Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334960 | XP_003596613.1 | 98.696 | 230 | 2 | 1 | 1 | 229 | 1 | 230 | 3.78e-164 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334960 | sp|Q9FH37|ILR3_ARATH | 69.787 | 235 | 64 | 5 | 1 | 229 | 1 | 234 | 2.23e-107 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0334960 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0217490 | Msa0334960 | 0.924930 | 3.642181e-90 | -8.615850e-47 |
| Msa0334960 | Msa0622480 | 0.801580 | 8.419869e-49 | -8.615850e-47 |
| Msa0334960 | Msa1067980 | 0.812307 | 4.528421e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334960 | MtrunA17_Chr2g0319301 | 98.696 | 230 | 2 | 1 | 1 | 229 | 1 | 230 | 3.47e-168 | 462 |
| Msa0334960 | MtrunA17_Chr4g0042041 | 78.571 | 238 | 41 | 4 | 1 | 229 | 1 | 237 | 2.13e-125 | 354 |
| Msa0334960 | MtrunA17_Chr2g0323031 | 50.195 | 257 | 84 | 8 | 9 | 229 | 12 | 260 | 9.91e-73 | 222 |
| Msa0334960 | MtrunA17_Chr1g0167821 | 52.273 | 176 | 80 | 1 | 54 | 229 | 75 | 246 | 4.86e-58 | 184 |
| Msa0334960 | MtrunA17_Chr4g0038511 | 51.515 | 99 | 47 | 1 | 69 | 167 | 6 | 103 | 3.85e-23 | 94.4 |
| Msa0334960 | MtrunA17_Chr1g0161461 | 36.806 | 144 | 78 | 3 | 32 | 167 | 36 | 174 | 1.55e-19 | 85.9 |
| Msa0334960 | MtrunA17_Chr4g0060591 | 33.898 | 118 | 74 | 2 | 51 | 168 | 13 | 126 | 2.12e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334960 | AT5G54680.1 | 69.787 | 235 | 64 | 5 | 1 | 229 | 1 | 234 | 2.27e-108 | 311 |
| Msa0334960 | AT1G51070.1 | 62.343 | 239 | 67 | 6 | 1 | 229 | 1 | 226 | 6.23e-95 | 277 |
| Msa0334960 | AT1G51070.2 | 65.829 | 199 | 57 | 4 | 36 | 229 | 100 | 292 | 3.20e-84 | 252 |
| Msa0334960 | AT4G14410.2 | 52.041 | 196 | 77 | 6 | 37 | 229 | 96 | 277 | 2.87e-55 | 178 |
| Msa0334960 | AT4G14410.3 | 52.041 | 196 | 77 | 6 | 37 | 229 | 96 | 277 | 2.87e-55 | 178 |
| Msa0334960 | AT4G14410.1 | 52.041 | 196 | 77 | 6 | 37 | 229 | 102 | 283 | 3.25e-55 | 178 |
| Msa0334960 | AT3G23210.2 | 52.261 | 199 | 87 | 5 | 35 | 229 | 97 | 291 | 5.16e-55 | 178 |
| Msa0334960 | AT3G23210.1 | 52.261 | 199 | 87 | 5 | 35 | 229 | 126 | 320 | 1.42e-54 | 177 |
| Msa0334960 | AT3G19860.1 | 45.299 | 117 | 59 | 2 | 66 | 178 | 2 | 117 | 1.27e-22 | 93.6 |
| Msa0334960 | AT3G19860.3 | 45.299 | 117 | 59 | 2 | 66 | 178 | 33 | 148 | 2.31e-22 | 93.6 |
| Msa0334960 | AT3G19860.2 | 45.299 | 117 | 59 | 2 | 66 | 178 | 55 | 170 | 2.45e-22 | 93.6 |
| Msa0334960 | AT4G36060.4 | 38.971 | 136 | 72 | 5 | 69 | 199 | 26 | 155 | 1.35e-18 | 82.4 |
| Msa0334960 | AT4G36060.2 | 39.706 | 136 | 71 | 5 | 69 | 199 | 26 | 155 | 2.37e-18 | 81.6 |
| Msa0334960 | AT4G36060.3 | 38.971 | 136 | 72 | 5 | 69 | 199 | 44 | 173 | 4.51e-18 | 81.3 |
| Msa0334960 | AT4G36060.1 | 39.706 | 136 | 71 | 5 | 69 | 199 | 44 | 173 | 4.88e-18 | 81.3 |
| Msa0334960 | AT3G47640.1 | 30.128 | 156 | 93 | 4 | 73 | 216 | 31 | 182 | 5.02e-12 | 63.9 |
| Msa0334960 | AT3G47640.3 | 30.128 | 156 | 93 | 4 | 73 | 216 | 31 | 182 | 5.02e-12 | 63.9 |
| Msa0334960 | AT3G47640.2 | 30.128 | 156 | 93 | 4 | 73 | 216 | 31 | 182 | 5.02e-12 | 63.9 |
Find 93 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAAGATTAAAGAGTTAA+AGG | 0.125284 | 2_4:-54055160 | Msa0334960:intron |
| AATTTGAGTCTTTCAACTTT+TGG | 0.132451 | 2_4:+54055193 | None:intergenic |
| TGAAAGGCATTAACTTGTTT+GGG | 0.247330 | 2_4:+54054814 | None:intergenic |
| ATGAAAGGCATTAACTTGTT+TGG | 0.257284 | 2_4:+54054813 | None:intergenic |
| CGTCCACCAGTTGCCTAAAT+TGG | 0.259524 | 2_4:-54054717 | Msa0334960:exon |
| AATTGTACGGTTGCCAATTT+AGG | 0.270365 | 2_4:+54054704 | None:intergenic |
| ATTGATAGGTTTGTTGAATT+AGG | 0.284956 | 2_4:-54055309 | Msa0334960:intron |
| GGGAAAATTCAACCCAACTA+TGG | 0.314333 | 2_4:-54056760 | Msa0334960:exon |
| CCGGCTTTAATATTTGTTGC+TGG | 0.318492 | 2_4:-54054508 | Msa0334960:three_prime_UTR |
