AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1067980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1067980 MtrunA17_Chr7g0249221 94.737 418 1 1 1 397 1 418 0.0 807
Msa1067980 MtrunA17_Chr4g0066941 41.805 421 163 15 27 374 43 454 3.84e-81 258
Msa1067980 MtrunA17_Chr1g0195891 45.201 323 141 9 9 304 30 343 6.87e-80 249
Msa1067980 MtrunA17_Chr1g0195891 52.632 76 36 0 254 329 91 166 6.40e-19 87.4
Msa1067980 MtrunA17_Chr5g0438891 41.298 339 146 10 23 336 32 342 1.79e-79 250
Msa1067980 MtrunA17_Chr2g0286151 39.109 404 190 11 8 367 26 417 6.94e-77 246
Msa1067980 MtrunA17_Chr3g0116431 35.714 364 164 7 4 332 150 478 3.70e-66 218
Msa1067980 MtrunA17_Chr3g0116431 42.697 89 36 2 254 334 171 252 6.91e-14 73.2
Msa1067980 MtrunA17_Chr4g0058011 35.829 374 171 13 27 363 231 572 1.21e-61 208
Msa1067980 MtrunA17_Chr8g0356241 31.378 392 173 13 6 329 111 474 5.59e-44 159
Msa1067980 MtrunA17_Chr8g0356241 49.367 79 35 2 254 332 190 263 2.28e-17 84.0
Msa1067980 MtrunA17_Chr8g0356241 44.000 75 38 1 62 132 406 480 1.20e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1067980 AT3G02830.1 57.895 418 104 10 8 395 18 393 3.79e-158 451
Msa1067980 AT3G02830.2 57.831 415 103 10 11 395 1 373 1.94e-156 446
Msa1067980 AT5G16540.1 49.537 432 121 12 1 395 1 372 2.35e-132 384
Msa1067980 AT5G16540.3 50.852 411 116 11 11 395 1 351 1.49e-130 379
Msa1067980 AT5G16540.2 48.148 432 120 13 1 395 1 365 9.16e-125 365
Msa1067980 AT2G47850.1 47.185 373 150 10 2 345 23 377 2.17e-105 319
Msa1067980 AT2G47850.3 47.185 373 150 10 2 345 23 377 2.17e-105 319
Msa1067980 AT5G16540.4 51.097 319 81 8 11 304 1 269 2.94e-102 304
Msa1067980 AT5G16540.4 42.500 120 61 2 254 370 63 177 2.54e-21 93.2
Msa1067980 AT5G16540.4 41.053 95 49 2 254 342 18 111 4.14e-16 78.2
Msa1067980 AT5G18550.3 41.840 337 147 9 27 328 16 338 1.69e-83 261
Msa1067980 AT5G18550.3 30.556 144 63 5 62 171 276 416 5.61e-12 67.4
Msa1067980 AT5G18550.1 41.840 337 147 9 27 328 48 370 2.68e-83 262
Msa1067980 AT5G18550.1 30.556 144 63 5 62 171 308 448 5.36e-12 67.8
Msa1067980 AT5G18550.4 41.840 337 147 9 27 328 48 370 3.92e-83 261
Msa1067980 AT5G18550.4 30.556 144 63 5 62 171 308 448 6.50e-12 67.4
Msa1067980 AT3G06410.1 40.997 361 155 10 11 328 33 378 2.75e-78 249
Msa1067980 AT2G47850.2 41.803 366 142 12 8 345 29 351 3.19e-77 246
Msa1067980 AT5G18550.2 39.466 337 142 9 27 328 48 357 9.91e-76 242
Msa1067980 AT3G48440.1 40.805 348 143 11 19 330 99 419 3.05e-75 241
Msa1067980 AT3G48440.1 34.328 134 40 2 244 329 97 230 3.24e-16 80.5
Msa1067980 AT1G04990.1 39.244 344 154 8 8 330 25 334 2.81e-74 237
Msa1067980 AT1G04990.6 39.244 344 154 8 8 330 25 334 2.81e-74 237
Msa1067980 AT1G04990.2 39.244 344 154 8 8 330 25 334 2.81e-74 237
Msa1067980 AT2G47850.4 48.864 264 115 8 90 345 4 255 2.16e-73 233
Msa1067980 AT2G47850.4 42.000 100 34 1 27 126 164 239 3.63e-20 91.3
Msa1067980 AT2G32930.2 34.434 424 207 13 8 392 22 413 6.52e-66 217
Msa1067980 AT1G04990.5 37.209 344 141 9 8 330 25 314 9.97e-66 214
Msa1067980 AT2G32930.3 35.167 418 200 13 14 392 1 386 1.88e-65 215
Msa1067980 AT5G63260.1 37.572 346 167 7 27 345 98 421 3.71e-65 214
Msa1067980 AT5G63260.1 35.484 124 33 2 253 329 97 220 1.74e-15 78.2
Msa1067980 AT2G32930.1 34.286 420 209 13 8 392 22 409 3.83e-65 214
Msa1067980 AT5G63260.2 35.912 362 167 7 27 345 98 437 1.30e-62 208
Msa1067980 AT1G04990.3 40.590 271 125 6 62 330 17 253 7.13e-59 194
