Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333860 | XP_003596481.1 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333860 | sp|Q8RWG3|RER6_ARATH | 26.168 | 321 | 207 | 9 | 173 | 474 | 418 | 727 | 3.00e-17 | 89.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0216840 | Msa0333860 | 0.847479 | 1.127150e-59 | -8.615850e-47 |
| Msa0296040 | Msa0333860 | 0.900589 | 6.300686e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333860 | MtrunA17_Chr2g0318431 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1063 |
| Msa0333860 | MtrunA17_Chr7g0240091 | 29.680 | 219 | 138 | 5 | 241 | 445 | 225 | 441 | 2.89e-18 | 87.4 |
| Msa0333860 | MtrunA17_Chr3g0114241 | 28.287 | 251 | 159 | 6 | 173 | 408 | 426 | 670 | 5.53e-17 | 84.3 |
| Msa0333860 | MtrunA17_Chr2g0320711 | 21.992 | 241 | 174 | 3 | 179 | 410 | 155 | 390 | 3.62e-13 | 71.6 |
| Msa0333860 | MtrunA17_Chr3g0090071 | 26.554 | 177 | 124 | 2 | 238 | 408 | 164 | 340 | 4.12e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333860 | AT5G24690.1 | 66.729 | 538 | 147 | 10 | 3 | 526 | 2 | 521 | 0.0 | 617 |
| Msa0333860 | AT3G56140.2 | 25.392 | 319 | 212 | 7 | 173 | 474 | 199 | 508 | 1.22e-18 | 89.4 |
| Msa0333860 | AT3G56140.1 | 26.168 | 321 | 207 | 9 | 173 | 474 | 418 | 727 | 3.05e-18 | 89.0 |
| Msa0333860 | AT3G56140.3 | 26.168 | 321 | 207 | 9 | 173 | 474 | 418 | 727 | 3.05e-18 | 89.0 |
| Msa0333860 | AT2G40400.2 | 25.692 | 253 | 165 | 4 | 173 | 409 | 409 | 654 | 2.39e-17 | 85.9 |
| Msa0333860 | AT2G40400.1 | 25.692 | 253 | 165 | 4 | 173 | 409 | 409 | 654 | 2.39e-17 | 85.9 |
| Msa0333860 | AT2G40400.3 | 25.703 | 249 | 162 | 4 | 173 | 405 | 409 | 650 | 3.38e-16 | 82.0 |
| Msa0333860 | AT5G22790.1 | 28.019 | 207 | 136 | 5 | 241 | 434 | 209 | 415 | 9.56e-16 | 80.1 |
| Msa0333860 | AT2G37860.3 | 27.222 | 180 | 122 | 2 | 241 | 411 | 209 | 388 | 5.97e-15 | 77.4 |
| Msa0333860 | AT2G37860.4 | 27.222 | 180 | 122 | 2 | 241 | 411 | 209 | 388 | 5.97e-15 | 77.4 |
Find 169 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTGTCCTTGGTGGTTTC+TGG | 0.099632 | 2_4:+51939250 | Msa0333860:three_prime_UTR |
| TCAAAGAATGCAGTTGTTTC+TGG | 0.145362 | 2_4:+51939043 | Msa0333860:CDS |
| TTGAAATGAGCTATCCTCTT+AGG | 0.209103 | 2_4:+51938153 | Msa0333860:CDS |
| GTTCGTCAGTTTGATGTTAT+TGG | 0.210309 | 2_4:+51938560 | Msa0333860:CDS |
| TGTTTCTGGGCTTGGTCTCT+TGG | 0.267949 | 2_4:+51939057 | Msa0333860:CDS |
| TGGGTTGGTTGATCCCTCTA+TGG | 0.281280 | 2_4:+51933912 | Msa0333860:five_prime_UTR |
| CTCCCAAAGCTCGTCGAAAA+AGG | 0.281953 | 2_4:+51939125 | Msa0333860:CDS |
| TTGCTAAGAATTTCACCATT+TGG | 0.287583 | 2_4:-51937261 | None:intergenic |
| AAACACTTTGGCTAAGAAAA+AGG | 0.291899 | 2_4:+51938274 | Msa0333860:CDS |
| GGGAGTTTAGGGAAGGGTTT+TGG | 0.293170 | 2_4:-51934119 | None:intergenic |
| GCCGCGCCTCCTTCCGCTTC+CGG | 0.298518 | 2_4:+51934260 | Msa0333860:CDS |
| TACGGAGGAGAGGGAGTTTA+GGG | 0.300913 | 2_4:-51934130 | None:intergenic |
| TGCTAAGAATTTCACCATTT+GGG | 0.301877 | 2_4:-51937260 | None:intergenic |
| TTACGGAGGAGAGGGAGTTT+AGG | 0.308680 | 2_4:-51934131 | None:intergenic |
| CATGCAATGCCGTTGTTGTT+TGG | 0.314152 | 2_4:+51938048 | Msa0333860:CDS |
| CAGACCCTGCTTTCATGTAT+AGG | 0.316471 | 2_4:+51937819 | Msa0333860:CDS |
| CTCATTTCAAATATGTTGTT+TGG | 0.318442 | 2_4:-51938140 | None:intergenic |
| AACTCCAAGCCAGGCACGTT+TGG | 0.323970 | 2_4:-51938924 | None:intergenic |
| GCAAAATAGAGAAGTCTCTT+TGG | 0.324116 | 2_4:+51933886 | None:intergenic |
| TGGATTTGCCTGCTGGATTT+CGG | 0.338280 | 2_4:+51937130 | Msa0333860:CDS |
| ACACAGCATCCACAAATTTA+CGG | 0.348932 | 2_4:-51937083 | None:intergenic |
| TGTTCTTCAGCACAGCATTC+AGG | 0.350694 | 2_4:+51938591 | Msa0333860:CDS |
| GAAGGGATGGATGAGTTCAT+TGG | 0.350804 | 2_4:-51934083 | None:intergenic |
| AATGCAGTTGTTTCTGGGCT+TGG | 0.351608 | 2_4:+51939049 | Msa0333860:CDS |
| GTTTCTGGGCTTGGTCTCTT+GGG | 0.363561 | 2_4:+51939058 | Msa0333860:CDS |
| CAGGGTGTTAAACGTTCAAC+TGG | 0.367842 | 2_4:+51938892 | Msa0333860:intron |
| CAAAATAGAGAAGTCTCTTT+GGG | 0.370205 | 2_4:+51933887 | None:intergenic |
| AGAGAAGTCTCTTTGGGATT+GGG | 0.378430 | 2_4:+51933893 | None:intergenic |
| TAGAGAAGTCTCTTTGGGAT+TGG | 0.390738 | 2_4:+51933892 | None:intergenic |
| CCGTATTTACCTTTCATAAC+CGG | 0.395087 | 2_4:-51934293 | None:intergenic |
| CCGTTCAAGCAGCGAGGAAC+CGG | 0.396666 | 2_4:-51934222 | None:intergenic |
| AACAACCATCATCCTCAAAA+TGG | 0.398226 | 2_4:+51939014 | Msa0333860:CDS |
| CAAAGAATGCAGTTGTTTCT+GGG | 0.400070 | 2_4:+51939044 | Msa0333860:CDS |
| GAAGCGGAAGGAGGCGCGGC+CGG | 0.402187 | 2_4:-51934257 | None:intergenic |
| TTTAAGCGCGGGTGCAGTAC+AGG | 0.403623 | 2_4:+51938241 | Msa0333860:CDS |
| GCGTGAGACGACATCGTTTA+GGG | 0.407867 | 2_4:-51934035 | None:intergenic |
| AACTCTTGAAAGTTTACAAC+AGG | 0.411065 | 2_4:+51938975 | Msa0333860:CDS |
| CATAACCGGATTAATGTTAC+CGG | 0.413040 | 2_4:-51934279 | None:intergenic |
| GAAGTATGCGTCTTCTAAAC+AGG | 0.414202 | 2_4:-51936907 | None:intergenic |
| TGAAATGAGCTATCCTCTTA+GGG | 0.414318 | 2_4:+51938154 | Msa0333860:CDS |
| CTTGCTCCTTGTCGATCATA+TGG | 0.419050 | 2_4:+51938074 | Msa0333860:CDS |
| CGCGTGAGACGACATCGTTT+AGG | 0.420756 | 2_4:-51934036 | None:intergenic |
| TTCTGGCTGCTGCTCTAGGA+GGG | 0.421378 | 2_4:+51939267 | Msa0333860:three_prime_UTR |
| ACTATCATGGATTTGCCTGC+TGG | 0.422360 | 2_4:+51937123 | Msa0333860:CDS |
| ATTGTTGAGAGTGGAGAGGA+AGG | 0.425313 | 2_4:-51933949 | None:intergenic |
| CTGGATCGGCCTAGATTCTT+CGG | 0.429225 | 2_4:+51939170 | Msa0333860:exon |
| TTCAGTAATATTGTAGGTGA+TGG | 0.430573 | 2_4:-51939320 | None:intergenic |
| TGGTTTCTGGCTGCTGCTCT+AGG | 0.435012 | 2_4:+51939263 | Msa0333860:three_prime_UTR |
| GCTATTTGACCGTAAATTTG+TGG | 0.435761 | 2_4:+51937074 | Msa0333860:intron |
| CGCTTCCGGTAACATTAATC+CGG | 0.439389 | 2_4:+51934274 | Msa0333860:CDS |
| AAGCCTACTGGCAGTTGGCC+TGG | 0.440504 | 2_4:-51937290 | None:intergenic |
| TGATACTGCTGTATTGTCCT+TGG | 0.440868 | 2_4:+51939240 | Msa0333860:three_prime_UTR |
| AAAGGTAAATACGGTGCGTT+TGG | 0.441403 | 2_4:+51934302 | Msa0333860:CDS |
| CCGGTTCCTCGCTGCTTGAA+CGG | 0.442423 | 2_4:+51934222 | Msa0333860:CDS |
| TACTTTGATGACTTTGATGA+TGG | 0.442659 | 2_4:+51936863 | Msa0333860:CDS |
| TGTTTACATCCGAAGAATCT+AGG | 0.443496 | 2_4:-51939179 | None:intergenic |
| ACTTCCAAACGTGCCTGGCT+TGG | 0.443805 | 2_4:+51938920 | Msa0333860:CDS |
| TATCAAGATCTTTCATTGGC+AGG | 0.445171 | 2_4:+51937338 | Msa0333860:CDS |
| TGCAGGTCAAATTCCCTAAG+AGG | 0.447055 | 2_4:-51938167 | None:intergenic |
| GGACTATCAAGATCTTTCAT+TGG | 0.448462 | 2_4:+51937334 | Msa0333860:CDS |
| CTTGGTTAGCTCAGCCCAAA+TGG | 0.451387 | 2_4:+51937246 | Msa0333860:CDS |
| CTTTATTGACAGCTAGCCAC+TGG | 0.453175 | 2_4:+51936761 | Msa0333860:intron |
| AAGGGATGGATGAGTTCATT+GGG | 0.454914 | 2_4:-51934082 | None:intergenic |
| TACTGCTGTATTGTCCTTGG+TGG | 0.459021 | 2_4:+51939243 | Msa0333860:three_prime_UTR |
| AGTTTACAAATCGGAAAGAT+AGG | 0.464129 | 2_4:+51937888 | Msa0333860:CDS |
