGGATATGGA+TGG + chr2_3:40700754-40700773 Msa0291980:exon 35.0%
TCAAACAAACCAGATCTACA+TGG - chr2_3:40700930-40700949 None:intergenic 35.0%
AGTGCTTGTTCATACAAACA+GGG - chr2_3:40701164-40701183 None:intergenic 35.0%
AAGTGCTTGTTCATACAAAC+AGG - chr2_3:40701165-40701184 None:intergenic 35.0%
CTCTAATAAGCTAATCCAAC+AGG + chr2_3:40701388-40701407 Msa0291980:intron 35.0%
AGTCATAAATAAGGACCTGT+TGG - chr2_3:40701406-40701425 None:intergenic 35.0%
!!! GATTTTTTGCATCTGTGTGT+TGG + chr2_3:40701433-40701452 Msa0291980:intron 35.0%
CGTATTGTTTGTACTTCCAT+TGG + chr2_3:40701653-40701672 Msa0291980:intron 35.0%
!! TGATGTTTTTGTTATGCAGG+AGG + chr2_3:40701907-40701926 Msa0291980:intron 35.0%
GCATCACAATATGCATTCTT+TGG + chr2_3:40701943-40701962 Msa0291980:CDS 35.0%
AGACTCAAAAGTTGGCAAAT+GGG - chr2_3:40702016-40702035 None:intergenic 35.0%
TAGACTCAAAAGTTGGCAAA+TGG - chr2_3:40702017-40702036 None:intergenic 35.0%
TCCTCATTAGACTCAAAAGT+TGG - chr2_3:40702024-40702043 None:intergenic 35.0%
!! AACTTTTGAGTCTAATGAGG+AGG + chr2_3:40702023-40702042 Msa0291980:CDS 35.0%
TCGCATAAGAAAGGAAAAGA+GGG - chr2_3:40702146-40702165 None:intergenic 35.0%
ATCGCATAAGAAAGGAAAAG+AGG - chr2_3:40702147-40702166 None:intergenic 35.0%
AAAGTTTCTCAGTTTCCATG+AGG + chr2_3:40702574-40702593 Msa0291980:intron 35.0%
TCTCTCATAGTTGACAAATC+TGG - chr2_3:40702628-40702647 None:intergenic 35.0%
TCATGCACTTAAGTTAGTTC+AGG + chr2_3:40702722-40702741 Msa0291980:intron 35.0%
CATGCACTTAAGTTAGTTCA+GGG + chr2_3:40702723-40702742 Msa0291980:intron 35.0%
ATACTCAACAAGCATAGGAT+AGG - chr2_3:40702769-40702788 None:intergenic 35.0%
! TATCCTATGCTTGTTGAGTA+TGG + chr2_3:40702768-40702787 Msa0291980:intron 35.0%
ACCAAGATAGCATACAACAA+GGG - chr2_3:40702801-40702820 None:intergenic 35.0%
AACCAAGATAGCATACAACA+AGG - chr2_3:40702802-40702821 None:intergenic 35.0%
TGTTGTATGCTATCTTGGTT+AGG + chr2_3:40702802-40702821 Msa0291980:intron 35.0%
GTTGTATGCTATCTTGGTTA+GGG + chr2_3:40702803-40702822 Msa0291980:intron 35.0%
GTTAGGGTTTCTATGATTGT+TGG + chr2_3:40702819-40702838 Msa0291980:intron 35.0%
! GTCTAGTTTGAATATGGACT+TGG - chr2_3:40703006-40703025 None:intergenic 35.0%
AAATCAACAACGCCTGAAAA+TGG - chr2_3:40703070-40703089 None:intergenic 35.0%
AGTTGCTAGGTAGTTAATAG+TGG + chr2_3:40703243-40703262 Msa0291980:intron 35.0%
ATAAACCCTGTAACAAACTC+CGG - chr2_3:40703449-40703468 None:intergenic 35.0%
AGGTTTAGCTACTAGGTTAA+CGG + chr2_3:40703479-40703498 Msa0291980:intron 35.0%
AGATAAAATTTGGGCCCTTA+AGG + chr2_3:40703505-40703524 Msa0291980:intron 35.0%
TTATGTAGATTGGGCCTTAA+GGG - chr2_3:40703522-40703541 None:intergenic 35.0%
TTTATGTAGATTGGGCCTTA+AGG - chr2_3:40703523-40703542 None:intergenic 35.0%
! TAAATGCCCAAGGTATTCAA+AGG - chr2_3:40703580-40703599 None:intergenic 35.0%
ATACCTTGGGCATTTAGAAA+AGG + chr2_3:40703584-40703603 Msa0291980:intron 35.0%
GAAAAGGCAATAGTAGTTAC+TGG + chr2_3:40703600-40703619 Msa0291980:intron 35.0%
AAGGCAAGAGAGGAAAAATT+AGG - chr2_3:40704200-40704219 None:intergenic 35.0%
AGAATTTCAATCTGCCAACA+AGG - chr2_3:40704219-40704238 None:intergenic 35.0%
! GAGTCATTTGTGTTTCTGTT+TGG + chr2_3:40704262-40704281 Msa0291980:intron 35.0%
! GTCATTTGTGTTTCTGTTTG+GGG + chr2_3:40704264-40704283 Msa0291980:intron 35.0%
TGGGATCGACAACTATATTT+GGG + chr2_3:40704495-40704514 Msa0291980:intron 35.0%
ATTCTTGTCTTACATTGGTC+AGG + chr2_3:40704559-40704578 Msa0291980:intron 35.0%
! TGAAAAATATTGGTTGGGTC+AGG - chr2_3:40704660-40704679 None:intergenic 35.0%
! ATGCTACTTGATGTTTGACT+TGG + chr2_3:40704763-40704782 Msa0291980:intron 35.0%
! TGCTACTTGATGTTTGACTT+GGG + chr2_3:40704764-40704783 Msa0291980:intron 35.0%
GGGGATAAAACATAAGGAAA+GGG - chr2_3:40705024-40705043 None:intergenic 35.0%
TGGGGATAAAACATAAGGAA+AGG - chr2_3:40705025-40705044 None:intergenic 35.0%
! TCCTTATGTTTTATCCCCAT+TGG + chr2_3:40705026-40705045 Msa0291980:intron 35.0%
TCCAATGGGGATAAAACATA+AGG - chr2_3:40705030-40705049 None:intergenic 35.0%
! TTATGTTTTATCCCCATTGG+AGG + chr2_3:40705029-40705048 Msa0291980:intron 35.0%
! GCGGTACCATATCTTATTTA+AGG - chr2_3:40705098-40705117 None:intergenic 35.0%
CAACCAACCATAAAAAGAAG+GGG + chr2_3:40705153-40705172 Msa0291980:intron 35.0%
AACCAACCATAAAAAGAAGG+GGG + chr2_3:40705154-40705173 Msa0291980:intron 35.0%
ATGGCTGAAAAAATGTGAGA+TGG + chr2_3:40705296-40705315 Msa0291980:intron 35.0%
GCATTCATTGCTGAGAAAAT+AGG - chr2_3:40705574-40705593 None:intergenic 35.0%
AGGAATTAAATTCCCAGGAA+AGG - chr2_3:40705619-40705638 None:intergenic 35.0%
TCCTGGGAATTTAATTCCTA+TGG + chr2_3:40705620-40705639 Msa0291980:intron 35.0%
ACCATAGGAATTAAATTCCC+AGG - chr2_3:40705624-40705643 None:intergenic 35.0%
AACTTAGCATTAGCAACCAT+AGG - chr2_3:40705639-40705658 None:intergenic 35.0%
!! TCTGATTAGCTTGCTTTCTT+AGG + chr2_3:40705735-40705754 Msa0291980:intron 35.0%
! GCTACCTATATGTGCAATTT+TGG + chr2_3:40705888-40705907 Msa0291980:intron 35.0%
AGTCCTTGAATTTAGCGAAA+CGG + chr2_3:40706249-40706268 Msa0291980:intron 35.0%
TTTCCGTTTCGCTAAATTCA+AGG - chr2_3:40706255-40706274 None:intergenic 35.0%
TCGTTTAACATGTCATGTCT+TGG - chr2_3:40706342-40706361 None:intergenic 35.0%
CATGACATGTTAAACGAACA+TGG + chr2_3:40706345-40706364 Msa0291980:intron 35.0%
TGACATGTTAAACGAACATG+GGG + chr2_3:40706347-40706366 Msa0291980:intron 35.0%
TTAGTAATGTGGGATCTATG+GGG - chr2_3:40706377-40706396 None:intergenic 35.0%
