Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216840 | XP_003596481.1 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216840 | sp|Q8RWG3|RER6_ARATH | 26.168 | 321 | 207 | 9 | 173 | 474 | 418 | 727 | 3.00e-17 | 89.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216840 | G7IR51 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1063 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0216840 | Msa0333860 | 0.847479 | 1.127150e-59 | -8.615850e-47 |
| Msa0216840 | Msa0799970 | -0.800149 | 1.649966e-48 | -8.615850e-47 |
| Msa0216840 | Msa1232700 | -0.808294 | 3.323552e-50 | -8.615850e-47 |
| Msa0216840 | Msa1363820 | 0.800942 | 1.137616e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216840 | MtrunA17_Chr2g0318431 | 99.049 | 526 | 5 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1063 |
| Msa0216840 | MtrunA17_Chr7g0240091 | 29.680 | 219 | 138 | 5 | 241 | 445 | 225 | 441 | 2.89e-18 | 87.4 |
| Msa0216840 | MtrunA17_Chr3g0114241 | 28.287 | 251 | 159 | 6 | 173 | 408 | 426 | 670 | 5.53e-17 | 84.3 |
| Msa0216840 | MtrunA17_Chr2g0320711 | 21.992 | 241 | 174 | 3 | 179 | 410 | 155 | 390 | 3.62e-13 | 71.6 |
| Msa0216840 | MtrunA17_Chr3g0090071 | 26.554 | 177 | 124 | 2 | 238 | 408 | 164 | 340 | 4.12e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216840 | AT5G24690.1 | 66.729 | 538 | 147 | 10 | 3 | 526 | 2 | 521 | 0.0 | 617 |
| Msa0216840 | AT3G56140.2 | 25.392 | 319 | 212 | 7 | 173 | 474 | 199 | 508 | 1.22e-18 | 89.4 |
| Msa0216840 | AT3G56140.1 | 26.168 | 321 | 207 | 9 | 173 | 474 | 418 | 727 | 3.05e-18 | 89.0 |
| Msa0216840 | AT3G56140.3 | 26.168 | 321 | 207 | 9 | 173 | 474 | 418 | 727 | 3.05e-18 | 89.0 |
| Msa0216840 | AT2G40400.2 | 25.692 | 253 | 165 | 4 | 173 | 409 | 409 | 654 | 2.39e-17 | 85.9 |
| Msa0216840 | AT2G40400.1 | 25.692 | 253 | 165 | 4 | 173 | 409 | 409 | 654 | 2.39e-17 | 85.9 |
| Msa0216840 | AT2G40400.3 | 25.703 | 249 | 162 | 4 | 173 | 405 | 409 | 650 | 3.38e-16 | 82.0 |
| Msa0216840 | AT5G22790.1 | 28.019 | 207 | 136 | 5 | 241 | 434 | 209 | 415 | 9.56e-16 | 80.1 |
| Msa0216840 | AT2G37860.3 | 27.222 | 180 | 122 | 2 | 241 | 411 | 209 | 388 | 5.97e-15 | 77.4 |
| Msa0216840 | AT2G37860.4 | 27.222 | 180 | 122 | 2 | 241 | 411 | 209 | 388 | 5.97e-15 | 77.4 |
Find 168 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTGTCCTTGGTGGTTTC+TGG | 0.099632 | 2_1:-63014189 | Msa0216840:three_prime_UTR |
| TCAAAGAATGCAGTTGTTTC+TGG | 0.145362 | 2_1:-63014396 | Msa0216840:CDS |
| TTGAAATGAGCTATCCTCTT+AGG | 0.209103 | 2_1:-63015285 | Msa0216840:CDS |
| GTTCGTCAGTTTGATGTTAT+TGG | 0.210309 | 2_1:-63014879 | Msa0216840:CDS |
| TGTTTCTGGGCTTGGTCTCT+TGG | 0.267949 | 2_1:-63014382 | Msa0216840:CDS |
| TGGGTTGGTTGATCCCTCTA+TGG | 0.281280 | 2_1:-63019548 | Msa0216840:five_prime_UTR |
| CTCCCAAAGCTCGTCGAAAA+AGG | 0.281953 | 2_1:-63014314 | Msa0216840:CDS |
| TTGCTAAGAATTTCACCATT+TGG | 0.287583 | 2_1:+63016177 | None:intergenic |
| AAACACTTTGGCTAAGAAAA+AGG | 0.291899 | 2_1:-63015164 | Msa0216840:CDS |
| GGGAGTTTAGGGAAGGGTTT+TGG | 0.293170 | 2_1:+63019341 | None:intergenic |
| GCCGCGCCTCCTTCCGCTTC+CGG | 0.298518 | 2_1:-63019200 | Msa0216840:CDS |
| TACGGAGGAGAGGGAGTTTA+GGG | 0.300913 | 2_1:+63019330 | None:intergenic |
| TGCTAAGAATTTCACCATTT+GGG | 0.301877 | 2_1:+63016178 | None:intergenic |
| TTACGGAGGAGAGGGAGTTT+AGG | 0.308680 | 2_1:+63019329 | None:intergenic |
| CAGACCCTGCTTTCATGTAT+AGG | 0.316471 | 2_1:-63015619 | Msa0216840:CDS |
| CTCATTTCAAATATGTTGTT+TGG | 0.318442 | 2_1:+63015298 | None:intergenic |
| AACTCCAAGCCAGGCACGTT+TGG | 0.323970 | 2_1:+63014515 | None:intergenic |
| GCAAAATAGAGAAGTCTCTT+TGG | 0.324116 | 2_1:-63019574 | None:intergenic |
| CATGCAATGCCGTTGTTGTT+TGG | 0.334037 | 2_1:-63015390 | Msa0216840:CDS |
| TGGATTTGCCCGCTGGATTT+CGG | 0.337438 | 2_1:-63016308 | Msa0216840:CDS |
| ACACAGCATCCACAAATTTA+CGG | 0.348932 | 2_1:+63016355 | None:intergenic |
| TGTTCTTCAGCACAGCATTC+AGG | 0.350694 | 2_1:-63014848 | Msa0216840:intron |
| GAAGGGATGGATGAGTTCAT+TGG | 0.350804 | 2_1:+63019377 | None:intergenic |
| AATGCAGTTGTTTCTGGGCT+TGG | 0.351608 | 2_1:-63014390 | Msa0216840:CDS |
| GTTTCTGGGCTTGGTCTCTT+GGG | 0.363561 | 2_1:-63014381 | Msa0216840:CDS |
| CAGGGTGTTAAACGTTCAAC+TGG | 0.367842 | 2_1:-63014547 | Msa0216840:CDS |
| CAAAATAGAGAAGTCTCTTT+GGG | 0.370205 | 2_1:-63019573 | None:intergenic |
| AGAGAAGTCTCTTTGGGATT+GGG | 0.378430 | 2_1:-63019567 | Msa0216840:five_prime_UTR |
| TAGAGAAGTCTCTTTGGGAT+TGG | 0.390738 | 2_1:-63019568 | Msa0216840:five_prime_UTR |
| CCGTATTTACCTTTCATAAC+CGG | 0.395087 | 2_1:+63019167 | None:intergenic |
| CCGTTCAAGCAGCGAGGAAC+CGG | 0.396666 | 2_1:+63019238 | None:intergenic |
| AACAACCATCATCCTCAAAA+TGG | 0.398226 | 2_1:-63014425 | Msa0216840:CDS |
| CAAAGAATGCAGTTGTTTCT+GGG | 0.400070 | 2_1:-63014395 | Msa0216840:CDS |
| GAAGCGGAAGGAGGCGCGGC+CGG | 0.402187 | 2_1:+63019203 | None:intergenic |
| TTTAAGCGCGGGTGCAGTAC+AGG | 0.403623 | 2_1:-63015197 | Msa0216840:CDS |
| GCGTGAGACGACATCGTTTA+GGG | 0.407867 | 2_1:+63019425 | None:intergenic |
| AACTCTTGAAAGTTTACAAC+AGG | 0.411065 | 2_1:-63014464 | Msa0216840:CDS |
| CATAACCGGATTAATGTTAC+CGG | 0.413040 | 2_1:+63019181 | None:intergenic |
| GAAGTATGCGTCTTCTAAAC+AGG | 0.414202 | 2_1:+63016532 | None:intergenic |
| TGAAATGAGCTATCCTCTTA+GGG | 0.414318 | 2_1:-63015284 | Msa0216840:CDS |
| AAATTCAGTAATAATATTGT+AGG | 0.416783 | 2_1:+63014113 | None:intergenic |
| CTTGCTCCTTGTCGATCATA+TGG | 0.419050 | 2_1:-63015364 | Msa0216840:CDS |
| CGCGTGAGACGACATCGTTT+AGG | 0.420756 | 2_1:+63019424 | None:intergenic |
| TTCTGGCTGCTGCTCTAGGA+GGG | 0.421378 | 2_1:-63014172 | Msa0216840:three_prime_UTR |
| ATTGTTGAGAGTGGAGAGGA+AGG | 0.425313 | 2_1:+63019511 | None:intergenic |
| TGGTTTCTGGCTGCTGCTCT+AGG | 0.435012 | 2_1:-63014176 | Msa0216840:three_prime_UTR |
| CAGGATCGGCCTAGATTCTT+CGG | 0.435315 | 2_1:-63014269 | Msa0216840:exon |
| GCTATTTGACCGTAAATTTG+TGG | 0.435761 | 2_1:-63016364 | Msa0216840:CDS |
| CGCTTCCGGTAACATTAATC+CGG | 0.439389 | 2_1:-63019186 | Msa0216840:CDS |
| AAGCCTACTGGCAGTTGGCC+TGG | 0.440504 | 2_1:+63016148 | None:intergenic |
| TGATACTGCTGTATTGTCCT+TGG | 0.440868 | 2_1:-63014199 | Msa0216840:three_prime_UTR |
| AAAGGTAAATACGGTGCGTT+TGG | 0.441403 | 2_1:-63019158 | Msa0216840:CDS |
| CCGGTTCCTCGCTGCTTGAA+CGG | 0.442423 | 2_1:-63019238 | Msa0216840:CDS |
| TACTTTGATGACTTTGATGA+TGG | 0.442659 | 2_1:-63016576 | Msa0216840:CDS |
| TGTTTACATCCGAAGAATCT+AGG | 0.443496 | 2_1:+63014260 | None:intergenic |
| ACTTCCAAACGTGCCTGGCT+TGG | 0.443805 | 2_1:-63014519 | Msa0216840:CDS |
| AGTAATAATATTGTAGGTGA+TGG | 0.444728 | 2_1:+63014119 | None:intergenic |
| ACTATCATGGATTTGCCCGC+TGG | 0.445111 | 2_1:-63016315 | Msa0216840:CDS |
| TATCAAGATCTTTCATTGGC+AGG | 0.445171 | 2_1:-63016100 | Msa0216840:intron |
| TGCAGGTCAAATTCCCTAAG+AGG | 0.447055 | 2_1:+63015271 | None:intergenic |
| GGACTATCAAGATCTTTCAT+TGG | 0.448462 | 2_1:-63016104 | Msa0216840:CDS |
| CTTGGTTAGCTCAGCCCAAA+TGG | 0.451387 | 2_1:-63016192 | Msa0216840:CDS |
| CTTTATTGACAGCTAGCCAC+TGG | 0.453175 | 2_1:-63016678 | Msa0216840:intron |
| AAGGGATGGATGAGTTCATT+GGG | 0.454914 | 2_1:+63019378 | None:intergenic |