| GAGAGGAAGGAGAAGAAGAT+AGG | 0.464856 | 2_4:-51933936 | None:intergenic |
| ATCAGTTATGGTGGTGGTGA+TGG | 0.468563 | 2_4:+51936812 | Msa0333860:CDS |
| GGGTTGGTTGATCCCTCTAT+GGG | 0.472792 | 2_4:+51933913 | Msa0333860:five_prime_UTR |
| CAAGACGGCGGTGACGGTTA+CGG | 0.473141 | 2_4:-51934148 | None:intergenic |
| CGGATTAATGTTACCGGAAG+CGG | 0.473328 | 2_4:-51934273 | None:intergenic |
| CACATAGCAGTTGATATCTC+AGG | 0.479279 | 2_4:-51938520 | None:intergenic |
| TGAACGGTGTTTCGCTGCTC+CGG | 0.487700 | 2_4:+51934238 | Msa0333860:CDS |
| ATCTGCCTCAACTCCAAGCC+AGG | 0.489398 | 2_4:-51938933 | None:intergenic |
| TCAGTAATATTGTAGGTGAT+GGG | 0.493456 | 2_4:-51939319 | None:intergenic |
| GAGAGACTTCCAAACGTGCC+TGG | 0.493581 | 2_4:+51938915 | Msa0333860:CDS |
| AGAAACCTATACATGAAAGC+AGG | 0.495167 | 2_4:-51937824 | None:intergenic |
| CGGTAGGCTGCTCTGTGTGG+TGG | 0.496241 | 2_4:+51937864 | Msa0333860:CDS |
| CCGGTTATGAAAGGTAAATA+CGG | 0.497596 | 2_4:+51934293 | Msa0333860:CDS |
| GGTGATGGAGGTGATGATAA+TGG | 0.499387 | 2_4:+51936827 | Msa0333860:CDS |
| CTGCTATGTGGATTTGATAG+AGG | 0.504429 | 2_4:+51938533 | Msa0333860:CDS |
| ATTTCGGCAAGCTTATGAAA+TGG | 0.506671 | 2_4:+51937146 | Msa0333860:CDS |
| TATTGACAGCTAGCCACTGG+GGG | 0.508333 | 2_4:+51936764 | Msa0333860:intron |
| CGGGAGAAGCGGACCACGAT+CGG | 0.509858 | 2_4:-51934175 | None:intergenic |
| GCTGCTGAGTTGTGCATGGT+TGG | 0.511086 | 2_4:+51938218 | Msa0333860:CDS |
| GGTCTCTTGGGCATCAAACA+AGG | 0.512113 | 2_4:+51939070 | Msa0333860:CDS |
| GAGGAGAGGGAGTTTAGGGA+AGG | 0.512666 | 2_4:-51934126 | None:intergenic |
| ATATCGCTGTCGACATCGGC+GGG | 0.513440 | 2_4:-51934194 | None:intergenic |
| TTGACAGCTAGCCACTGGGG+GGG | 0.517863 | 2_4:+51936766 | Msa0333860:intron |
| TGGATGCTGTGTTGAATGAA+TGG | 0.518394 | 2_4:+51937094 | Msa0333860:CDS |
| ATTGGAAAGATAATCAGTTA+TGG | 0.523781 | 2_4:+51936800 | Msa0333860:CDS |
| TTTCTGGCTGCTGCTCTAGG+AGG | 0.530235 | 2_4:+51939266 | Msa0333860:three_prime_UTR |
| AAGTCTCTTTGGGATTGGGT+TGG | 0.530290 | 2_4:+51933897 | Msa0333860:five_prime_UTR |
| AACATTAATCCGGTTATGAA+AGG | 0.530557 | 2_4:+51934284 | Msa0333860:CDS |
| CAAGGGAATGCAGATGTGTC+TGG | 0.532654 | 2_4:+51939088 | Msa0333860:CDS |
| GACTTTGATGATGGTGATGA+GGG | 0.532919 | 2_4:+51936872 | Msa0333860:CDS |
| AGGAGAGGGAGTTTAGGGAA+GGG | 0.533110 | 2_4:-51934125 | None:intergenic |
| TCTGGCTGCTGCTCTAGGAG+GGG | 0.534093 | 2_4:+51939268 | Msa0333860:three_prime_UTR |
| GATGGTGATGAGGGAGATGA+AGG | 0.535109 | 2_4:+51936881 | Msa0333860:CDS |
| TTTATTGACAGCTAGCCACT+GGG | 0.539795 | 2_4:+51936762 | Msa0333860:intron |
| GTCGACAGCGATATTTCCTC+CGG | 0.540129 | 2_4:+51934203 | Msa0333860:CDS |
| ACGTGCCTGGCTTGGAGTTG+AGG | 0.540692 | 2_4:+51938928 | Msa0333860:CDS |
| GAAATAAGCCTACTGGCAGT+TGG | 0.543973 | 2_4:-51937295 | None:intergenic |
| GTCGACATCGGCGGGAGAAG+CGG | 0.545373 | 2_4:-51934186 | None:intergenic |
| AAGACGCATACTTCTTCAAG+AGG | 0.549712 | 2_4:+51936916 | Msa0333860:CDS |
| CTTCGATTTCTCGAGCGTAA+CGG | 0.550925 | 2_4:-51934327 | None:intergenic |
| AGCAGTAATGCACTTGGCTA+TGG | 0.551775 | 2_4:+51938473 | Msa0333860:CDS |
| GGTAGGCTGCTCTGTGTGGT+GGG | 0.552612 | 2_4:+51937865 | Msa0333860:CDS |
| GGAAATATCGCTGTCGACAT+CGG | 0.555376 | 2_4:-51934198 | None:intergenic |
| AGTTCATCTGACTGAGCTAG+TGG | 0.556219 | 2_4:-51938956 | None:intergenic |
| TGCATGGTTGGTTTAAGCGC+GGG | 0.557360 | 2_4:+51938230 | Msa0333860:CDS |
| GGGTGCATTGTCAAACACTT+TGG | 0.559747 | 2_4:+51938262 | Msa0333860:CDS |
| GGATAACAAGACGGCGGTGA+CGG | 0.559797 | 2_4:-51934154 | None:intergenic |
| TTAAGCGCGGGTGCAGTACA+GGG | 0.561396 | 2_4:+51938242 | Msa0333860:CDS |
| AATTCTTAGCAATGAATGCC+AGG | 0.562493 | 2_4:+51937272 | Msa0333860:CDS |
| CTGAGATATCAACTGCTATG+TGG | 0.569147 | 2_4:+51938521 | Msa0333860:CDS |
| TCTATTAGAGCAAGTTGCTA+CGG | 0.569531 | 2_4:+51937844 | Msa0333860:CDS |
| CAAGGCTGCTGAGTTGTGCA+TGG | 0.572049 | 2_4:+51938214 | Msa0333860:CDS |
| TGAATGGCAAAGGACTATCA+TGG | 0.572451 | 2_4:+51937110 | Msa0333860:CDS |
| TAAGCTTGCCGAAATCCAGC+AGG | 0.573123 | 2_4:-51937138 | None:intergenic |
| ATTGACAGCTAGCCACTGGG+GGG | 0.573621 | 2_4:+51936765 | Msa0333860:intron |
| CATATGATCGACAAGGAGCA+AGG | 0.573804 | 2_4:-51938073 | None:intergenic |
| AAGAACTGAATTGTTGAGAG+TGG | 0.574354 | 2_4:-51933958 | None:intergenic |
| GGTGACGGTTACGGAGGAGA+GGG | 0.577402 | 2_4:-51934139 | None:intergenic |
| CTGAATTGTTGAGAGTGGAG+AGG | 0.579781 | 2_4:-51933953 | None:intergenic |
| ACCGGAAGCGGAAGGAGGCG+CGG | 0.580831 | 2_4:-51934261 | None:intergenic |
| TGTGGTGGGAGTTTACAAAT+CGG | 0.581274 | 2_4:+51937879 | Msa0333860:CDS |
| TGACTTTGATGATGGTGATG+AGG | 0.586108 | 2_4:+51936871 | Msa0333860:CDS |
| GGAAAGATAATCAGTTATGG+TGG | 0.588023 | 2_4:+51936803 | Msa0333860:CDS |
| GGATGGATGAGTTCATTGGG+AGG | 0.588310 | 2_4:-51934079 | None:intergenic |
| AGTTATGGTGGTGGTGATGG+AGG | 0.594111 | 2_4:+51936815 | Msa0333860:CDS |
| AGAAGAAGATAGGCCCATAG+AGG | 0.594653 | 2_4:-51933926 | None:intergenic |
| CGGTGACGGTTACGGAGGAG+AGG | 0.603340 | 2_4:-51934140 | None:intergenic |
| AGTGCATTACTGCTCACAGT+TGG | 0.605764 | 2_4:-51938464 | None:intergenic |
| GAAACCTATACATGAAAGCA+GGG | 0.605957 | 2_4:-51937823 | None:intergenic |
| GTCTCTTGGGCATCAAACAA+GGG | 0.607736 | 2_4:+51939071 | Msa0333860:CDS |
| TTAGAGCAAGTTGCTACGGT+AGG | 0.608583 | 2_4:+51937848 | Msa0333860:CDS |
| AAGTAACAAGTCTGCGCCTG+AGG | 0.609651 | 2_4:+51934370 | Msa0333860:CDS |
| GAAGAAGATAGGCCCATAGA+GGG | 0.609825 | 2_4:-51933925 | None:intergenic |
| AACAACAACGGCATTGCATG+CGG | 0.610056 | 2_4:-51938045 | None:intergenic |
| TTATTGACAGCTAGCCACTG+GGG | 0.618084 | 2_4:+51936763 | Msa0333860:intron |
| GAGACGACATCGTTTAGGGA+TGG | 0.621378 | 2_4:-51934031 | None:intergenic |
| TTCAAGCAGCGAGGAACCGG+AGG | 0.621943 | 2_4:-51934219 | None:intergenic |
| AATATCGCTGTCGACATCGG+CGG | 0.624159 | 2_4:-51934195 | None:intergenic |
| CTACGGTAGGCTGCTCTGTG+TGG | 0.624582 | 2_4:+51937861 | Msa0333860:CDS |
| CAGTAATATTGTAGGTGATG+GGG | 0.624758 | 2_4:-51939318 | None:intergenic |
| ATGTTACCGGAAGCGGAAGG+AGG | 0.631148 | 2_4:-51934266 | None:intergenic |
| CTGTGTTGAATGAATGGCAA+AGG | 0.635333 | 2_4:+51937100 | Msa0333860:CDS |
| ATGTGGATTTGATAGAGGAA+TGG | 0.635556 | 2_4:+51938538 | Msa0333860:CDS |
| AAGATAATCAGTTATGGTGG+TGG | 0.635917 | 2_4:+51936806 | Msa0333860:CDS |
| ATTACTGCTCACAGTTGGAA+CGG | 0.641868 | 2_4:-51938459 | None:intergenic |
| GACGGCGGTGACGGTTACGG+AGG | 0.646221 | 2_4:-51934145 | None:intergenic |
| ATATGATCGACAAGGAGCAA+GGG | 0.646370 | 2_4:-51938072 | None:intergenic |
| ATTTCCAGAAAACTACCGCA+AGG | 0.647382 | 2_4:+51937313 | Msa0333860:CDS |
| GCCGTCTTGTTATCCGATCG+TGG | 0.647592 | 2_4:+51934162 | Msa0333860:CDS |
| GTGCATGGTTGGTTTAAGCG+CGG | 0.651626 | 2_4:+51938229 | Msa0333860:CDS |
| ACTGTGAGCAGTAATGCACT+TGG | 0.654487 | 2_4:+51938467 | Msa0333860:CDS |
| AAAGATCTTGATAGTCCTTG+CGG | 0.654748 | 2_4:-51937328 | None:intergenic |
| ACCACGATCGGATAACAAGA+CGG | 0.656119 | 2_4:-51934163 | None:intergenic |