!!! GTGACGTGTTTTTAGTAATG+TGG - chr2_3:40706388-40706407 None:intergenic 35.0%
GGCACACTAAATAAACATGT+GGG - chr2_3:40706448-40706467 None:intergenic 35.0%
TGGCACACTAAATAAACATG+TGG - chr2_3:40706449-40706468 None:intergenic 35.0%
TAGAAATCTTAGGAGCGAAT+AGG - chr2_3:40706594-40706613 None:intergenic 35.0%
!!! GTTGAGAGTTTTTTCAACCA+TGG + chr2_3:40706662-40706681 Msa0291980:intron 35.0%
ATAAACTTGTGGCAAAACCA+TGG - chr2_3:40706682-40706701 None:intergenic 35.0%
TGATGCATGGCAATAATGAA+TGG - chr2_3:40706792-40706811 None:intergenic 35.0%
AAGAATGTCTACAGTGAAAG+GGG - chr2_3:40707012-40707031 None:intergenic 35.0%
AAAGAGACGATGTTCATAAC+TGG + chr2_3:40707107-40707126 Msa0291980:CDS 35.0%
GATAGTGAAGGTTCAATTGA+TGG + chr2_3:40707148-40707167 Msa0291980:CDS 35.0%
GAAGACTTCTGTACCAATAT+TGG - chr2_3:40707481-40707500 None:intergenic 35.0%
TGTGATATGGAATGTTCAAG+TGG - chr2_3:40707567-40707586 None:intergenic 35.0%
TTGAACATTCCATATCACAC+TGG + chr2_3:40707568-40707587 Msa0291980:CDS 35.0%
!! AGTTGAGTGGATTAAACCTT+GGG + chr2_3:40707653-40707672 Msa0291980:CDS 35.0%
! TCTGTATTCGTTGACTAAGA+GGG - chr2_3:40707723-40707742 None:intergenic 35.0%
! TTCTGTATTCGTTGACTAAG+AGG - chr2_3:40707724-40707743 None:intergenic 35.0%
TCAACGAATACAGAACCAAT+TGG + chr2_3:40707729-40707748 Msa0291980:CDS 35.0%
CAACAACTACAGCTTCATAA+TGG + chr2_3:40707811-40707830 Msa0291980:CDS 35.0%
!! GTGATCATACTTGCTATTGA+CGG - chr2_3:40707971-40707990 None:intergenic 35.0%
TAGTCATCGTTTATCACATC+AGG + chr2_3:40708020-40708039 Msa0291980:CDS 35.0%
AGTCATCGTTTATCACATCA+GGG + chr2_3:40708021-40708040 Msa0291980:CDS 35.0%
! ATGAACTGCTTTCACTCTTT+TGG - chr2_3:40708062-40708081 None:intergenic 35.0%
TTCATCACTTGTCATATGCT+TGG - chr2_3:40708097-40708116 None:intergenic 35.0%
ATAGATGACTATTACCACCA+AGG + chr2_3:40708171-40708190 Msa0291980:CDS 35.0%
TCTTGCAAAAAAACCTTCTG+TGG + chr2_3:40708197-40708216 Msa0291980:CDS 35.0%
!!! GCAGAAAGGATGTTTTAACT+TGG - chr2_3:40708223-40708242 None:intergenic 35.0%
! GAAGTTCCTTTATTTGGGTT+GGG - chr2_3:40708245-40708264 None:intergenic 35.0%
GTGAAGGAAGTTCCTTTATT+TGG - chr2_3:40708251-40708270 None:intergenic 35.0%
AAATGCATGAGGATCATTAC+TGG - chr2_3:40708283-40708302 None:intergenic 35.0%
TCTTTAAATCAGAGCTACCA+GGG - chr2_3:40708395-40708414 None:intergenic 35.0%
ATCTTTAAATCAGAGCTACC+AGG - chr2_3:40708396-40708415 None:intergenic 35.0%
GAACACAATTAAGACGAAGA+AGG + chr2_3:40708544-40708563 Msa0291980:CDS 35.0%
!!! AGGATGACCTTGTTTTCATA+AGG + chr2_3:40708652-40708671 Msa0291980:CDS 35.0%
TATCTTCAATTGCTTCTTCC+TGG + chr2_3:40708714-40708733 Msa0291980:CDS 35.0%
! TTTTGGTATCTGTTCTTGAG+AGG + chr2_3:40708979-40708998 Msa0291980:CDS 35.0%
TTTGGTATCTGTTCTTGAGA+GGG + chr2_3:40708980-40708999 Msa0291980:CDS 35.0%
! ATATGGGTAATCGTTCCTTT+TGG + chr2_3:40709045-40709064 Msa0291980:CDS 35.0%
GCCTCATTTGATGAATTCTT+TGG + chr2_3:40709071-40709090 Msa0291980:CDS 35.0%
GCCAAAGAATTCATCAAATG+AGG - chr2_3:40709075-40709094 None:intergenic 35.0%
! TGGTGCATTTTGTATAAGGA+GGG - chr2_3:40709144-40709163 None:intergenic 35.0%
! TTGGTGCATTTTGTATAAGG+AGG - chr2_3:40709145-40709164 None:intergenic 35.0%
TGCTGCTAAAGCAATTAGTA+AGG + chr2_3:40709187-40709206 Msa0291980:CDS 35.0%
AATCCAGCAATAACTTCCTT+TGG - chr2_3:40709262-40709281 None:intergenic 35.0%
TGGATTTAACAGTAATGCTG+GGG + chr2_3:40709307-40709326 Msa0291980:CDS 35.0%
AACGTCAAAAGGAAGGAAAG+GGG - chr2_3:40700611-40700630 None:intergenic 40.0%
GAAACGTCAAAAGGAAGGAA+AGG - chr2_3:40700613-40700632 None:intergenic 40.0%
!! TCACTCCTTCGTTTTTATGG+TGG + chr2_3:40700744-40700763 Msa0291980:exon 40.0%
!!! ATGGTGGATATGGATGGTTT+TGG + chr2_3:40700760-40700779 Msa0291980:CDS 40.0%
!!! ATATGGATGGTTTTGGAGGT+GGG + chr2_3:40700767-40700786 Msa0291980:CDS 40.0%
! TTCTGGAGATCTTAGGCAAT+TGG + chr2_3:40700813-40700832 Msa0291980:CDS 40.0%
TCTGGAGATCTTAGGCAATT+GGG + chr2_3:40700814-40700833 Msa0291980:CDS 40.0%
TTGCATCAGAAACCTGAAAC+AGG - chr2_3:40700847-40700866 None:intergenic 40.0%
! TTTTTGCATCTGTGTGTTGG+AGG + chr2_3:40701436-40701455 Msa0291980:intron 40.0%
! TTTTGCATCTGTGTGTTGGA+GGG + chr2_3:40701437-40701456 Msa0291980:intron 40.0%
!! GGACAGTTTAATTTGCCACA+AGG + chr2_3:40701518-40701537 Msa0291980:intron 40.0%
! ACTATAACCTAAGCACTGTC+TGG - chr2_3:40701549-40701568 None:intergenic 40.0%
!! TTTGGGTTTGGTGGGAATTA+TGG + chr2_3:40701791-40701810 Msa0291980:intron 40.0%
!! GCCAACTTTTGAGTCTAATG+AGG + chr2_3:40702020-40702039 Msa0291980:CDS 40.0%
TCTCTCAAAATTCACGTGTC+TGG + chr2_3:40702099-40702118 Msa0291980:intron 40.0%
GCAAAGTGAGAGTGAATGTT+AGG - chr2_3:40702198-40702217 None:intergenic 40.0%
AACATTCACTCTCACTTTGC+AGG + chr2_3:40702198-40702217 Msa0291980:intron 40.0%
! ACGATCTTACAACCACCTTT+TGG + chr2_3:40702251-40702270 Msa0291980:CDS 40.0%
! TCTTACAACCACCTTTTGGA+AGG + chr2_3:40702255-40702274 Msa0291980:CDS 40.0%
CAACATCCTTACCTTCCAAA+AGG - chr2_3:40702269-40702288 None:intergenic 40.0%
! CACACTTTTCTGTATTCTGG+AGG + chr2_3:40702301-40702320 Msa0291980:intron 40.0%
CTTGTTTCAGTTCTTCCTCA+TGG - chr2_3:40702592-40702611 None:intergenic 40.0%
GGAAGAACTGAAACAAGTCA+CGG + chr2_3:40702595-40702614 Msa0291980:intron 40.0%
GAAGAACTGAAACAAGTCAC+GGG + chr2_3:40702596-40702615 Msa0291980:intron 40.0%
AGTGCAACTGAAACAAGTCA+CGG + chr2_3:40702666-40702685 Msa0291980:intron 40.0%