Msa1067980 AT1G04990.3 45.714 70 37 1 260 329 12 80 1.48e-14 74.3
Msa1067980 AT1G04990.3 26.199 271 140 10 38 283 17 252 2.09e-13 71.2
Msa1067980 AT1G04990.4 38.007 271 112 7 62 330 17 233 3.27e-50 171
Msa1067980 AT1G04990.4 45.714 70 37 1 260 329 12 80 8.66e-15 75.1
Msa1067980 AT3G12680.1 31.339 351 171 10 27 329 171 499 3.09e-47 169
Msa1067980 AT3G12680.1 31.217 189 46 4 20 126 260 446 1.68e-21 96.7
Msa1067980 AT3G12680.1 51.899 79 35 1 254 332 222 297 1.35e-19 90.9
Msa1067980 AT3G12680.1 32.778 180 79 5 247 394 258 427 2.23e-19 90.5
Msa1067980 AT3G12680.1 33.333 135 59 2 5 132 395 505 1.75e-18 87.8
Msa1067980 AT3G12680.1 42.857 84 39 3 253 329 170 251 2.83e-12 68.6
Msa1067980 AT1G48195.1 53.846 78 36 0 251 328 3 80 1.36e-25 99.4
Msa1067980 AT1G48195.1 39.423 104 39 2 22 125 1 80 2.98e-15 70.9

Find 178 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACTGGTCAATGCAAATT+TGG 0.130342 7_2:-62966066 Msa1067980:CDS
AAAACAGGAACTTGCAAATT+TGG 0.136623 7_2:-62966490 Msa1067980:CDS
CGGTATGGCATATGCAAATT+TGG 0.215054 7_2:-62963720 Msa1067980:CDS
GCAACCCCAGCCTTGTCTTT+AGG 0.238635 7_2:+62966445 None:intergenic
AAAGACAAGGCTGGGGTTGC+TGG 0.272337 7_2:-62966442 Msa1067980:CDS
GGGGCCTTGCCACCTTGGAC+TGG 0.285983 7_2:+62965891 None:intergenic
ACTCCTTGAGGTAGAATTAA+AGG 0.289469 7_2:+62965856 None:intergenic
AGAACCGGCCTTTGTAGATT+TGG 0.298865 7_2:-62968811 Msa1067980:CDS
TTATTCTTTGTTCTCATTTG+TGG 0.315569 7_2:-62970064 Msa1067980:five_prime_UTR
CAAGGAGTGGTTTCAGTGCC+TGG 0.319809 7_2:-62965841 Msa1067980:CDS
TTCTCTCTTGGTTGAGTTGA+GGG 0.324527 7_2:-62969907 Msa1067980:five_prime_UTR
TCATAAATATTTGTCACATT+TGG 0.326359 7_2:-62963259 Msa1067980:three_prime_UTR
CCTGATTCCATTGTTTCACT+TGG 0.338494 7_2:+62968880 None:intergenic
TGAATTGATTTCCCCATTGC+TGG 0.341453 7_2:-62963398 Msa1067980:three_prime_UTR
TTCATGTAGAATTGGCATTC+AGG 0.344518 7_2:+62964975 None:intergenic
TTCATTATTCTAGGGTCAAA+TGG 0.349387 7_2:-62965174 Msa1067980:intron
CCATCCTCAACCAAGTAATA+TGG 0.367721 7_2:-62966025 Msa1067980:CDS
GTTGGCAAATCCAGTCGTTC+TGG 0.368904 7_2:-62963309 Msa1067980:three_prime_UTR
CCCCAGTCTTCATGTAGAAT+TGG 0.370124 7_2:+62964967 None:intergenic
CACAATAATAAATACTTCAT+TGG 0.372039 7_2:+62962973 None:intergenic
AGAAACAGTTATAGATAGAT+TGG 0.373070 7_2:-62970121 Msa1067980:five_prime_UTR
GATGGTCAAACTTGCAGCTT+GGG 0.376214 7_2:+62963697 None:intergenic
GGGCCTTGCCACCTTGGACT+GGG 0.379660 7_2:+62965892 None:intergenic
AGGTGATGCAGATACATTAT+AGG 0.382033 7_2:+62963659 None:intergenic
GAACTGGTCAATGCAAATTT+GGG 0.387377 7_2:-62966065 Msa1067980:CDS
ATAATGTTGTCTCTTGGAAA+TGG 0.390974 7_2:-62963469 Msa1067980:exon
TGTGCTTATTATTTAAGAAC+TGG 0.391344 7_2:-62966081 Msa1067980:CDS
TTTGACATGAACTCTGTGTT+TGG 0.391786 7_2:+62963361 None:intergenic
TGCCAACTGCATTCAATAGT+AGG 0.395511 7_2:+62963325 None:intergenic
GTATATTCTCAATACCGTTC+TGG 0.396199 7_2:-62965062 Msa1067980:CDS
GACTGGACAGTAGGATAAAC+AGG 0.398708 7_2:+62965982 None:intergenic
CGTTAAAGAAAAGGATTTGC+TGG 0.401745 7_2:+62963113 None:intergenic
GGTTTAATCATCCTCCTAAC+AGG 0.403742 7_2:-62968777 Msa1067980:CDS
GTTCGTACCAGCTTCCTGTT+AGG 0.404770 7_2:+62968763 None:intergenic
AGGGGACTCAAAACACAATC+AGG 0.404981 7_2:+62964885 None:intergenic
CTCTGTACATCTCCAGCAAT+GGG 0.406575 7_2:+62963386 None:intergenic
AAGACTGGGGATTGCAAGTT+CGG 0.406993 7_2:-62964954 Msa1067980:CDS