| CTTGTTTGGCTGTCTTCTTC+CGG | 0.325700 | 2_4:-54054527 | Msa0334960:three_prime_UTR |
| TAAAAGTTAATAAGCTTGTT+TGG | 0.333347 | 2_4:-54054541 | Msa0334960:three_prime_UTR |
| ATACATAGTAAATAACTAAA+AGG | 0.343916 | 2_4:+54054627 | None:intergenic |
| AGGAGGGTGTGTCAAGAAAC+TGG | 0.351738 | 2_4:+54054872 | None:intergenic |
| ATGTGCTCCTTCCAGCTCTA+AGG | 0.373277 | 2_4:-54055466 | Msa0334960:CDS |
| ATTGAAGAAACTTGTTTGTT+TGG | 0.373340 | 2_4:+54056893 | None:intergenic |
| AACTAAAAGGAAAGAGTGTA+TGG | 0.377933 | 2_4:+54054640 | None:intergenic |
| GCATTAACTTGTTTGGGGCT+TGG | 0.383016 | 2_4:+54054820 | None:intergenic |
| CTCTGCTCCTAGTATTGAAA+TGG | 0.383024 | 2_4:-54055849 | Msa0334960:intron |
| GCAAATGCAGCAGGGATTGC+AGG | 0.388118 | 2_4:+54054852 | None:intergenic |
| AAGGAGCCATCGACAGAAAC+AGG | 0.397378 | 2_4:+54056684 | None:intergenic |
| CGGTTGCCAATTTAGGCAAC+TGG | 0.406655 | 2_4:+54054711 | None:intergenic |
| CCGAATGGTGACACAGTTGC+GGG | 0.410732 | 2_4:-54055223 | Msa0334960:CDS |
| AAGTTGAAAGACTCAAATTC+AGG | 0.412450 | 2_4:-54055189 | Msa0334960:CDS |
| TACATAAAGAAACTTTCATT+AGG | 0.433731 | 2_4:+54054355 | None:intergenic |
| TGTTGAATTAGGCTCCATCT+TGG | 0.436518 | 2_4:-54055298 | Msa0334960:CDS |
| TAAGGCTGAGAAGGAGAAGT+TGG | 0.437128 | 2_4:-54054925 | Msa0334960:CDS |
| GAAGGAGAAGTTGGAGCAGC+AGG | 0.442475 | 2_4:-54054916 | Msa0334960:CDS |
| ATGCCTTTCATGAGTTATCC+AGG | 0.449494 | 2_4:-54054801 | Msa0334960:CDS |
| AATTGCCACATGGCAACTCC+TGG | 0.456430 | 2_4:+54054783 | None:intergenic |
| CCCGCAACTGTGTCACCATT+CGG | 0.471915 | 2_4:+54055223 | None:intergenic |
| TGATGAGAAGCAGAGGCTTA+AGG | 0.477872 | 2_4:-54054943 | Msa0334960:CDS |
| AAATCTCATTTCTTCACCGC+CGG | 0.486690 | 2_4:-54056801 | Msa0334960:five_prime_UTR |
| TTTCCCCGGAAAACACCAAT+TGG | 0.488899 | 2_4:-54056737 | Msa0334960:CDS |
| GAGAGAAGTTGCGGAGGGAT+AGG | 0.490114 | 2_4:-54055437 | Msa0334960:CDS |
| CCTTGATGAGCAAATGCAGC+AGG | 0.490383 | 2_4:+54054843 | None:intergenic |
| AGTACAGTAACATGTTACTT+TGG | 0.496339 | 2_4:-54054481 | Msa0334960:three_prime_UTR |
| AGTTACCTCTTCTTCGAACC+AGG | 0.496718 | 2_4:+54055788 | None:intergenic |
| TTCTTGTTGCAGAGGTAGAT+CGG | 0.503971 | 2_4:-54055493 | Msa0334960:intron |
| TCCGAATGGTGACACAGTTG+CGG | 0.503977 | 2_4:-54055224 | Msa0334960:CDS |
| TTAGGCTCCATCTTGGAGCC+TGG | 0.505934 | 2_4:-54055291 | Msa0334960:CDS |
| TGTGAGGTATCCACGGCGGC+TGG | 0.507559 | 2_4:+54054753 | None:intergenic |
| GAAATTCCTGTTTCTGTCGA+TGG | 0.514909 | 2_4:-54056690 | Msa0334960:CDS |
| CAGGAATTTCATCAATCAAA+GGG | 0.518186 | 2_4:+54056703 | None:intergenic |
| GCCATTGGAGAGTTGAGGTG+GGG | 0.518653 | 2_4:+54056647 | None:intergenic |
| TTTCCGGGGAAACCATAGTT+GGG | 0.520904 | 2_4:+54056748 | None:intergenic |
| AGGGTAATCGAAAAGCCAAT+TGG | 0.523695 | 2_4:+54056722 | None:intergenic |
| CGCCATTGGAGAGTTGAGGT+GGG | 0.524275 | 2_4:+54056646 | None:intergenic |
| ACAGGAATTTCATCAATCAA+AGG | 0.524589 | 2_4:+54056702 | None:intergenic |
| CTCTCGACATGCCTTAGAGC+TGG | 0.527575 | 2_4:+54055455 | None:intergenic |
| CAACCCAACTATGGTTTCCC+CGG | 0.528497 | 2_4:-54056751 | Msa0334960:exon |
| GCAGAGGCTTAAGGCTGAGA+AGG | 0.531438 | 2_4:-54054934 | Msa0334960:CDS |
| CCTGCTGCATTTGCTCATCA+AGG | 0.536277 | 2_4:-54054843 | Msa0334960:CDS |
| AATCTCATTTCTTCACCGCC+GGG | 0.536866 | 2_4:-54056800 | Msa0334960:five_prime_UTR |
| CACCTCAACTCTCCAATGGC+GGG | 0.541239 | 2_4:-54056644 | Msa0334960:intron |
| GAGGTATCCACGGCGGCTGG+TGG | 0.543817 | 2_4:+54054756 | None:intergenic |
| CAAAATCAGATACCCGCCAT+TGG | 0.547933 | 2_4:+54056632 | None:intergenic |
| GTGTGTCAAGAAACTGGGTT+GGG | 0.557971 | 2_4:+54054878 | None:intergenic |
| GCTCCATCTTGGAGCCTGGA+AGG | 0.560039 | 2_4:-54055287 | Msa0334960:CDS |
| AAGAACCTGGTTCGAAGAAG+AGG | 0.561194 | 2_4:-54055793 | Msa0334960:intron |
| CCAGCAACAAATATTAAAGC+CGG | 0.561728 | 2_4:+54054508 | None:intergenic |