AGACCATACTCAACAAGCAT+AGG - chr2_3:40702774-40702793 None:intergenic 40.0%
CCAAGATAGCATACAACAAG+GGG - chr2_3:40702800-40702819 None:intergenic 40.0%
! GTTTAGGATCTTCAACTCTC+TGG - chr2_3:40702858-40702877 None:intergenic 40.0%
CAATAGTAAGGTAGCAGACA+TGG + chr2_3:40703025-40703044 Msa0291980:intron 40.0%
AGCAGTAAAGGGATATGGAA+TGG + chr2_3:40703113-40703132 Msa0291980:intron 40.0%
GCAGTAAAGGGATATGGAAT+GGG + chr2_3:40703114-40703133 Msa0291980:intron 40.0%
CAGTAAAGGGATATGGAATG+GGG + chr2_3:40703115-40703134 Msa0291980:intron 40.0%
!! TTCTAGAATGATACGTCACG+TGG - chr2_3:40703144-40703163 None:intergenic 40.0%
AACAGTGAAACTTAGGGCAT+TGG + chr2_3:40703315-40703334 Msa0291980:intron 40.0%
!! ACTTAGGGCATTGGACATTA+AGG + chr2_3:40703324-40703343 Msa0291980:intron 40.0%
!! CTTAGGGCATTGGACATTAA+GGG + chr2_3:40703325-40703344 Msa0291980:intron 40.0%
!! TTAGGGCATTGGACATTAAG+GGG + chr2_3:40703326-40703345 Msa0291980:intron 40.0%
TAAACCCTGTAACAAACTCC+GGG - chr2_3:40703448-40703467 None:intergenic 40.0%
! TTGCCTTTTCTAAATGCCCA+AGG - chr2_3:40703590-40703609 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr2_3:40703689-40703708 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr2_3:40703690-40703709 None:intergenic 40.0%
! TTGCTTTAAATAGTGACCGG+AGG + chr2_3:40703805-40703824 Msa0291980:intron 40.0%
! TCCTTAGGTACTGTTTCTTG+AGG + chr2_3:40704042-40704061 Msa0291980:intron 40.0%
TCCTCAAGAAACAGTACCTA+AGG - chr2_3:40704046-40704065 None:intergenic 40.0%
! TTTTTCCTCTCTTGCCTTGT+TGG + chr2_3:40704202-40704221 Msa0291980:intron 40.0%
TCTGCATGTTATCCCAGTTT+CGG + chr2_3:40704451-40704470 Msa0291980:intron 40.0%
CTGGGATCGACAACTATATT+TGG + chr2_3:40704494-40704513 Msa0291980:intron 40.0%
GATCGACAACTATATTTGGG+TGG + chr2_3:40704498-40704517 Msa0291980:intron 40.0%
! ACTATATTTGGGTGGTGGTT+TGG + chr2_3:40704506-40704525 Msa0291980:intron 40.0%
ATACTATTGTTAGTTCCCCG+AGG - chr2_3:40704532-40704551 None:intergenic 40.0%
ATTTATTCTTGGGCTTTGCC+TGG + chr2_3:40704634-40704653 Msa0291980:intron 40.0%
TGAAGGGTGGTGATATGATA+AGG - chr2_3:40704813-40704832 None:intergenic 40.0%
!! TTAAGGGTACCCAAAGTACT+TGG - chr2_3:40704898-40704917 None:intergenic 40.0%
CTCTTATAGCATCTCCAGTA+GGG + chr2_3:40704968-40704987 Msa0291980:intron 40.0%
TCTTATAGCATCTCCAGTAG+GGG + chr2_3:40704969-40704988 Msa0291980:intron 40.0%
ACATACTTAGATACCCCTAC+TGG - chr2_3:40704985-40705004 None:intergenic 40.0%
ACCAACCATAAAAAGAAGGG+GGG + chr2_3:40705155-40705174 Msa0291980:intron 40.0%
ATGGAAGCGAAATTGAGTGT+GGG + chr2_3:40705315-40705334 Msa0291980:intron 40.0%
! TTTTCCCTTTTGCCTTTCCT+GGG + chr2_3:40705604-40705623 Msa0291980:intron 40.0%
AATTCCCAGGAAAGGCAAAA+GGG - chr2_3:40705611-40705630 None:intergenic 40.0%
AAATTCCCAGGAAAGGCAAA+AGG - chr2_3:40705612-40705631 None:intergenic 40.0%
ACTGCTTTACTCACTTTCTC+TGG - chr2_3:40706099-40706118 None:intergenic 40.0%
TAGCAGCAGAAGTTAACAGA+GGG + chr2_3:40706481-40706500 Msa0291980:intron 40.0%
!!! GAGGGACCATTTTGACTTAA+AGG + chr2_3:40706499-40706518 Msa0291980:intron 40.0%
AGAATGTCTACAGTGAAAGG+GGG - chr2_3:40707011-40707030 None:intergenic 40.0%
CAGATGTAGAATCTGGATAG+TGG - chr2_3:40707078-40707097 None:intergenic 40.0%
TCCAGATTCTACATCTGATC+TGG + chr2_3:40707081-40707100 Msa0291980:intron 40.0%
! CAGAATGCGTATGATAGTGA+AGG + chr2_3:40707136-40707155 Msa0291980:CDS 40.0%
TAAATGGGCAAGAGAAGACT+GGG - chr2_3:40707194-40707213 None:intergenic 40.0%
TTCATATCCCGACAAACAAC+AGG + chr2_3:40707432-40707451 Msa0291980:CDS 40.0%
! AGTAAGCTCCTGTTGTTTGT+CGG - chr2_3:40707443-40707462 None:intergenic 40.0%
!! CAGTTGAGTGGATTAAACCT+TGG + chr2_3:40707652-40707671 Msa0291980:CDS 40.0%
TTAAACCTTGGGTCACACTT+TGG + chr2_3:40707664-40707683 Msa0291980:CDS 40.0%
AACACACGACAATATCCTAC+TGG + chr2_3:40707691-40707710 Msa0291980:CDS 40.0%
! CTGTATTCGTTGACTAAGAG+GGG - chr2_3:40707722-40707741 None:intergenic 40.0%
CAGCATATTACTAAGGAGGT+TGG - chr2_3:40707788-40707807 None:intergenic 40.0%
GTTGCTGCAGCATATTACTA+AGG - chr2_3:40707795-40707814 None:intergenic 40.0%
TGCAATTGAGTCATCAAGTG+AGG - chr2_3:40707847-40707866 None:intergenic 40.0%
GGGGATTAAATAAATGGGAC+TGG - chr2_3:40707930-40707949 None:intergenic 40.0%
!!! GTTTTTTTGCAAGACGACCT+TGG - chr2_3:40708191-40708210 None:intergenic 40.0%
!!! TGTTTTAACTTGGCCACAGA+AGG - chr2_3:40708213-40708232 None:intergenic 40.0%
!! TTTATTTGGGTTGGGCAGAA+AGG - chr2_3:40708237-40708256 None:intergenic 40.0%
TTTCTGCCCAACCCAAATAA+AGG + chr2_3:40708236-40708255 Msa0291980:CDS 40.0%
! GGAAGTTCCTTTATTTGGGT+TGG - chr2_3:40708246-40708265 None:intergenic 40.0%
TGATCCTCATGCATTTCTTC+AGG + chr2_3:40708287-40708306 Msa0291980:CDS 40.0%
TCAACCTGAAGAAATGCATG+AGG - chr2_3:40708294-40708313 None:intergenic 40.0%
!! TTTCTTCAGGTTGATTCCCT+AGG + chr2_3:40708300-40708319 Msa0291980:CDS 40.0%
!! TTCTTCAGGTTGATTCCCTA+GGG + chr2_3:40708301-40708320 Msa0291980:CDS 40.0%
TGAAAATGAAACCCTCCCTA+GGG - chr2_3:40708319-40708338 None:intergenic 40.0%
ATGAAAATGAAACCCTCCCT+AGG - chr2_3:40708320-40708339 None:intergenic 40.0%
AATTGTGTTCCACCATCTTG+TGG - chr2_3:40708534-40708553 None:intergenic 40.0%
ACAATTAAGACGAAGAAGGC+AGG + chr2_3:40708548-40708567 Msa0291980:CDS 40.0%
AAGTAGCTAGTCCTTCCAAT+AGG - chr2_3:40708575-40708594 None:intergenic 40.0%