| TACTGCTGTATTGTCCTTGG+TGG | 0.459021 | 2_1:-63014196 | Msa0216840:three_prime_UTR |
| AGTTTACAAATCGGAAAGAT+AGG | 0.464129 | 2_1:-63015550 | Msa0216840:intron |
| GAGAGGAAGGAGAAGAAGAT+AGG | 0.464856 | 2_1:+63019524 | None:intergenic |
| ATCAGTTATGGTGGTGGTGA+TGG | 0.468563 | 2_1:-63016627 | Msa0216840:CDS |
| GGGTTGGTTGATCCCTCTAT+GGG | 0.472792 | 2_1:-63019547 | Msa0216840:five_prime_UTR |
| CAAGACGGCGGTGACGGTTA+CGG | 0.473141 | 2_1:+63019312 | None:intergenic |
| CGGATTAATGTTACCGGAAG+CGG | 0.473328 | 2_1:+63019187 | None:intergenic |
| CACATAGCAGTTGATATCTC+AGG | 0.479279 | 2_1:+63014919 | None:intergenic |
| GTAATAATATTGTAGGTGAT+GGG | 0.482515 | 2_1:+63014120 | None:intergenic |
| TGAACGGTGTTTCGCTGCTC+CGG | 0.487700 | 2_1:-63019222 | Msa0216840:CDS |
| ATCTGCCTCAACTCCAAGCC+AGG | 0.489398 | 2_1:+63014506 | None:intergenic |
| GAGAGACTTCCAAACGTGCC+TGG | 0.493581 | 2_1:-63014524 | Msa0216840:CDS |
| AGAAACCTATACATGAAAGC+AGG | 0.495167 | 2_1:+63015614 | None:intergenic |
| CGGTAGGCTGCTCTGTGTGG+TGG | 0.496241 | 2_1:-63015574 | Msa0216840:CDS |
| CCGGTTATGAAAGGTAAATA+CGG | 0.497596 | 2_1:-63019167 | Msa0216840:CDS |
| GGTGATGGAGGTGATGATAA+TGG | 0.499387 | 2_1:-63016612 | Msa0216840:CDS |
| CTGCTATGTGGATTTGATAG+AGG | 0.504429 | 2_1:-63014906 | Msa0216840:CDS |
| ATTTCGGCAAGCTTATGAAA+TGG | 0.506671 | 2_1:-63016292 | Msa0216840:intron |
| CGGGAGAAGCGGACCACGAT+CGG | 0.509858 | 2_1:+63019285 | None:intergenic |
| GCTGCTGAGTTGTGCATGGT+TGG | 0.511086 | 2_1:-63015220 | Msa0216840:CDS |
| GGTCTCTTGGGCATCAAACA+AGG | 0.512113 | 2_1:-63014369 | Msa0216840:CDS |
| GAGGAGAGGGAGTTTAGGGA+AGG | 0.512666 | 2_1:+63019334 | None:intergenic |
| ATATCGCTGTCGACATCGGC+GGG | 0.513440 | 2_1:+63019266 | None:intergenic |
| TGGATGCTGTGTTGAATGAA+TGG | 0.518394 | 2_1:-63016344 | Msa0216840:CDS |
| ATTGGAAAGATAATCAGTTA+TGG | 0.523781 | 2_1:-63016639 | Msa0216840:CDS |
| TTTCTGGCTGCTGCTCTAGG+AGG | 0.530235 | 2_1:-63014173 | Msa0216840:three_prime_UTR |
| AAGTCTCTTTGGGATTGGGT+TGG | 0.530290 | 2_1:-63019563 | Msa0216840:five_prime_UTR |
| AACATTAATCCGGTTATGAA+AGG | 0.530557 | 2_1:-63019176 | Msa0216840:CDS |
| CAAGGGAATGCAGATGTGTC+TGG | 0.532654 | 2_1:-63014351 | Msa0216840:CDS |
| GACTTTGATGATGGTGATGA+GGG | 0.532919 | 2_1:-63016567 | Msa0216840:CDS |
| AGGAGAGGGAGTTTAGGGAA+GGG | 0.533110 | 2_1:+63019335 | None:intergenic |
| TCTGGCTGCTGCTCTAGGAG+GGG | 0.534093 | 2_1:-63014171 | Msa0216840:three_prime_UTR |
| GATGGTGATGAGGGAGATGA+AGG | 0.535109 | 2_1:-63016558 | Msa0216840:CDS |
| GTCGACAGCGATATTTCCTC+CGG | 0.540129 | 2_1:-63019257 | Msa0216840:CDS |
| ACGTGCCTGGCTTGGAGTTG+AGG | 0.540692 | 2_1:-63014511 | Msa0216840:CDS |
| GAAATAAGCCTACTGGCAGT+TGG | 0.543973 | 2_1:+63016143 | None:intergenic |
| GTCGACATCGGCGGGAGAAG+CGG | 0.545373 | 2_1:+63019274 | None:intergenic |
| AAGACGCATACTTCTTCAAG+AGG | 0.549712 | 2_1:-63016523 | Msa0216840:intron |
| CTTCGATTTCTCGAGCGTAA+CGG | 0.550925 | 2_1:+63019133 | None:intergenic |
| AGCAGTAATGCACTTGGCTA+TGG | 0.551775 | 2_1:-63014966 | Msa0216840:CDS |
| GGTAGGCTGCTCTGTGTGGT+GGG | 0.552612 | 2_1:-63015573 | Msa0216840:CDS |
| TTTATTGACAGCTAGCCACT+GGG | 0.553801 | 2_1:-63016677 | Msa0216840:intron |
| GGAAATATCGCTGTCGACAT+CGG | 0.555376 | 2_1:+63019262 | None:intergenic |
| AGTTCATCTGACTGAGCTAG+TGG | 0.556219 | 2_1:+63014483 | None:intergenic |
| TGCATGGTTGGTTTAAGCGC+GGG | 0.557360 | 2_1:-63015208 | Msa0216840:CDS |
| GGGTGCATTGTCAAACACTT+TGG | 0.559747 | 2_1:-63015176 | Msa0216840:CDS |
| GGATAACAAGACGGCGGTGA+CGG | 0.559797 | 2_1:+63019306 | None:intergenic |
| TTAAGCGCGGGTGCAGTACA+GGG | 0.561396 | 2_1:-63015196 | Msa0216840:CDS |
| AATTCTTAGCAATGAATGCC+AGG | 0.562493 | 2_1:-63016166 | Msa0216840:CDS |
| CTGAGATATCAACTGCTATG+TGG | 0.569147 | 2_1:-63014918 | Msa0216840:CDS |
| TCTATTAGAGCAAGTTGCTA+CGG | 0.569531 | 2_1:-63015594 | Msa0216840:CDS |
| CAAGGCTGCTGAGTTGTGCA+TGG | 0.572049 | 2_1:-63015224 | Msa0216840:CDS |
| TGAATGGCAAAGGACTATCA+TGG | 0.572451 | 2_1:-63016328 | Msa0216840:CDS |
| CATATGATCGACAAGGAGCA+AGG | 0.573804 | 2_1:+63015365 | None:intergenic |
| AAGAACTGAATTGTTGAGAG+TGG | 0.574354 | 2_1:+63019502 | None:intergenic |
| GGTGACGGTTACGGAGGAGA+GGG | 0.577402 | 2_1:+63019321 | None:intergenic |
| CTGAATTGTTGAGAGTGGAG+AGG | 0.579781 | 2_1:+63019507 | None:intergenic |
| ACCGGAAGCGGAAGGAGGCG+CGG | 0.580831 | 2_1:+63019199 | None:intergenic |
| TGTGGTGGGAGTTTACAAAT+CGG | 0.581274 | 2_1:-63015559 | Msa0216840:CDS |
| TGACTTTGATGATGGTGATG+AGG | 0.586108 | 2_1:-63016568 | Msa0216840:CDS |
| GGAAAGATAATCAGTTATGG+TGG | 0.588023 | 2_1:-63016636 | Msa0216840:CDS |
| GGATGGATGAGTTCATTGGG+AGG | 0.588310 | 2_1:+63019381 | None:intergenic |
| TAAGCTTGCCGAAATCCAGC+GGG | 0.593555 | 2_1:+63016300 | None:intergenic |
| AGTTATGGTGGTGGTGATGG+AGG | 0.594111 | 2_1:-63016624 | Msa0216840:CDS |
| AGAAGAAGATAGGCCCATAG+AGG | 0.594653 | 2_1:+63019534 | None:intergenic |
| CGGTGACGGTTACGGAGGAG+AGG | 0.603340 | 2_1:+63019320 | None:intergenic |
| AGTGCATTACTGCTCACAGT+TGG | 0.605764 | 2_1:+63014975 | None:intergenic |
| GAAACCTATACATGAAAGCA+GGG | 0.605957 | 2_1:+63015615 | None:intergenic |
| GTCTCTTGGGCATCAAACAA+GGG | 0.607736 | 2_1:-63014368 | Msa0216840:CDS |
| TTAGAGCAAGTTGCTACGGT+AGG | 0.608583 | 2_1:-63015590 | Msa0216840:CDS |
| AAGTAACAAGTCTGCGCCTG+AGG | 0.609651 | 2_1:-63019090 | Msa0216840:intron |
| GAAGAAGATAGGCCCATAGA+GGG | 0.609825 | 2_1:+63019535 | None:intergenic |
| GAGACGACATCGTTTAGGGA+TGG | 0.621378 | 2_1:+63019429 | None:intergenic |
| TTCAAGCAGCGAGGAACCGG+AGG | 0.621943 | 2_1:+63019241 | None:intergenic |
| AATATCGCTGTCGACATCGG+CGG | 0.624159 | 2_1:+63019265 | None:intergenic |
| CTACGGTAGGCTGCTCTGTG+TGG | 0.624582 | 2_1:-63015577 | Msa0216840:CDS |
| TAATAATATTGTAGGTGATG+GGG | 0.630018 | 2_1:+63014121 | None:intergenic |
| ATGTTACCGGAAGCGGAAGG+AGG | 0.631148 | 2_1:+63019194 | None:intergenic |
| CTGTGTTGAATGAATGGCAA+AGG | 0.635333 | 2_1:-63016338 | Msa0216840:CDS |
| ATGTGGATTTGATAGAGGAA+TGG | 0.635556 | 2_1:-63014901 | Msa0216840:CDS |
| AAGATAATCAGTTATGGTGG+TGG | 0.635917 | 2_1:-63016633 | Msa0216840:CDS |
| TATTGACAGCTAGCCACTGG+GGG | 0.638060 | 2_1:-63016675 | Msa0216840:intron |
| ATTACTGCTCACAGTTGGAA+CGG | 0.641868 | 2_1:+63014980 | None:intergenic |
| ATAAGCTTGCCGAAATCCAG+CGG | 0.642824 | 2_1:+63016299 | None:intergenic |
| GACGGCGGTGACGGTTACGG+AGG | 0.646221 | 2_1:+63019315 | None:intergenic |
| ATATGATCGACAAGGAGCAA+GGG | 0.646370 | 2_1:+63015366 | None:intergenic |
| ATTTCCAGAAAACTACCGCA+AGG | 0.647382 | 2_1:-63016125 | Msa0216840:CDS |
| GCCGTCTTGTTATCCGATCG+TGG | 0.647592 | 2_1:-63019298 | Msa0216840:CDS |
| GTGCATGGTTGGTTTAAGCG+CGG | 0.651626 | 2_1:-63015209 | Msa0216840:CDS |
| AATATTGTAGGTGATGGGGA+CGG | 0.651643 | 2_1:+63014125 | None:intergenic |
| ACTGTGAGCAGTAATGCACT+TGG | 0.654487 | 2_1:-63014972 | Msa0216840:CDS |
| AAAGATCTTGATAGTCCTTG+CGG | 0.654748 | 2_1:+63016110 | None:intergenic |
| ACCACGATCGGATAACAAGA+CGG | 0.656119 | 2_1:+63019297 | None:intergenic |
| AGCAAGGGACCAAACAACAA+CGG | 0.657203 | 2_1:+63015381 | None:intergenic |
| ATGCCAGGCCAACTGCCAGT+AGG | 0.660255 | 2_1:-63016151 | Msa0216840:CDS |
| TTAATGTTACCGGAAGCGGA+AGG | 0.680051 | 2_1:+63019191 | None:intergenic |