| CCGCCATTGGAGAGTTGAGG+TGG | 0.568621 | 2_4:+54056645 | None:intergenic |
| GAAAGGCATTAACTTGTTTG+GGG | 0.569345 | 2_4:+54054815 | None:intergenic |
| CCATTGGAGAGTTGAGGTGG+GGG | 0.574009 | 2_4:+54056648 | None:intergenic |
| TGGCCTTCCAGGCTCCAAGA+TGG | 0.580720 | 2_4:+54055284 | None:intergenic |
| AATGGATGATAGCTCTCTAG+TGG | 0.589069 | 2_4:-54055831 | Msa0334960:CDS |
| CGACATGCCTTAGAGCTGGA+AGG | 0.592843 | 2_4:+54055459 | None:intergenic |
| CAATTTAGGCAACTGGTGGA+CGG | 0.594311 | 2_4:+54054718 | None:intergenic |
| CCACCTCAACTCTCCAATGG+CGG | 0.595417 | 2_4:-54056645 | Msa0334960:CDS |
| ATTCATGCCACCAGCCGCCG+TGG | 0.596384 | 2_4:-54054763 | Msa0334960:CDS |
| AGGCATGTCGAGAGAAGTTG+CGG | 0.604709 | 2_4:-54055446 | Msa0334960:CDS |
| ATGATCTTGTGAGGTATCCA+CGG | 0.609314 | 2_4:+54054746 | None:intergenic |
| ACTCCTGGATAACTCATGAA+AGG | 0.613176 | 2_4:+54054798 | None:intergenic |
| TCTGATGGTATCAAAGAACC+TGG | 0.613566 | 2_4:-54055806 | Msa0334960:CDS |
| TTGCCAATTTAGGCAACTGG+TGG | 0.613733 | 2_4:+54054714 | None:intergenic |
| ACTAAAAGGAAAGAGTGTAT+GGG | 0.620179 | 2_4:+54054641 | None:intergenic |
| TACCCGCCATTGGAGAGTTG+AGG | 0.621755 | 2_4:+54056642 | None:intergenic |
| AACTTCGTGATGAGAAGCAG+AGG | 0.627738 | 2_4:-54054950 | Msa0334960:CDS |
| GGTGTGTCAAGAAACTGGGT+TGG | 0.631646 | 2_4:+54054877 | None:intergenic |
| AGCTCTCTAGTGGATTCTGA+TGG | 0.634077 | 2_4:-54055821 | Msa0334960:CDS |
| ATGGCTCCTTCGCCTTCACG+TGG | 0.638692 | 2_4:-54056671 | Msa0334960:CDS |
| CTTGATGAGCAAATGCAGCA+GGG | 0.642514 | 2_4:+54054844 | None:intergenic |
| AATGCAGCAGGGATTGCAGG+AGG | 0.644570 | 2_4:+54054855 | None:intergenic |
| ATGCAGCAGGGATTGCAGGA+GGG | 0.653807 | 2_4:+54054856 | None:intergenic |
| CATGTCGAGAGAAGTTGCGG+AGG | 0.656044 | 2_4:-54055443 | Msa0334960:CDS |
| ATGTCGAGAGAAGTTGCGGA+GGG | 0.659997 | 2_4:-54055442 | Msa0334960:CDS |
| TCTGATTGATGCTGTCCGAA+TGG | 0.662212 | 2_4:-54055238 | Msa0334960:CDS |
| TGGTGGCATGAATTGCCACA+TGG | 0.684045 | 2_4:+54054773 | None:intergenic |
| GGAGGGTGTGTCAAGAAACT+GGG | 0.689856 | 2_4:+54054873 | None:intergenic |
| ACGGAGTACATGATCTTGTG+AGG | 0.697745 | 2_4:+54054737 | None:intergenic |
| AAGGCCACCTAAAACAGACA+AGG | 0.714338 | 2_4:-54055268 | Msa0334960:CDS |
| CGAATGGTGACACAGTTGCG+GGG | 0.732614 | 2_4:-54055222 | Msa0334960:CDS |
| GTTATCCAGGAGTTGCCATG+TGG | 0.743485 | 2_4:-54054788 | Msa0334960:CDS |
| ATCTTGTGAGGTATCCACGG+CGG | 0.745646 | 2_4:+54054749 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAAATACAAAAATAT+GGG | + | chr2_4:54055849-54055868 | None:intergenic | 10.0% |
| !!! | TCTTTTAATGGTAATAAAAT+GGG | + | chr2_4:54054372-54054391 | None:intergenic | 15.0% |
| !!! | TTCTTTTAATGGTAATAAAA+TGG | + | chr2_4:54054373-54054392 | None:intergenic | 15.0% |
| !! | ACTTCATTTGAAAAAAAAAA+TGG | - | chr2_4:54054499-54054518 | Msa0334960:three_prime_UTR | 15.0% |
| !!! | AAAGTTTGAATTTTTAAACT+TGG | - | chr2_4:54054822-54054841 | Msa0334960:CDS | 15.0% |
| !!! | AAGTTTGAATTTTTAAACTT+GGG | - | chr2_4:54054823-54054842 | Msa0334960:CDS | 15.0% |
| !! | ACTTAGTAAATTAATACTAT+GGG | + | chr2_4:54055470-54055489 | None:intergenic | 15.0% |
| !! | AACTTAGTAAATTAATACTA+TGG | + | chr2_4:54055471-54055490 | None:intergenic | 15.0% |
| !! | CAAGAAAAAATACAAAAATA+TGG | + | chr2_4:54055850-54055869 | None:intergenic | 15.0% |
| !!! | AAATGAAATGATTTAGAATA+TGG | + | chr2_4:54056270-54056289 | None:intergenic | 15.0% |
| !! | AGTTAAAGTATAAAAATGAA+GGG | + | chr2_4:54056293-54056312 | None:intergenic | 15.0% |
| !! | ATACATAGTAAATAACTAAA+AGG | + | chr2_4:54056733-54056752 | None:intergenic | 15.0% |
| !! | TATCCACAAATTTGAAAAAA+GGG | + | chr2_4:54054785-54054804 | None:intergenic | 20.0% |
| !! | TTATCCACAAATTTGAAAAA+AGG | + | chr2_4:54054786-54054805 | None:intergenic | 20.0% |