ACTAGCTACTTCACTTCAAC+TGG + chr2_3:40708584-40708603 Msa0291980:CDS 40.0%
AAGGATAGTATCTGTCCCTA+AGG + chr2_3:40708671-40708690 Msa0291980:CDS 40.0%
AGGATAGTATCTGTCCCTAA+GGG + chr2_3:40708672-40708691 Msa0291980:CDS 40.0%
GCAATTGAAGATACTTCGCA+AGG - chr2_3:40708707-40708726 None:intergenic 40.0%
TCATGCAAACTATCCGCATA+AGG - chr2_3:40708746-40708765 None:intergenic 40.0%
GAATCTTAAATGCCGAAGGA+CGG - chr2_3:40708769-40708788 None:intergenic 40.0%
TATACATTGGCAGACAACCT+CGG - chr2_3:40708847-40708866 None:intergenic 40.0%
AGGTTGTCTGCCAATGTATA+CGG + chr2_3:40708847-40708866 Msa0291980:CDS 40.0%
!! AGATGGTGCTTCCCTTATTT+TGG + chr2_3:40708962-40708981 Msa0291980:CDS 40.0%
AGCAGCCTGCAACTATAATA+TGG + chr2_3:40709028-40709047 Msa0291980:CDS 40.0%
GCAGCCTGCAACTATAATAT+GGG + chr2_3:40709029-40709048 Msa0291980:CDS 40.0%
GATCCAATGTCATCCACATT+TGG - chr2_3:40709164-40709183 None:intergenic 40.0%
GGATTTAACAGTAATGCTGG+GGG + chr2_3:40709308-40709327 Msa0291980:CDS 40.0%
GATTTAACAGTAATGCTGGG+GGG + chr2_3:40709309-40709328 Msa0291980:CDS 40.0%
TTAGCACATGGGGTTGGATT+TGG - chr2_3:40700570-40700589 None:intergenic 45.0%
AGGAATTTAGCACATGGGGT+TGG - chr2_3:40700576-40700595 None:intergenic 45.0%
GAAAGGGGAAGATCTGTGAT+AGG - chr2_3:40700596-40700615 None:intergenic 45.0%
!!! GTGGATATGGATGGTTTTGG+AGG + chr2_3:40700763-40700782 Msa0291980:CDS 45.0%
!!! GATATGGATGGTTTTGGAGG+TGG + chr2_3:40700766-40700785 Msa0291980:CDS 45.0%
!!! TATGGATGGTTTTGGAGGTG+GGG + chr2_3:40700768-40700787 Msa0291980:CDS 45.0%
TTGGGTCATGTTCCTGTTTC+AGG + chr2_3:40700832-40700851 Msa0291980:CDS 45.0%
TTTGCATCTGTGTGTTGGAG+GGG + chr2_3:40701438-40701457 Msa0291980:intron 45.0%
TGGTGGGAATTATGGTCACA+TGG + chr2_3:40701799-40701818 Msa0291980:intron 45.0%
GGTGGGAATTATGGTCACAT+GGG + chr2_3:40701800-40701819 Msa0291980:intron 45.0%
CTTTGGTAAAGATGCTGTCC+AGG + chr2_3:40701960-40701979 Msa0291980:CDS 45.0%
!! CAACCACCTTTTGGAAGGTA+AGG + chr2_3:40702260-40702279 Msa0291980:intron 45.0%
CATCCTTACCTTCCAAAAGG+TGG - chr2_3:40702266-40702285 None:intergenic 45.0%
GAAATCATGGAAAACGGTGC+AGG - chr2_3:40702535-40702554 None:intergenic 45.0%
ACTGAAACAAGTCACGGGTT+TGG + chr2_3:40702601-40702620 Msa0291980:intron 45.0%
GTGCAACTGAAACAAGTCAC+GGG + chr2_3:40702667-40702686 Msa0291980:intron 45.0%
ACTGAAACAAGTCACGGGTT+TGG + chr2_3:40702601-40702620 Msa0291980:intron 45.0%
! CCCCTTGTTGTATGCTATCT+TGG + chr2_3:40702797-40702816 Msa0291980:intron 45.0%
TTTACTGCTTGCACTCAGCA+TGG - chr2_3:40703102-40703121 None:intergenic 45.0%
ATGCTGAGTGCAAGCAGTAA+AGG + chr2_3:40703101-40703120 Msa0291980:intron 45.0%
TGCTGAGTGCAAGCAGTAAA+GGG + chr2_3:40703102-40703121 Msa0291980:intron 45.0%
GTGCAAGCAGTAAAGGGATA+TGG + chr2_3:40703108-40703127 Msa0291980:intron 45.0%
TGGTCGCAACAGTGAAACTT+AGG + chr2_3:40703308-40703327 Msa0291980:intron 45.0%
GGTCGCAACAGTGAAACTTA+GGG + chr2_3:40703309-40703328 Msa0291980:intron 45.0%
AATGGAAGATCTGTGTGCAG+CGG - chr2_3:40703395-40703414 None:intergenic 45.0%
! TCCTGTGATTTTTGCAGCTG+CGG + chr2_3:40703419-40703438 Msa0291980:intron 45.0%
CACATGAGCGACCATATAAC+GGG - chr2_3:40704108-40704127 None:intergenic 45.0%
GCACATGAGCGACCATATAA+CGG - chr2_3:40704109-40704128 None:intergenic 45.0%
CGACAACTATATTTGGGTGG+TGG + chr2_3:40704501-40704520 Msa0291980:intron 45.0%
! AGGCTCAACGGAGTACTTAA+GGG - chr2_3:40704914-40704933 None:intergenic 45.0%
CTAAGTATCACCACGTTGAG+AGG - chr2_3:40704934-40704953 None:intergenic 45.0%
CTCTCAACGTGGTGATACTT+AGG + chr2_3:40704932-40704951 Msa0291980:intron 45.0%
CCTACTGGAGATGCTATAAG+AGG - chr2_3:40704970-40704989 None:intergenic 45.0%
CCTCTTATAGCATCTCCAGT+AGG + chr2_3:40704967-40704986 Msa0291980:intron 45.0%
GCTATCAAATTCCCCACATC+AGG - chr2_3:40705057-40705076 None:intergenic 45.0%
GATGGAAGCGAAATTGAGTG+TGG + chr2_3:40705314-40705333 Msa0291980:intron 45.0%
TGGAAGCGAAATTGAGTGTG+GGG + chr2_3:40705316-40705335 Msa0291980:intron 45.0%
GAAATTGAGTGTGGGGTGAT+TGG + chr2_3:40705323-40705342 Msa0291980:intron 45.0%
CAGGAAAGGCAAAAGGGAAA+AGG - chr2_3:40705605-40705624 None:intergenic 45.0%
! CTTTTCCCTTTTGCCTTTCC+TGG + chr2_3:40705603-40705622 Msa0291980:intron 45.0%
TAGTTGAACAAGGCTGTCAG+TGG + chr2_3:40706038-40706057 Msa0291980:intron 45.0%
CCAATAACACCTGGGTTTCT+TGG - chr2_3:40706065-40706084 None:intergenic 45.0%
! CCAAGAAACCCAGGTGTTAT+TGG + chr2_3:40706062-40706081 Msa0291980:CDS 45.0%
CACGTTCACCAATAACACCT+GGG - chr2_3:40706073-40706092 None:intergenic 45.0%
! GCATTGATATGGGATCCAAG+TGG + chr2_3:40706419-40706438 Msa0291980:intron 45.0%
TAAACATGTGGGCATCCACT+TGG - chr2_3:40706437-40706456 None:intergenic 45.0%
CTGTTAACTTCTGCTGCTAG+AGG - chr2_3:40706480-40706499 None:intergenic 45.0%
CTAGCAGCAGAAGTTAACAG+AGG + chr2_3:40706480-40706499 Msa0291980:intron 45.0%
ATCGATGCTCGCAATTTCGA+GGG + chr2_3:40706560-40706579 Msa0291980:intron 45.0%
!!! TGAGGAGAGGCACTAGTTTT+AGG + chr2_3:40706833-40706852 Msa0291980:intron 45.0%
!!! GAGGAGAGGCACTAGTTTTA+GGG + chr2_3:40706834-40706853 Msa0291980:intron 45.0%
AATGTCTACAGTGAAAGGGG+GGG - chr2_3:40707009-40707028 None:intergenic 45.0%
GAATGTCTACAGTGAAAGGG+GGG - chr2_3:40707010-40707029 None:intergenic 45.0%
GCCAGATCAGATGTAGAATC+TGG - chr2_3:40707085-40707104 None:intergenic 45.0%
AAATGGGCAAGAGAAGACTG+GGG - chr2_3:40707193-40707212 None:intergenic 45.0%