| GTGTTTCCATATGATCGACA+AGG | 0.689294 | 2_1:+63015358 | None:intergenic |
| AGGGTGTTAAACGTTCAACT+GGG | 0.694208 | 2_1:-63014546 | Msa0216840:CDS |
| TTATTGACAGCTAGCCACTG+GGG | 0.696818 | 2_1:-63016676 | Msa0216840:intron |
| GGTGATGAGGGAGATGAAGG+TGG | 0.707528 | 2_1:-63016555 | Msa0216840:CDS |
| CATTGCATGCTGCTGCAGTG+AGG | 0.714829 | 2_1:+63015404 | None:intergenic |
| GCAGCAGCCAGAAACCACCA+AGG | 0.727389 | 2_1:+63014182 | None:intergenic |
| GAAACACCGTTCAAGCAGCG+AGG | 0.728116 | 2_1:+63019232 | None:intergenic |
| ACGATCGGATAACAAGACGG+CGG | 0.806476 | 2_1:+63019300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATATATTAAAATACAA+CGG | + | chr2_1:63016002-63016021 | None:intergenic | 10.0% |
| !!! | CTTTTTATGTTTTTTTTATT+TGG | - | chr2_1:63016840-63016859 | Msa0216840:intron | 10.0% |
| !!! | TAACTAAAATTATGATTTTA+GGG | - | chr2_1:63017355-63017374 | Msa0216840:intron | 10.0% |
| !! | AAAGAAAAAAAAACATAAAT+GGG | + | chr2_1:63019504-63019523 | None:intergenic | 10.0% |
| !! | AAAAGAAAAAAAAACATAAA+TGG | + | chr2_1:63019505-63019524 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016258-63016277 | Msa0216840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016258-63016277 | Msa0216840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016258-63016277 | Msa0216840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016258-63016277 | Msa0216840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016258-63016277 | Msa0216840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+AGG | - | chr2_1:63016258-63016277 | Msa0216840:intron | 100.0% |
| !! | ATTGAATTATCATTGTTAAA+CGG | - | chr2_1:63014874-63014893 | Msa0216840:CDS | 15.0% |
| !! | AATTGTATAATCATATTTGT+CGG | - | chr2_1:63014995-63015014 | Msa0216840:intron | 15.0% |
| !!! | AAAATTAATCTGTTTGTTAT+GGG | - | chr2_1:63015315-63015334 | Msa0216840:CDS | 15.0% |
| !!! | TGTTTTTTTATGCAAATATT+AGG | - | chr2_1:63015511-63015530 | Msa0216840:intron | 15.0% |
| !!! | TTTTATACATCAAAATATTC+AGG | + | chr2_1:63015809-63015828 | None:intergenic | 15.0% |
| !! | AGAAAAAGGATATATTATAA+AGG | - | chr2_1:63015883-63015902 | Msa0216840:intron | 15.0% |
| !! | ATGCTAATATAAAAATAAAG+CGG | - | chr2_1:63016609-63016628 | Msa0216840:CDS | 15.0% |
| !!! | CTAACTAAAATTATGATTTT+AGG | - | chr2_1:63017354-63017373 | Msa0216840:intron | 15.0% |
| !! | CATTAAGATATAAGAAAATT+TGG | - | chr2_1:63017529-63017548 | Msa0216840:intron | 15.0% |
| !!! | TGTATAAAATTATTTTGAAC+AGG | - | chr2_1:63017921-63017940 | Msa0216840:intron | 15.0% |
| !!! | GTTAACTTTATTTTGATTTT+AGG | - | chr2_1:63018108-63018127 | Msa0216840:intron | 15.0% |
| !!! | TATTGATAACATTTTCTAAA+TGG | + | chr2_1:63018928-63018947 | None:intergenic | 15.0% |
| !! | AAATTCAGTAATAATATTGT+AGG | + | chr2_1:63019460-63019479 | None:intergenic | 15.0% |
| !!! | TATTATTACTGAATTTTTTC+AGG | - | chr2_1:63019464-63019483 | Msa0216840:five_prime_UTR | 15.0% |
| !!! | ATTATTACTGAATTTTTTCA+GGG | - | chr2_1:63019465-63019484 | Msa0216840:five_prime_UTR | 15.0% |
| !! | AATTGATTATTAAACTTCAG+TGG | - | chr2_1:63014694-63014713 | Msa0216840:intron | 20.0% |
| !!! | GAAAATTAATCTGTTTGTTA+TGG | - | chr2_1:63015314-63015333 | Msa0216840:CDS | 20.0% |
| !!! | AAATATTAGGTTGTTTGTTT+AGG | - | chr2_1:63015524-63015543 | Msa0216840:intron | 20.0% |
| !! | ATTGTAGGAAAATATTTGTT+AGG | - | chr2_1:63015745-63015764 | Msa0216840:intron | 20.0% |
| !!! | CAGTTTTCTTTTTTAGAAAA+AGG | - | chr2_1:63015869-63015888 | Msa0216840:intron | 20.0% |
| !! | AATATATTAAAATACAACGG+AGG | + | chr2_1:63015999-63016018 | None:intergenic | 20.0% |
| !!! | TATATTTTGTCAAAGAAACT+TGG | - | chr2_1:63016013-63016032 | Msa0216840:intron | 20.0% |
| !! | ATCACTACAATTTATAATCT+GGG | - | chr2_1:63016096-63016115 | Msa0216840:intron | 20.0% |
| !! | ATAAATTAAAGAACATCAAG+TGG | - | chr2_1:63016355-63016374 | Msa0216840:CDS | 20.0% |
| !! | TAAATTAAAGAACATCAAGT+GGG | - | chr2_1:63016356-63016375 | Msa0216840:CDS | 20.0% |
| !! | TTAATTAGTGAAATGATTTC+TGG | - | chr2_1:63016527-63016546 | Msa0216840:CDS | 20.0% |
| !! | TAATTAGTGAAATGATTTCT+GGG | - | chr2_1:63016528-63016547 | Msa0216840:CDS | 20.0% |
| !! | AAATGTATTATGAATCCAAA+TGG | - | chr2_1:63016730-63016749 | Msa0216840:intron | 20.0% |
| !! | CATTTATGTTATTAAATTGC+AGG | - | chr2_1:63017080-63017099 | Msa0216840:intron | 20.0% |
| !!! | AAAGGTATTTGAACAAAAAT+TGG | + | chr2_1:63017610-63017629 | None:intergenic | 20.0% |
| !!! | TTGTCTATTTTGAAAAGATA+TGG | - | chr2_1:63018047-63018066 | Msa0216840:intron | 20.0% |
| !! | AAAAGATATGGAAGTTTATT+GGG | - | chr2_1:63018059-63018078 | Msa0216840:intron | 20.0% |
| !!! | ATCAATAGTTTTGTATGTAT+TGG | - | chr2_1:63018941-63018960 | Msa0216840:intron | 20.0% |
| !!! | TGTCAAATTTTTTTGATTAC+TGG | - | chr2_1:63019340-63019359 | Msa0216840:CDS | 20.0% |
| ! | TTTCTTTCTTCACTAGAATT+AGG | - | chr2_1:63014516-63014535 | Msa0216840:CDS | 25.0% |
| ! | TTCTTTCTTCACTAGAATTA+GGG | - | chr2_1:63014517-63014536 | Msa0216840:CDS | 25.0% |
| ! | GTCGTTATATTCGTAAAAAA+TGG | - | chr2_1:63014761-63014780 | Msa0216840:intron | 25.0% |
| ! | TTGAATGTAATCACATGTAA+CGG | - | chr2_1:63014789-63014808 | Msa0216840:intron | 25.0% |
| !!! | AGGTACTTAATAATTTGTTG+AGG | - | chr2_1:63014839-63014858 | Msa0216840:intron | 25.0% |
| !!! | CTTAATAATTTGTTGAGGAT+TGG | - | chr2_1:63014844-63014863 | Msa0216840:intron | 25.0% |
| ! | TAAAATGAATCTGTCTGTTA+TGG | - | chr2_1:63015376-63015395 | Msa0216840:CDS | 25.0% |
| ! | AAAATGAATCTGTCTGTTAT+GGG | - | chr2_1:63015377-63015396 | Msa0216840:CDS | 25.0% |
| ! | TTCAATTAAGGTAATTCCTA+AGG | + | chr2_1:63015682-63015701 | None:intergenic | 25.0% |
| ! | GTGATCAAATGATTCAATTA+AGG | + | chr2_1:63015694-63015713 | None:intergenic | 25.0% |
| ! | TACAATATAATTCTTACCGA+TGG | + | chr2_1:63015731-63015750 | None:intergenic | 25.0% |
| ! | ATCGGTAAGAATTATATTGT+AGG | - | chr2_1:63015730-63015749 | Msa0216840:intron | 25.0% |
| ! | CATCACTACAATTTATAATC+TGG | - | chr2_1:63016095-63016114 | Msa0216840:intron | 25.0% |
| ! | TTTATCTGCATTGCAAAAAT+TGG | + | chr2_1:63016291-63016310 | None:intergenic | 25.0% |
| ! | AATGCAGATAAAATAAGTGA+AGG | - | chr2_1:63016299-63016318 | Msa0216840:CDS | 25.0% |
| !! | ATGTTTATACTTTGTTTCTC+TGG | - | chr2_1:63016470-63016489 | Msa0216840:intron | 25.0% |
| !! | TGTTTATACTTTGTTTCTCT+GGG | - | chr2_1:63016471-63016490 | Msa0216840:intron | 25.0% |
| ! | TATTTGATTAAATCTGTACG+AGG | + | chr2_1:63016764-63016783 | None:intergenic | 25.0% |
| ! | ATTGGAAAGATAATCAGTTA+TGG | - | chr2_1:63016931-63016950 | Msa0216840:intron | 25.0% |
| ! | TTTACAGTTTATGCTTGTTT+AGG | - | chr2_1:63017309-63017328 | Msa0216840:intron | 25.0% |
| !!! | TCATAATTTTAGTTAGTACG+CGG | + | chr2_1:63017350-63017369 | None:intergenic | 25.0% |
| !!! | AAAATTATGATTTTAGGGCT+TGG | - | chr2_1:63017360-63017379 | Msa0216840:intron | 25.0% |
| ! | AGGTAATCTCAATTATGTTT+CGG | - | chr2_1:63017490-63017509 | Msa0216840:intron | 25.0% |
| ! | TAAAACATAGATGAGAACTA+TGG | + | chr2_1:63017695-63017714 | None:intergenic | 25.0% |
| !!! | TTTTATCCTGAAAGTATAAC+AGG | - | chr2_1:63017710-63017729 | Msa0216840:intron | 25.0% |
| !! | TTTATCCTGAAAGTATAACA+GGG | - | chr2_1:63017711-63017730 | Msa0216840:intron | 25.0% |