TTACAGTACTATCTGAAAAC+AGG 0.407139 7_2:-62966505 Msa1067980:intron
ATATATAATAAATCAATGTT+TGG 0.409540 7_2:-62963152 Msa1067980:three_prime_UTR
AATTGGCATTCAGGCTGATC+AGG 0.416142 7_2:+62964984 None:intergenic
TGCAATGGCAAGCCAACATT+AGG 0.418386 7_2:-62963046 Msa1067980:three_prime_UTR
CAACTGTTTCGTTAAAGAAA+AGG 0.419546 7_2:+62963104 None:intergenic
CACTTTGTGTATTCTATTCG+CGG 0.422525 7_2:-62963740 Msa1067980:CDS
CTTGGTTGAGTTGAGGGTGG+AGG 0.426121 7_2:-62969901 Msa1067980:five_prime_UTR
GAGACTAGACCGAATCCTTC+CGG 0.432361 7_2:-62963516 Msa1067980:CDS
TCAGGCTGATCAGGTCTCTC+TGG 0.434727 7_2:+62964993 None:intergenic
ATCATCCTAAAGACAAGGCT+GGG 0.436765 7_2:-62966450 Msa1067980:CDS
ATGCGGCAGGAATTACAAAT+TGG 0.438347 7_2:-62965933 Msa1067980:CDS
CTTGAGGGGCCTTGCCACCT+TGG 0.438502 7_2:+62965886 None:intergenic
GCCGCAGGACGGCGTCTGCT+AGG 0.441580 7_2:-62963627 Msa1067980:CDS
AATGGAATCAGGACCGTATC+CGG 0.442898 7_2:-62968869 Msa1067980:CDS
CGTCCTGCGGCTTCAGCTAA+AGG 0.445120 7_2:+62963639 None:intergenic
TGTGTATTCTATTCGCGGTA+TGG 0.447990 7_2:-62963735 Msa1067980:CDS
TGCAAAGCATAGAATCCTAC+TGG 0.461939 7_2:+62965032 None:intergenic
TTGAGGGTGGAGGTTGATCT+CGG 0.463280 7_2:-62969891 Msa1067980:five_prime_UTR
TATATGCCGCATCGCATCAA+TGG 0.463698 7_2:-62969764 Msa1067980:exon
ATTGGAAGTACCATATTACT+TGG 0.463756 7_2:+62966015 None:intergenic
AAGGATATTGATCCTAATGT+TGG 0.464076 7_2:+62963034 None:intergenic
TGCCAATTCTACATGAAGAC+TGG 0.464264 7_2:-62964969 Msa1067980:CDS
TCATCATCACCGGAAGGATT+CGG 0.466357 7_2:+62963507 None:intergenic
CCAAGTGAAACAATGGAATC+AGG 0.466799 7_2:-62968880 Msa1067980:CDS
TGTTCATATTACATAAGAAC+CGG 0.466818 7_2:-62968826 Msa1067980:CDS
CTTATGTAATATGAACAATC+TGG 0.467160 7_2:+62968832 None:intergenic
TCATTTCTCATTGTTTGTTG+TGG 0.469765 7_2:+62965140 None:intergenic
TAATGTTGTCTCTTGGAAAT+GGG 0.470925 7_2:-62963468 Msa1067980:three_prime_UTR
TCATTATTCTAGGGTCAAAT+GGG 0.471117 7_2:-62965173 Msa1067980:intron
TATGAACAATCTGGTTCTCC+AGG 0.476295 7_2:+62968841 None:intergenic
TCTCCAGGATGCTCCGGATA+CGG 0.476462 7_2:+62968856 None:intergenic
TCTGATAATGAAAGCCTCCT+TGG 0.480995 7_2:+62963537 None:intergenic
CCAGAAAATGCAGGACTCCC+AGG 0.485002 7_2:-62965086 Msa1067980:CDS
ATTAAAGGTGCATAACTTGA+GGG 0.486909 7_2:+62965871 None:intergenic
TTCTTTGTTCTCATTTGTGG+AGG 0.495948 7_2:-62970061 Msa1067980:five_prime_UTR
CATCATCCTAAAGACAAGGC+TGG 0.496258 7_2:-62966451 Msa1067980:CDS
AAGGAGTGGTTTCAGTGCCT+GGG 0.496753 7_2:-62965840 Msa1067980:CDS
TTTCTCTCTTGGTTGAGTTG+AGG 0.497025 7_2:-62969908 Msa1067980:five_prime_UTR
ATGAGATGAGGTTGGTTGGT+TGG 0.498789 7_2:-62970090 Msa1067980:five_prime_UTR
GCAAATTTGGAGCCACATGC+AGG 0.499420 7_2:-62966477 Msa1067980:CDS
ATGAGAAATGATCAAACCTA+TGG 0.501705 7_2:-62965128 Msa1067980:CDS
GGATGGTCAAACTTGCAGCT+TGG 0.504043 7_2:+62963696 None:intergenic
CGGTATTGAGAATATACCCC+TGG 0.505547 7_2:+62965068 None:intergenic
GACTGCTGACCTGCTGTAGT+TGG 0.505631 7_2:+62965958 None:intergenic
TAAACAGGAGAACCTCTCAT+TGG 0.506558 7_2:+62965997 None:intergenic
TCTGGTTCTCCAGGATGCTC+CGG 0.509312 7_2:+62968850 None:intergenic
TGGATAGCCTAAAATATTCA+AGG 0.511388 7_2:+62966411 None:intergenic
CGTCTGCTAGGTTCTTCATC+AGG 0.511541 7_2:-62963615 Msa1067980:CDS
AGTTTGTGAGTGTGACAGAC+AGG 0.516203 7_2:-62969814 Msa1067980:five_prime_UTR
GGACCGTATCCGGAGCATCC+TGG 0.519002 7_2:-62968859 Msa1067980:CDS
AGGATTCTATGCTTTGCAAA+GGG 0.522548 7_2:-62965027 Msa1067980:CDS