GTAAATGGGCAAGAGAAGAC+TGG - chr2_3:40707195-40707214 None:intergenic 45.0%
CTTCATATCCTGAGCAGCTA+AGG + chr2_3:40707242-40707261 Msa0291980:CDS 45.0%
TGATCAAGCCAGTTGTGAAC+TGG - chr2_3:40707307-40707326 None:intergenic 45.0%
CAGCTCATGATGACAAACGA+TGG + chr2_3:40707347-40707366 Msa0291980:CDS 45.0%
! AAGTGTGGAATGGAGGTATG+CGG - chr2_3:40707382-40707401 None:intergenic 45.0%
TGATTCGTGCAAGTGTGGAA+TGG - chr2_3:40707392-40707411 None:intergenic 45.0%
! GTAAGCTCCTGTTGTTTGTC+GGG - chr2_3:40707442-40707461 None:intergenic 45.0%
TTTCACTTCTTATCCTCCGC+CGG + chr2_3:40707501-40707520 Msa0291980:CDS 45.0%
GGTTCTCCAAGTCATAGTAC+AGG + chr2_3:40707541-40707560 Msa0291980:CDS 45.0%
AAGTGGCCTGTACTATGACT+TGG - chr2_3:40707550-40707569 None:intergenic 45.0%
AGCGCAGAATTGGAGAAATG+TGG - chr2_3:40707631-40707650 None:intergenic 45.0%
ACTCAACTGTAGCGCAGAAT+TGG - chr2_3:40707641-40707660 None:intergenic 45.0%
AATTCTGCGCTACAGTTGAG+TGG + chr2_3:40707640-40707659 Msa0291980:CDS 45.0%
! TATTCGTTGACTAAGAGGGG+AGG - chr2_3:40707719-40707738 None:intergenic 45.0%
AACCAATTGGTCAACCAAGC+AGG + chr2_3:40707742-40707761 Msa0291980:CDS 45.0%
ACCAATTGGTCAACCAAGCA+GGG + chr2_3:40707743-40707762 Msa0291980:CDS 45.0%
AACCAAGCAGGGTTATATCC+AGG + chr2_3:40707754-40707773 Msa0291980:CDS 45.0%
CAGGGTTATATCCAGGAGAT+CGG + chr2_3:40707761-40707780 Msa0291980:CDS 45.0%
GCTGCAGCATATTACTAAGG+AGG - chr2_3:40707792-40707811 None:intergenic 45.0%
! TTGCTATTGACGGATGAGCT+AGG - chr2_3:40707961-40707980 None:intergenic 45.0%
!! GCTTTCACTCTTTTGGCTAC+TGG - chr2_3:40708055-40708074 None:intergenic 45.0%
! TTTTTGCAAGACGACCTTGG+TGG - chr2_3:40708188-40708207 None:intergenic 45.0%
TTACTGGAACGTGTTCGTGA+AGG - chr2_3:40708267-40708286 None:intergenic 45.0%
GAGAATCAGCCTCAAGAAGA+GGG - chr2_3:40708359-40708378 None:intergenic 45.0%
TCTCCAAATTCTTCCATCCC+TGG + chr2_3:40708375-40708394 Msa0291980:CDS 45.0%
CTACCAGGGATGGAAGAATT+TGG - chr2_3:40708381-40708400 None:intergenic 45.0%
TAAATCAGAGCTACCAGGGA+TGG - chr2_3:40708391-40708410 None:intergenic 45.0%
!! TTCAGAGAAGCCTCTAGAAC+AGG + chr2_3:40708416-40708435 Msa0291980:CDS 45.0%
AATGTAGGCTCCTGTTCTAG+AGG - chr2_3:40708429-40708448 None:intergenic 45.0%
CTTGTGGCTGATTAGACTGT+AGG - chr2_3:40708518-40708537 None:intergenic 45.0%
CAGTCTAATCAGCCACAAGA+TGG + chr2_3:40708519-40708538 Msa0291980:CDS 45.0%
TCTAATCAGCCACAAGATGG+TGG + chr2_3:40708522-40708541 Msa0291980:CDS 45.0%
GGAAAAATGGGCACAAGGTT+GGG + chr2_3:40708619-40708638 Msa0291980:CDS 45.0%
! TTCCTGGTAGTGACCTTATG+CGG + chr2_3:40708730-40708749 Msa0291980:CDS 45.0%
! TAGTTTGCATGACCGTCCTT+CGG + chr2_3:40708754-40708773 Msa0291980:CDS 45.0%
GGTTGTCTGCCAATGTATAC+GGG + chr2_3:40708848-40708867 Msa0291980:CDS 45.0%
GTTGTCTGCCAATGTATACG+GGG + chr2_3:40708849-40708868 Msa0291980:CDS 45.0%
GATCCATTCCCCGTATACAT+TGG - chr2_3:40708860-40708879 None:intergenic 45.0%
TGTATACGGGGAATGGATCT+TGG + chr2_3:40708861-40708880 Msa0291980:CDS 45.0%
ACAAACAACTGCAGCAAGAC+AGG - chr2_3:40708898-40708917 None:intergenic 45.0%
TTGTGGATCGGTTAGAAGCT+CGG - chr2_3:40709009-40709028 None:intergenic 45.0%
TTATAGTTGCAGGCTGCTTG+TGG - chr2_3:40709026-40709045 None:intergenic 45.0%
ATCAAATGAGGCCTGCCAAA+AGG - chr2_3:40709063-40709082 None:intergenic 45.0%
GCACCAAATGTGGATGACAT+TGG + chr2_3:40709158-40709177 Msa0291980:CDS 45.0%
CCAGCAATAACTTCCTTTGG+TGG - chr2_3:40709259-40709278 None:intergenic 45.0%
CCACCAAAGGAAGTTATTGC+TGG + chr2_3:40709256-40709275 Msa0291980:CDS 45.0%
TGGGGTTGGATTTGGATCAG+AGG - chr2_3:40700562-40700581 None:intergenic 50.0%
!!! ATGGATGGTTTTGGAGGTGG+GGG + chr2_3:40700769-40700788 Msa0291980:CDS 50.0%
CTAAGATCTCCAGAACCAGG+AGG - chr2_3:40700808-40700827 None:intergenic 50.0%
!! CTCCTGGTTCTGGAGATCTT+AGG + chr2_3:40700806-40700825 Msa0291980:CDS 50.0%
TGCCTAAGATCTCCAGAACC+AGG - chr2_3:40700811-40700830 None:intergenic 50.0%
TCATCTGGGCCATGTAGATC+TGG + chr2_3:40700918-40700937 Msa0291980:intron 50.0%
ATCTGTGTGTTGGAGGGGTA+GGG + chr2_3:40701443-40701462 Msa0291980:intron 50.0%
!! CACTGTCTGGATTAGCCTTG+TGG - chr2_3:40701536-40701555 None:intergenic 50.0%
GGCTAATCCAGACAGTGCTT+AGG + chr2_3:40701539-40701558 Msa0291980:intron 50.0%
CACTCTCACTTTGCAGGATG+AGG + chr2_3:40702204-40702223 Msa0291980:intron 50.0%
GTTAATAGTGGCGTTGCACG+TGG + chr2_3:40703255-40703274 Msa0291980:intron 50.0%
! CATTGGACATTAAGGGGTGC+CGG + chr2_3:40703332-40703351 Msa0291980:intron 50.0%
CGATTCACACCAACGTGTTC+TGG - chr2_3:40703368-40703387 None:intergenic 50.0%
ATGGAAGATCTGTGTGCAGC+GGG - chr2_3:40703394-40703413 None:intergenic 50.0%
ACACGGGCCTTTGAATACCT+TGG + chr2_3:40703570-40703589 Msa0291980:intron 50.0%
CACGGGCCTTTGAATACCTT+GGG + chr2_3:40703571-40703590 Msa0291980:intron 50.0%
! GACACAAGGCTTGGTTGTTG+TGG - chr2_3:40703945-40703964 None:intergenic 50.0%
ACACTTAGCGACACAAGGCT+TGG - chr2_3:40703954-40703973 None:intergenic 50.0%
! AAGCCTTGTGTCGCTAAGTG+TGG + chr2_3:40703953-40703972 Msa0291980:intron 50.0%
! CTTGTGTCGCTAAGTGTGGT+CGG + chr2_3:40703957-40703976 Msa0291980:intron 50.0%
ATCTGCCAACAAGGCAAGAG+AGG - chr2_3:40704210-40704229 None:intergenic 50.0%
TGGGATAACATGCAGAGCAG+TGG - chr2_3:40704447-40704466 None:intergenic 50.0%
! AATATTGGTTGGGTCAGGCC+AGG - chr2_3:40704655-40704674 None:intergenic 50.0%
!! GCTTAAGCTTTAGGGGCAGT+TGG - chr2_3:40704707-40704726 None:intergenic 50.0%