| !!! | GTAGTTTTTATAAATTGTTG+TGG | - | chr2_4:54054870-54054889 | Msa0334960:CDS | 20.0% |
| !! | GTAATATAATTGAGTCAAAT+TGG | - | chr2_4:54055706-54055725 | Msa0334960:intron | 20.0% |
| !! | CAGTTAAAGTATAAAAATGA+AGG | + | chr2_4:54056294-54056313 | None:intergenic | 20.0% |
| !! | TCAATATTCAGTGTTATATA+AGG | + | chr2_4:54056356-54056375 | None:intergenic | 20.0% |
| !!! | TAAAAGTTAATAAGCTTGTT+TGG | - | chr2_4:54056816-54056835 | Msa0334960:five_prime_UTR | 20.0% |
| !! | TACATAAAGAAACTTTCATT+AGG | + | chr2_4:54057005-54057024 | None:intergenic | 20.0% |
| ! | AAAATAAAAACCACGTTTGA+GGG | + | chr2_4:54054437-54054456 | None:intergenic | 25.0% |
| ! | AAAAATAAAAACCACGTTTG+AGG | + | chr2_4:54054438-54054457 | None:intergenic | 25.0% |
| !! | ATTGAAGAAACTTGTTTGTT+TGG | + | chr2_4:54054467-54054486 | None:intergenic | 25.0% |
| ! | AAACCCTAAATTAAGAAAAG+GGG | + | chr2_4:54054751-54054770 | None:intergenic | 25.0% |
| ! | GAAACCCTAAATTAAGAAAA+GGG | + | chr2_4:54054752-54054771 | None:intergenic | 25.0% |
| ! | TGAAACCCTAAATTAAGAAA+AGG | + | chr2_4:54054753-54054772 | None:intergenic | 25.0% |
| ! | ATCCACAAATTTGAAAAAAG+GGG | + | chr2_4:54054784-54054803 | None:intergenic | 25.0% |
| !! | AAATTGTTGTGGTTTTCATT+TGG | - | chr2_4:54054881-54054900 | Msa0334960:CDS | 25.0% |
| !! | TGTTATGTTTTGTGTACTTA+TGG | - | chr2_4:54054916-54054935 | Msa0334960:CDS | 25.0% |
| !! | GACAAGTGTAATTTTTGAAT+TGG | - | chr2_4:54054988-54055007 | Msa0334960:intron | 25.0% |
| ! | GTAAATTAATACTATGGGAT+GGG | + | chr2_4:54055465-54055484 | None:intergenic | 25.0% |
| ! | AGTAAATTAATACTATGGGA+TGG | + | chr2_4:54055466-54055485 | None:intergenic | 25.0% |
| ! | CTTGTTTAATGAGAAATGAA+AGG | + | chr2_4:54055606-54055625 | None:intergenic | 25.0% |
| ! | TCTTATAGTATACAAGCAAT+AGG | + | chr2_4:54055817-54055836 | None:intergenic | 25.0% |
| ! | ATAATAAAAGGCAAGATAGT+GGG | + | chr2_4:54055963-54055982 | None:intergenic | 25.0% |
| ! | AATAATAAAAGGCAAGATAG+TGG | + | chr2_4:54055964-54055983 | None:intergenic | 25.0% |
| ! | CTAATATGATTGACATTGAT+AGG | - | chr2_4:54056034-54056053 | Msa0334960:intron | 25.0% |
| !!! | ATTGATAGGTTTGTTGAATT+AGG | - | chr2_4:54056048-54056067 | Msa0334960:intron | 25.0% |
| !! | ATTTGAGTCTTTCAACTTTT+GGG | + | chr2_4:54056166-54056185 | None:intergenic | 25.0% |
| !! | AATTTGAGTCTTTCAACTTT+TGG | + | chr2_4:54056167-54056186 | None:intergenic | 25.0% |
| ! | AGAGAAGATTAAAGAGTTAA+AGG | - | chr2_4:54056197-54056216 | Msa0334960:intron | 25.0% |
| ! | AGATTAAAGAGTTAAAGGTA+AGG | - | chr2_4:54056202-54056221 | Msa0334960:intron | 25.0% |
| !! | AAATTGCTCTAAATCAATTG+AGG | + | chr2_4:54056228-54056247 | None:intergenic | 25.0% |
| !!! | AATTTTCTTTGAGAGATAGA+AGG | - | chr2_4:54056243-54056262 | Msa0334960:intron | 25.0% |
| !!! | AATTTTTTGGGATTCCATTA+TGG | - | chr2_4:54056672-54056691 | Msa0334960:CDS | 25.0% |
| CAGGAATTTCATCAATCAAA+GGG | + | chr2_4:54054657-54054676 | None:intergenic | 30.0% | |
| ACAGGAATTTCATCAATCAA+AGG | + | chr2_4:54054658-54054677 | None:intergenic | 30.0% | |
| ! | TTTGCCCCTTTTCTTAATTT+AGG | - | chr2_4:54054744-54054763 | Msa0334960:CDS | 30.0% |
| ! | TTGCCCCTTTTCTTAATTTA+GGG | - | chr2_4:54054745-54054764 | Msa0334960:CDS | 30.0% |
| ! | GTTTTGTGTACTTATGGTTA+TGG | - | chr2_4:54054922-54054941 | Msa0334960:CDS | 30.0% |
| TTTGTAGTAGAACTTGAACT+AGG | - | chr2_4:54054949-54054968 | Msa0334960:CDS | 30.0% | |
| AATTGATATGTGTTAAACGC+TGG | - | chr2_4:54055197-54055216 | Msa0334960:CDS | 30.0% | |
| !! | CCTAGTTTTCCATAATACAA+GGG | + | chr2_4:54055295-54055314 | None:intergenic | 30.0% |
| !! | TCCTAGTTTTCCATAATACA+AGG | + | chr2_4:54055296-54055315 | None:intergenic | 30.0% |
| ! | ATTCCTTTACCTTGGATTTT+AGG | - | chr2_4:54055393-54055412 | Msa0334960:intron | 30.0% |
| AAACCTAAAATCCAAGGTAA+AGG | + | chr2_4:54055399-54055418 | None:intergenic | 30.0% | |