TCAGAAGGACTTGTTGAGTC+GGG 0.523918 7_2:-62963570 Msa1067980:CDS
TGCTCCAAATCTACAAAGGC+CGG 0.524252 7_2:+62968807 None:intergenic
TCTCTTGGTTGAGTTGAGGG+TGG 0.525048 7_2:-62969904 Msa1067980:five_prime_UTR
AGTACCATATTACTTGGTTG+AGG 0.526229 7_2:+62966021 None:intergenic
AACCTACTATTGAATGCAGT+TGG 0.529624 7_2:-62963327 Msa1067980:three_prime_UTR
TGAGGGATAATGTTGTCTCT+TGG 0.536943 7_2:-62963475 Msa1067980:exon
AACTGAAGAAATGTTCACAT+TGG 0.537104 7_2:+62963229 None:intergenic
CAGGACGCAAAGGAAGGCCA+AGG 0.538208 7_2:+62964865 None:intergenic
TGTATAGAAATTTGTTGCAA+TGG 0.538257 7_2:-62963061 Msa1067980:three_prime_UTR
CCATATTACTTGGTTGAGGA+TGG 0.539028 7_2:+62966025 None:intergenic
AAAAGAGAAGAGAACCTTGA+GGG 0.541426 7_2:+62969728 None:intergenic
GCCAATTCTACATGAAGACT+GGG 0.541639 7_2:-62964968 Msa1067980:CDS
TGCAAGTTTGACCATCCAAT+GGG 0.542643 7_2:-62963690 Msa1067980:CDS
CGTACCAGCTTCCTGTTAGG+AGG 0.546788 7_2:+62968766 None:intergenic
AGGTGAAGATTCCCATTGGA+TGG 0.548300 7_2:+62963679 None:intergenic
GACCTGCTGTAGTTGGAGAC+TGG 0.551761 7_2:+62965965 None:intergenic
CGTTCTGGCTCTGTTCCAGT+AGG 0.552611 7_2:-62965047 Msa1067980:CDS
ATCATCAATGTCATCATCAC+CGG 0.554108 7_2:+62963497 None:intergenic
GGTCAGCAGTCATATGCGGC+AGG 0.561665 7_2:-62965946 Msa1067980:CDS
CAGAAAATGCAGGACTCCCA+GGG 0.561675 7_2:-62965085 Msa1067980:CDS
TCATCCTCCTAACAGGAAGC+TGG 0.561961 7_2:-62968770 Msa1067980:intron
ATCAGAAGGACTTGTTGAGT+CGG 0.563006 7_2:-62963571 Msa1067980:CDS
TAGGATTCTATGCTTTGCAA+AGG 0.563647 7_2:-62965028 Msa1067980:CDS
ACTCTGTACATCTCCAGCAA+TGG 0.565187 7_2:+62963385 None:intergenic
GCATTAAGTTTATCATCAGA+AGG 0.566420 7_2:-62963585 Msa1067980:CDS
AGCATGAAATCCAGAACGAC+TGG 0.570834 7_2:+62963299 None:intergenic
CTTGAGGCCAAGTGAAACAA+TGG 0.571072 7_2:-62968887 Msa1067980:CDS
CTCAAAACACAATCAGGGGC+AGG 0.571149 7_2:+62964891 None:intergenic
TTTAATTCTACCTCAAGGAG+TGG 0.571343 7_2:-62965854 Msa1067980:CDS
TGAGGGTGGAGGTTGATCTC+GGG 0.573732 7_2:-62969890 Msa1067980:five_prime_UTR
CGCGAATAGAATACACAAAG+TGG 0.573840 7_2:+62963741 None:intergenic
GCACCTTTAATTCTACCTCA+AGG 0.574609 7_2:-62965859 Msa1067980:CDS
CTGCAAGTTTGACCATCCAA+TGG 0.575545 7_2:-62963691 Msa1067980:CDS
GTCCAGTCTCCAACTACAGC+AGG 0.575929 7_2:-62965967 Msa1067980:CDS
GAATCGTCCTCTCACGTGGA+TGG 0.576252 7_2:+62964913 None:intergenic
AATTAAAGGTGCATAACTTG+AGG 0.578502 7_2:+62965870 None:intergenic
ATAGATGAGATGAGGTTGGT+TGG 0.578888 7_2:-62970094 Msa1067980:five_prime_UTR
ATAGATAGATGAGATGAGGT+TGG 0.579059 7_2:-62970098 Msa1067980:five_prime_UTR
TCACCTTTAGCTGAAGCCGC+AGG 0.584776 7_2:-62963642 Msa1067980:CDS
GGGGACTCAAAACACAATCA+GGG 0.586867 7_2:+62964886 None:intergenic
TTATAGGTGAAGATTCCCAT+TGG 0.587312 7_2:+62963675 None:intergenic
ATTCCCAGTCCAAGGTGGCA+AGG 0.587489 7_2:-62965895 Msa1067980:CDS
GAGAAGAGAACCTTGAGGGA+TGG 0.594361 7_2:+62969732 None:intergenic
CAAGGTGATCCAGAAAATGC+AGG 0.595566 7_2:-62965095 Msa1067980:CDS
TTGGATAGATAGATGAGATG+AGG 0.596392 7_2:-62970102 Msa1067980:five_prime_UTR
AGGACGCAAAGGAAGGCCAA+GGG 0.598969 7_2:+62964866 None:intergenic
GTAGTTGGAGACTGGACAGT+AGG 0.599936 7_2:+62965973 None:intergenic
AAGAGTGAGTTAACAAAACG+TGG 0.605140 7_2:-62969844 Msa1067980:five_prime_UTR
CATCATATATTCCCAGTCCA+AGG 0.605376 7_2:-62965903 Msa1067980:CDS
AACTCACAGGACGCAAAGGA+AGG 0.607839 7_2:+62964859 None:intergenic
CAATGTGGCAAATGAGCTTG+AGG 0.610902 7_2:-62968903 Msa1067980:CDS