!! AAGATGTCGGCTTTGAAGGG+TGG - chr2_3:40704826-40704845 None:intergenic 50.0%
ACCCTTCAAAGCCGACATCT+TGG + chr2_3:40704825-40704844 Msa0291980:intron 50.0%
!! GCCAAGATGTCGGCTTTGAA+GGG - chr2_3:40704829-40704848 None:intergenic 50.0%
!! TGCCAAGATGTCGGCTTTGA+AGG - chr2_3:40704830-40704849 None:intergenic 50.0%
CCAGCCTCTCCAAGTACTTT+GGG + chr2_3:40704886-40704905 Msa0291980:intron 50.0%
! GGTACCCAAAGTACTTGGAG+AGG - chr2_3:40704893-40704912 None:intergenic 50.0%
! GAGGCTCAACGGAGTACTTA+AGG - chr2_3:40704915-40704934 None:intergenic 50.0%
CACATCAGGTTCCTCCAATG+GGG - chr2_3:40705043-40705062 None:intergenic 50.0%
CCACATCAGGTTCCTCCAAT+GGG - chr2_3:40705044-40705063 None:intergenic 50.0%
CCATTGGAGGAACCTGATGT+GGG + chr2_3:40705042-40705061 Msa0291980:intron 50.0%
CATTGGAGGAACCTGATGTG+GGG + chr2_3:40705043-40705062 Msa0291980:intron 50.0%
! GCCCCCCTTCTTTTTATGGT+TGG - chr2_3:40705159-40705178 None:intergenic 50.0%
! CTTCGCCCCCCTTCTTTTTA+TGG - chr2_3:40705163-40705182 None:intergenic 50.0%
AGTGTGGGGTGATTGGTATG+TGG + chr2_3:40705330-40705349 Msa0291980:intron 50.0%
CCACGTTCACCAATAACACC+TGG - chr2_3:40706074-40706093 None:intergenic 50.0%
!! CCAGGTGTTATTGGTGAACG+TGG + chr2_3:40706071-40706090 Msa0291980:CDS 50.0%
TGCTGCTAGAGGCTATAACG+TGG - chr2_3:40706469-40706488 None:intergenic 50.0%
GATCGATGCTCGCAATTTCG+AGG + chr2_3:40706559-40706578 Msa0291980:intron 50.0%
CACTAGAGCAATGTTGGAGG+TGG - chr2_3:40707282-40707301 None:intergenic 50.0%
GCTCACTAGAGCAATGTTGG+AGG - chr2_3:40707285-40707304 None:intergenic 50.0%
CTGGCTCACTAGAGCAATGT+TGG - chr2_3:40707288-40707307 None:intergenic 50.0%
CTAGTGAGCCAGTTCACAAC+TGG + chr2_3:40707296-40707315 Msa0291980:CDS 50.0%
TTCGTGCAAGTGTGGAATGG+AGG - chr2_3:40707389-40707408 None:intergenic 50.0%
!! GGTGTTGATTCGTGCAAGTG+TGG - chr2_3:40707397-40707416 None:intergenic 50.0%
TTCACTTCTTATCCTCCGCC+GGG + chr2_3:40707502-40707521 Msa0291980:CDS 50.0%
AACCTTGGGTCACACTTTGG+TGG + chr2_3:40707667-40707686 Msa0291980:CDS 50.0%
TTCCACCAAAGTGTGACCCA+AGG - chr2_3:40707672-40707691 None:intergenic 50.0%
ACCCTGCTTGGTTGACCAAT+TGG - chr2_3:40707747-40707766 None:intergenic 50.0%
CTCCTGGATATAACCCTGCT+TGG - chr2_3:40707759-40707778 None:intergenic 50.0%
CATCCTGTTCAGCAATCTGC+AGG + chr2_3:40707889-40707908 Msa0291980:CDS 50.0%
TAGCCTGCAGATTGCTGAAC+AGG - chr2_3:40707895-40707914 None:intergenic 50.0%
CAATCTGCAGGCTACTTGTC+AGG + chr2_3:40707901-40707920 Msa0291980:CDS 50.0%
GATGAGCTAGGAGAAAGGTG+GGG - chr2_3:40707949-40707968 None:intergenic 50.0%
GGATGAGCTAGGAGAAAGGT+GGG - chr2_3:40707950-40707969 None:intergenic 50.0%
! TGACGGATGAGCTAGGAGAA+AGG - chr2_3:40707954-40707973 None:intergenic 50.0%
!! TTCAGGTTGATTCCCTAGGG+AGG + chr2_3:40708304-40708323 Msa0291980:CDS 50.0%
!! TCAGGTTGATTCCCTAGGGA+GGG + chr2_3:40708305-40708324 Msa0291980:CDS 50.0%
GGAGAATCAGCCTCAAGAAG+AGG - chr2_3:40708360-40708379 None:intergenic 50.0%
GTGACTCTGGCAGCAAATGT+AGG - chr2_3:40708444-40708463 None:intergenic 50.0%
TGCTGCCAGAGTCACAATTG+AGG + chr2_3:40708449-40708468 Msa0291980:CDS 50.0%
GCCAGAGTCACAATTGAGGA+CGG + chr2_3:40708453-40708472 Msa0291980:CDS 50.0%
ACCGTCCTCAATTGTGACTC+TGG - chr2_3:40708457-40708476 None:intergenic 50.0%
ACGAAGAAGGCAGGTCCTAT+TGG + chr2_3:40708557-40708576 Msa0291980:CDS 50.0%
AGAAGGCAGGTCCTATTGGA+AGG + chr2_3:40708561-40708580 Msa0291980:CDS 50.0%
TTGACCCGCTGGGGAAAAAT+GGG + chr2_3:40708607-40708626 Msa0291980:CDS 50.0%
!! TTGTGCCCATTTTTCCCCAG+CGG - chr2_3:40708615-40708634 None:intergenic 50.0%
GGGAAAAATGGGCACAAGGT+TGG + chr2_3:40708618-40708637 Msa0291980:CDS 50.0%
ATCCGCATAAGGTCACTACC+AGG - chr2_3:40708735-40708754 None:intergenic 50.0%
! CTTATTTGGTGGTCTCCCCT+CGG + chr2_3:40708788-40708807 Msa0291980:CDS 50.0%
CTGCCAATGTATACGGGGAA+TGG + chr2_3:40708854-40708873 Msa0291980:CDS 50.0%
! GGGTAATCGTTCCTTTTGGC+AGG + chr2_3:40709049-40709068 Msa0291980:CDS 50.0%
CTTGCACGCAAGAGTTCAAC+AGG - chr2_3:40709218-40709237 None:intergenic 50.0%
! TTTGGTGGTCATCAGTGTGG+GGG - chr2_3:40709244-40709263 None:intergenic 50.0%
! CTTTGGTGGTCATCAGTGTG+GGG - chr2_3:40709245-40709264 None:intergenic 50.0%
! CCTTTGGTGGTCATCAGTGT+GGG - chr2_3:40709246-40709265 None:intergenic 50.0%
! TCCTTTGGTGGTCATCAGTG+TGG - chr2_3:40709247-40709266 None:intergenic 50.0%
TTTGGAGGTGGGGGTGATCT+TGG + chr2_3:40700778-40700797 Msa0291980:CDS 55.0%
CATCTGTGTGTTGGAGGGGT+AGG + chr2_3:40701442-40701461 Msa0291980:intron 55.0%
TCTGTGTGTTGGAGGGGTAG+GGG + chr2_3:40701444-40701463 Msa0291980:intron 55.0%
GAGGGTTGAAGAACATCGCG+TGG + chr2_3:40701466-40701485 Msa0291980:intron 55.0%
TGCTGTCCAGGAAGTCGAGT+TGG + chr2_3:40701972-40701991 Msa0291980:CDS 55.0%
GCTGTCCAGGAAGTCGAGTT+GGG + chr2_3:40701973-40701992 Msa0291980:CDS 55.0%
!! TCCAGGAAGTCGAGTTGGGA+GGG + chr2_3:40701977-40701996 Msa0291980:CDS 55.0%
! CGAGTTGGGAGGGTTAGAAG+AGG + chr2_3:40701987-40702006 Msa0291980:CDS 55.0%
AACAACTACTCGCGCTGCAC+CGG - chr2_3:40703289-40703308 None:intergenic 55.0%
ACCAACGTGTTCTGGCACTG+TGG - chr2_3:40703360-40703379 None:intergenic 55.0%
GCCGCAGCTGCAAAAATCAC+AGG - chr2_3:40703423-40703442 None:intergenic 55.0%
!! GCAGCCCGGAGTTTGTTACA+GGG + chr2_3:40703441-40703460 Msa0291980:intron 55.0%
CGACCACACTTAGCGACACA+AGG - chr2_3:40703959-40703978 None:intergenic 55.0%