| AGCAAGGGACCAAACAACAA+CGG | 0.657203 | 2_4:-51938057 | None:intergenic |
| CATTGCATGCGGCTGCAGTG+AGG | 0.659429 | 2_4:-51938034 | None:intergenic |
| ATGCCAGGCCAACTGCCAGT+AGG | 0.660255 | 2_4:+51937287 | Msa0333860:CDS |
| AATATTGTAGGTGATGGGGA+CGG | 0.674222 | 2_4:-51939314 | None:intergenic |
| TTAATGTTACCGGAAGCGGA+AGG | 0.680051 | 2_4:-51934269 | None:intergenic |
| GTGTTTCCATATGATCGACA+AGG | 0.689294 | 2_4:-51938080 | None:intergenic |
| AGGGTGTTAAACGTTCAACT+GGG | 0.694208 | 2_4:+51938893 | Msa0333860:intron |
| GGTGATGAGGGAGATGAAGG+TGG | 0.707528 | 2_4:+51936884 | Msa0333860:CDS |
| GCAGCAGCCAGAAACCACCA+AGG | 0.727389 | 2_4:-51939257 | None:intergenic |
| GAAACACCGTTCAAGCAGCG+AGG | 0.728116 | 2_4:-51934228 | None:intergenic |
| ACGATCGGATAACAAGACGG+CGG | 0.806476 | 2_4:-51934160 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATATATTAAAATACAA+CGG | - | chr2_4:51935892-51935911 | None:intergenic | 10.0% |
| !!! | CTTTTTATGTTTTTTTTATT+TGG | + | chr2_4:51936709-51936728 | Msa0333860:intron | 10.0% |
| !!! | TAACTAAAATTATGATTTTA+GGG | + | chr2_4:51937223-51937242 | Msa0333860:intron | 10.0% |
| !! | AAAGAAAAAAAAACATAAAT+GGG | - | chr2_4:51939370-51939389 | None:intergenic | 10.0% |
| !! | AAAAGAAAAAAAAACATAAA+TGG | - | chr2_4:51939371-51939390 | None:intergenic | 10.0% |
| !! | AATTATATTGTTTGTGTTTA+CGG | + | chr2_4:51934507-51934526 | Msa0333860:intron | 15.0% |
| !! | AATTAATTATTAAACTTCAG+TGG | + | chr2_4:51934580-51934599 | Msa0333860:intron | 15.0% |
| !! | AATTGTATAATCATATTTGT+CGG | + | chr2_4:51934879-51934898 | Msa0333860:intron | 15.0% |
| !!! | AAAATTAATCTGTTTGTTAT+GGG | + | chr2_4:51935188-51935207 | Msa0333860:intron | 15.0% |
| !!! | TGTTTTTTTATGCAAATATT+AGG | + | chr2_4:51935384-51935403 | Msa0333860:intron | 15.0% |
| !!! | TTTTATACATCAAAATATTC+AGG | - | chr2_4:51935696-51935715 | None:intergenic | 15.0% |
| !! | AGAAAAAGGATATATTATAA+AGG | + | chr2_4:51935770-51935789 | Msa0333860:intron | 15.0% |
| !!! | CTAACTAAAATTATGATTTT+AGG | + | chr2_4:51937222-51937241 | Msa0333860:intron | 15.0% |
| !!! | GTTAACTTTATTTTGATTTT+AGG | + | chr2_4:51937976-51937995 | Msa0333860:intron | 15.0% |
| !!! | TATTGATAACATTTTCTAAA+TGG | - | chr2_4:51938797-51938816 | None:intergenic | 15.0% |
| !! | AAAAAATTCAGTAATATTGT+AGG | - | chr2_4:51939329-51939348 | None:intergenic | 15.0% |
| !!! | AATATTACTGAATTTTTTCA+GGG | + | chr2_4:51939331-51939350 | Msa0333860:three_prime_UTR | 15.0% |
| !! | TTGACTTATCATTGTTAAAA+CGG | + | chr2_4:51934761-51934780 | Msa0333860:intron | 20.0% |
| !!! | GAAAATTAATCTGTTTGTTA+TGG | + | chr2_4:51935187-51935206 | Msa0333860:intron | 20.0% |
| !!! | AAATATTAGGTTGTTTGTTT+AGG | + | chr2_4:51935397-51935416 | Msa0333860:intron | 20.0% |
| !! | ATTGTAGGAAAATATTTGTT+AGG | + | chr2_4:51935632-51935651 | Msa0333860:intron | 20.0% |
| !!! | CAGTTTTCTTTTTTAGAAAA+AGG | + | chr2_4:51935756-51935775 | Msa0333860:intron | 20.0% |
| !! | AATATATTAAAATACAACGG+AGG | - | chr2_4:51935889-51935908 | None:intergenic | 20.0% |
| !!! | TATATTTTGTCAAAGAAACT+TGG | + | chr2_4:51935903-51935922 | Msa0333860:intron | 20.0% |
| !! | ATCACTACAATTTATAATCT+GGG | + | chr2_4:51935981-51936000 | Msa0333860:intron | 20.0% |
| !! | ATAAATTAAAGAACATCAAG+TGG | + | chr2_4:51936226-51936245 | Msa0333860:intron | 20.0% |
| !! | TAAATTAAAGAACATCAAGT+GGG | + | chr2_4:51936227-51936246 | Msa0333860:intron | 20.0% |
| !! | TTAATTAGTGAAATGATTTC+TGG | + | chr2_4:51936397-51936416 | Msa0333860:intron | 20.0% |
| !! | TAATTAGTGAAATGATTTCT+GGG | + | chr2_4:51936398-51936417 | Msa0333860:intron | 20.0% |
| !! | CAAGCTAATATAAAAATAAG+CGG | + | chr2_4:51936478-51936497 | Msa0333860:intron | 20.0% |
| !! | AAATGTATTATGAATCCAAA+TGG | + | chr2_4:51936599-51936618 | Msa0333860:intron | 20.0% |
| !! | CATTTATGTTATTAAATTGC+AGG | + | chr2_4:51936949-51936968 | Msa0333860:intron | 20.0% |
| !!! | AAAGGTATTTGAACAAAAAT+TGG | - | chr2_4:51937478-51937497 | None:intergenic | 20.0% |
| !!! | TGTATAAAATTATTTTGCAC+AGG | + | chr2_4:51937789-51937808 | Msa0333860:intron | 20.0% |
| !!! | TTGTCTATTTTGAAAAGATA+TGG | + | chr2_4:51937915-51937934 | Msa0333860:intron | 20.0% |
| !! | AAAAGATATGGAAGTTTATT+GGG | + | chr2_4:51937927-51937946 | Msa0333860:intron | 20.0% |
| !!! | ATCAATAGTTTTGTATGTAT+TGG | + | chr2_4:51938810-51938829 | Msa0333860:intron | 20.0% |
| !!! | TGTCAAATTTTTTTGATTAC+TGG | + | chr2_4:51939209-51939228 | Msa0333860:three_prime_UTR | 20.0% |
| !!! | CAATATTACTGAATTTTTTC+AGG | + | chr2_4:51939330-51939349 | Msa0333860:three_prime_UTR | 20.0% |
| ! | TTTCTTTCTTCACTAGAATT+AGG | + | chr2_4:51934406-51934425 | Msa0333860:intron | 25.0% |
| ! | TTCTTTCTTCACTAGAATTA+GGG | + | chr2_4:51934407-51934426 | Msa0333860:intron | 25.0% |
| !! | CTTAATAACTTGTAGAGAAT+TGG | + | chr2_4:51934730-51934749 | Msa0333860:intron | 25.0% |
| ! | TAAAATGAATCTGTCTGTTA+TGG | + | chr2_4:51935249-51935268 | Msa0333860:intron | 25.0% |
| ! | AAAATGAATCTGTCTGTTAT+GGG | + | chr2_4:51935250-51935269 | Msa0333860:intron | 25.0% |
| ! | TTCAATTAAGGTAATTCCTA+AGG | - | chr2_4:51935557-51935576 | None:intergenic | 25.0% |
| ! | GTGATCAAATGATTCAATTA+AGG | - | chr2_4:51935569-51935588 | None:intergenic | 25.0% |
| ! | CATCACTACAATTTATAATC+TGG | + | chr2_4:51935980-51935999 | Msa0333860:intron | 25.0% |
| ! | TTTATCTGCATTGCAAAAAT+TGG | - | chr2_4:51936162-51936181 | None:intergenic | 25.0% |
| ! | AATGCAGATAAAATAAGTGA+AGG | + | chr2_4:51936170-51936189 | Msa0333860:intron | 25.0% |
| !! | ATGTTTATACTTTGTTTCTC+TGG | + | chr2_4:51936341-51936360 | Msa0333860:intron | 25.0% |
| !! | TGTTTATACTTTGTTTCTCT+GGG | + | chr2_4:51936342-51936361 | Msa0333860:intron | 25.0% |
| ! | TATTTGATTAAATCTGTACG+AGG | - | chr2_4:51936633-51936652 | None:intergenic | 25.0% |
| ! | ATTGGAAAGATAATCAGTTA+TGG | + | chr2_4:51936800-51936819 | Msa0333860:CDS | 25.0% |
| ! | TTTACAGTTTATGCTTGTTT+AGG | + | chr2_4:51937177-51937196 | Msa0333860:intron | 25.0% |
| !!! | TCATAATTTTAGTTAGTACG+CGG | - | chr2_4:51937218-51937237 | None:intergenic | 25.0% |
| !!! | AAAATTATGATTTTAGGGCT+TGG | + | chr2_4:51937228-51937247 | Msa0333860:intron | 25.0% |
| ! | AGGTAATCTCAATTATGTTT+CGG | + | chr2_4:51937358-51937377 | Msa0333860:intron | 25.0% |
| !!! | TTTTATCCTGAAAGTATAAC+AGG | + | chr2_4:51937578-51937597 | Msa0333860:intron | 25.0% |
| !! | TTTATCCTGAAAGTATAACA+GGG | + | chr2_4:51937579-51937598 | Msa0333860:intron | 25.0% |
| ! | TCATCAAATCTTGAATATGA+TGG | + | chr2_4:51937711-51937730 | Msa0333860:intron | 25.0% |
| !! | AGATTGATGAATATTCCTTT+TGG | + | chr2_4:51937734-51937753 | Msa0333860:intron | 25.0% |
| ! | GAAAAGATATGGAAGTTTAT+TGG | + | chr2_4:51937926-51937945 | Msa0333860:intron | 25.0% |
| ! | AAAGATATGGAAGTTTATTG+GGG | + | chr2_4:51937928-51937947 | Msa0333860:intron | 25.0% |
| ! | CTCATTTCAAATATGTTGTT+TGG | - | chr2_4:51938143-51938162 | None:intergenic | 25.0% |
| ! | TGAAAGGAAACAATACTTAT+TGG | + | chr2_4:51938693-51938712 | Msa0333860:intron | 25.0% |