| !!! | TTACCTTGGATTTTAGGTTT+TGG | - | chr2_4:54055399-54055418 | Msa0334960:intron | 30.0% |
| AAACCAAAACCTAAAATCCA+AGG | + | chr2_4:54055405-54055424 | None:intergenic | 30.0% | |
| CTATCATCCATTTCAATACT+AGG | + | chr2_4:54055518-54055537 | None:intergenic | 30.0% | |
| GTCAAATTGGCAATTTAACA+TGG | - | chr2_4:54055719-54055738 | Msa0334960:intron | 30.0% | |
| ! | TTTTTATTGATGCCACTGAA+CGG | + | chr2_4:54055779-54055798 | None:intergenic | 30.0% |
| !!! | TGTATTTTTTCTTGTTGCAG+AGG | - | chr2_4:54055856-54055875 | Msa0334960:intron | 30.0% |
| TAATAAAAGGCAAGATAGTG+GGG | + | chr2_4:54055962-54055981 | None:intergenic | 30.0% | |
| AAGAGGAGAGGAATAATAAA+AGG | + | chr2_4:54055975-54055994 | None:intergenic | 30.0% | |
| AAGTTGAAAGACTCAAATTC+AGG | - | chr2_4:54056168-54056187 | Msa0334960:intron | 30.0% | |
| TTGAATTCTATCTACTATGC+AGG | - | chr2_4:54056372-54056391 | Msa0334960:intron | 30.0% | |
| !! | TGAAAGGCATTAACTTGTTT+GGG | + | chr2_4:54056546-54056565 | None:intergenic | 30.0% |
| !! | ATGAAAGGCATTAACTTGTT+TGG | + | chr2_4:54056547-54056566 | None:intergenic | 30.0% |
| TGGAATCCCAAAAAATTGTA+CGG | + | chr2_4:54056669-54056688 | None:intergenic | 30.0% | |
| ! | ATACAACTTTTAGGCCATAA+TGG | + | chr2_4:54056689-54056708 | None:intergenic | 30.0% |
| ! | GGTAAACGAATACAACTTTT+AGG | + | chr2_4:54056698-54056717 | None:intergenic | 30.0% |
| ! | ACTAAAAGGAAAGAGTGTAT+GGG | + | chr2_4:54056719-54056738 | None:intergenic | 30.0% |
| ! | AACTAAAAGGAAAGAGTGTA+TGG | + | chr2_4:54056720-54056739 | None:intergenic | 30.0% |
| ! | AGTACAGTAACATGTTACTT+TGG | - | chr2_4:54056876-54056895 | Msa0334960:five_prime_UTR | 30.0% |
| ! | AAAATTGTGAATTTTCCCGG+CGG | + | chr2_4:54054575-54054594 | None:intergenic | 35.0% |
| ! | CGGAAAATTGTGAATTTTCC+CGG | + | chr2_4:54054578-54054597 | None:intergenic | 35.0% |
| ! | CGGGAAAATTCACAATTTTC+CGG | - | chr2_4:54054576-54054595 | Msa0334960:three_prime_UTR | 35.0% |
| ! | GGGAAAATTCACAATTTTCC+GGG | - | chr2_4:54054577-54054596 | Msa0334960:three_prime_UTR | 35.0% |
| !!! | ATAGTTGGGTTGAATTTTCC+CGG | + | chr2_4:54054598-54054617 | None:intergenic | 35.0% |
| !! | AAAAGCCAATTGGTGTTTTC+CGG | + | chr2_4:54054628-54054647 | None:intergenic | 35.0% |
| !!! | TGCCCCTTTTTTCAAATTTG+TGG | - | chr2_4:54054779-54054798 | Msa0334960:CDS | 35.0% |
| TTGTGTACTTATGGTTATGG+TGG | - | chr2_4:54054925-54054944 | Msa0334960:CDS | 35.0% | |
| TAGTAGAACTTGAACTAGGA+TGG | - | chr2_4:54054953-54054972 | Msa0334960:CDS | 35.0% | |
| TGTTCTTGAATCTTCTGTTC+TGG | - | chr2_4:54055021-54055040 | Msa0334960:intron | 35.0% | |
| ! | ATCTTCTGTTCTGGATATGT+TGG | - | chr2_4:54055030-54055049 | Msa0334960:intron | 35.0% |
| CCCTTGTATTATGGAAAACT+AGG | - | chr2_4:54055292-54055311 | Msa0334960:CDS | 35.0% | |
| AAGGAATTGCCACAGTAATT+GGG | + | chr2_4:54055380-54055399 | None:intergenic | 35.0% | |
| AAAGGAATTGCCACAGTAAT+TGG | + | chr2_4:54055381-54055400 | None:intergenic | 35.0% | |
| TCAACTAACTTACAGCTTTG+AGG | - | chr2_4:54055684-54055703 | Msa0334960:intron | 35.0% | |
| TGAAGATAATTAGCGATAGC+AGG | - | chr2_4:54055751-54055770 | Msa0334960:intron | 35.0% | |
| ACAAGCAATAGGATTTGACA+GGG | + | chr2_4:54055806-54055825 | None:intergenic | 35.0% | |
| TACAAGCAATAGGATTTGAC+AGG | + | chr2_4:54055807-54055826 | None:intergenic | 35.0% | |
| ! | TATTCCTCTCCTCTTTTACT+CGG | - | chr2_4:54055980-54055999 | Msa0334960:intron | 35.0% |
| !! | GAAAGGCATTAACTTGTTTG+GGG | + | chr2_4:54056545-54056564 | None:intergenic | 35.0% |
| AATTGTACGGTTGCCAATTT+AGG | + | chr2_4:54056656-54056675 | None:intergenic | 35.0% | |
| !!! | TTGGCAACCGTACAATTTTT+TGG | - | chr2_4:54056659-54056678 | Msa0334960:CDS | 35.0% |
| !!! | TGGCAACCGTACAATTTTTT+GGG | - | chr2_4:54056660-54056679 | Msa0334960:CDS | 35.0% |