| ! | TCATCAAATCTTGAATATGA+TGG | - | chr2_1:63017843-63017862 | Msa0216840:intron | 25.0% |
| !! | AGATTGATGAATATTCCTTT+TGG | - | chr2_1:63017866-63017885 | Msa0216840:intron | 25.0% |
| ! | GAAAAGATATGGAAGTTTAT+TGG | - | chr2_1:63018058-63018077 | Msa0216840:intron | 25.0% |
| ! | AAAGATATGGAAGTTTATTG+GGG | - | chr2_1:63018060-63018079 | Msa0216840:intron | 25.0% |
| ! | CTCATTTCAAATATGTTGTT+TGG | + | chr2_1:63018275-63018294 | None:intergenic | 25.0% |
| ! | TGAAAGGAAACAATACTTAT+TGG | - | chr2_1:63018824-63018843 | Msa0216840:intron | 25.0% |
| !! | ATAACATTTTCTAAATGGAG+TGG | + | chr2_1:63018923-63018942 | None:intergenic | 25.0% |
| !!! | ACTATTGTTGAATTTTGATG+TGG | - | chr2_1:63018969-63018988 | Msa0216840:intron | 25.0% |
| !! | TTTATTTGAAATGTCCTACA+GGG | - | chr2_1:63019005-63019024 | Msa0216840:intron | 25.0% |
| !! | CTTTGATATAAACCATTTTG+AGG | + | chr2_1:63019160-63019179 | None:intergenic | 25.0% |
| ! | TAATAATATTGTAGGTGATG+GGG | + | chr2_1:63019452-63019471 | None:intergenic | 25.0% |
| ! | GTAATAATATTGTAGGTGAT+GGG | + | chr2_1:63019453-63019472 | None:intergenic | 25.0% |
| ! | AGTAATAATATTGTAGGTGA+TGG | + | chr2_1:63019454-63019473 | None:intergenic | 25.0% |
| GAAAGAGAGAAAGTGAAAAA+CGG | + | chr2_1:63014107-63014126 | None:intergenic | 30.0% | |
| !!! | TTGGTGATAAGGTTTTAGAA+GGG | + | chr2_1:63014213-63014232 | None:intergenic | 30.0% |
| !!! | TTTGGTGATAAGGTTTTAGA+AGG | + | chr2_1:63014214-63014233 | None:intergenic | 30.0% |
| AACATTAATCCGGTTATGAA+AGG | - | chr2_1:63014394-63014413 | Msa0216840:CDS | 30.0% | |
| AAAGAAATATGACAAACCTC+AGG | + | chr2_1:63014499-63014518 | None:intergenic | 30.0% | |
| TTATTAAACTTCAGTGGCTT+AGG | - | chr2_1:63014700-63014719 | Msa0216840:intron | 30.0% | |
| TGTCTGTGTAAATATGTGTT+TGG | + | chr2_1:63014939-63014958 | None:intergenic | 30.0% | |
| !!! | GCACACTTTTTCATTATTAC+CGG | + | chr2_1:63015110-63015129 | None:intergenic | 30.0% |
| TTATGCAAGATGTGTTGTAT+TGG | - | chr2_1:63015189-63015208 | Msa0216840:CDS | 30.0% | |
| !! | TGTGAAGTATCGATTTGTTT+AGG | - | chr2_1:63015555-63015574 | Msa0216840:CDS | 30.0% |
| AAACGTATTAATGTGAAGAC+TGG | + | chr2_1:63015615-63015634 | None:intergenic | 30.0% | |
| ! | AATTCCTAAGGCATTATATG+TGG | + | chr2_1:63015670-63015689 | None:intergenic | 30.0% |
| ! | AATATTTGTTAGGCCTACAT+CGG | - | chr2_1:63015755-63015774 | Msa0216840:intron | 30.0% |
| TCGAAGATATGTTCAGAAAT+GGG | - | chr2_1:63016167-63016186 | Msa0216840:CDS | 30.0% | |
| !! | TATTTTGTTACTTCTGGTTG+CGG | - | chr2_1:63016212-63016231 | Msa0216840:intron | 30.0% |
| AGATAAAATAAGTGAAGGTG+AGG | - | chr2_1:63016304-63016323 | Msa0216840:CDS | 30.0% | |
| !!! | GTATTTCAGTTTTTTACCTC+TGG | + | chr2_1:63016507-63016526 | None:intergenic | 30.0% |
| ! | ATTTTTCCTTCCCAATAAGT+GGG | + | chr2_1:63016574-63016593 | None:intergenic | 30.0% |
| ! | TATTTTTCCTTCCCAATAAG+TGG | + | chr2_1:63016575-63016594 | None:intergenic | 30.0% |
| AGAATTAACAAAGACTCCAA+TGG | + | chr2_1:63016822-63016841 | None:intergenic | 30.0% | |
| GCTGTCAATAAAGCATAAAA+AGG | + | chr2_1:63016885-63016904 | None:intergenic | 30.0% | |
| ! | TACTTTGATGACTTTGATGA+TGG | - | chr2_1:63016994-63017013 | Msa0216840:intron | 30.0% |
| !! | TGTTTAGGTTGTAAAGCATT+TGG | - | chr2_1:63017324-63017343 | Msa0216840:intron | 30.0% |
| TGCTAAGAATTTCACCATTT+GGG | + | chr2_1:63017395-63017414 | None:intergenic | 30.0% | |
| TTGCTAAGAATTTCACCATT+TGG | + | chr2_1:63017396-63017415 | None:intergenic | 30.0% | |
| AAATTCATGATTCAGAAGCA+AGG | + | chr2_1:63017586-63017605 | None:intergenic | 30.0% | |
| ! | TCTCTCATTAAGATTTTCCT+CGG | + | chr2_1:63017670-63017689 | None:intergenic | 30.0% |
| ! | GGCTATATATTTTGCTTTCA+TGG | - | chr2_1:63017732-63017751 | Msa0216840:intron | 30.0% |
| ATACAACAATACACTCCAAA+AGG | + | chr2_1:63017884-63017903 | None:intergenic | 30.0% | |
| AGTTTACAAATCGGAAAGAT+AGG | - | chr2_1:63018020-63018039 | Msa0216840:intron | 30.0% | |
| !!! | ATTTTAGGATTAAGCAAGAG+TGG | - | chr2_1:63018123-63018142 | Msa0216840:intron | 30.0% |
| !!! | TTTTAGGATTAAGCAAGAGT+GGG | - | chr2_1:63018124-63018143 | Msa0216840:intron | 30.0% |
| !! | AGTTCAATGCTTTTTGTTCA+AGG | - | chr2_1:63018328-63018347 | Msa0216840:intron | 30.0% |
| AAACACTTTGGCTAAGAAAA+AGG | - | chr2_1:63018406-63018425 | Msa0216840:intron | 30.0% | |
| AATGCTATTGAACATAAGCT+GGG | + | chr2_1:63018455-63018474 | None:intergenic | 30.0% | |
| TTTCCTCCTACTAAATAAGT+TGG | - | chr2_1:63018752-63018771 | Msa0216840:intron | 30.0% | |
| TTCCTCCTACTAAATAAGTT+GGG | - | chr2_1:63018753-63018772 | Msa0216840:intron | 30.0% | |
| AAATGCCCAACTTATTTAGT+AGG | + | chr2_1:63018761-63018780 | None:intergenic | 30.0% | |
| TTTCCTTTCAACAGGATAAA+GGG | + | chr2_1:63018814-63018833 | None:intergenic | 30.0% | |
| ! | AAGTATTGTTTCCTTTCAAC+AGG | + | chr2_1:63018822-63018841 | None:intergenic | 30.0% |
| ! | TTTTGATGTGGTATGTATTG+AGG | - | chr2_1:63018981-63019000 | Msa0216840:intron | 30.0% |
| AACTCTTGAAAGTTTACAAC+AGG | - | chr2_1:63019106-63019125 | Msa0216840:CDS | 30.0% | |
| !! | ATAAACCATTTTGAGGATGA+TGG | + | chr2_1:63019153-63019172 | None:intergenic | 30.0% |
| AAAAAGGATTGTACGGAAAA+AGG | - | chr2_1:63019272-63019291 | Msa0216840:CDS | 30.0% | |
| AAGAACTGAATTGTTGAGAG+TGG | + | chr2_1:63014071-63014090 | None:intergenic | 35.0% | |
| !!! | TGATAAGGTTTTAGAAGGGA+TGG | + | chr2_1:63014209-63014228 | None:intergenic | 35.0% |
| CATAACCGGATTAATGTTAC+CGG | + | chr2_1:63014392-63014411 | None:intergenic | 35.0% | |
| CCGTATTTACCTTTCATAAC+CGG | + | chr2_1:63014406-63014425 | None:intergenic | 35.0% | |
| CCGGTTATGAAAGGTAAATA+CGG | - | chr2_1:63014403-63014422 | Msa0216840:CDS | 35.0% | |
| TGATAATACCTATGAAGCAC+TGG | - | chr2_1:63014735-63014754 | Msa0216840:intron | 35.0% | |
| !! | TATGTGTTTGGTGTCTGTAT+CGG | + | chr2_1:63014927-63014946 | None:intergenic | 35.0% |
| !!! | CACTTTTTCATTATTACCGG+CGG | + | chr2_1:63015107-63015126 | None:intergenic | 35.0% |
| AAACACACATTCAGTTGTGA+TGG | - | chr2_1:63015222-63015241 | Msa0216840:CDS | 35.0% | |
| AACACACATTCAGTTGTGAT+GGG | - | chr2_1:63015223-63015242 | Msa0216840:CDS | 35.0% | |
| TTGCTAATTGAGAAGACTGA+AGG | - | chr2_1:63015246-63015265 | Msa0216840:CDS | 35.0% | |
| !!! | GTGTTTTTGGTGTCTGAAAT+TGG | - | chr2_1:63015268-63015287 | Msa0216840:CDS | 35.0% |
| TGTTATGGGAGATTACATGT+TGG | - | chr2_1:63015329-63015348 | Msa0216840:CDS | 35.0% | |
| GTTATGGGAGATTACATGTT+GGG | - | chr2_1:63015330-63015349 | Msa0216840:CDS | 35.0% | |
| ! | AGATTCATTTTACGTGTCCA+AGG | + | chr2_1:63015368-63015387 | None:intergenic | 35.0% |
| ATCGTGAAGACTTATGATGT+TGG | - | chr2_1:63015459-63015478 | Msa0216840:intron | 35.0% | |
| AGAACCACATATAATGCCTT+AGG | - | chr2_1:63015663-63015682 | Msa0216840:intron | 35.0% | |
| GTCGAAGATATGTTCAGAAA+TGG | - | chr2_1:63016166-63016185 | Msa0216840:CDS | 35.0% | |
| !! | AGCTCCTATTTTGTTACTTC+TGG | - | chr2_1:63016206-63016225 | Msa0216840:intron | 35.0% |
| GCAACCAGAAGTAACAAAAT+AGG | + | chr2_1:63016213-63016232 | None:intergenic | 35.0% | |
| ATTAAAGAACATCAAGTGGG+AGG | - | chr2_1:63016359-63016378 | Msa0216840:CDS | 35.0% | |
| TTAAAGAACATCAAGTGGGA+GGG | - | chr2_1:63016360-63016379 | Msa0216840:CDS | 35.0% | |
| ! | TTTGAAGCATTCCCACTTAT+TGG | - | chr2_1:63016560-63016579 | Msa0216840:CDS | 35.0% |