GAATACGATGCCATCCCTCA+AGG 0.613701 7_2:-62969742 Msa1067980:intron
GCAGGAATCGTCCTCTCACG+TGG 0.617223 7_2:+62964909 None:intergenic
ACCTTGGTGAGAAGTTCCAT+AGG 0.618037 7_2:+62965112 None:intergenic
TGATGATGACATTGATGATG+AGG 0.621578 7_2:-62963493 Msa1067980:CDS
TATCAACTCACAGGACGCAA+AGG 0.625938 7_2:+62964855 None:intergenic
ACCTAGCAGACGCCGTCCTG+CGG 0.633483 7_2:+62963626 None:intergenic
GAGTGGTTTCAGTGCCTGGG+TGG 0.634998 7_2:-62965837 Msa1067980:CDS
AGTCGGGCTCAGTAAAGCCA+AGG 0.638264 7_2:-62963554 Msa1067980:CDS
ATTTGCTGGAAGATTCACAC+TGG 0.639436 7_2:+62963127 None:intergenic
CTACTGGAACAGAGCCAGAA+CGG 0.644056 7_2:+62965048 None:intergenic
TTGGTATTTCAGAGGCAATG+TGG 0.648210 7_2:-62968918 Msa1067980:intron
AGCAGGTCAGCAGTCATATG+CGG 0.648949 7_2:-62965950 Msa1067980:CDS
CTTTAGCTGAAGCCGCAGGA+CGG 0.650765 7_2:-62963638 Msa1067980:CDS
GGCACTGAAACCACTCCTTG+AGG 0.654184 7_2:+62965844 None:intergenic
GTAGATTTGGAGCAACATGT+CGG 0.656899 7_2:-62968798 Msa1067980:CDS
TCATCCTAAAGACAAGGCTG+GGG 0.657086 7_2:-62966449 Msa1067980:CDS
AATATGGTACTTCCAATGAG+AGG 0.663744 7_2:-62966009 Msa1067980:CDS
TTAAAGGTGCATAACTTGAG+GGG 0.664735 7_2:+62965872 None:intergenic
AGAGTGAGTTAACAAAACGT+GGG 0.665229 7_2:-62969843 Msa1067980:five_prime_UTR
TCAATGTCATCATCACCGGA+AGG 0.666162 7_2:+62963501 None:intergenic
GGGACTCAAAACACAATCAG+GGG 0.668670 7_2:+62964887 None:intergenic
TGAATACTAACTGGGCGGAG+TGG 0.668928 7_2:+62966391 None:intergenic
GGTATTGAGAATATACCCCT+GGG 0.672817 7_2:+62965069 None:intergenic
GGACGCAAAGGAAGGCCAAG+GGG 0.673705 7_2:+62964867 None:intergenic
CATATATTCCCAGTCCAAGG+TGG 0.674314 7_2:-62965900 Msa1067980:CDS
ACCTATGGAACTTCTCACCA+AGG 0.676965 7_2:-62965113 Msa1067980:CDS
ATGTTGCTCCAAATCTACAA+AGG 0.680968 7_2:+62968803 None:intergenic
GATGATGACATTGATGATGA+GGG 0.686486 7_2:-62963492 Msa1067980:CDS
GTTTCATCATCCTAAAGACA+AGG 0.693217 7_2:-62966455 Msa1067980:CDS
CGGGCTCAGTAAAGCCAAGG+AGG 0.694995 7_2:-62963551 Msa1067980:CDS
GAGTGAGTTAACAAAACGTG+GGG 0.698884 7_2:-62969842 Msa1067980:five_prime_UTR
CGTATTCCATTGATGCGATG+CGG 0.699906 7_2:+62969758 None:intergenic
ACATTGTATGTACTCCACCC+AGG 0.709130 7_2:+62965823 None:intergenic
CCAATTCTACATGAAGACTG+GGG 0.719635 7_2:-62964967 Msa1067980:CDS
AGGATGATGAAACCTGCATG+TGG 0.722276 7_2:+62966465 None:intergenic
AGAAAATGCAGGACTCCCAG+GGG 0.722646 7_2:-62965084 Msa1067980:CDS
TCTGTACATCTCCAGCAATG+GGG 0.726457 7_2:+62963387 None:intergenic
GTTTGTGAGTGTGACAGACA+GGG 0.735791 7_2:-62969813 Msa1067980:five_prime_UTR
TGTGAGTGTGACAGACAGGG+CGG 0.805451 7_2:-62969810 Msa1067980:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATGTTTAAAAAAAATAATT+TGG + chr7_2:62963827-62963846 None:intergenic 10.0%
!! AAATTTATTATGAATGTATT+TGG - chr7_2:62964405-62964424 Msa1067980:intron 10.0%
!! TAGACTATTAATTAATATTA+AGG + chr7_2:62966972-62966991 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTGCAA+AGG + chr7_2:62968481-62968500 None:intergenic 10.0%
!! TGATAAAATGTTAAAAAAAA+AGG + chr7_2:62968793-62968812 None:intergenic 10.0%
!!! AAAATAATAACAGATATTTT+GGG + chr7_2:62969176-62969195 None:intergenic 10.0%
!! ATATATAATAAATCAATGTT+TGG - chr7_2:62969962-62969981 Msa1067980:five_prime_UTR 10.0%
!!! TTTTGATTGTGATAATAAAA+AGG + chr7_2:62963144-62963163 None:intergenic 15.0%
!! ATGATTAAAAAAACAATTGT+TGG + chr7_2:62963770-62963789 None:intergenic 15.0%
!! AATATTCAAAGATGAAAAAA+TGG + chr7_2:62963903-62963922 None:intergenic 15.0%