| CCAGCAACAAATATTAAAGC+CGG | + | chr2_4:54056852-54056871 | None:intergenic | 35.0% | |
| GAGGGTAGAGAAAAAAAGAG+TGG | + | chr2_4:54054419-54054438 | None:intergenic | 40.0% | |
| ! | TTTTTCTCTACCCTCAAACG+TGG | - | chr2_4:54054424-54054443 | Msa0334960:three_prime_UTR | 40.0% |
| AAATCTCATTTCTTCACCGC+CGG | - | chr2_4:54054556-54054575 | Msa0334960:three_prime_UTR | 40.0% | |
| GGGAAAATTCAACCCAACTA+TGG | - | chr2_4:54054597-54054616 | Msa0334960:three_prime_UTR | 40.0% | |
| !! | AAAGCCAATTGGTGTTTTCC+GGG | + | chr2_4:54054627-54054646 | None:intergenic | 40.0% |
| AGGGTAATCGAAAAGCCAAT+TGG | + | chr2_4:54054638-54054657 | None:intergenic | 40.0% | |
| !! | GAAATTCCTGTTTCTGTCGA+TGG | - | chr2_4:54054667-54054686 | Msa0334960:three_prime_UTR | 40.0% |
| ! | TTCTGTTCTGGATATGTTGG+TGG | - | chr2_4:54055033-54055052 | Msa0334960:intron | 40.0% |
| ! | TCTGTTCTGGATATGTTGGT+GGG | - | chr2_4:54055034-54055053 | Msa0334960:intron | 40.0% |
| ACATACACGAACACAAGACA+CGG | - | chr2_4:54055107-54055126 | Msa0334960:intron | 40.0% | |
| AACCTGCATCCCTTGTATTA+TGG | - | chr2_4:54055283-54055302 | Msa0334960:CDS | 40.0% | |
| TTCCATAATACAAGGGATGC+AGG | + | chr2_4:54055288-54055307 | None:intergenic | 40.0% | |
| AGGAATTGCCACAGTAATTG+GGG | + | chr2_4:54055379-54055398 | None:intergenic | 40.0% | |
| ! | CTCTGCTCCTAGTATTGAAA+TGG | - | chr2_4:54055508-54055527 | Msa0334960:intron | 40.0% |
| AATGGATGATAGCTCTCTAG+TGG | - | chr2_4:54055526-54055545 | Msa0334960:intron | 40.0% | |
| TCTGATGGTATCAAAGAACC+TGG | - | chr2_4:54055551-54055570 | Msa0334960:intron | 40.0% | |
| TTCTTGTTGCAGAGGTAGAT+CGG | - | chr2_4:54055864-54055883 | Msa0334960:intron | 40.0% | |
| TGGGTGTAGACTGTGTATTT+GGG | - | chr2_4:54056003-54056022 | Msa0334960:intron | 40.0% | |
| TGTTGAATTAGGCTCCATCT+TGG | - | chr2_4:54056059-54056078 | Msa0334960:intron | 40.0% | |
| ! | ATTGCTGCCTTGTCTGTTTT+AGG | + | chr2_4:54056099-54056118 | None:intergenic | 40.0% |
| ATGCCTTTCATGAGTTATCC+AGG | - | chr2_4:54056556-54056575 | Msa0334960:intron | 40.0% | |
| ACTCCTGGATAACTCATGAA+AGG | + | chr2_4:54056562-54056581 | None:intergenic | 40.0% | |
| ! | ATGATCTTGTGAGGTATCCA+CGG | + | chr2_4:54056614-54056633 | None:intergenic | 40.0% |
| ! | CCGGCTTTAATATTTGTTGC+TGG | - | chr2_4:54056849-54056868 | Msa0334960:five_prime_UTR | 40.0% |
| AATCTCATTTCTTCACCGCC+GGG | - | chr2_4:54054557-54054576 | Msa0334960:three_prime_UTR | 45.0% | |
| TTTCCGGGGAAACCATAGTT+GGG | + | chr2_4:54054612-54054631 | None:intergenic | 45.0% | |
| ! | TTTTCCGGGGAAACCATAGT+TGG | + | chr2_4:54054613-54054632 | None:intergenic | 45.0% |
| TTTCCCCGGAAAACACCAAT+TGG | - | chr2_4:54054620-54054639 | Msa0334960:three_prime_UTR | 45.0% | |
| !! | AAGCCAATTGGTGTTTTCCG+GGG | + | chr2_4:54054626-54054645 | None:intergenic | 45.0% |
| CAAAATCAGATACCCGCCAT+TGG | + | chr2_4:54054728-54054747 | None:intergenic | 45.0% | |
| ACACAGCATGTGTCAGTGTT+GGG | - | chr2_4:54055174-54055193 | Msa0334960:CDS | 45.0% | |
| ! | CTGAAGTGTCAGTGCTACAT+AGG | - | chr2_4:54055233-54055252 | Msa0334960:CDS | 45.0% |
| CAATTTGCACGAGCAGCTTA+AGG | + | chr2_4:54055261-54055280 | None:intergenic | 45.0% | |
| TGTAGAGACCCCAATTACTG+TGG | - | chr2_4:54055368-54055387 | Msa0334960:intron | 45.0% | |
| CTGTGGCAATTCCTTTACCT+TGG | - | chr2_4:54055385-54055404 | Msa0334960:intron | 45.0% | |
| !! | AGCTCTCTAGTGGATTCTGA+TGG | - | chr2_4:54055536-54055555 | Msa0334960:intron | 45.0% |
| ! | AAGAACCTGGTTCGAAGAAG+AGG | - | chr2_4:54055564-54055583 | Msa0334960:intron | 45.0% |
| AGTTACCTCTTCTTCGAACC+AGG | + | chr2_4:54055572-54055591 | None:intergenic | 45.0% | |
| GTGGGTGTAGACTGTGTATT+TGG | - | chr2_4:54056002-54056021 | Msa0334960:intron | 45.0% | |
| GGGTGTAGACTGTGTATTTG+GGG | - | chr2_4:54056004-54056023 | Msa0334960:intron | 45.0% | |
| AAGGCCACCTAAAACAGACA+AGG | - | chr2_4:54056089-54056108 | Msa0334960:intron | 45.0% | |