| ! | TTGAAGCATTCCCACTTATT+GGG | - | chr2_1:63016561-63016580 | Msa0216840:CDS | 35.0% |
| GGAAAGATAATCAGTTATGG+TGG | - | chr2_1:63016934-63016953 | Msa0216840:intron | 35.0% | |
| AAGATAATCAGTTATGGTGG+TGG | - | chr2_1:63016937-63016956 | Msa0216840:intron | 35.0% | |
| !! | TTTTATTTGACGTCTCCTGA+AGG | - | chr2_1:63017151-63017170 | Msa0216840:intron | 35.0% |
| GCTATTTGACCGTAAATTTG+TGG | - | chr2_1:63017206-63017225 | Msa0216840:intron | 35.0% | |
| ACACAGCATCCACAAATTTA+CGG | + | chr2_1:63017218-63017237 | None:intergenic | 35.0% | |
| ATTTCGGCAAGCTTATGAAA+TGG | - | chr2_1:63017278-63017297 | Msa0216840:intron | 35.0% | |
| AATTCTTAGCAATGAATGCC+AGG | - | chr2_1:63017404-63017423 | Msa0216840:intron | 35.0% | |
| !! | TTTTCTGGAAATAAGCCTAC+TGG | + | chr2_1:63017437-63017456 | None:intergenic | 35.0% |
| ! | AAAGATCTTGATAGTCCTTG+CGG | + | chr2_1:63017463-63017482 | None:intergenic | 35.0% |
| GGACTATCAAGATCTTTCAT+TGG | - | chr2_1:63017466-63017485 | Msa0216840:intron | 35.0% | |
| TATCAAGATCTTTCATTGGC+AGG | - | chr2_1:63017470-63017489 | Msa0216840:intron | 35.0% | |
| CTGTAGCTTCTACTATAGAA+AGG | + | chr2_1:63017628-63017647 | None:intergenic | 35.0% | |
| ! | TCTCATTAAGATTTTCCTCG+GGG | + | chr2_1:63017668-63017687 | None:intergenic | 35.0% |
| ! | CTCTCATTAAGATTTTCCTC+GGG | + | chr2_1:63017669-63017688 | None:intergenic | 35.0% |
| TATAGCCCTGTTATACTTTC+AGG | + | chr2_1:63017719-63017738 | None:intergenic | 35.0% | |
| GACATCTATTCAATGTTCAC+AGG | + | chr2_1:63017788-63017807 | None:intergenic | 35.0% | |
| GAAACCTATACATGAAAGCA+GGG | + | chr2_1:63017958-63017977 | None:intergenic | 35.0% | |
| AGAAACCTATACATGAAAGC+AGG | + | chr2_1:63017959-63017978 | None:intergenic | 35.0% | |
| TCTATTAGAGCAAGTTGCTA+CGG | - | chr2_1:63017976-63017995 | Msa0216840:intron | 35.0% | |
| TTGAAATGAGCTATCCTCTT+AGG | - | chr2_1:63018285-63018304 | Msa0216840:intron | 35.0% | |
| TGAAATGAGCTATCCTCTTA+GGG | - | chr2_1:63018286-63018305 | Msa0216840:intron | 35.0% | |
| ACTTTGGCTAAGAAAAAGGA+AGG | - | chr2_1:63018410-63018429 | Msa0216840:intron | 35.0% | |
| GAATGCTATTGAACATAAGC+TGG | + | chr2_1:63018456-63018475 | None:intergenic | 35.0% | |
| !! | ATCTAGAGTGTTACTTGTGT+TGG | - | chr2_1:63018494-63018513 | Msa0216840:intron | 35.0% |
| ATCTGCATACAATTCATGCA+TGG | + | chr2_1:63018561-63018580 | None:intergenic | 35.0% | |
| ATGTGGATTTGATAGAGGAA+TGG | - | chr2_1:63018669-63018688 | Msa0216840:intron | 35.0% | |
| GTTCGTCAGTTTGATGTTAT+TGG | - | chr2_1:63018691-63018710 | Msa0216840:intron | 35.0% | |
| GTTTCCTTTCAACAGGATAA+AGG | + | chr2_1:63018815-63018834 | None:intergenic | 35.0% | |
| AACAACCATCATCCTCAAAA+TGG | - | chr2_1:63019145-63019164 | Msa0216840:CDS | 35.0% | |
| ! | TCAAAGAATGCAGTTGTTTC+TGG | - | chr2_1:63019174-63019193 | Msa0216840:CDS | 35.0% |
| !! | CAAAGAATGCAGTTGTTTCT+GGG | - | chr2_1:63019175-63019194 | Msa0216840:CDS | 35.0% |
| TGTTTACATCCGAAGAATCT+AGG | + | chr2_1:63019313-63019332 | None:intergenic | 35.0% | |
| AAGGGATGGATGAGTTCATT+GGG | + | chr2_1:63014195-63014214 | None:intergenic | 40.0% | |
| AAAGGTAAATACGGTGCGTT+TGG | - | chr2_1:63014412-63014431 | Msa0216840:CDS | 40.0% | |
| GCGACAATAGAGGAAAATTC+TGG | - | chr2_1:63014811-63014830 | Msa0216840:intron | 40.0% | |
| !! | AGAGGAAAATTCTGGAGTGA+AGG | - | chr2_1:63014819-63014838 | Msa0216840:intron | 40.0% |
| !!! | GTTTTTTTCCAACTTTCCGC+CGG | - | chr2_1:63015088-63015107 | Msa0216840:intron | 40.0% |
| !!! | GAGAAGACTGAAGGTGTTTT+TGG | - | chr2_1:63015255-63015274 | Msa0216840:CDS | 40.0% |
| TTGAGTTAAACGTGTTGCCT+TGG | - | chr2_1:63015410-63015429 | Msa0216840:CDS | 40.0% | |
| TGAAGACTTATGATGTTGGC+CGG | - | chr2_1:63015463-63015482 | Msa0216840:intron | 40.0% | |
| ! | AATGTGAAGACTGGTTGATC+CGG | + | chr2_1:63015606-63015625 | None:intergenic | 40.0% |
| ATGTTGTGCAAAGTAGGTAG+CGG | + | chr2_1:63016078-63016097 | None:intergenic | 40.0% | |
| GTAGTGATGTTGTGCAAAGT+AGG | + | chr2_1:63016084-63016103 | None:intergenic | 40.0% | |
| TTTATAATCTGGGCCATGCA+TGG | - | chr2_1:63016106-63016125 | Msa0216840:CDS | 40.0% | |
| TAGCAGTGAAAAGCCTAACA+GGG | + | chr2_1:63016334-63016353 | None:intergenic | 40.0% | |
| ATAGCAGTGAAAAGCCTAAC+AGG | + | chr2_1:63016335-63016354 | None:intergenic | 40.0% | |
| TAAAGAACATCAAGTGGGAG+GGG | - | chr2_1:63016361-63016380 | Msa0216840:CDS | 40.0% | |
| CTTCCTCTTTCTCATTCTCT+AGG | + | chr2_1:63016405-63016424 | None:intergenic | 40.0% | |
| CTAGAGAATGAGAAAGAGGA+AGG | - | chr2_1:63016403-63016422 | Msa0216840:intron | 40.0% | |
| TTTAAAGGTCCTGTGGTTCA+GGG | + | chr2_1:63016435-63016454 | None:intergenic | 40.0% | |
| ! | AACCACAGGACCTTTAAAGA+GGG | - | chr2_1:63016437-63016456 | Msa0216840:intron | 40.0% |
| !!! | TTTTTTACCTCTGGTGCCAA+AGG | + | chr2_1:63016498-63016517 | None:intergenic | 40.0% |
| !! | TACGAGGTTGATACACCATT+TGG | + | chr2_1:63016748-63016767 | None:intergenic | 40.0% |
| TTTATTGACAGCTAGCCACT+GGG | - | chr2_1:63016893-63016912 | Msa0216840:intron | 40.0% | |
| !! | TGACTTTGATGATGGTGATG+AGG | - | chr2_1:63017002-63017021 | Msa0216840:intron | 40.0% |
| !! | GACTTTGATGATGGTGATGA+GGG | - | chr2_1:63017003-63017022 | Msa0216840:intron | 40.0% |
| GAAGTATGCGTCTTCTAAAC+AGG | + | chr2_1:63017041-63017060 | None:intergenic | 40.0% | |
| AAGACGCATACTTCTTCAAG+AGG | - | chr2_1:63017047-63017066 | Msa0216840:intron | 40.0% | |
| TAGCAGCGTCTATTTCACAT+AGG | + | chr2_1:63017114-63017133 | None:intergenic | 40.0% | |
| ACAACACAAGGACAAAATGG+CGG | + | chr2_1:63017182-63017201 | None:intergenic | 40.0% | |
| TGGATGCTGTGTTGAATGAA+TGG | - | chr2_1:63017226-63017245 | Msa0216840:intron | 40.0% | |
| CTGTGTTGAATGAATGGCAA+AGG | - | chr2_1:63017232-63017251 | Msa0216840:intron | 40.0% | |
| TGAATGGCAAAGGACTATCA+TGG | - | chr2_1:63017242-63017261 | Msa0216840:intron | 40.0% | |
| ATTTCCAGAAAACTACCGCA+AGG | - | chr2_1:63017445-63017464 | Msa0216840:intron | 40.0% | |
| TGATTCAGAAGCAAGGACAT+GGG | + | chr2_1:63017579-63017598 | None:intergenic | 40.0% | |
| ATGATTCAGAAGCAAGGACA+TGG | + | chr2_1:63017580-63017599 | None:intergenic | 40.0% | |
| TAGTAGAAGCTACAGAAGAG+AGG | - | chr2_1:63017633-63017652 | Msa0216840:intron | 40.0% | |
| ! | CTCATTAAGATTTTCCTCGG+GGG | + | chr2_1:63017667-63017686 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCAGACATGAG+AGG | + | chr2_1:63017810-63017829 | None:intergenic | 40.0% |
| ! | TGTGGTGGGAGTTTACAAAT+CGG | - | chr2_1:63018011-63018030 | Msa0216840:intron | 40.0% |
| ATATGATCGACAAGGAGCAA+GGG | + | chr2_1:63018207-63018226 | None:intergenic | 40.0% | |
| GTGTTTCCATATGATCGACA+AGG | + | chr2_1:63018215-63018234 | None:intergenic | 40.0% | |
| !! | AGCATTGAACTCTCTTTTGC+AGG | + | chr2_1:63018319-63018338 | None:intergenic | 40.0% |
| TGGCTAAGAAAAAGGAAGGA+AGG | - | chr2_1:63018414-63018433 | Msa0216840:intron | 40.0% | |
| ATTACTGCTCACAGTTGGAA+CGG | + | chr2_1:63018593-63018612 | None:intergenic | 40.0% | |
| ! | CACATAGCAGTTGATATCTC+AGG | + | chr2_1:63018654-63018673 | None:intergenic | 40.0% |
| CTGAGATATCAACTGCTATG+TGG | - | chr2_1:63018652-63018671 | Msa0216840:intron | 40.0% | |
| CTGCTATGTGGATTTGATAG+AGG | - | chr2_1:63018664-63018683 | Msa0216840:intron | 40.0% | |