!! GATATAACTATAAATTCAAA+GGG + chr7_2:62965085-62965104 None:intergenic 15.0%
!!! TCATTACAAATAAGTTTTAT+AGG - chr7_2:62965425-62965444 Msa1067980:intron 15.0%
!! ATATGTAAACTTATTATTAG+AGG - chr7_2:62965692-62965711 Msa1067980:intron 15.0%
!! ATAGAAATAAACATTCATAT+GGG + chr7_2:62965960-62965979 None:intergenic 15.0%
!! AATAGAAATAAACATTCATA+TGG + chr7_2:62965961-62965980 None:intergenic 15.0%
!! CAATTCAAATTTCTAATAAA+AGG - chr7_2:62965987-62966006 Msa1067980:CDS 15.0%
!!! CTTTTATTAGGATATTTTTT+AGG + chr7_2:62966016-62966035 None:intergenic 15.0%
!!! TAACATCATTATCTTTTATT+AGG + chr7_2:62966028-62966047 None:intergenic 15.0%
!! AGATATCAATATTTGTAATA+TGG + chr7_2:62966579-62966598 None:intergenic 15.0%
!! CATAGTATAAAAAGTTTATA+CGG + chr7_2:62966855-62966874 None:intergenic 15.0%
!! TACTTCATTATAATTATCAT+AGG - chr7_2:62968344-62968363 Msa1067980:intron 15.0%
!! TAAAATTAATACTTCTATGT+TGG - chr7_2:62968901-62968920 Msa1067980:CDS 15.0%
!!! GAAAATAATAACAGATATTT+TGG + chr7_2:62969177-62969196 None:intergenic 15.0%
!!! GTTTTACAATTTTTTTCTTA+GGG - chr7_2:62969677-62969696 Msa1067980:intron 15.0%
!!! TTTTACAATTTTTTTCTTAG+GGG - chr7_2:62969678-62969697 Msa1067980:intron 15.0%
!!! ATCAATATCCTTAATTTTTT+TGG - chr7_2:62970091-62970110 Msa1067980:five_prime_UTR 15.0%
!! CAAAAAAAAAAAAAGGTAGT+TGG + chr7_2:62963512-62963531 None:intergenic 20.0%
!!! TGAATTACTAGTTTGAAAAA+AGG + chr7_2:62963648-62963667 None:intergenic 20.0%
!! AAAATTAGCAGAAAATTGAA+AGG + chr7_2:62963680-62963699 None:intergenic 20.0%
!! GTTATAGATTTAACATTAGA+TGG + chr7_2:62964756-62964775 None:intergenic 20.0%
!! TGGACATAATTAGATAATAT+AGG - chr7_2:62964805-62964824 Msa1067980:intron 20.0%
!! TAAAATTCCATCTATGAAAT+AGG + chr7_2:62964994-62965013 None:intergenic 20.0%
!! GGATATAACTATAAATTCAA+AGG + chr7_2:62965086-62965105 None:intergenic 20.0%
!!! ATATTTGTTATTCCTAGATA+GGG + chr7_2:62965676-62965695 None:intergenic 20.0%
!! CAGAGATAATAATACAAAAA+TGG + chr7_2:62966203-62966222 None:intergenic 20.0%
!! GTAATTACATATAAACAAGA+GGG + chr7_2:62966755-62966774 None:intergenic 20.0%
!! TGTAATTACATATAAACAAG+AGG + chr7_2:62966756-62966775 None:intergenic 20.0%
!! ATGAGTAATGAAACAATAAT+TGG + chr7_2:62966810-62966829 None:intergenic 20.0%
!! TTATTGTTTCATTACTCATT+TGG - chr7_2:62966811-62966830 Msa1067980:intron 20.0%
!!! TTTAAATTTTGAGTTTGCTA+AGG - chr7_2:62968368-62968387 Msa1067980:intron 20.0%
!! AAATAACTGACAAAAGTAAA+GGG + chr7_2:62968504-62968523 None:intergenic 20.0%
!!! CGTTTTACAATTTTTTTCTT+AGG - chr7_2:62969676-62969695 Msa1067980:intron 20.0%
!! TCATAAATATTTGTCACATT+TGG - chr7_2:62969855-62969874 Msa1067980:five_prime_UTR 20.0%
!!! AGTATTTTCAATAGATAGAT+TGG + chr7_2:62969914-62969933 None:intergenic 20.0%
!! AAGATTGTCCAAAAAAATTA+AGG + chr7_2:62970102-62970121 None:intergenic 20.0%
!! CACAATAATAAATACTTCAT+TGG + chr7_2:62970144-62970163 None:intergenic 20.0%
! AGAAACAGTTATAGATAGAT+TGG - chr7_2:62962993-62963012 Msa1067980:three_prime_UTR 25.0%
! TTATTCTTTGTTCTCATTTG+TGG - chr7_2:62963050-62963069 Msa1067980:three_prime_UTR 25.0%
!! AATAATTGTGTTTTCTCTCT+TGG - chr7_2:62963195-62963214 Msa1067980:three_prime_UTR 25.0%
! TTGGTTTATCATGAAATCAA+CGG + chr7_2:62963808-62963827 None:intergenic 25.0%
!!! TTAACTTTTTCATTACACAG+TGG - chr7_2:62964004-62964023 Msa1067980:intron 25.0%
!!! TAACTTTTTCATTACACAGT+GGG - chr7_2:62964005-62964024 Msa1067980:intron 25.0%