| TCTGATTGATGCTGTCCGAA+TGG | - | chr2_4:54056119-54056138 | Msa0334960:intron | 45.0% | |
| AACTTCGTGATGAGAAGCAG+AGG | - | chr2_4:54056407-54056426 | Msa0334960:intron | 45.0% | |
| TGATGAGAAGCAGAGGCTTA+AGG | - | chr2_4:54056414-54056433 | Msa0334960:intron | 45.0% | |
| TAAGGCTGAGAAGGAGAAGT+TGG | - | chr2_4:54056432-54056451 | Msa0334960:intron | 45.0% | |
| GTGTGTCAAGAAACTGGGTT+GGG | + | chr2_4:54056482-54056501 | None:intergenic | 45.0% | |
| CTTGATGAGCAAATGCAGCA+GGG | + | chr2_4:54056516-54056535 | None:intergenic | 45.0% | |
| !! | GCATTAACTTGTTTGGGGCT+TGG | + | chr2_4:54056540-54056559 | None:intergenic | 45.0% |
| ACGGAGTACATGATCTTGTG+AGG | + | chr2_4:54056623-54056642 | None:intergenic | 45.0% | |
| CAATTTAGGCAACTGGTGGA+CGG | + | chr2_4:54056642-54056661 | None:intergenic | 45.0% | |
| TTGCCAATTTAGGCAACTGG+TGG | + | chr2_4:54056646-54056665 | None:intergenic | 45.0% | |
| CTTGTTTGGCTGTCTTCTTC+CGG | - | chr2_4:54056830-54056849 | Msa0334960:five_prime_UTR | 45.0% | |
| !!! | TTTTTAATAATTTCTTTTAA+TGG | + | chr2_4:54054384-54054403 | None:intergenic | 5.0% |
| CAACCCAACTATGGTTTCCC+CGG | - | chr2_4:54054606-54054625 | Msa0334960:three_prime_UTR | 50.0% | |
| AAGGAGCCATCGACAGAAAC+AGG | + | chr2_4:54054676-54054695 | None:intergenic | 50.0% | |
| GACACAGCATGTGTCAGTGT+TGG | - | chr2_4:54055173-54055192 | Msa0334960:CDS | 50.0% | |
| ATGTGCTCCTTCCAGCTCTA+AGG | - | chr2_4:54055891-54055910 | Msa0334960:intron | 50.0% | |
| AGGCATGTCGAGAGAAGTTG+CGG | - | chr2_4:54055911-54055930 | Msa0334960:intron | 50.0% | |
| ATGTCGAGAGAAGTTGCGGA+GGG | - | chr2_4:54055915-54055934 | Msa0334960:intron | 50.0% | |
| ! | TCCTCTCCTCTTTTACTCGG+TGG | - | chr2_4:54055983-54056002 | Msa0334960:intron | 50.0% |
| ! | CCTCTCCTCTTTTACTCGGT+GGG | - | chr2_4:54055984-54056003 | Msa0334960:intron | 50.0% |
| CTACACCCACCGAGTAAAAG+AGG | + | chr2_4:54055992-54056011 | None:intergenic | 50.0% | |
| !! | TCTGTTTTAGGTGGCCTTCC+AGG | + | chr2_4:54056087-54056106 | None:intergenic | 50.0% |
| !! | GCTGCCTTGTCTGTTTTAGG+TGG | + | chr2_4:54056096-54056115 | None:intergenic | 50.0% |
| TCCGAATGGTGACACAGTTG+CGG | - | chr2_4:54056133-54056152 | Msa0334960:intron | 50.0% | |
| GGTGTGTCAAGAAACTGGGT+TGG | + | chr2_4:54056483-54056502 | None:intergenic | 50.0% | |
| ! | GGAGGGTGTGTCAAGAAACT+GGG | + | chr2_4:54056487-54056506 | None:intergenic | 50.0% |
| ! | AGGAGGGTGTGTCAAGAAAC+TGG | + | chr2_4:54056488-54056507 | None:intergenic | 50.0% |
| CCTTGATGAGCAAATGCAGC+AGG | + | chr2_4:54056517-54056536 | None:intergenic | 50.0% | |
| CCTGCTGCATTTGCTCATCA+AGG | - | chr2_4:54056514-54056533 | Msa0334960:intron | 50.0% | |
| GTTATCCAGGAGTTGCCATG+TGG | - | chr2_4:54056569-54056588 | Msa0334960:intron | 50.0% | |
| AATTGCCACATGGCAACTCC+TGG | + | chr2_4:54056577-54056596 | None:intergenic | 50.0% | |
| TGGTGGCATGAATTGCCACA+TGG | + | chr2_4:54056587-54056606 | None:intergenic | 50.0% | |
| ! | ATCTTGTGAGGTATCCACGG+CGG | + | chr2_4:54056611-54056630 | None:intergenic | 50.0% |
| CGTCCACCAGTTGCCTAAAT+TGG | - | chr2_4:54056640-54056659 | Msa0334960:intron | 50.0% | |
| CGGTTGCCAATTTAGGCAAC+TGG | + | chr2_4:54056649-54056668 | None:intergenic | 50.0% | |
| CCATTGGAGAGTTGAGGTGG+GGG | + | chr2_4:54054712-54054731 | None:intergenic | 55.0% | |
| GCCATTGGAGAGTTGAGGTG+GGG | + | chr2_4:54054713-54054732 | None:intergenic | 55.0% | |
| CGCCATTGGAGAGTTGAGGT+GGG | + | chr2_4:54054714-54054733 | None:intergenic | 55.0% | |
| CCACCTCAACTCTCCAATGG+CGG | - | chr2_4:54054712-54054731 | Msa0334960:exon | 55.0% | |
| CACCTCAACTCTCCAATGGC+GGG | - | chr2_4:54054713-54054732 | Msa0334960:exon | 55.0% | |
| TACCCGCCATTGGAGAGTTG+AGG | + | chr2_4:54054718-54054737 | None:intergenic | 55.0% | |
| CGACATGCCTTAGAGCTGGA+AGG | + | chr2_4:54055901-54055920 | None:intergenic | 55.0% | |