! TAGCGGTCGACTCCGAAACT+GGG - chr2_3:40704466-40704485 None:intergenic 55.0%
! ATAGCGGTCGACTCCGAAAC+TGG - chr2_3:40704467-40704486 None:intergenic 55.0%
TCGACCGCTATGCGTGATCT+GGG + chr2_3:40704476-40704495 Msa0291980:intron 55.0%
CGATCCCAGATCACGCATAG+CGG - chr2_3:40704483-40704502 None:intergenic 55.0%
! TTTGGGTGGTGGTTTGGCCT+CGG + chr2_3:40704512-40704531 Msa0291980:intron 55.0%
GAGTGCAGCTGCCAAGATGT+CGG - chr2_3:40704839-40704858 None:intergenic 55.0%
GCCAGCCTCTCCAAGTACTT+TGG + chr2_3:40704885-40704904 Msa0291980:intron 55.0%
! CCCAAAGTACTTGGAGAGGC+TGG - chr2_3:40704889-40704908 None:intergenic 55.0%
CACCACGTTGAGAGGCTCAA+CGG - chr2_3:40704926-40704945 None:intergenic 55.0%
CCCATTGGAGGAACCTGATG+TGG + chr2_3:40705041-40705060 Msa0291980:intron 55.0%
CCCACATCAGGTTCCTCCAA+TGG - chr2_3:40705045-40705064 None:intergenic 55.0%
GTGGGGTGATTGGTATGTGG+AGG + chr2_3:40705333-40705352 Msa0291980:intron 55.0%
GTCAGTGGACCAAGAAACCC+AGG + chr2_3:40706053-40706072 Msa0291980:CDS 55.0%
TGCTCTTGCCTTAGCTGCTC+AGG - chr2_3:40707253-40707272 None:intergenic 55.0%
GCTGCTGCTCCAGTGTGATA+TGG - chr2_3:40707580-40707599 None:intergenic 55.0%
CTAAGAGGGGAGGAACCAGT+AGG - chr2_3:40707709-40707728 None:intergenic 55.0%
CGGATGAGCTAGGAGAAAGG+TGG - chr2_3:40707951-40707970 None:intergenic 55.0%
ACTTCAACTGGTTGACCCGC+TGG + chr2_3:40708596-40708615 Msa0291980:CDS 55.0%
CTTCAACTGGTTGACCCGCT+GGG + chr2_3:40708597-40708616 Msa0291980:CDS 55.0%
TTCAACTGGTTGACCCGCTG+GGG + chr2_3:40708598-40708617 Msa0291980:CDS 55.0%
GTTGACCCGCTGGGGAAAAA+TGG + chr2_3:40708606-40708625 Msa0291980:CDS 55.0%
!! TGTGCCCATTTTTCCCCAGC+GGG - chr2_3:40708614-40708633 None:intergenic 55.0%
GCTGGGGAAAAATGGGCACA+AGG + chr2_3:40708614-40708633 Msa0291980:CDS 55.0%
CAAGGTTGGGCTTGCAGCTA+AGG + chr2_3:40708632-40708651 Msa0291980:CDS 55.0%
CAAGGAGCTTGCGTCCCTTA+GGG - chr2_3:40708689-40708708 None:intergenic 55.0%
CATGTAGTCACTGCAGCTGC+TGG - chr2_3:40708816-40708835 None:intergenic 55.0%
GACTACATGCAACCTTGCCG+AGG + chr2_3:40708827-40708846 Msa0291980:CDS 55.0%
ATTGGCAGACAACCTCGGCA+AGG - chr2_3:40708842-40708861 None:intergenic 55.0%
CTCCAGCAGTGCTTCCAACA+GGG - chr2_3:40708944-40708963 None:intergenic 55.0%
TCTCCAGCAGTGCTTCCAAC+AGG - chr2_3:40708945-40708964 None:intergenic 55.0%
!! GTTGGAAGCACTGCTGGAGA+TGG + chr2_3:40708945-40708964 Msa0291980:CDS 55.0%
GTTGCAGGCTGCTTGTGGAT+CGG - chr2_3:40709021-40709040 None:intergenic 55.0%
CCCACACTGATGACCACCAA+AGG + chr2_3:40709243-40709262 Msa0291980:CDS 55.0%
CAGCGTTCTGTTCCCGTGAT+TGG + chr2_3:40709287-40709306 Msa0291980:CDS 55.0%
AACAGTAATGCTGGGGGGAG+TGG + chr2_3:40709314-40709333 Msa0291980:CDS 55.0%
! GGTGATCTTGGTGGACCTCC+TGG + chr2_3:40700790-40700809 Msa0291980:CDS 60.0%
! CTTGGTGGACCTCCTGGTTC+TGG + chr2_3:40700796-40700815 Msa0291980:CDS 60.0%
TGTGTTGGAGGGGTAGGGGA+GGG + chr2_3:40701448-40701467 Msa0291980:intron 60.0%
!! GTCCAGGAAGTCGAGTTGGG+AGG + chr2_3:40701976-40701995 Msa0291980:CDS 60.0%
ACCCTCCCAACTCGACTTCC+TGG - chr2_3:40701981-40702000 None:intergenic 60.0%
GTTGCACGTGGTAATCGCGC+CGG + chr2_3:40703267-40703286 Msa0291980:intron 60.0%
GGTGCAGCGCGAGTAGTTGT+TGG + chr2_3:40703288-40703307 Msa0291980:intron 60.0%
GCCACAGTGCCAGAACACGT+TGG + chr2_3:40703356-40703375 Msa0291980:intron 60.0%
! TTTTTGCAGCTGCGGCAGCC+CGG + chr2_3:40703427-40703446 Msa0291980:intron 60.0%
!! GGCAGCCCGGAGTTTGTTAC+AGG + chr2_3:40703440-40703459 Msa0291980:intron 60.0%
GTCGACCGCTATGCGTGATC+TGG + chr2_3:40704475-40704494 Msa0291980:intron 60.0%
! TTGGGTGGTGGTTTGGCCTC+GGG + chr2_3:40704513-40704532 Msa0291980:intron 60.0%
CTCCGTTGAGCCTCTCAACG+TGG + chr2_3:40704921-40704940 Msa0291980:intron 60.0%
ACTTCTTATCCTCCGCCGGG+TGG + chr2_3:40707505-40707524 Msa0291980:CDS 60.0%
TGTTGAGATCGACCACCCGG+CGG - chr2_3:40707520-40707539 None:intergenic 60.0%
CCCTGTTGAGATCGACCACC+CGG - chr2_3:40707523-40707542 None:intergenic 60.0%
CCGGGTGGTCGATCTCAACA+GGG + chr2_3:40707520-40707539 Msa0291980:CDS 60.0%
CACTGGAGCAGCAGCTCAGT+TGG + chr2_3:40707585-40707604 Msa0291980:CDS 60.0%
AGGAGGTTGGACCGATCTCC+TGG - chr2_3:40707775-40707794 None:intergenic 60.0%
TCAGCCTCAAGAAGAGGGCG+AGG - chr2_3:40708354-40708373 None:intergenic 60.0%
GCAAGGAGCTTGCGTCCCTT+AGG - chr2_3:40708690-40708709 None:intergenic 60.0%
ACTGCAGCTGCTGGATCCGA+GGG - chr2_3:40708807-40708826 None:intergenic 60.0%
CATCCTCCTCTACGCCCTGT+TGG + chr2_3:40708927-40708946 Msa0291980:CDS 60.0%
CTTCCAACAGGGCGTAGAGG+AGG - chr2_3:40708933-40708952 None:intergenic 60.0%
GTGCTTCCAACAGGGCGTAG+AGG - chr2_3:40708936-40708955 None:intergenic 60.0%
GGAGGGACTGCATGATGCTG+TGG - chr2_3:40709127-40709146 None:intergenic 60.0%
AGTAATGCTGGGGGGAGTGG+AGG + chr2_3:40709317-40709336 Msa0291980:CDS 60.0%
GGAGGTGGGGGTGATCTTGG+TGG + chr2_3:40700781-40700800 Msa0291980:CDS 65.0%
GTGTGTTGGAGGGGTAGGGG+AGG + chr2_3:40701447-40701466 Msa0291980:intron 65.0%
GTGTTCTGGCACTGTGGCGC+CGG - chr2_3:40703354-40703373 None:intergenic 65.0%
! TGGGTGGTGGTTTGGCCTCG+GGG + chr2_3:40704514-40704533 Msa0291980:intron 65.0%
GCCGGGTGGTCGATCTCAAC+AGG + chr2_3:40707519-40707538 Msa0291980:CDS 65.0%
TCGGCCTCGCCCTCTTCTTG+AGG + chr2_3:40708347-40708366 Msa0291980:CDS 65.0%
CTGCAGCTGCTGGATCCGAG+GGG - chr2_3:40708806-40708825 None:intergenic 65.0%