! ATGGTTATGTATCTGAAAAA+TGG + chr7_2:62964079-62964098 None:intergenic 25.0%
! CTTATGTAATATGAACAATC+TGG + chr7_2:62964285-62964304 None:intergenic 25.0%
! TGTTCATATTACATAAGAAC+CGG - chr7_2:62964288-62964307 Msa1067980:intron 25.0%
! CTTGGAAATTAGTGATAATA+AGG + chr7_2:62964489-62964508 None:intergenic 25.0%
! CTTATTATCACTAATTTCCA+AGG - chr7_2:62964487-62964506 Msa1067980:intron 25.0%
!!! ATAGAAAAGTATCAACAAGA+CGG + chr7_2:62964780-62964799 None:intergenic 25.0%
!! TTGATACTTTTCTATTTGAC+TGG - chr7_2:62964785-62964804 Msa1067980:intron 25.0%
!! GTTTTACTTCAAATATTGTC+AGG - chr7_2:62964838-62964857 Msa1067980:intron 25.0%
!! TTTAGGAGTTATCTTTTAAC+GGG + chr7_2:62965124-62965143 None:intergenic 25.0%
!!! CTTTAGGAGTTATCTTTTAA+CGG + chr7_2:62965125-62965144 None:intergenic 25.0%
! AAAGATAACTCCTAAAGTAT+AGG - chr7_2:62965128-62965147 Msa1067980:CDS 25.0%
! AAGATAACTCCTAAAGTATA+GGG - chr7_2:62965129-62965148 Msa1067980:CDS 25.0%
! AACTCATTAGATGAACTATA+AGG + chr7_2:62965280-62965299 None:intergenic 25.0%
!!! TATTTGTTATTCCTAGATAG+GGG + chr7_2:62965675-62965694 None:intergenic 25.0%
!!! CATATTTGTTATTCCTAGAT+AGG + chr7_2:62965677-62965696 None:intergenic 25.0%
! TAGTAAAGTTATACAGCATT+TGG + chr7_2:62965765-62965784 None:intergenic 25.0%
! TTGTCCAAATTGTCTATATA+TGG + chr7_2:62965823-62965842 None:intergenic 25.0%
! ATATAGACAATTTGGACAAA+TGG - chr7_2:62965824-62965843 Msa1067980:intron 25.0%
! TTGTTTGAAAGTAGTGTATT+TGG - chr7_2:62966248-62966267 Msa1067980:intron 25.0%
! TGTTTGAAAGTAGTGTATTT+GGG - chr7_2:62966249-62966268 Msa1067980:intron 25.0%
!!! TTTTTAAGTAATTAGCACAC+TGG + chr7_2:62966416-62966435 None:intergenic 25.0%
! AATAGATCTTAAGAGAAACA+TGG + chr7_2:62966446-62966465 None:intergenic 25.0%
!! GGAAATTTTGAATACTAACT+GGG + chr7_2:62966734-62966753 None:intergenic 25.0%
!!! CTCTGTTTTTCTAAAATTTG+TGG - chr7_2:62966900-62966919 Msa1067980:intron 25.0%
!! GTAATAAATAGAAGCATACA+AGG + chr7_2:62966926-62966945 None:intergenic 25.0%
!!! TACCTTACCTGAATTTTTTA+TGG - chr7_2:62966943-62966962 Msa1067980:intron 25.0%
!!! ACCTTACCTGAATTTTTTAT+GGG - chr7_2:62966944-62966963 Msa1067980:intron 25.0%
! TGTGCTTATTATTTAAGAAC+TGG - chr7_2:62967033-62967052 Msa1067980:intron 25.0%
! TGCATTAAATTAGAGGTTAA+AGG + chr7_2:62967811-62967830 None:intergenic 25.0%
! ACCTCTAATTTAATGCAATA+TGG - chr7_2:62967814-62967833 Msa1067980:intron 25.0%
! CAAATAACTGACAAAAGTAA+AGG + chr7_2:62968505-62968524 None:intergenic 25.0%
! ATATCTCTACTAAAATCGTA+GGG + chr7_2:62968563-62968582 None:intergenic 25.0%
! TATATCTCTACTAAAATCGT+AGG + chr7_2:62968564-62968583 None:intergenic 25.0%
! AAGATTGATTATAACTTCTC+TGG - chr7_2:62968716-62968735 Msa1067980:intron 25.0%
!! ATTGTATGATGATAACTTGT+TGG - chr7_2:62968767-62968786 Msa1067980:intron 25.0%
! AGTAAACATTGACCTTTAAT+TGG - chr7_2:62969219-62969238 Msa1067980:intron 25.0%
! GTAAACATTGACCTTTAATT+GGG - chr7_2:62969220-62969239 Msa1067980:intron 25.0%
!!! CAGAAAGATATTTTTTACAC+TGG + chr7_2:62969939-62969958 None:intergenic 25.0%
! CAGTGTAAAAAATATCTTTC+TGG - chr7_2:62969937-62969956 Msa1067980:five_prime_UTR 25.0%
!! TTTTCTTTAACGAAACAGTT+GGG - chr7_2:62970012-62970031 Msa1067980:five_prime_UTR 25.0%
!!! TGTATAGAAATTTGTTGCAA+TGG - chr7_2:62970053-62970072 Msa1067980:five_prime_UTR 25.0%
TTGAAGAATTAAGCGATGAT+CGG + chr7_2:62963423-62963442 None:intergenic 30.0%