| !! | ATAACATTTTCTAAATGGAG+AGG | - | chr2_4:51938792-51938811 | None:intergenic | 25.0% |
| !!! | ACTATTGTTGAATTTTGATG+TGG | + | chr2_4:51938838-51938857 | Msa0333860:intron | 25.0% |
| !! | CTTTGATATAAACCATTTTG+AGG | - | chr2_4:51939029-51939048 | None:intergenic | 25.0% |
| GAAAGAGAGAAAGTGAAAAA+CGG | - | chr2_4:51933997-51934016 | None:intergenic | 30.0% | |
| !!! | TTGGTGATAAGGTTTTAGAA+GGG | - | chr2_4:51934103-51934122 | None:intergenic | 30.0% |
| !!! | TTTGGTGATAAGGTTTTAGA+AGG | - | chr2_4:51934104-51934123 | None:intergenic | 30.0% |
| AACATTAATCCGGTTATGAA+AGG | + | chr2_4:51934284-51934303 | Msa0333860:CDS | 30.0% | |
| AAAGAAATATGACAAACCTC+AGG | - | chr2_4:51934389-51934408 | None:intergenic | 30.0% | |
| GATCATTTCTTCAATTCAAC+AGG | - | chr2_4:51934478-51934497 | None:intergenic | 30.0% | |
| TGTTTACGGTACAATCAATT+AGG | + | chr2_4:51934521-51934540 | Msa0333860:intron | 30.0% | |
| TTATTAAACTTCAGTGGCTT+AGG | + | chr2_4:51934586-51934605 | Msa0333860:intron | 30.0% | |
| GTCGTTATAATCGTGAAAAA+TGG | + | chr2_4:51934647-51934666 | Msa0333860:intron | 30.0% | |
| TTGAATGCAATCACATGTAA+CGG | + | chr2_4:51934675-51934694 | Msa0333860:intron | 30.0% | |
| ! | TAACTTGTAGAGAATTGGTT+TGG | + | chr2_4:51934735-51934754 | Msa0333860:intron | 30.0% |
| TGTTTGTGTAAGTATGTGTT+TGG | - | chr2_4:51934826-51934845 | None:intergenic | 30.0% | |
| !!! | TATTTTTTCCAACTTTCCGT+CGG | + | chr2_4:51934971-51934990 | Msa0333860:intron | 30.0% |
| !!! | CACTTTTTCATTATTACCGA+CGG | - | chr2_4:51934990-51935009 | None:intergenic | 30.0% |
| TTATGCAAGATGTGTTGTAT+TGG | + | chr2_4:51935072-51935091 | Msa0333860:intron | 30.0% | |
| !! | TGTGAAGTATCGATTTGTTT+AGG | + | chr2_4:51935430-51935449 | Msa0333860:intron | 30.0% |
| AAACGTATTAATGTGAAGAC+TGG | - | chr2_4:51935490-51935509 | None:intergenic | 30.0% | |
| ! | AATTCCTAAGGCATTATATG+TGG | - | chr2_4:51935545-51935564 | None:intergenic | 30.0% |
| TCCAGCAAGAATTATATTGT+AGG | + | chr2_4:51935617-51935636 | Msa0333860:intron | 30.0% | |
| TCCTACAATATAATTCTTGC+TGG | - | chr2_4:51935621-51935640 | None:intergenic | 30.0% | |
| ! | AATATTTGTTAGGCCTACAT+CGG | + | chr2_4:51935642-51935661 | Msa0333860:intron | 30.0% |
| TCGAAGATATGTTCAGAAAT+GGG | + | chr2_4:51936052-51936071 | Msa0333860:intron | 30.0% | |
| !! | TATTTTGTTACTTCTGGTTG+CGG | + | chr2_4:51936097-51936116 | Msa0333860:intron | 30.0% |
| AGATAAAATAAGTGAAGGTG+AGG | + | chr2_4:51936175-51936194 | Msa0333860:intron | 30.0% | |
| !!! | AGTATTCAGTTTTTTACCTC+TGG | - | chr2_4:51936378-51936397 | None:intergenic | 30.0% |
| ! | ATTTTTCCTTCCCAATAAGT+GGG | - | chr2_4:51936444-51936463 | None:intergenic | 30.0% |
| ! | TATTTTTCCTTCCCAATAAG+TGG | - | chr2_4:51936445-51936464 | None:intergenic | 30.0% |
| AGAATTAACAAAGACTCCAA+TGG | - | chr2_4:51936691-51936710 | None:intergenic | 30.0% | |
| GCTGTCAATAAAGCATAAAA+AGG | - | chr2_4:51936754-51936773 | None:intergenic | 30.0% | |
| ! | TACTTTGATGACTTTGATGA+TGG | + | chr2_4:51936863-51936882 | Msa0333860:CDS | 30.0% |
| !! | TGTTTAGGTTGTAAAGCATT+TGG | + | chr2_4:51937192-51937211 | Msa0333860:intron | 30.0% |
| TGCTAAGAATTTCACCATTT+GGG | - | chr2_4:51937263-51937282 | None:intergenic | 30.0% | |
| TTGCTAAGAATTTCACCATT+TGG | - | chr2_4:51937264-51937283 | None:intergenic | 30.0% | |
| AAATTCATGATTCAGAAGCA+AGG | - | chr2_4:51937454-51937473 | None:intergenic | 30.0% | |
| ! | TCTCTCATTAAGATTTTCCT+CGG | - | chr2_4:51937538-51937557 | None:intergenic | 30.0% |
| TAAAACATAGATGAGAACTC+TGG | - | chr2_4:51937563-51937582 | None:intergenic | 30.0% | |
| ! | GGCTATATATTTTGCTTTCA+TGG | + | chr2_4:51937600-51937619 | Msa0333860:intron | 30.0% |
| ATACAACAATACACTCCAAA+AGG | - | chr2_4:51937752-51937771 | None:intergenic | 30.0% | |
| AGTTTACAAATCGGAAAGAT+AGG | + | chr2_4:51937888-51937907 | Msa0333860:CDS | 30.0% | |
| !!! | ATTTTAGGATTAAGCAAGAG+TGG | + | chr2_4:51937991-51938010 | Msa0333860:intron | 30.0% |
| !!! | TTTTAGGATTAAGCAAGAGT+GGG | + | chr2_4:51937992-51938011 | Msa0333860:intron | 30.0% |
| !! | AGTTCAATGCTTTTTGTTCA+AGG | + | chr2_4:51938196-51938215 | Msa0333860:CDS | 30.0% |
| AAACACTTTGGCTAAGAAAA+AGG | + | chr2_4:51938274-51938293 | Msa0333860:CDS | 30.0% | |
| AATGCTATTGAACATAAGCT+GGG | - | chr2_4:51938323-51938342 | None:intergenic | 30.0% | |
| TTTCCTCCTACTAAATAAGT+TGG | + | chr2_4:51938621-51938640 | Msa0333860:intron | 30.0% | |
| TTCCTCCTACTAAATAAGTT+GGG | + | chr2_4:51938622-51938641 | Msa0333860:intron | 30.0% | |
| AAATGCCCAACTTATTTAGT+AGG | - | chr2_4:51938630-51938649 | None:intergenic | 30.0% | |
| TTTCCTTTCAACAGGATAAA+GGG | - | chr2_4:51938683-51938702 | None:intergenic | 30.0% | |
| ! | AAGTATTGTTTCCTTTCAAC+AGG | - | chr2_4:51938691-51938710 | None:intergenic | 30.0% |
| ! | TTTTGATGTGGTATGTATTG+AGG | + | chr2_4:51938850-51938869 | Msa0333860:intron | 30.0% |
| TTTGATGTGGTATGTATTGA+GGG | + | chr2_4:51938851-51938870 | Msa0333860:intron | 30.0% | |
| AACTCTTGAAAGTTTACAAC+AGG | + | chr2_4:51938975-51938994 | Msa0333860:CDS | 30.0% | |
| !! | ATAAACCATTTTGAGGATGA+TGG | - | chr2_4:51939022-51939041 | None:intergenic | 30.0% |
| AAAAAGGATTGTACGGAAAA+AGG | + | chr2_4:51939141-51939160 | Msa0333860:CDS | 30.0% | |
| TCAGTAATATTGTAGGTGAT+GGG | - | chr2_4:51939322-51939341 | None:intergenic | 30.0% | |
| TTCAGTAATATTGTAGGTGA+TGG | - | chr2_4:51939323-51939342 | None:intergenic | 30.0% | |
| AAGAACTGAATTGTTGAGAG+TGG | - | chr2_4:51933961-51933980 | None:intergenic | 35.0% | |
| !!! | TGATAAGGTTTTAGAAGGGA+TGG | - | chr2_4:51934099-51934118 | None:intergenic | 35.0% |
| CATAACCGGATTAATGTTAC+CGG | - | chr2_4:51934282-51934301 | None:intergenic | 35.0% | |
| CCGTATTTACCTTTCATAAC+CGG | - | chr2_4:51934296-51934315 | None:intergenic | 35.0% | |
| CCGGTTATGAAAGGTAAATA+CGG | + | chr2_4:51934293-51934312 | Msa0333860:CDS | 35.0% | |
| TGTTATGGGAGATTACATGT+TGG | + | chr2_4:51935202-51935221 | Msa0333860:intron | 35.0% | |
| GTTATGGGAGATTACATGTT+GGG | + | chr2_4:51935203-51935222 | Msa0333860:intron | 35.0% | |
| ! | AGATTCATTTTACGTGTCCA+AGG | - | chr2_4:51935241-51935260 | None:intergenic | 35.0% |
| ATCGTGAAGACTTATGATGT+TGG | + | chr2_4:51935332-51935351 | Msa0333860:intron | 35.0% | |
| AGAACCACATATAATGCCTT+AGG | + | chr2_4:51935538-51935557 | Msa0333860:intron | 35.0% | |
| GTCGAAGATATGTTCAGAAA+TGG | + | chr2_4:51936051-51936070 | Msa0333860:intron | 35.0% | |
| !! | AGCTCCTATTTTGTTACTTC+TGG | + | chr2_4:51936091-51936110 | Msa0333860:intron | 35.0% |
| GCAACCAGAAGTAACAAAAT+AGG | - | chr2_4:51936098-51936117 | None:intergenic | 35.0% | |
| ATTAAAGAACATCAAGTGGG+AGG | + | chr2_4:51936230-51936249 | Msa0333860:intron | 35.0% | |
| TTAAAGAACATCAAGTGGGA+GGG | + | chr2_4:51936231-51936250 | Msa0333860:intron | 35.0% | |
| ! | TTTGAAGCATTCCCACTTAT+TGG | + | chr2_4:51936430-51936449 | Msa0333860:intron | 35.0% |
| ! | TTGAAGCATTCCCACTTATT+GGG | + | chr2_4:51936431-51936450 | Msa0333860:intron | 35.0% |
| GGAAAGATAATCAGTTATGG+TGG | + | chr2_4:51936803-51936822 | Msa0333860:CDS | 35.0% | |