| TGCCCAACTTATTTAGTAGG+AGG | + | chr2_1:63018758-63018777 | None:intergenic | 40.0% | |
| GTACCCTTTATCCTGTTGAA+AGG | - | chr2_1:63018808-63018827 | Msa0216840:intron | 40.0% | |
| TTGAACGTTTAACACCCTGT+AGG | + | chr2_1:63019022-63019041 | None:intergenic | 40.0% | |
| ! | AGGGTGTTAAACGTTCAACT+GGG | - | chr2_1:63019024-63019043 | Msa0216840:intron | 40.0% |
| !!! | ATCCTTTTTCGACGAGCTTT+GGG | + | chr2_1:63019261-63019280 | None:intergenic | 40.0% |
| !!! | AATCCTTTTTCGACGAGCTT+TGG | + | chr2_1:63019262-63019281 | None:intergenic | 40.0% |
| CTCGTCGAAAAAGGATTGTA+CGG | - | chr2_1:63019265-63019284 | Msa0216840:CDS | 40.0% | |
| TGATACTGCTGTATTGTCCT+TGG | - | chr2_1:63019371-63019390 | Msa0216840:CDS | 40.0% | |
| GATGGGGACGGAAAAAATTT+GGG | + | chr2_1:63019436-63019455 | None:intergenic | 40.0% | |
| TGATGGGGACGGAAAAAATT+TGG | + | chr2_1:63019437-63019456 | None:intergenic | 40.0% | |
| !! | AATATTGTAGGTGATGGGGA+CGG | + | chr2_1:63019448-63019467 | None:intergenic | 40.0% |
| !! | AAGTCTCTTTGGGATTGGGT+TGG | - | chr2_1:63014007-63014026 | Msa0216840:three_prime_UTR | 45.0% |
| GAAGAAGATAGGCCCATAGA+GGG | + | chr2_1:63014038-63014057 | None:intergenic | 45.0% | |
| AGAAGAAGATAGGCCCATAG+AGG | + | chr2_1:63014039-63014058 | None:intergenic | 45.0% | |
| GAGAGGAAGGAGAAGAAGAT+AGG | + | chr2_1:63014049-63014068 | None:intergenic | 45.0% | |
| ATTGTTGAGAGTGGAGAGGA+AGG | + | chr2_1:63014062-63014081 | None:intergenic | 45.0% | |
| CTGAATTGTTGAGAGTGGAG+AGG | + | chr2_1:63014066-63014085 | None:intergenic | 45.0% | |
| GAAGGGATGGATGAGTTCAT+TGG | + | chr2_1:63014196-63014215 | None:intergenic | 45.0% | |
| !! | AGGGAAGGGTTTTGGTGATA+AGG | + | chr2_1:63014224-63014243 | None:intergenic | 45.0% |
| ACCACGATCGGATAACAAGA+CGG | + | chr2_1:63014276-63014295 | None:intergenic | 45.0% | |
| GGAAATATCGCTGTCGACAT+CGG | + | chr2_1:63014311-63014330 | None:intergenic | 45.0% | |
| TTAATGTTACCGGAAGCGGA+AGG | + | chr2_1:63014382-63014401 | None:intergenic | 45.0% | |
| CGGATTAATGTTACCGGAAG+CGG | + | chr2_1:63014386-63014405 | None:intergenic | 45.0% | |
| CGCTTCCGGTAACATTAATC+CGG | - | chr2_1:63014384-63014403 | Msa0216840:CDS | 45.0% | |
| CTTCGATTTCTCGAGCGTAA+CGG | + | chr2_1:63014440-63014459 | None:intergenic | 45.0% | |
| ACATGTAACGGCGACAATAG+AGG | - | chr2_1:63014801-63014820 | Msa0216840:intron | 45.0% | |
| !! | CATATTTGTCGGTGTCGTGT+TGG | - | chr2_1:63015006-63015025 | Msa0216840:intron | 45.0% |
| ! | CGTGTTGGTATCAGAAGTGT+AGG | - | chr2_1:63015021-63015040 | Msa0216840:intron | 45.0% |
| ! | CAGAAGTGTAGGTGCTACAA+AGG | - | chr2_1:63015032-63015051 | Msa0216840:intron | 45.0% |
| CATTATTACCGGCGGAAAGT+TGG | + | chr2_1:63015099-63015118 | None:intergenic | 45.0% | |
| TTGGGTTAAACGTGTTGCCT+TGG | - | chr2_1:63015348-63015367 | Msa0216840:CDS | 45.0% | |
| GCCTTGGACACGTAAAATTG+CGG | - | chr2_1:63015426-63015445 | Msa0216840:CDS | 45.0% | |
| ! | ACCGCAATTTTACGTGTCCA+AGG | + | chr2_1:63015430-63015449 | None:intergenic | 45.0% |
| CCTGTTTCATGTCACGAAAC+CGG | + | chr2_1:63015485-63015504 | None:intergenic | 45.0% | |
| !! | CTTGTGTGAAGTATCGTGTC+CGG | - | chr2_1:63015584-63015603 | Msa0216840:CDS | 45.0% |
| ACACGCATCATCAATGCCAT+CGG | - | chr2_1:63015712-63015731 | Msa0216840:intron | 45.0% | |
| TGCAGGATTATCACCGATGT+AGG | + | chr2_1:63015771-63015790 | None:intergenic | 45.0% | |
| GGCAGGACACTAACAAAAGA+AGG | + | chr2_1:63016054-63016073 | None:intergenic | 45.0% | |
| TGTTGTGCAAAGTAGGTAGC+GGG | + | chr2_1:63016077-63016096 | None:intergenic | 45.0% | |
| CTTATTTCGGTGAAGGGGTA+GGG | - | chr2_1:63016238-63016257 | Msa0216840:intron | 45.0% | |
| TTATTTCGGTGAAGGGGTAG+GGG | - | chr2_1:63016239-63016258 | Msa0216840:intron | 45.0% | |
| AAAGAACATCAAGTGGGAGG+GGG | - | chr2_1:63016362-63016381 | Msa0216840:CDS | 45.0% | |
| GGTCCTAGAGAATGAGAAAG+AGG | - | chr2_1:63016399-63016418 | Msa0216840:intron | 45.0% | |
| TTAAAGGTCCTGTGGTTCAG+GGG | + | chr2_1:63016434-63016453 | None:intergenic | 45.0% | |
| ! | CTTTAAAGGTCCTGTGGTTC+AGG | + | chr2_1:63016436-63016455 | None:intergenic | 45.0% |
| ! | GAACCACAGGACCTTTAAAG+AGG | - | chr2_1:63016436-63016455 | Msa0216840:intron | 45.0% |
| ! | ACCACAGGACCTTTAAAGAG+GGG | - | chr2_1:63016438-63016457 | Msa0216840:intron | 45.0% |
| ! | AGGACCTTTAAAGAGGGGAA+GGG | - | chr2_1:63016443-63016462 | Msa0216840:intron | 45.0% |
| !! | CTTTGTTTCTCTGGGACCTT+TGG | - | chr2_1:63016479-63016498 | Msa0216840:intron | 45.0% |
| AGCATTCCCACTTATTGGGA+AGG | - | chr2_1:63016565-63016584 | Msa0216840:CDS | 45.0% | |
| CAGGTGTGTTGCATACAGTA+TGG | + | chr2_1:63016787-63016806 | None:intergenic | 45.0% | |
| TACTGTATGCAACACACCTG+TGG | - | chr2_1:63016787-63016806 | Msa0216840:intron | 45.0% | |
| CTTTATTGACAGCTAGCCAC+TGG | - | chr2_1:63016892-63016911 | Msa0216840:intron | 45.0% | |
| TTATTGACAGCTAGCCACTG+GGG | - | chr2_1:63016894-63016913 | Msa0216840:intron | 45.0% | |
| !! | ATCAGTTATGGTGGTGGTGA+TGG | - | chr2_1:63016943-63016962 | Msa0216840:intron | 45.0% |
| !! | GGTGATGGAGGTGATGATAA+TGG | - | chr2_1:63016958-63016977 | Msa0216840:intron | 45.0% |
| AAAATGGCGGTCATTCCTTC+AGG | + | chr2_1:63017169-63017188 | None:intergenic | 45.0% | |
| !! | GCCATTTTGTCCTTGTGTTG+TGG | - | chr2_1:63017181-63017200 | Msa0216840:intron | 45.0% |
| GCCACAACACAAGGACAAAA+TGG | + | chr2_1:63017185-63017204 | None:intergenic | 45.0% | |
| CAAATAGCTGCCACAACACA+AGG | + | chr2_1:63017194-63017213 | None:intergenic | 45.0% | |
| ATAAGCTTGCCGAAATCCAG+CGG | + | chr2_1:63017274-63017293 | None:intergenic | 45.0% | |
| GAAATAAGCCTACTGGCAGT+TGG | + | chr2_1:63017430-63017449 | None:intergenic | 45.0% | |
| ! | TAGTCCTTGCGGTAGTTTTC+TGG | + | chr2_1:63017452-63017471 | None:intergenic | 45.0% |
| GATTCAGAAGCAAGGACATG+GGG | + | chr2_1:63017578-63017597 | None:intergenic | 45.0% | |
| CAGACCCTGCTTTCATGTAT+AGG | - | chr2_1:63017951-63017970 | Msa0216840:intron | 45.0% | |
| TTAGAGCAAGTTGCTACGGT+AGG | - | chr2_1:63017980-63017999 | Msa0216840:intron | 45.0% | |
| ! | CATGCAATGCCGTTGTTGTT+TGG | - | chr2_1:63018180-63018199 | Msa0216840:intron | 45.0% |
| AGCAAGGGACCAAACAACAA+CGG | + | chr2_1:63018192-63018211 | None:intergenic | 45.0% | |
| CATATGATCGACAAGGAGCA+AGG | + | chr2_1:63018208-63018227 | None:intergenic | 45.0% | |
| CTTGCTCCTTGTCGATCATA+TGG | - | chr2_1:63018206-63018225 | Msa0216840:intron | 45.0% | |
| TGCAGGTCAAATTCCCTAAG+AGG | + | chr2_1:63018302-63018321 | None:intergenic | 45.0% | |
| GGGTGCATTGTCAAACACTT+TGG | - | chr2_1:63018394-63018413 | Msa0216840:intron | 45.0% | |
| ! | AAAAAGGAAGGAAGGTGTGC+AGG | - | chr2_1:63018422-63018441 | Msa0216840:intron | 45.0% |
| ! | AAAAGGAAGGAAGGTGTGCA+GGG | - | chr2_1:63018423-63018442 | Msa0216840:intron | 45.0% |
| AGTGCATTACTGCTCACAGT+TGG | + | chr2_1:63018598-63018617 | None:intergenic | 45.0% | |
| ACTGTGAGCAGTAATGCACT+TGG | - | chr2_1:63018598-63018617 | Msa0216840:intron | 45.0% | |
| AGCAGTAATGCACTTGGCTA+TGG | - | chr2_1:63018604-63018623 | Msa0216840:intron | 45.0% | |
| ! | CTTGGCTATGGTGCTTTTCT+TGG | - | chr2_1:63018616-63018635 | Msa0216840:intron | 45.0% |
| TGTTCTTCAGCACAGCATTC+AGG | - | chr2_1:63018722-63018741 | Msa0216840:intron | 45.0% | |