CACTGCAGCTGCTGGATCCG+AGG - chr2_3:40708808-40708827 None:intergenic 65.0%
!! CGCCCTGTTGGAAGCACTGC+TGG + chr2_3:40708939-40708958 Msa0291980:CDS 65.0%
GGTGGTCATCAGTGTGGGGG+AGG - chr2_3:40709241-40709260 None:intergenic 65.0%
TGAGATCGACCACCCGGCGG+AGG - chr2_3:40707517-40707536 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 40700500 40709370 40700500 ID=Msa0291980;Name=Msa0291980
chr2_3 mRNA 40700500 40709370 40700500 ID=Msa0291980-mRNA-1;Parent=Msa0291980;Name=Msa0291980-mRNA-1;_AED=0.01;_eAED=0.01;_QI=260|1|0.8|1|1|1|5|0|880
chr2_3 exon 40700500 40700853 40700500 ID=Msa0291980-mRNA-1:exon:13107;Parent=Msa0291980-mRNA-1
chr2_3 exon 40701926 40702068 40701926 ID=Msa0291980-mRNA-1:exon:13108;Parent=Msa0291980-mRNA-1
chr2_3 exon 40702220 40702276 40702220 ID=Msa0291980-mRNA-1:exon:13109;Parent=Msa0291980-mRNA-1
chr2_3 exon 40706041 40706104 40706041 ID=Msa0291980-mRNA-1:exon:13110;Parent=Msa0291980-mRNA-1
chr2_3 exon 40707086 40709370 40707086 ID=Msa0291980-mRNA-1:exon:13111;Parent=Msa0291980-mRNA-1
chr2_3 five_prime_UTR 40700500 40700759 40700500 ID=Msa0291980-mRNA-1:five_prime_utr;Parent=Msa0291980-mRNA-1
chr2_3 CDS 40700760 40700853 40700760 ID=Msa0291980-mRNA-1:cds;Parent=Msa0291980-mRNA-1
chr2_3 CDS 40701926 40702068 40701926 ID=Msa0291980-mRNA-1:cds;Parent=Msa0291980-mRNA-1
chr2_3 CDS 40702220 40702276 40702220 ID=Msa0291980-mRNA-1:cds;Parent=Msa0291980-mRNA-1
chr2_3 CDS 40706041 40706104 40706041 ID=Msa0291980-mRNA-1:cds;Parent=Msa0291980-mRNA-1
chr2_3 CDS 40707086 40709370 40707086 ID=Msa0291980-mRNA-1:cds;Parent=Msa0291980-mRNA-1
Gene Sequence

>Msa0291980

ATGGTGGATATGGATGGTTTTGGAGGTGGGGGTGATCTTGGTGGACCTCCTGGTTCTGGAGATCTTAGGCAATTGGGTCATGTTCCTGTTTCAGGAGGTGCTGTTTTTGATGCATCACAATATGCATTCTTTGGTAAAGATGCTGTCCAGGAAGTCGAGTTGGGAGGGTTAGAAGAGGACGCCCATTTGCCAACTTTTGAGTCTAATGAGGAGGAGTTCTTTTTTAATAGAGAACAGGATGAGGATGTGAGATCTCTTTCTGATATTGACGATCTTACAACCACCTTTTGGAAGTTGAACAAGGCTGTCAGTGGACCAAGAAACCCAGGTGTTATTGGTGAACGTGGATCCAGAGAAAATTCTACATCTGATCTGGCACAAAGAGACGATGTTCATAACTGGTTTGATCAGAATGCGTATGATAGTGAAGGTTCAATTGATGGAAAAAGATGGTCATCACAGCCCCAGTCTTCTCTTGCCCATTTACAAAATTCAAAGTCCTTGTACAGAACATCTTCATATCCTGAGCAGCTAAGGCAAGAGCAAAACTACCACCTCCAACATTGCTCTAGTGAGCCAGTTCACAACTGGCTTGATCAACATATTTATGATATTGAAACAGCTCATGATGACAAACGATGGTCATCTCAGCCGCATACCTCCATTCCACACTTGCACGAATCAACACCCTTGTACAGAACATCTTCATATCCCGACAAACAACAGGAGCTTACTCGTTTTTCTAGTGAGCCAATATTGGTACAGAAGTCTTCTTTCACTTCTTATCCTCCGCCGGGTGGTCGATCTCAACAGGGTTCTCCAAGTCATAGTACAGGCCACTTGAACATTCCATATCACACTGGAGCAGCAGCTCAGTTGGCACTATCATCTCAAAATCGACCACATTTCTCCAATTCTGCGCTACAGTTGAGTGGATTAAACCTTGGGTCACACTTTGGTGGAAACACACGACAATATCCTACTGGTTCCTCCCCTCTTAGTCAACGAATACAGAACCAATTGGTCAACCAAGCAGGGTTATATCCAGGAGATCGGTCCAACCTCCTTAGTAATATGCTGCAGCAACAACTACAGCTTCATAATGGATCAGTTTCTCCTCACTTGATGACTCAATTGCAACAGCAGCAGCATAGACTGCATCATCCTGTTCAGCAATCTGCAGGCTACTTGTCAGGTTTCCAGTCCCATTTATTTAATCCCCACCTTTCTCCTAGCTCATCCGTCAATAGCAAGTATGATCACAGACATAAATCAACTCAAAAAGGTAAACATAGTCATCGTTTATCACATCAGGGTTCTGATGCCAGTAGCCAAAAGAGTGAAAGCAGTTCATTACAATTTCGGTCCAAGCATATGACAAGTGATGAAATTGAGAGTATTCTTAGAATGCAGCTTGCTGTCACTCATAGTAATGATCCATACATAGATGACTATTACCACCAAGGTCGTCTTGCAAAAAAACCTTCTGTGGCCAAGTTAAAACATCCTTTCTGCCCAACCCAAATAAAGGAACTTCCTTCACGAACACGTTCCAGTAATGATCCTCATGCATTTCTTCAGGTTGATTCCCTAGGGAGGGTTTCATTTTCATCTATTCGTCGGCCTCGCCCTCTTCTTGAGGCTGATTCTCCAAATTCTTCCATCCCTGGTAGCTCTGATTTAAAGATTTCAGAGAAGCCTCTAGAACAGGAGCCTACATTTGCTGCCAGAGTCACAATTGAGGACGGTCTTTGTCTTCTTCTTGATGTAGATGATATTGATCGTTTCCTACAGTCTAATCAGCCACAAGATGGTGGAACACAATTAAGACGAAGAAGGCAGGTCCTATTGGAAGGACTAGCTACTTCACTTCAACTGGTTGACCCGCTGGGGAAAAATGGGCACAAGGTTGGGCTTGCAGCTAAGGATGACCTTGTTTTCATAAGGATAGTATCTGTCCCTAAGGGACGCAAGCTCCTTGCGAAGTATCTTCAATTGCTTCTTCCTGGTAGTGACCTTATGCGGATAGTTTGCATGACCGTCCTTCGGCATTTAAGATTCTTATTTGGTGGTCTCCCCTCGGATCCAGCAGCTGCAGTGACTACATGCAACCTTGCCGAGGTTGTCTGCCAATGTATACGGGGAATGGATCTTGGTGCTCTTAGTGCCTGTCTTGCTGCAGTTGTTTGTTCTGCAGAGCATCCTCCTCTACGCCCTGTTGGAAGCACTGCTGGAGATGGTGCTTCCCTTATTTTGGTATCTGTTCTTGAGAGGGCTACCGAGCTTCTAACCGATCCACAAGCAGCCTGCAACTATAATATGGGTAATCGTTCCTTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTATTACTAAGTATTGCATGAATAAATACCACAGCATCATGCAGTCCCTCCTTATACAAAATGCACCAAATGTGGATGACATTGGATCAGATGCTGCTAAAGCAATTAGTAAGGAAATGCCTGTTGAACTCTTGCGTGCAAGCCTCCCCCACACTGATGACCACCAAAGGAAGTTATTGCTGGATTTCGCTCAGCGTTCTGTTCCCGTGATTGGATTTAACAGTAATGCTGGGGGGAGTGGAGGTCTTGTGAATTCAGAGACAGTGCTAAGTTGA
Protein sequence

>Msa0291980

MVDMDGFGGGGDLGGPPGSGDLRQLGHVPVSGGAVFDASQYAFFGKDAVQEVELGGLEEDAHLPTFESNEEEFFFNREQDEDVRSLSDIDDLTTTFWKLNKAVSGPRNPGVIGERGSRENSTSDLAQRDDVHNWFDQNAYDSEGSIDGKRWSSQPQSSLAHLQNSKSLYRTSSYPEQLRQEQNYHLQHCSSEPVHNWLDQHIYDIETAHDDKRWSSQPHTSIPHLHESTPLYRTSSYPDKQQELTRFSSEPILVQKSSFTSYPPPGGRSQQGSPSHSTGHLNIPYHTGAAAQLALSSQNRPHFSNSALQLSGLNLGSHFGGNTRQYPTGSSPLSQRIQNQLVNQAGLYPGDRSNLLSNMLQQQLQLHNGSVSPHLMTQLQQQQHRLHHPVQQSAGYLSGFQSHLFNPHLSPSSSVNSKYDHRHKSTQKGKHSHRLSHQGSDASSQKSESSSLQFRSKHMTSDEIESILRMQLAVTHSNDPYIDDYYHQGRLAKKPSVAKLKHPFCPTQIKELPSRTRSSNDPHAFLQVDSLGRVSFSSIRRPRPLLEADSPNSSIPGSSDLKISEKPLEQEPTFAARVTIEDGLCLLLDVDDIDRFLQSNQPQDGGTQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFIRIVSVPKGRKLLAKYLQLLLPGSDLMRIVCMTVLRHLRFLFGGLPSDPAAAVTTCNLAEVVCQCIRGMDLGALSACLAAVVCSAEHPPLRPVGSTAGDGASLILVSVLERATELLTDPQAACNYNMGNRSFWQASFDEFFGLITKYCMNKYHSIMQSLLIQNAPNVDDIGSDAAKAISKEMPVELLRASLPHTDDHQRKLLLDFAQRSVPVIGFNSNAGGSGGLVNSETVLS*