| AAGATAATCAGTTATGGTGG+TGG | + | chr2_4:51936806-51936825 | Msa0333860:CDS | 35.0% | |
| !! | TTTTATTTGACGTCTCCTGA+AGG | + | chr2_4:51937019-51937038 | Msa0333860:intron | 35.0% |
| GCTATTTGACCGTAAATTTG+TGG | + | chr2_4:51937074-51937093 | Msa0333860:intron | 35.0% | |
| ACACAGCATCCACAAATTTA+CGG | - | chr2_4:51937086-51937105 | None:intergenic | 35.0% | |
| ATTTCGGCAAGCTTATGAAA+TGG | + | chr2_4:51937146-51937165 | Msa0333860:CDS | 35.0% | |
| AATTCTTAGCAATGAATGCC+AGG | + | chr2_4:51937272-51937291 | Msa0333860:CDS | 35.0% | |
| !! | TTTTCTGGAAATAAGCCTAC+TGG | - | chr2_4:51937305-51937324 | None:intergenic | 35.0% |
| ! | AAAGATCTTGATAGTCCTTG+CGG | - | chr2_4:51937331-51937350 | None:intergenic | 35.0% |
| GGACTATCAAGATCTTTCAT+TGG | + | chr2_4:51937334-51937353 | Msa0333860:CDS | 35.0% | |
| TATCAAGATCTTTCATTGGC+AGG | + | chr2_4:51937338-51937357 | Msa0333860:CDS | 35.0% | |
| CTGTAGCTTCTACTATAGAA+AGG | - | chr2_4:51937496-51937515 | None:intergenic | 35.0% | |
| ! | TCTCATTAAGATTTTCCTCG+GGG | - | chr2_4:51937536-51937555 | None:intergenic | 35.0% |
| ! | CTCTCATTAAGATTTTCCTC+GGG | - | chr2_4:51937537-51937556 | None:intergenic | 35.0% |
| TATAGCCCTGTTATACTTTC+AGG | - | chr2_4:51937587-51937606 | None:intergenic | 35.0% | |
| GACATCTATTCAATGTTCAC+AGG | - | chr2_4:51937656-51937675 | None:intergenic | 35.0% | |
| GAAACCTATACATGAAAGCA+GGG | - | chr2_4:51937826-51937845 | None:intergenic | 35.0% | |
| AGAAACCTATACATGAAAGC+AGG | - | chr2_4:51937827-51937846 | None:intergenic | 35.0% | |
| TCTATTAGAGCAAGTTGCTA+CGG | + | chr2_4:51937844-51937863 | Msa0333860:CDS | 35.0% | |
| TTGAAATGAGCTATCCTCTT+AGG | + | chr2_4:51938153-51938172 | Msa0333860:CDS | 35.0% | |
| TGAAATGAGCTATCCTCTTA+GGG | + | chr2_4:51938154-51938173 | Msa0333860:CDS | 35.0% | |
| ACTTTGGCTAAGAAAAAGGA+AGG | + | chr2_4:51938278-51938297 | Msa0333860:CDS | 35.0% | |
| GAATGCTATTGAACATAAGC+TGG | - | chr2_4:51938324-51938343 | None:intergenic | 35.0% | |
| !! | ATCTAGAGTGTTACTTGTGT+TGG | + | chr2_4:51938363-51938382 | Msa0333860:intron | 35.0% |
| ATCTGCATACAATTCATGCA+TGG | - | chr2_4:51938430-51938449 | None:intergenic | 35.0% | |
| ATGTGGATTTGATAGAGGAA+TGG | + | chr2_4:51938538-51938557 | Msa0333860:CDS | 35.0% | |
| GTTCGTCAGTTTGATGTTAT+TGG | + | chr2_4:51938560-51938579 | Msa0333860:CDS | 35.0% | |
| GTTTCCTTTCAACAGGATAA+AGG | - | chr2_4:51938684-51938703 | None:intergenic | 35.0% | |
| AACAACCATCATCCTCAAAA+TGG | + | chr2_4:51939014-51939033 | Msa0333860:CDS | 35.0% | |
| ! | TCAAAGAATGCAGTTGTTTC+TGG | + | chr2_4:51939043-51939062 | Msa0333860:CDS | 35.0% |
| !! | CAAAGAATGCAGTTGTTTCT+GGG | + | chr2_4:51939044-51939063 | Msa0333860:CDS | 35.0% |
| TGTTTACATCCGAAGAATCT+AGG | - | chr2_4:51939182-51939201 | None:intergenic | 35.0% | |
| CAGTAATATTGTAGGTGATG+GGG | - | chr2_4:51939321-51939340 | None:intergenic | 35.0% | |
| AAGGGATGGATGAGTTCATT+GGG | - | chr2_4:51934085-51934104 | None:intergenic | 40.0% | |
| AAAGGTAAATACGGTGCGTT+TGG | + | chr2_4:51934302-51934321 | Msa0333860:CDS | 40.0% | |
| GCGACAATAGAGGAAAATTC+AGG | + | chr2_4:51934697-51934716 | Msa0333860:intron | 40.0% | |
| AGAGGAAAATTCAGGAGTGA+AGG | + | chr2_4:51934705-51934724 | Msa0333860:intron | 40.0% | |
| ! | TTTTCCTTTCTGTGAAGCAC+CGG | + | chr2_4:51934792-51934811 | Msa0333860:intron | 40.0% |
| CATTATTACCGACGGAAAGT+TGG | - | chr2_4:51934982-51935001 | None:intergenic | 40.0% | |
| TTCGCTAATTGAGAAGCTGA+AGG | + | chr2_4:51935119-51935138 | Msa0333860:intron | 40.0% | |
| !!! | TGAGAAGCTGAAGGTGTTTT+TGG | + | chr2_4:51935128-51935147 | Msa0333860:intron | 40.0% |
| !!! | GTGTTTTTGGCGTCTGAAAT+TGG | + | chr2_4:51935141-51935160 | Msa0333860:intron | 40.0% |
| TGTTATGGGAGATTACGTGT+TGG | + | chr2_4:51935264-51935283 | Msa0333860:intron | 40.0% | |
| GTTATGGGAGATTACGTGTT+GGG | + | chr2_4:51935265-51935284 | Msa0333860:intron | 40.0% | |
| TGAAGACTTATGATGTTGGC+CGG | + | chr2_4:51935336-51935355 | Msa0333860:intron | 40.0% | |
| ATGTTGTGCAAAGTAGGTAG+CGG | - | chr2_4:51935963-51935982 | None:intergenic | 40.0% | |
| GTAGTGATGTTGTGCAAAGT+AGG | - | chr2_4:51935969-51935988 | None:intergenic | 40.0% | |
| TTTATAATCTGGGCCATGCA+TGG | + | chr2_4:51935991-51936010 | Msa0333860:intron | 40.0% | |
| TTATTTCGGTGAAGGGGAAA+GGG | + | chr2_4:51936124-51936143 | Msa0333860:intron | 40.0% | |
| TAGCAGTGAAAAGCCTAACA+GGG | - | chr2_4:51936205-51936224 | None:intergenic | 40.0% | |
| ATAGCAGTGAAAAGCCTAAC+AGG | - | chr2_4:51936206-51936225 | None:intergenic | 40.0% | |
| TAAAGAACATCAAGTGGGAG+GGG | + | chr2_4:51936232-51936251 | Msa0333860:intron | 40.0% | |
| CTTCCTCTTTCTCATTCTCT+AGG | - | chr2_4:51936276-51936295 | None:intergenic | 40.0% | |
| CTAGAGAATGAGAAAGAGGA+AGG | + | chr2_4:51936274-51936293 | Msa0333860:intron | 40.0% | |
| TTTAAAGGTCCTGTGGTTCA+GGG | - | chr2_4:51936306-51936325 | None:intergenic | 40.0% | |
| ! | AACCACAGGACCTTTAAAGA+GGG | + | chr2_4:51936308-51936327 | Msa0333860:intron | 40.0% |
| !!! | TTTTTTACCTCTGGTGCCAA+AGG | - | chr2_4:51936369-51936388 | None:intergenic | 40.0% |
| !! | TACGAGGTTGATACACCATT+TGG | - | chr2_4:51936617-51936636 | None:intergenic | 40.0% |
| TTTATTGACAGCTAGCCACT+GGG | + | chr2_4:51936762-51936781 | Msa0333860:intron | 40.0% | |
| !! | TGACTTTGATGATGGTGATG+AGG | + | chr2_4:51936871-51936890 | Msa0333860:CDS | 40.0% |
| !! | GACTTTGATGATGGTGATGA+GGG | + | chr2_4:51936872-51936891 | Msa0333860:CDS | 40.0% |
| GAAGTATGCGTCTTCTAAAC+AGG | - | chr2_4:51936910-51936929 | None:intergenic | 40.0% | |
| AAGACGCATACTTCTTCAAG+AGG | + | chr2_4:51936916-51936935 | Msa0333860:CDS | 40.0% | |
| AGCAGCGTCTATTTCACATA+GGG | - | chr2_4:51936982-51937001 | None:intergenic | 40.0% | |
| TAGCAGCGTCTATTTCACAT+AGG | - | chr2_4:51936983-51937002 | None:intergenic | 40.0% | |
| ACAACACAAGGACAAAATGG+CGG | - | chr2_4:51937050-51937069 | None:intergenic | 40.0% | |
| TGGATGCTGTGTTGAATGAA+TGG | + | chr2_4:51937094-51937113 | Msa0333860:CDS | 40.0% | |
| CTGTGTTGAATGAATGGCAA+AGG | + | chr2_4:51937100-51937119 | Msa0333860:CDS | 40.0% | |
| TGAATGGCAAAGGACTATCA+TGG | + | chr2_4:51937110-51937129 | Msa0333860:CDS | 40.0% | |
| ATTTCCAGAAAACTACCGCA+AGG | + | chr2_4:51937313-51937332 | Msa0333860:CDS | 40.0% | |
| TGATTCAGAAGCAAGGACAT+GGG | - | chr2_4:51937447-51937466 | None:intergenic | 40.0% | |
| ATGATTCAGAAGCAAGGACA+TGG | - | chr2_4:51937448-51937467 | None:intergenic | 40.0% | |
| TAGTAGAAGCTACAGAAGAG+AGG | + | chr2_4:51937501-51937520 | Msa0333860:intron | 40.0% | |
| ! | CTCATTAAGATTTTCCTCGG+GGG | - | chr2_4:51937535-51937554 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCAGACATGAG+AGG | - | chr2_4:51937678-51937697 | None:intergenic | 40.0% |
| ! | TGTGGTGGGAGTTTACAAAT+CGG | + | chr2_4:51937879-51937898 | Msa0333860:CDS | 40.0% |
| ATATGATCGACAAGGAGCAA+GGG | - | chr2_4:51938075-51938094 | None:intergenic | 40.0% | |
| GTGTTTCCATATGATCGACA+AGG | - | chr2_4:51938083-51938102 | None:intergenic | 40.0% | |