| CTCTCGACATGCCTTAGAGC+TGG | + | chr2_4:54055905-54055924 | None:intergenic | 55.0% | |
| CATGTCGAGAGAAGTTGCGG+AGG | - | chr2_4:54055914-54055933 | Msa0334960:intron | 55.0% | |
| GAGAGAAGTTGCGGAGGGAT+AGG | - | chr2_4:54055920-54055939 | Msa0334960:intron | 55.0% | |
| CCCACCGAGTAAAAGAGGAG+AGG | + | chr2_4:54055987-54056006 | None:intergenic | 55.0% | |
| TTAGGCTCCATCTTGGAGCC+TGG | - | chr2_4:54056066-54056085 | Msa0334960:intron | 55.0% | |
| CCCGCAACTGTGTCACCATT+CGG | + | chr2_4:54056137-54056156 | None:intergenic | 55.0% | |
| CCGAATGGTGACACAGTTGC+GGG | - | chr2_4:54056134-54056153 | Msa0334960:intron | 55.0% | |
| CGAATGGTGACACAGTTGCG+GGG | - | chr2_4:54056135-54056154 | Msa0334960:intron | 55.0% | |
| GCAGAGGCTTAAGGCTGAGA+AGG | - | chr2_4:54056423-54056442 | Msa0334960:intron | 55.0% | |
| GAAGGAGAAGTTGGAGCAGC+AGG | - | chr2_4:54056441-54056460 | Msa0334960:intron | 55.0% | |
| ATGCAGCAGGGATTGCAGGA+GGG | + | chr2_4:54056504-54056523 | None:intergenic | 55.0% | |
| AATGCAGCAGGGATTGCAGG+AGG | + | chr2_4:54056505-54056524 | None:intergenic | 55.0% | |
| GCAAATGCAGCAGGGATTGC+AGG | + | chr2_4:54056508-54056527 | None:intergenic | 55.0% | |
| ATGGCTCCTTCGCCTTCACG+TGG | - | chr2_4:54054686-54054705 | Msa0334960:three_prime_UTR | 60.0% | |
| CCCCCACCTCAACTCTCCAA+TGG | - | chr2_4:54054709-54054728 | Msa0334960:exon | 60.0% | |
| CCGCCATTGGAGAGTTGAGG+TGG | + | chr2_4:54054715-54054734 | None:intergenic | 60.0% | |
| CGATAGCAGGCTCCGTTCAG+TGG | - | chr2_4:54055764-54055783 | Msa0334960:intron | 60.0% | |
| GCTCCATCTTGGAGCCTGGA+AGG | - | chr2_4:54056070-54056089 | Msa0334960:intron | 60.0% | |
| TGGCCTTCCAGGCTCCAAGA+TGG | + | chr2_4:54056076-54056095 | None:intergenic | 60.0% | |
| TTGAGGTGGGGGCCACGTGA+AGG | + | chr2_4:54054701-54054720 | None:intergenic | 65.0% | |
| ATTCATGCCACCAGCCGCCG+TGG | - | chr2_4:54056594-54056613 | Msa0334960:intron | 65.0% | |
| ! | TGTGAGGTATCCACGGCGGC+TGG | + | chr2_4:54056607-54056626 | None:intergenic | 65.0% |
| TGGGGGCCACGTGAAGGCGA+AGG | + | chr2_4:54054695-54054714 | None:intergenic | 70.0% | |
| ! | GAGGTATCCACGGCGGCTGG+TGG | + | chr2_4:54056604-54056623 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 54054342 | 54057037 | 54054342 | ID=Msa0334960;Name=Msa0334960 |
| chr2_4 | mRNA | 54054342 | 54057037 | 54054342 | ID=Msa0334960-mRNA-1;Parent=Msa0334960;Name=Msa0334960-mRNA-1;_AED=0.05;_eAED=0.05;_QI=274|1|1|1|1|1|5|380|229 |
| chr2_4 | exon | 54054342 | 54054985 | 54054342 | ID=Msa0334960-mRNA-1:exon:16289;Parent=Msa0334960-mRNA-1 |
| chr2_4 | exon | 54055161 | 54055323 | 54055161 | ID=Msa0334960-mRNA-1:exon:16288;Parent=Msa0334960-mRNA-1 |
| chr2_4 | exon | 54055426 | 54055503 | 54055426 | ID=Msa0334960-mRNA-1:exon:16287;Parent=Msa0334960-mRNA-1 |
| chr2_4 | exon | 54055794 | 54055859 | 54055794 | ID=Msa0334960-mRNA-1:exon:16286;Parent=Msa0334960-mRNA-1 |
| chr2_4 | exon | 54056645 | 54057037 | 54056645 | ID=Msa0334960-mRNA-1:exon:16285;Parent=Msa0334960-mRNA-1 |
| chr2_4 | five_prime_UTR | 54056764 | 54057037 | 54056764 | ID=Msa0334960-mRNA-1:five_prime_utr;Parent=Msa0334960-mRNA-1 |
| chr2_4 | CDS | 54056645 | 54056763 | 54056645 | ID=Msa0334960-mRNA-1:cds;Parent=Msa0334960-mRNA-1 |
| chr2_4 | CDS | 54055794 | 54055859 | 54055794 | ID=Msa0334960-mRNA-1:cds;Parent=Msa0334960-mRNA-1 |
| chr2_4 | CDS | 54055426 | 54055503 | 54055426 | ID=Msa0334960-mRNA-1:cds;Parent=Msa0334960-mRNA-1 |
| chr2_4 | CDS | 54055161 | 54055323 | 54055161 | ID=Msa0334960-mRNA-1:cds;Parent=Msa0334960-mRNA-1 |
| chr2_4 | CDS | 54054722 | 54054985 | 54054722 | ID=Msa0334960-mRNA-1:cds;Parent=Msa0334960-mRNA-1 |
| chr2_4 | three_prime_UTR | 54054342 | 54054721 | 54054342 | ID=Msa0334960-mRNA-1:three_prime_utr;Parent=Msa0334960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