| ! | CAGGGTGTTAAACGTTCAAC+TGG | - | chr2_1:63019023-63019042 | Msa0216840:intron | 45.0% |
| AGTTCATCTGACTGAGCTAG+TGG | + | chr2_1:63019090-63019109 | None:intergenic | 45.0% | |
| !! | AATGCAGTTGTTTCTGGGCT+TGG | - | chr2_1:63019180-63019199 | Msa0216840:CDS | 45.0% |
| GTCTCTTGGGCATCAAACAA+GGG | - | chr2_1:63019202-63019221 | Msa0216840:CDS | 45.0% | |
| GAAAAAGGTTGCTGCAGGAT+CGG | - | chr2_1:63019287-63019306 | Msa0216840:CDS | 45.0% | |
| TACTGCTGTATTGTCCTTGG+TGG | - | chr2_1:63019374-63019393 | Msa0216840:CDS | 45.0% | |
| ! | GTATTGTCCTTGGTGGTTTC+TGG | - | chr2_1:63019381-63019400 | Msa0216840:CDS | 45.0% |
| !! | TGGGTTGGTTGATCCCTCTA+TGG | - | chr2_1:63014022-63014041 | Msa0216840:three_prime_UTR | 50.0% |
| !! | GGGTTGGTTGATCCCTCTAT+GGG | - | chr2_1:63014023-63014042 | Msa0216840:three_prime_UTR | 50.0% |
| GAGACGACATCGTTTAGGGA+TGG | + | chr2_1:63014144-63014163 | None:intergenic | 50.0% | |
| GCGTGAGACGACATCGTTTA+GGG | + | chr2_1:63014148-63014167 | None:intergenic | 50.0% | |
| GGATGGATGAGTTCATTGGG+AGG | + | chr2_1:63014192-63014211 | None:intergenic | 50.0% | |
| ! | GGGAGTTTAGGGAAGGGTTT+TGG | + | chr2_1:63014232-63014251 | None:intergenic | 50.0% |
| AGGAGAGGGAGTTTAGGGAA+GGG | + | chr2_1:63014238-63014257 | None:intergenic | 50.0% | |
| TACGGAGGAGAGGGAGTTTA+GGG | + | chr2_1:63014243-63014262 | None:intergenic | 50.0% | |
| TTACGGAGGAGAGGGAGTTT+AGG | + | chr2_1:63014244-63014263 | None:intergenic | 50.0% | |
| ACGATCGGATAACAAGACGG+CGG | + | chr2_1:63014273-63014292 | None:intergenic | 50.0% | |
| AATATCGCTGTCGACATCGG+CGG | + | chr2_1:63014308-63014327 | None:intergenic | 50.0% | |
| GTCGACAGCGATATTTCCTC+CGG | - | chr2_1:63014313-63014332 | Msa0216840:CDS | 50.0% | |
| AAGTAACAAGTCTGCGCCTG+AGG | - | chr2_1:63014480-63014499 | Msa0216840:CDS | 50.0% | |
| ACGACTTGCCAGTGCTTCAT+AGG | + | chr2_1:63014746-63014765 | None:intergenic | 50.0% | |
| ! | TGTATCGGTGCTTCGCAGAA+AGG | + | chr2_1:63014912-63014931 | None:intergenic | 50.0% |
| CCGGTTTCGTGACATGAAAC+AGG | - | chr2_1:63015482-63015501 | Msa0216840:intron | 50.0% | |
| GGACACGTTATTGCTGATGC+AGG | + | chr2_1:63015788-63015807 | None:intergenic | 50.0% | |
| ! | TTGTGCAAAGTAGGTAGCGG+GGG | + | chr2_1:63016075-63016094 | None:intergenic | 50.0% |
| GTTGTGCAAAGTAGGTAGCG+GGG | + | chr2_1:63016076-63016095 | None:intergenic | 50.0% | |
| !! | CTGGTTGCGGTGCCTTATTT+CGG | - | chr2_1:63016225-63016244 | Msa0216840:intron | 50.0% |
| !! | CGGTGCCTTATTTCGGTGAA+GGG | - | chr2_1:63016232-63016251 | Msa0216840:intron | 50.0% |
| !! | GGTGCCTTATTTCGGTGAAG+GGG | - | chr2_1:63016233-63016252 | Msa0216840:intron | 50.0% |
| CCTACCCCTTCACCGAAATA+AGG | + | chr2_1:63016240-63016259 | None:intergenic | 50.0% | |
| ! | CCTTATTTCGGTGAAGGGGT+AGG | - | chr2_1:63016237-63016256 | Msa0216840:intron | 50.0% |
| TATTTCGGTGAAGGGGTAGG+GGG | - | chr2_1:63016240-63016259 | Msa0216840:intron | 50.0% | |
| AAGGTGAGGAAGTCCCTGTT+AGG | - | chr2_1:63016318-63016337 | Msa0216840:CDS | 50.0% | |
| AGGAATATCCCCTGAACCAC+AGG | - | chr2_1:63016423-63016442 | Msa0216840:intron | 50.0% | |
| ! | TCCCCTCTTTAAAGGTCCTG+TGG | + | chr2_1:63016442-63016461 | None:intergenic | 50.0% |
| ! | CAGGACCTTTAAAGAGGGGA+AGG | - | chr2_1:63016442-63016461 | Msa0216840:intron | 50.0% |
| ! | GGACCTTTAAAGAGGGGAAG+GGG | - | chr2_1:63016444-63016463 | Msa0216840:intron | 50.0% |
| CCAATGGTATGAGTAGCCAC+AGG | + | chr2_1:63016806-63016825 | None:intergenic | 50.0% | |
| CCTGTGGCTACTCATACCAT+TGG | - | chr2_1:63016803-63016822 | Msa0216840:intron | 50.0% | |
| TATTGACAGCTAGCCACTGG+GGG | - | chr2_1:63016895-63016914 | Msa0216840:intron | 50.0% | |
| !! | AGTTATGGTGGTGGTGATGG+AGG | - | chr2_1:63016946-63016965 | Msa0216840:intron | 50.0% |
| ! | GATGGTGATGAGGGAGATGA+AGG | - | chr2_1:63017012-63017031 | Msa0216840:intron | 50.0% |
| ACTATCATGGATTTGCCCGC+TGG | - | chr2_1:63017255-63017274 | Msa0216840:intron | 50.0% | |
| TGGATTTGCCCGCTGGATTT+CGG | - | chr2_1:63017262-63017281 | Msa0216840:intron | 50.0% | |
| TAAGCTTGCCGAAATCCAGC+GGG | + | chr2_1:63017273-63017292 | None:intergenic | 50.0% | |
| ! | CTTGGTTAGCTCAGCCCAAA+TGG | - | chr2_1:63017378-63017397 | Msa0216840:intron | 50.0% |
| ! | AGATTTTCCTCGGGGGACAA+TGG | + | chr2_1:63017660-63017679 | None:intergenic | 50.0% |
| !! | GTGCATGGTTGGTTTAAGCG+CGG | - | chr2_1:63018361-63018380 | Msa0216840:intron | 50.0% |
| !! | TGCATGGTTGGTTTAAGCGC+GGG | - | chr2_1:63018362-63018381 | Msa0216840:intron | 50.0% |
| !! | TGTTTCTGGGCTTGGTCTCT+TGG | - | chr2_1:63019188-63019207 | Msa0216840:CDS | 50.0% |
| ! | GTTTCTGGGCTTGGTCTCTT+GGG | - | chr2_1:63019189-63019208 | Msa0216840:CDS | 50.0% |
| GGTCTCTTGGGCATCAAACA+AGG | - | chr2_1:63019201-63019220 | Msa0216840:CDS | 50.0% | |
| CAAGGGAATGCAGATGTGTC+TGG | - | chr2_1:63019219-63019238 | Msa0216840:CDS | 50.0% | |
| CTCCCAAAGCTCGTCGAAAA+AGG | - | chr2_1:63019256-63019275 | Msa0216840:CDS | 50.0% | |
| GTACGGAAAAAGGTTGCTGC+AGG | - | chr2_1:63019282-63019301 | Msa0216840:CDS | 50.0% | |
| CAGGATCGGCCTAGATTCTT+CGG | - | chr2_1:63019301-63019320 | Msa0216840:CDS | 50.0% | |
| CGCGTGAGACGACATCGTTT+AGG | + | chr2_1:63014149-63014168 | None:intergenic | 55.0% | |
| GAGGAGAGGGAGTTTAGGGA+AGG | + | chr2_1:63014239-63014258 | None:intergenic | 55.0% | |
| GGATAACAAGACGGCGGTGA+CGG | + | chr2_1:63014267-63014286 | None:intergenic | 55.0% | |
| ! | GCCGTCTTGTTATCCGATCG+TGG | - | chr2_1:63014272-63014291 | Msa0216840:exon | 55.0% |
| ATATCGCTGTCGACATCGGC+GGG | + | chr2_1:63014307-63014326 | None:intergenic | 55.0% | |
| GAAACACCGTTCAAGCAGCG+AGG | + | chr2_1:63014341-63014360 | None:intergenic | 55.0% | |
| TGAACGGTGTTTCGCTGCTC+CGG | - | chr2_1:63014348-63014367 | Msa0216840:CDS | 55.0% | |
| ATGTTACCGGAAGCGGAAGG+AGG | + | chr2_1:63014379-63014398 | None:intergenic | 55.0% | |
| GAACCGCAAACTGCCATGCA+TGG | + | chr2_1:63016122-63016141 | None:intergenic | 55.0% | |
| AGGAGCTCAGCTCACAGTTG+TGG | + | chr2_1:63016193-63016212 | None:intergenic | 55.0% | |
| !! | GCGGTGCCTTATTTCGGTGA+AGG | - | chr2_1:63016231-63016250 | Msa0216840:intron | 55.0% |
| ATTTCGGTGAAGGGGTAGGG+GGG | - | chr2_1:63016241-63016260 | Msa0216840:intron | 55.0% | |
| CCTCCCCTTCCCCTCTTTAA+AGG | + | chr2_1:63016450-63016469 | None:intergenic | 55.0% | |
| ! | CCTTTAAAGAGGGGAAGGGG+AGG | - | chr2_1:63016447-63016466 | Msa0216840:intron | 55.0% |
| GGTGATGAGGGAGATGAAGG+TGG | - | chr2_1:63017015-63017034 | Msa0216840:intron | 55.0% | |
| CATTGCATGCTGCTGCAGTG+AGG | + | chr2_1:63018169-63018188 | None:intergenic | 55.0% | |
| CAAGGCTGCTGAGTTGTGCA+TGG | - | chr2_1:63018346-63018365 | Msa0216840:intron | 55.0% | |
| GCTGCTGAGTTGTGCATGGT+TGG | - | chr2_1:63018350-63018369 | Msa0216840:intron | 55.0% | |
| TTTAAGCGCGGGTGCAGTAC+AGG | - | chr2_1:63018373-63018392 | Msa0216840:intron | 55.0% | |
| TTAAGCGCGGGTGCAGTACA+GGG | - | chr2_1:63018374-63018393 | Msa0216840:intron | 55.0% | |
| GAGAGACTTCCAAACGTGCC+TGG | - | chr2_1:63019046-63019065 | Msa0216840:intron | 55.0% | |
| ACTTCCAAACGTGCCTGGCT+TGG | - | chr2_1:63019051-63019070 | Msa0216840:intron | 55.0% | |
| AACTCCAAGCCAGGCACGTT+TGG | + | chr2_1:63019058-63019077 | None:intergenic | 55.0% | |
| ATCTGCCTCAACTCCAAGCC+AGG | + | chr2_1:63019067-63019086 | None:intergenic | 55.0% | |