| !! | AGCATTGAACTCTCTTTTGC+AGG | - | chr2_4:51938187-51938206 | None:intergenic | 40.0% |
| TGGCTAAGAAAAAGGAAGGA+AGG | + | chr2_4:51938282-51938301 | Msa0333860:CDS | 40.0% | |
| ATTACTGCTCACAGTTGGAA+CGG | - | chr2_4:51938462-51938481 | None:intergenic | 40.0% | |
| ! | CACATAGCAGTTGATATCTC+AGG | - | chr2_4:51938523-51938542 | None:intergenic | 40.0% |
| CTGAGATATCAACTGCTATG+TGG | + | chr2_4:51938521-51938540 | Msa0333860:CDS | 40.0% | |
| CTGCTATGTGGATTTGATAG+AGG | + | chr2_4:51938533-51938552 | Msa0333860:CDS | 40.0% | |
| TGCCCAACTTATTTAGTAGG+AGG | - | chr2_4:51938627-51938646 | None:intergenic | 40.0% | |
| GTACCCTTTATCCTGTTGAA+AGG | + | chr2_4:51938677-51938696 | Msa0333860:intron | 40.0% | |
| !!! | ATCCTTTTTCGACGAGCTTT+GGG | - | chr2_4:51939130-51939149 | None:intergenic | 40.0% |
| !!! | AATCCTTTTTCGACGAGCTT+TGG | - | chr2_4:51939131-51939150 | None:intergenic | 40.0% |
| CTCGTCGAAAAAGGATTGTA+CGG | + | chr2_4:51939134-51939153 | Msa0333860:CDS | 40.0% | |
| TGATACTGCTGTATTGTCCT+TGG | + | chr2_4:51939240-51939259 | Msa0333860:three_prime_UTR | 40.0% | |
| GATGGGGACGGAAAAAATTT+GGG | - | chr2_4:51939305-51939324 | None:intergenic | 40.0% | |
| TGATGGGGACGGAAAAAATT+TGG | - | chr2_4:51939306-51939325 | None:intergenic | 40.0% | |
| !! | AATATTGTAGGTGATGGGGA+CGG | - | chr2_4:51939317-51939336 | None:intergenic | 40.0% |
| !! | AAGTCTCTTTGGGATTGGGT+TGG | + | chr2_4:51933897-51933916 | Msa0333860:five_prime_UTR | 45.0% |
| GAAGAAGATAGGCCCATAGA+GGG | - | chr2_4:51933928-51933947 | None:intergenic | 45.0% | |
| AGAAGAAGATAGGCCCATAG+AGG | - | chr2_4:51933929-51933948 | None:intergenic | 45.0% | |
| GAGAGGAAGGAGAAGAAGAT+AGG | - | chr2_4:51933939-51933958 | None:intergenic | 45.0% | |
| ATTGTTGAGAGTGGAGAGGA+AGG | - | chr2_4:51933952-51933971 | None:intergenic | 45.0% | |
| CTGAATTGTTGAGAGTGGAG+AGG | - | chr2_4:51933956-51933975 | None:intergenic | 45.0% | |
| GAAGGGATGGATGAGTTCAT+TGG | - | chr2_4:51934086-51934105 | None:intergenic | 45.0% | |
| !! | AGGGAAGGGTTTTGGTGATA+AGG | - | chr2_4:51934114-51934133 | None:intergenic | 45.0% |
| ACCACGATCGGATAACAAGA+CGG | - | chr2_4:51934166-51934185 | None:intergenic | 45.0% | |
| GGAAATATCGCTGTCGACAT+CGG | - | chr2_4:51934201-51934220 | None:intergenic | 45.0% | |
| TTAATGTTACCGGAAGCGGA+AGG | - | chr2_4:51934272-51934291 | None:intergenic | 45.0% | |
| CGGATTAATGTTACCGGAAG+CGG | - | chr2_4:51934276-51934295 | None:intergenic | 45.0% | |
| CGCTTCCGGTAACATTAATC+CGG | + | chr2_4:51934274-51934293 | Msa0333860:CDS | 45.0% | |
| CTTCGATTTCTCGAGCGTAA+CGG | - | chr2_4:51934330-51934349 | None:intergenic | 45.0% | |
| ACGACTTGTCAGTGCTTCAT+AGG | - | chr2_4:51934632-51934651 | None:intergenic | 45.0% | |
| ACATGTAACGGCGACAATAG+AGG | + | chr2_4:51934687-51934706 | Msa0333860:intron | 45.0% | |
| !! | TATGTGTTTGGTGTCTGTGC+CGG | - | chr2_4:51934814-51934833 | None:intergenic | 45.0% |
| TTACACAAACACGTCGACAC+TGG | + | chr2_4:51934835-51934854 | Msa0333860:intron | 45.0% | |
| !! | CATATTTGTCGGTGTCGTGT+TGG | + | chr2_4:51934890-51934909 | Msa0333860:intron | 45.0% |
| ! | CGTGTTGGTATCAGAAGTGA+AGG | + | chr2_4:51934905-51934924 | Msa0333860:intron | 45.0% |
| !! | CAGAAGTGAAGGTGCTACAA+AGG | + | chr2_4:51934916-51934935 | Msa0333860:intron | 45.0% |
| TGTGCAAATGTGTGCATGCT+TGG | + | chr2_4:51935042-51935061 | Msa0333860:intron | 45.0% | |
| TTGGGTTAAACGTGTTGCCT+TGG | + | chr2_4:51935221-51935240 | Msa0333860:intron | 45.0% | |
| TTGGGTTAAACGTGTTGCCT+TGG | + | chr2_4:51935221-51935240 | Msa0333860:intron | 45.0% | |
| GCCTTGGACACGTAAAATTG+CGG | + | chr2_4:51935299-51935318 | Msa0333860:intron | 45.0% | |
| ! | ACCGCAATTTTACGTGTCCA+AGG | - | chr2_4:51935303-51935322 | None:intergenic | 45.0% |
| CCTGTTTCATGTCACGAAAC+CGG | - | chr2_4:51935358-51935377 | None:intergenic | 45.0% | |
| !! | CTTGTGTGAAGTATCGTGTC+AGG | + | chr2_4:51935459-51935478 | Msa0333860:intron | 45.0% |
| ACACGCATCATCAATGCCAT+CGG | + | chr2_4:51935587-51935606 | Msa0333860:intron | 45.0% | |
| CTTGCTGGAAGAATAACCGA+TGG | - | chr2_4:51935606-51935625 | None:intergenic | 45.0% | |
| TGCAGGATTATCACCGATGT+AGG | - | chr2_4:51935658-51935677 | None:intergenic | 45.0% | |
| TGTTGTGCAAAGTAGGTAGC+GGG | - | chr2_4:51935962-51935981 | None:intergenic | 45.0% | |
| CTTTCCCCTTCACCGAAATA+AGG | - | chr2_4:51936125-51936144 | None:intergenic | 45.0% | |
| CTTATTTCGGTGAAGGGGAA+AGG | + | chr2_4:51936123-51936142 | Msa0333860:intron | 45.0% | |
| TATTTCGGTGAAGGGGAAAG+GGG | + | chr2_4:51936125-51936144 | Msa0333860:intron | 45.0% | |
| AAAGAACATCAAGTGGGAGG+GGG | + | chr2_4:51936233-51936252 | Msa0333860:intron | 45.0% | |
| GGTCCTAGAGAATGAGAAAG+AGG | + | chr2_4:51936270-51936289 | Msa0333860:intron | 45.0% | |
| TTAAAGGTCCTGTGGTTCAG+GGG | - | chr2_4:51936305-51936324 | None:intergenic | 45.0% | |
| ! | CTTTAAAGGTCCTGTGGTTC+AGG | - | chr2_4:51936307-51936326 | None:intergenic | 45.0% |
| ! | GAACCACAGGACCTTTAAAG+AGG | + | chr2_4:51936307-51936326 | Msa0333860:intron | 45.0% |
| ! | ACCACAGGACCTTTAAAGAG+GGG | + | chr2_4:51936309-51936328 | Msa0333860:intron | 45.0% |
| ! | AGGACCTTTAAAGAGGGGAA+GGG | + | chr2_4:51936314-51936333 | Msa0333860:intron | 45.0% |
| !! | CTTTGTTTCTCTGGGACCTT+TGG | + | chr2_4:51936350-51936369 | Msa0333860:intron | 45.0% |
| AGCATTCCCACTTATTGGGA+AGG | + | chr2_4:51936435-51936454 | Msa0333860:intron | 45.0% | |
| CAGGTGTGTTGCATACAGTA+TGG | - | chr2_4:51936656-51936675 | None:intergenic | 45.0% | |
| TACTGTATGCAACACACCTG+TGG | + | chr2_4:51936656-51936675 | Msa0333860:intron | 45.0% | |
| CTTTATTGACAGCTAGCCAC+TGG | + | chr2_4:51936761-51936780 | Msa0333860:intron | 45.0% | |
| TTATTGACAGCTAGCCACTG+GGG | + | chr2_4:51936763-51936782 | Msa0333860:intron | 45.0% | |
| !! | ATCAGTTATGGTGGTGGTGA+TGG | + | chr2_4:51936812-51936831 | Msa0333860:CDS | 45.0% |
| !! | GGTGATGGAGGTGATGATAA+TGG | + | chr2_4:51936827-51936846 | Msa0333860:CDS | 45.0% |
| AAAATGGCGGTCATTCCTTC+AGG | - | chr2_4:51937037-51937056 | None:intergenic | 45.0% | |
| !! | GCCATTTTGTCCTTGTGTTG+TGG | + | chr2_4:51937049-51937068 | Msa0333860:intron | 45.0% |
| GCCACAACACAAGGACAAAA+TGG | - | chr2_4:51937053-51937072 | None:intergenic | 45.0% | |
| CAAATAGCTGCCACAACACA+AGG | - | chr2_4:51937062-51937081 | None:intergenic | 45.0% | |
| ACTATCATGGATTTGCCTGC+TGG | + | chr2_4:51937123-51937142 | Msa0333860:CDS | 45.0% | |
| TGGATTTGCCTGCTGGATTT+CGG | + | chr2_4:51937130-51937149 | Msa0333860:CDS | 45.0% | |
| GAAATAAGCCTACTGGCAGT+TGG | - | chr2_4:51937298-51937317 | None:intergenic | 45.0% | |
| ! | TAGTCCTTGCGGTAGTTTTC+TGG | - | chr2_4:51937320-51937339 | None:intergenic | 45.0% |
| GATTCAGAAGCAAGGACATG+GGG | - | chr2_4:51937446-51937465 | None:intergenic | 45.0% | |
| CAGACCCTGCTTTCATGTAT+AGG | + | chr2_4:51937819-51937838 | Msa0333860:CDS | 45.0% | |
| TTAGAGCAAGTTGCTACGGT+AGG | + | chr2_4:51937848-51937867 | Msa0333860:CDS | 45.0% | |
| AACAACAACGGCATTGCATG+CGG | - | chr2_4:51938048-51938067 | None:intergenic | 45.0% | |