| !! | TGGTTTCTGGCTGCTGCTCT+AGG | - | chr2_1:63019394-63019413 | Msa0216840:CDS | 55.0% |
| !! | TTTCTGGCTGCTGCTCTAGG+AGG | - | chr2_1:63019397-63019416 | Msa0216840:CDS | 55.0% |
| !! | TTCTGGCTGCTGCTCTAGGA+GGG | - | chr2_1:63019398-63019417 | Msa0216840:CDS | 55.0% |
| ! | GGTGACGGTTACGGAGGAGA+GGG | + | chr2_1:63014252-63014271 | None:intergenic | 60.0% |
| ! | CAAGACGGCGGTGACGGTTA+CGG | + | chr2_1:63014261-63014280 | None:intergenic | 60.0% |
| TTCAAGCAGCGAGGAACCGG+AGG | + | chr2_1:63014332-63014351 | None:intergenic | 60.0% | |
| CCGTTCAAGCAGCGAGGAAC+CGG | + | chr2_1:63014335-63014354 | None:intergenic | 60.0% | |
| CCGGTTCCTCGCTGCTTGAA+CGG | - | chr2_1:63014332-63014351 | Msa0216840:CDS | 60.0% | |
| CACAGACACGTCGACGACAC+TGG | - | chr2_1:63014951-63014970 | Msa0216840:CDS | 60.0% | |
| GGGCCATGCATGGCAGTTTG+CGG | - | chr2_1:63016116-63016135 | Msa0216840:CDS | 60.0% | |
| TTTCGGTGAAGGGGTAGGGG+GGG | - | chr2_1:63016242-63016261 | Msa0216840:intron | 60.0% | |
| ACATCAAGTGGGAGGGGGAG+AGG | - | chr2_1:63016367-63016386 | Msa0216840:intron | 60.0% | |
| TGGGAGGGGGAGAGGAAAGA+GGG | - | chr2_1:63016375-63016394 | Msa0216840:intron | 60.0% | |
| ! | TCTGGGACCTTTGGCACCAG+AGG | - | chr2_1:63016488-63016507 | Msa0216840:intron | 60.0% |
| !! | GGGGGAGGTGGTGGAGATAT+TGG | - | chr2_1:63016913-63016932 | Msa0216840:intron | 60.0% |
| ATGCCAGGCCAACTGCCAGT+AGG | - | chr2_1:63017419-63017438 | Msa0216840:intron | 60.0% | |
| AAGCCTACTGGCAGTTGGCC+TGG | + | chr2_1:63017425-63017444 | None:intergenic | 60.0% | |
| CTACGGTAGGCTGCTCTGTG+TGG | - | chr2_1:63017993-63018012 | Msa0216840:intron | 60.0% | |
| GGTAGGCTGCTCTGTGTGGT+GGG | - | chr2_1:63017997-63018016 | Msa0216840:intron | 60.0% | |
| !! | ACGTGCCTGGCTTGGAGTTG+AGG | - | chr2_1:63019059-63019078 | Msa0216840:intron | 60.0% |
| GCAGCAGCCAGAAACCACCA+AGG | + | chr2_1:63019391-63019410 | None:intergenic | 60.0% | |
| !! | TCTGGCTGCTGCTCTAGGAG+GGG | - | chr2_1:63019399-63019418 | Msa0216840:CDS | 60.0% |
| ! | CGGTGACGGTTACGGAGGAG+AGG | + | chr2_1:63014253-63014272 | None:intergenic | 65.0% |
| CGGGAGAAGCGGACCACGAT+CGG | + | chr2_1:63014288-63014307 | None:intergenic | 65.0% | |
| GTCGACATCGGCGGGAGAAG+CGG | + | chr2_1:63014299-63014318 | None:intergenic | 65.0% | |
| !! | GCAAAGTAGGTAGCGGGGGC+AGG | + | chr2_1:63016071-63016090 | None:intergenic | 65.0% |
| TTCGGTGAAGGGGTAGGGGG+GGG | - | chr2_1:63016243-63016262 | Msa0216840:intron | 65.0% | |
| GTGGGAGGGGGAGAGGAAAG+AGG | - | chr2_1:63016374-63016393 | Msa0216840:intron | 65.0% | |
| GAGGGGGAGAGGAAAGAGGG+AGG | - | chr2_1:63016378-63016397 | Msa0216840:intron | 65.0% | |
| TGACAGCTAGCCACTGGGGG+AGG | - | chr2_1:63016898-63016917 | Msa0216840:intron | 65.0% | |
| ATCTCCACCACCTCCCCCAG+TGG | + | chr2_1:63016911-63016930 | None:intergenic | 65.0% | |
| GAGAGGACCATTGTCCCCCG+AGG | - | chr2_1:63017650-63017669 | Msa0216840:intron | 65.0% | |
| CGGTAGGCTGCTCTGTGTGG+TGG | - | chr2_1:63017996-63018015 | Msa0216840:intron | 65.0% | |
| ! | GACGGCGGTGACGGTTACGG+AGG | + | chr2_1:63014258-63014277 | None:intergenic | 70.0% |
| ACCGGAAGCGGAAGGAGGCG+CGG | + | chr2_1:63014374-63014393 | None:intergenic | 70.0% | |
| TCGGTGAAGGGGTAGGGGGG+GGG | - | chr2_1:63016244-63016263 | Msa0216840:intron | 70.0% | |
| CAGCTAGCCACTGGGGGAGG+TGG | - | chr2_1:63016901-63016920 | Msa0216840:intron | 70.0% | |
| CTAGCCACTGGGGGAGGTGG+TGG | - | chr2_1:63016904-63016923 | Msa0216840:intron | 70.0% | |
| ! | GAAGCGGAAGGAGGCGCGGC+CGG | + | chr2_1:63014370-63014389 | None:intergenic | 75.0% |
| GCCGCGCCTCCTTCCGCTTC+CGG | - | chr2_1:63014370-63014389 | Msa0216840:CDS | 75.0% | |
| CGGTGAAGGGGTAGGGGGGG+GGG | - | chr2_1:63016245-63016264 | Msa0216840:intron | 75.0% | |
| GGTGAAGGGGTAGGGGGGGG+GGG | - | chr2_1:63016246-63016265 | Msa0216840:intron | 75.0% | |
| GTGAAGGGGTAGGGGGGGGG+GGG | - | chr2_1:63016247-63016266 | Msa0216840:intron | 75.0% | |
| TGAAGGGGTAGGGGGGGGGG+GGG | - | chr2_1:63016248-63016267 | Msa0216840:intron | 75.0% | |
| ! | GAAGGGGTAGGGGGGGGGGG+GGG | - | chr2_1:63016249-63016268 | Msa0216840:intron | 80.0% |
| ! | AAGGGGTAGGGGGGGGGGGG+GGG | - | chr2_1:63016250-63016269 | Msa0216840:intron | 80.0% |
| ! | AGGGGTAGGGGGGGGGGGGG+GGG | - | chr2_1:63016251-63016270 | Msa0216840:intron | 85.0% |
| ! | GGGGTAGGGGGGGGGGGGGG+GGG | - | chr2_1:63016252-63016271 | Msa0216840:intron | 90.0% |
| ! | GGGTAGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016253-63016272 | Msa0216840:intron | 90.0% |
| ! | GGTAGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016254-63016273 | Msa0216840:intron | 90.0% |
| ! | GTAGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016255-63016274 | Msa0216840:intron | 90.0% |
| ! | TAGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016256-63016275 | Msa0216840:intron | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:63016257-63016276 | Msa0216840:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 63014005 | 63019587 | 63014005 | ID=Msa0216840;Name=Msa0216840 |
| chr2_1 | mRNA | 63014005 | 63019587 | 63014005 | ID=Msa0216840-mRNA-1;Parent=Msa0216840;Name=Msa0216840-mRNA-1;_AED=0.07;_eAED=0.07;_QI=149|1|1|1|1|1|8|273|526 |
| chr2_1 | exon | 63014005 | 63014566 | 63014005 | ID=Msa0216840-mRNA-1:exon:17513;Parent=Msa0216840-mRNA-1 |
| chr2_1 | exon | 63014849 | 63015013 | 63014849 | ID=Msa0216840-mRNA-1:exon:17512;Parent=Msa0216840-mRNA-1 |
| chr2_1 | exon | 63015157 | 63015462 | 63015157 | ID=Msa0216840-mRNA-1:exon:17511;Parent=Msa0216840-mRNA-1 |
| chr2_1 | exon | 63015551 | 63015649 | 63015551 | ID=Msa0216840-mRNA-1:exon:17510;Parent=Msa0216840-mRNA-1 |
| chr2_1 | exon | 63016101 | 63016216 | 63016101 | ID=Msa0216840-mRNA-1:exon:17509;Parent=Msa0216840-mRNA-1 |
| chr2_1 | exon | 63016293 | 63016385 | 63016293 | ID=Msa0216840-mRNA-1:exon:17508;Parent=Msa0216840-mRNA-1 |
| chr2_1 | exon | 63016524 | 63016688 | 63016524 | ID=Msa0216840-mRNA-1:exon:17507;Parent=Msa0216840-mRNA-1 |
| chr2_1 | exon | 63019091 | 63019587 | 63019091 | ID=Msa0216840-mRNA-1:exon:17506;Parent=Msa0216840-mRNA-1 |
| chr2_1 | five_prime_UTR | 63019439 | 63019587 | 63019439 | ID=Msa0216840-mRNA-1:five_prime_utr;Parent=Msa0216840-mRNA-1 |
| chr2_1 | CDS | 63019091 | 63019438 | 63019091 | ID=Msa0216840-mRNA-1:cds;Parent=Msa0216840-mRNA-1 |
| chr2_1 | CDS | 63016524 | 63016688 | 63016524 | ID=Msa0216840-mRNA-1:cds;Parent=Msa0216840-mRNA-1 |
| chr2_1 | CDS | 63016293 | 63016385 | 63016293 | ID=Msa0216840-mRNA-1:cds;Parent=Msa0216840-mRNA-1 |
| chr2_1 | CDS | 63016101 | 63016216 | 63016101 | ID=Msa0216840-mRNA-1:cds;Parent=Msa0216840-mRNA-1 |
| chr2_1 | CDS | 63015551 | 63015649 | 63015551 | ID=Msa0216840-mRNA-1:cds;Parent=Msa0216840-mRNA-1 |
| chr2_1 | CDS | 63015157 | 63015462 | 63015157 | ID=Msa0216840-mRNA-1:cds;Parent=Msa0216840-mRNA-1 |
| chr2_1 | CDS | 63014849 | 63015013 | 63014849 | ID=Msa0216840-mRNA-1:cds;Parent=Msa0216840-mRNA-1 |
| chr2_1 | CDS | 63014278 | 63014566 | 63014278 | ID=Msa0216840-mRNA-1:cds;Parent=Msa0216840-mRNA-1 |
| chr2_1 | three_prime_UTR | 63014005 | 63014277 | 63014005 | ID=Msa0216840-mRNA-1:three_prime_utr;Parent=Msa0216840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