| ! | CATGCAATGCCGTTGTTGTT+TGG | + | chr2_4:51938048-51938067 | Msa0333860:CDS | 45.0% |
| AGCAAGGGACCAAACAACAA+CGG | - | chr2_4:51938060-51938079 | None:intergenic | 45.0% | |
| CATATGATCGACAAGGAGCA+AGG | - | chr2_4:51938076-51938095 | None:intergenic | 45.0% | |
| CTTGCTCCTTGTCGATCATA+TGG | + | chr2_4:51938074-51938093 | Msa0333860:CDS | 45.0% | |
| TGCAGGTCAAATTCCCTAAG+AGG | - | chr2_4:51938170-51938189 | None:intergenic | 45.0% | |
| GGGTGCATTGTCAAACACTT+TGG | + | chr2_4:51938262-51938281 | Msa0333860:CDS | 45.0% | |
| ! | AAAAAGGAAGGAAGGTGTGC+AGG | + | chr2_4:51938290-51938309 | Msa0333860:intron | 45.0% |
| ! | AAAAGGAAGGAAGGTGTGCA+GGG | + | chr2_4:51938291-51938310 | Msa0333860:intron | 45.0% |
| AGTGCATTACTGCTCACAGT+TGG | - | chr2_4:51938467-51938486 | None:intergenic | 45.0% | |
| ACTGTGAGCAGTAATGCACT+TGG | + | chr2_4:51938467-51938486 | Msa0333860:CDS | 45.0% | |
| AGCAGTAATGCACTTGGCTA+TGG | + | chr2_4:51938473-51938492 | Msa0333860:CDS | 45.0% | |
| ! | CTTGGCTATGGTGCTTTTCT+TGG | + | chr2_4:51938485-51938504 | Msa0333860:CDS | 45.0% |
| TGTTCTTCAGCACAGCATTC+AGG | + | chr2_4:51938591-51938610 | Msa0333860:CDS | 45.0% | |
| AGTTCATCTGACTGAGCTAG+TGG | - | chr2_4:51938959-51938978 | None:intergenic | 45.0% | |
| !! | AATGCAGTTGTTTCTGGGCT+TGG | + | chr2_4:51939049-51939068 | Msa0333860:CDS | 45.0% |
| GTCTCTTGGGCATCAAACAA+GGG | + | chr2_4:51939071-51939090 | Msa0333860:CDS | 45.0% | |
| GAAAAAGGTTGCTGCTGGAT+CGG | + | chr2_4:51939156-51939175 | Msa0333860:CDS | 45.0% | |
| TACTGCTGTATTGTCCTTGG+TGG | + | chr2_4:51939243-51939262 | Msa0333860:three_prime_UTR | 45.0% | |
| ! | GTATTGTCCTTGGTGGTTTC+TGG | + | chr2_4:51939250-51939269 | Msa0333860:three_prime_UTR | 45.0% |
| !! | TGGGTTGGTTGATCCCTCTA+TGG | + | chr2_4:51933912-51933931 | Msa0333860:five_prime_UTR | 50.0% |
| !! | GGGTTGGTTGATCCCTCTAT+GGG | + | chr2_4:51933913-51933932 | Msa0333860:five_prime_UTR | 50.0% |
| GAGACGACATCGTTTAGGGA+TGG | - | chr2_4:51934034-51934053 | None:intergenic | 50.0% | |
| GCGTGAGACGACATCGTTTA+GGG | - | chr2_4:51934038-51934057 | None:intergenic | 50.0% | |
| GGATGGATGAGTTCATTGGG+AGG | - | chr2_4:51934082-51934101 | None:intergenic | 50.0% | |
| ! | GGGAGTTTAGGGAAGGGTTT+TGG | - | chr2_4:51934122-51934141 | None:intergenic | 50.0% |
| AGGAGAGGGAGTTTAGGGAA+GGG | - | chr2_4:51934128-51934147 | None:intergenic | 50.0% | |
| TACGGAGGAGAGGGAGTTTA+GGG | - | chr2_4:51934133-51934152 | None:intergenic | 50.0% | |
| TTACGGAGGAGAGGGAGTTT+AGG | - | chr2_4:51934134-51934153 | None:intergenic | 50.0% | |
| ACGATCGGATAACAAGACGG+CGG | - | chr2_4:51934163-51934182 | None:intergenic | 50.0% | |
| AATATCGCTGTCGACATCGG+CGG | - | chr2_4:51934198-51934217 | None:intergenic | 50.0% | |
| GTCGACAGCGATATTTCCTC+CGG | + | chr2_4:51934203-51934222 | Msa0333860:CDS | 50.0% | |
| AAGTAACAAGTCTGCGCCTG+AGG | + | chr2_4:51934370-51934389 | Msa0333860:CDS | 50.0% | |
| CCGGTTTCGTGACATGAAAC+AGG | + | chr2_4:51935355-51935374 | Msa0333860:intron | 50.0% | |
| GGACACGTTATTGCTCATGC+AGG | - | chr2_4:51935675-51935694 | None:intergenic | 50.0% | |
| ! | TTGTGCAAAGTAGGTAGCGG+GGG | - | chr2_4:51935960-51935979 | None:intergenic | 50.0% |
| GTTGTGCAAAGTAGGTAGCG+GGG | - | chr2_4:51935961-51935980 | None:intergenic | 50.0% | |
| !! | CTGGTTGCGGTGCCTTATTT+CGG | + | chr2_4:51936110-51936129 | Msa0333860:intron | 50.0% |
| !! | CGGTGCCTTATTTCGGTGAA+GGG | + | chr2_4:51936117-51936136 | Msa0333860:intron | 50.0% |
| !! | GGTGCCTTATTTCGGTGAAG+GGG | + | chr2_4:51936118-51936137 | Msa0333860:intron | 50.0% |
| AAGGTGAGGAAGTCCCTGTT+AGG | + | chr2_4:51936189-51936208 | Msa0333860:intron | 50.0% | |
| AGGAATATCCCCTGAACCAC+AGG | + | chr2_4:51936294-51936313 | Msa0333860:intron | 50.0% | |
| ! | TCCCCTCTTTAAAGGTCCTG+TGG | - | chr2_4:51936313-51936332 | None:intergenic | 50.0% |
| ! | CAGGACCTTTAAAGAGGGGA+AGG | + | chr2_4:51936313-51936332 | Msa0333860:intron | 50.0% |
| ! | GGACCTTTAAAGAGGGGAAG+GGG | + | chr2_4:51936315-51936334 | Msa0333860:intron | 50.0% |
| CCAATGGTATGAGTAGCCAC+AGG | - | chr2_4:51936675-51936694 | None:intergenic | 50.0% | |
| CCTGTGGCTACTCATACCAT+TGG | + | chr2_4:51936672-51936691 | Msa0333860:intron | 50.0% | |
| TATTGACAGCTAGCCACTGG+GGG | + | chr2_4:51936764-51936783 | Msa0333860:intron | 50.0% | |
| !! | AGTTATGGTGGTGGTGATGG+AGG | + | chr2_4:51936815-51936834 | Msa0333860:CDS | 50.0% |
| ! | GATGGTGATGAGGGAGATGA+AGG | + | chr2_4:51936881-51936900 | Msa0333860:CDS | 50.0% |
| TAAGCTTGCCGAAATCCAGC+AGG | - | chr2_4:51937141-51937160 | None:intergenic | 50.0% | |
| ! | CTTGGTTAGCTCAGCCCAAA+TGG | + | chr2_4:51937246-51937265 | Msa0333860:CDS | 50.0% |
| ! | AGATTTTCCTCGGGGGACAA+TGG | - | chr2_4:51937528-51937547 | None:intergenic | 50.0% |
| !! | GTGCATGGTTGGTTTAAGCG+CGG | + | chr2_4:51938229-51938248 | Msa0333860:CDS | 50.0% |
| !! | TGCATGGTTGGTTTAAGCGC+GGG | + | chr2_4:51938230-51938249 | Msa0333860:CDS | 50.0% |
| !! | TGTTTCTGGGCTTGGTCTCT+TGG | + | chr2_4:51939057-51939076 | Msa0333860:CDS | 50.0% |
| ! | GTTTCTGGGCTTGGTCTCTT+GGG | + | chr2_4:51939058-51939077 | Msa0333860:CDS | 50.0% |
| GGTCTCTTGGGCATCAAACA+AGG | + | chr2_4:51939070-51939089 | Msa0333860:CDS | 50.0% | |
| CAAGGGAATGCAGATGTGTC+TGG | + | chr2_4:51939088-51939107 | Msa0333860:CDS | 50.0% | |
| CTCCCAAAGCTCGTCGAAAA+AGG | + | chr2_4:51939125-51939144 | Msa0333860:CDS | 50.0% | |
| GTACGGAAAAAGGTTGCTGC+TGG | + | chr2_4:51939151-51939170 | Msa0333860:CDS | 50.0% | |
| CTGGATCGGCCTAGATTCTT+CGG | + | chr2_4:51939170-51939189 | Msa0333860:exon | 50.0% | |
| CGCGTGAGACGACATCGTTT+AGG | - | chr2_4:51934039-51934058 | None:intergenic | 55.0% | |
| GAGGAGAGGGAGTTTAGGGA+AGG | - | chr2_4:51934129-51934148 | None:intergenic | 55.0% | |
| GGATAACAAGACGGCGGTGA+CGG | - | chr2_4:51934157-51934176 | None:intergenic | 55.0% | |
| ! | GCCGTCTTGTTATCCGATCG+TGG | + | chr2_4:51934162-51934181 | Msa0333860:CDS | 55.0% |
| ATATCGCTGTCGACATCGGC+GGG | - | chr2_4:51934197-51934216 | None:intergenic | 55.0% | |
| GAAACACCGTTCAAGCAGCG+AGG | - | chr2_4:51934231-51934250 | None:intergenic | 55.0% | |
| TGAACGGTGTTTCGCTGCTC+CGG | + | chr2_4:51934238-51934257 | Msa0333860:CDS | 55.0% | |
| ATGTTACCGGAAGCGGAAGG+AGG | - | chr2_4:51934269-51934288 | None:intergenic | 55.0% | |
| ! | TGTGCCGGTGCTTCACAGAA+AGG | - | chr2_4:51934799-51934818 | None:intergenic | 55.0% |
| GAACCGCAAACTGCCATGCA+TGG | - | chr2_4:51936007-51936026 | None:intergenic | 55.0% | |
| AGGAGCTCAGCTCACAGTTG+TGG | - | chr2_4:51936078-51936097 | None:intergenic | 55.0% | |
| !! | GCGGTGCCTTATTTCGGTGA+AGG | + | chr2_4:51936116-51936135 | Msa0333860:intron | 55.0% |
| CCTCCCCTTCCCCTCTTTAA+AGG | - | chr2_4:51936321-51936340 | None:intergenic | 55.0% | |
| ! | CCTTTAAAGAGGGGAAGGGG+AGG | + | chr2_4:51936318-51936337 | Msa0333860:intron | 55.0% |
| ATTGACAGCTAGCCACTGGG+GGG | + | chr2_4:51936765-51936784 | Msa0333860:intron | 55.0% | |
| GGTGATGAGGGAGATGAAGG+TGG | + | chr2_4:51936884-51936903 | Msa0333860:CDS | 55.0% | |
| CAAGGCTGCTGAGTTGTGCA+TGG | + | chr2_4:51938214-51938233 | Msa0333860:CDS | 55.0% | |
| GCTGCTGAGTTGTGCATGGT+TGG | + | chr2_4:51938218-51938237 | Msa0333860:CDS | 55.0% | |
| TTTAAGCGCGGGTGCAGTAC+AGG | + | chr2_4:51938241-51938260 | Msa0333860:CDS | 55.0% | |
| TTAAGCGCGGGTGCAGTACA+GGG | + | chr2_4:51938242-51938261 | Msa0333860:CDS | 55.0% | |
| GAGAGACTTCCAAACGTGCC+TGG | + | chr2_4:51938915-51938934 | Msa0333860:CDS | 55.0% | |
| ACTTCCAAACGTGCCTGGCT+TGG | + | chr2_4:51938920-51938939 | Msa0333860:CDS | 55.0% | |
| AACTCCAAGCCAGGCACGTT+TGG | - | chr2_4:51938927-51938946 | None:intergenic | 55.0% | |
| ATCTGCCTCAACTCCAAGCC+AGG | - | chr2_4:51938936-51938955 | None:intergenic | 55.0% | |
| !! | TGGTTTCTGGCTGCTGCTCT+AGG | + | chr2_4:51939263-51939282 | Msa0333860:three_prime_UTR | 55.0% |
| !! | TTTCTGGCTGCTGCTCTAGG+AGG | + | chr2_4:51939266-51939285 | Msa0333860:three_prime_UTR | 55.0% |
| !! | TTCTGGCTGCTGCTCTAGGA+GGG | + | chr2_4:51939267-51939286 | Msa0333860:three_prime_UTR | 55.0% |
| ! | GGTGACGGTTACGGAGGAGA+GGG | - | chr2_4:51934142-51934161 | None:intergenic | 60.0% |
| ! | CAAGACGGCGGTGACGGTTA+CGG | - | chr2_4:51934151-51934170 | None:intergenic | 60.0% |
| TTCAAGCAGCGAGGAACCGG+AGG | - | chr2_4:51934222-51934241 | None:intergenic | 60.0% | |
| CCGTTCAAGCAGCGAGGAAC+CGG | - | chr2_4:51934225-51934244 | None:intergenic | 60.0% | |
| CCGGTTCCTCGCTGCTTGAA+CGG | + | chr2_4:51934222-51934241 | Msa0333860:CDS | 60.0% | |
| GGGCCATGCATGGCAGTTTG+CGG | + | chr2_4:51936001-51936020 | Msa0333860:intron | 60.0% | |
| TCGGTGAAGGGGAAAGGGGT+AGG | + | chr2_4:51936129-51936148 | Msa0333860:intron | 60.0% | |
| CGGTGAAGGGGAAAGGGGTA+GGG | + | chr2_4:51936130-51936149 | Msa0333860:intron | 60.0% | |
| GGTGAAGGGGAAAGGGGTAG+GGG | + | chr2_4:51936131-51936150 | Msa0333860:intron | 60.0% | |
| ACATCAAGTGGGAGGGGGAG+AGG | + | chr2_4:51936238-51936257 | Msa0333860:intron | 60.0% | |
| TGGGAGGGGGAGAGGAAAGA+GGG | + | chr2_4:51936246-51936265 | Msa0333860:intron | 60.0% | |
| ! | TCTGGGACCTTTGGCACCAG+AGG | + | chr2_4:51936359-51936378 | Msa0333860:intron | 60.0% |
| TTGACAGCTAGCCACTGGGG+GGG | + | chr2_4:51936766-51936785 | Msa0333860:intron | 60.0% | |
| ATGCCAGGCCAACTGCCAGT+AGG | + | chr2_4:51937287-51937306 | Msa0333860:CDS | 60.0% | |
| AAGCCTACTGGCAGTTGGCC+TGG | - | chr2_4:51937293-51937312 | None:intergenic | 60.0% | |
| CTACGGTAGGCTGCTCTGTG+TGG | + | chr2_4:51937861-51937880 | Msa0333860:CDS | 60.0% | |
| GGTAGGCTGCTCTGTGTGGT+GGG | + | chr2_4:51937865-51937884 | Msa0333860:CDS | 60.0% | |
| CATTGCATGCGGCTGCAGTG+AGG | - | chr2_4:51938037-51938056 | None:intergenic | 60.0% | |
| !! | ACGTGCCTGGCTTGGAGTTG+AGG | + | chr2_4:51938928-51938947 | Msa0333860:CDS | 60.0% |
| GCAGCAGCCAGAAACCACCA+AGG | - | chr2_4:51939260-51939279 | None:intergenic | 60.0% | |
| !! | TCTGGCTGCTGCTCTAGGAG+GGG | + | chr2_4:51939268-51939287 | Msa0333860:three_prime_UTR | 60.0% |
| ! | CGGTGACGGTTACGGAGGAG+AGG | - | chr2_4:51934143-51934162 | None:intergenic | 65.0% |
| CGGGAGAAGCGGACCACGAT+CGG | - | chr2_4:51934178-51934197 | None:intergenic | 65.0% | |
| GTCGACATCGGCGGGAGAAG+CGG | - | chr2_4:51934189-51934208 | None:intergenic | 65.0% | |
| GCGGGGGCAGGACACTAAGA+AGG | - | chr2_4:51935944-51935963 | None:intergenic | 65.0% | |
| !! | GCAAAGTAGGTAGCGGGGGC+AGG | - | chr2_4:51935956-51935975 | None:intergenic | 65.0% |
| AGGGGAAAGGGGTAGGGGAG+AGG | + | chr2_4:51936136-51936155 | Msa0333860:intron | 65.0% | |
| GTGGGAGGGGGAGAGGAAAG+AGG | + | chr2_4:51936245-51936264 | Msa0333860:intron | 65.0% | |
| GAGGGGGAGAGGAAAGAGGG+AGG | + | chr2_4:51936249-51936268 | Msa0333860:intron | 65.0% | |
| TGACAGCTAGCCACTGGGGG+GGG | + | chr2_4:51936767-51936786 | Msa0333860:intron | 65.0% | |
| !! | GGGGGGGGTGGTGGAGATAT+TGG | + | chr2_4:51936782-51936801 | Msa0333860:CDS | 65.0% |
| GAGAGGACCATTGTCCCCCG+AGG | + | chr2_4:51937518-51937537 | Msa0333860:intron | 65.0% | |
| CGGTAGGCTGCTCTGTGTGG+TGG | + | chr2_4:51937864-51937883 | Msa0333860:CDS | 65.0% | |
| ! | GACGGCGGTGACGGTTACGG+AGG | - | chr2_4:51934148-51934167 | None:intergenic | 70.0% |
| ACCGGAAGCGGAAGGAGGCG+CGG | - | chr2_4:51934264-51934283 | None:intergenic | 70.0% | |
| ATCTCCACCACCCCCCCCAG+TGG | - | chr2_4:51936780-51936799 | None:intergenic | 70.0% | |
| ! | GAAGCGGAAGGAGGCGCGGC+CGG | - | chr2_4:51934260-51934279 | None:intergenic | 75.0% |
| GCCGCGCCTCCTTCCGCTTC+CGG | + | chr2_4:51934260-51934279 | Msa0333860:CDS | 75.0% | |
| CAGCTAGCCACTGGGGGGGG+TGG | + | chr2_4:51936770-51936789 | Msa0333860:intron | 75.0% | |
| CTAGCCACTGGGGGGGGTGG+TGG | + | chr2_4:51936773-51936792 | Msa0333860:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 51933895 | 51939453 | 51933895 | ID=Msa0333860;Name=Msa0333860 |
| chr2_4 | mRNA | 51933895 | 51939453 | 51933895 | ID=Msa0333860-mRNA-1;Parent=Msa0333860;Name=Msa0333860-mRNA-1;_AED=0.08;_eAED=0.08;_QI=149|1|1|1|1|1|8|270|526 |
| chr2_4 | exon | 51933895 | 51934391 | 51933895 | ID=Msa0333860-mRNA-1:exon:15587;Parent=Msa0333860-mRNA-1 |
| chr2_4 | exon | 51936773 | 51936937 | 51936773 | ID=Msa0333860-mRNA-1:exon:15588;Parent=Msa0333860-mRNA-1 |
| chr2_4 | exon | 51937075 | 51937167 | 51937075 | ID=Msa0333860-mRNA-1:exon:15589;Parent=Msa0333860-mRNA-1 |
| chr2_4 | exon | 51937244 | 51937359 | 51937244 | ID=Msa0333860-mRNA-1:exon:15590;Parent=Msa0333860-mRNA-1 |
| chr2_4 | exon | 51937811 | 51937909 | 51937811 | ID=Msa0333860-mRNA-1:exon:15591;Parent=Msa0333860-mRNA-1 |
| chr2_4 | exon | 51937998 | 51938303 | 51937998 | ID=Msa0333860-mRNA-1:exon:15592;Parent=Msa0333860-mRNA-1 |
| chr2_4 | exon | 51938448 | 51938612 | 51938448 | ID=Msa0333860-mRNA-1:exon:15593;Parent=Msa0333860-mRNA-1 |
| chr2_4 | exon | 51938895 | 51939453 | 51938895 | ID=Msa0333860-mRNA-1:exon:15594;Parent=Msa0333860-mRNA-1 |
| chr2_4 | five_prime_UTR | 51933895 | 51934043 | 51933895 | ID=Msa0333860-mRNA-1:five_prime_utr;Parent=Msa0333860-mRNA-1 |
| chr2_4 | CDS | 51934044 | 51934391 | 51934044 | ID=Msa0333860-mRNA-1:cds;Parent=Msa0333860-mRNA-1 |
| chr2_4 | CDS | 51936773 | 51936937 | 51936773 | ID=Msa0333860-mRNA-1:cds;Parent=Msa0333860-mRNA-1 |
| chr2_4 | CDS | 51937075 | 51937167 | 51937075 | ID=Msa0333860-mRNA-1:cds;Parent=Msa0333860-mRNA-1 |
| chr2_4 | CDS | 51937244 | 51937359 | 51937244 | ID=Msa0333860-mRNA-1:cds;Parent=Msa0333860-mRNA-1 |
| chr2_4 | CDS | 51937811 | 51937909 | 51937811 | ID=Msa0333860-mRNA-1:cds;Parent=Msa0333860-mRNA-1 |
| chr2_4 | CDS | 51937998 | 51938303 | 51937998 | ID=Msa0333860-mRNA-1:cds;Parent=Msa0333860-mRNA-1 |
| chr2_4 | CDS | 51938448 | 51938612 | 51938448 | ID=Msa0333860-mRNA-1:cds;Parent=Msa0333860-mRNA-1 |
| chr2_4 | CDS | 51938895 | 51939183 | 51938895 | ID=Msa0333860-mRNA-1:cds;Parent=Msa0333860-mRNA-1 |
| chr2_4 | three_prime_UTR | 51939184 | 51939453 | 51939184 | ID=Msa0333860-mRNA-1:three_prime_utr;Parent=Msa0333860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