!! CTTTTGAAAAGTCGTACAAA+GGG - chr7_2:62963980-62963999 Msa1067980:intron 30.0%
!! TTTTGAAAAGTCGTACAAAG+GGG - chr7_2:62963981-62964000 Msa1067980:intron 30.0%
!!! AACTTTTTCATTACACAGTG+GGG - chr7_2:62964006-62964025 Msa1067980:intron 30.0%
!!! AAATTGACTTGTACGTGTTT+TGG - chr7_2:62964177-62964196 Msa1067980:intron 30.0%
TACGAACTATGCATTTCATA+TGG - chr7_2:62964367-62964386 Msa1067980:intron 30.0%
CAGTTGAAACTGAAACTATT+TGG - chr7_2:62964526-62964545 Msa1067980:intron 30.0%
GAAAGCAGTGAAAAGAAATT+TGG + chr7_2:62964703-62964722 None:intergenic 30.0%
GTGAATTCCTATTTCATAGA+TGG - chr7_2:62964984-62965003 Msa1067980:CDS 30.0%
!! CATGAAATCTTTAGAACACT+TGG - chr7_2:62965033-62965052 Msa1067980:CDS 30.0%
!! AATCTTTAGAACACTTGGAA+TGG - chr7_2:62965038-62965057 Msa1067980:CDS 30.0%
!! ATCTTTAGAACACTTGGAAT+GGG - chr7_2:62965039-62965058 Msa1067980:CDS 30.0%
TATGGGATAAAGTGTAACTA+TGG + chr7_2:62965326-62965345 None:intergenic 30.0%
ACACTTTATCCCATATAAGA+TGG - chr7_2:62965331-62965350 Msa1067980:intron 30.0%
TAGATGTTGAATGACTAGAT+TGG - chr7_2:62965375-62965394 Msa1067980:intron 30.0%
!! AAAAGCAGAGTTTCAAGTTA+TGG + chr7_2:62965519-62965538 None:intergenic 30.0%
ATCTTTCAAACTGAAGACTT+GGG + chr7_2:62965597-62965616 None:intergenic 30.0%
TATCTTTCAAACTGAAGACT+TGG + chr7_2:62965598-62965617 None:intergenic 30.0%
ATTTGGTATAGTACGTACTA+AGG + chr7_2:62965748-62965767 None:intergenic 30.0%
! AATTTTTGCAAACTGTGCAT+TGG - chr7_2:62965784-62965803 Msa1067980:intron 30.0%
! ATTTTTGCAAACTGTGCATT+GGG - chr7_2:62965785-62965804 Msa1067980:intron 30.0%
GAGACCATATATAGACAATT+TGG - chr7_2:62965816-62965835 Msa1067980:intron 30.0%
CTATGTGCGATAATTAGATT+TGG - chr7_2:62966065-62966084 Msa1067980:CDS 30.0%
! ATCCTTTGTCTTTTGATGAA+TGG - chr7_2:62966115-62966134 Msa1067980:intron 30.0%
!! GGTTTTCTTTTGTTTCACAT+AGG + chr7_2:62966373-62966392 None:intergenic 30.0%
AAACCAGTTTAACAATTCAC+TGG - chr7_2:62966388-62966407 Msa1067980:intron 30.0%
ACAATGACTAAAGCAATACT+GGG + chr7_2:62966525-62966544 None:intergenic 30.0%
TACAATGACTAAAGCAATAC+TGG + chr7_2:62966526-62966545 None:intergenic 30.0%
TTACAGTACTATCTGAAAAC+AGG - chr7_2:62966609-62966628 Msa1067980:intron 30.0%
AAAACAGGAACTTGCAAATT+TGG - chr7_2:62966624-62966643 Msa1067980:intron 30.0%
! AGAGTTGCCTTGAATATTTT+AGG - chr7_2:62966696-62966715 Msa1067980:intron 30.0%
TGGATAGCCTAAAATATTCA+AGG + chr7_2:62966706-62966725 None:intergenic 30.0%
! AATTTTGAATACTAACTGGG+CGG + chr7_2:62966731-62966750 None:intergenic 30.0%
! GGGAAATTTTGAATACTAAC+TGG + chr7_2:62966735-62966754 None:intergenic 30.0%
! ACTCATTTGGTTTCATTCAA+TGG - chr7_2:62966824-62966843 Msa1067980:intron 30.0%
TCCCATAAAAAATTCAGGTA+AGG + chr7_2:62966948-62966967 None:intergenic 30.0%
AAGGATCCCATAAAAAATTC+AGG + chr7_2:62966953-62966972 None:intergenic 30.0%
!! ATTGGAAGTACCATATTACT+TGG + chr7_2:62967102-62967121 None:intergenic 30.0%
! ATTAAAGGTGCATAACTTGA+GGG + chr7_2:62967246-62967265 None:intergenic 30.0%
! AATTAAAGGTGCATAACTTG+AGG + chr7_2:62967247-62967266 None:intergenic 30.0%
! TTGTGTTTTCACATAGCTTA+AGG - chr7_2:62967449-62967468 Msa1067980:intron 30.0%
! TTTCACATAGCTTAAGGTTT+TGG - chr7_2:62967455-62967474 Msa1067980:intron 30.0%
GCCATATTGCATTAAATTAG+AGG + chr7_2:62967818-62967837 None:intergenic 30.0%
ATGCTAACACATTACAGTAT+TGG + chr7_2:62967873-62967892 None:intergenic 30.0%
TGTAATGTGTTAGCATCTAA+TGG - chr7_2:62967877-62967896 Msa1067980:intron 30.0%
ATGCTAACACATTACAGTAT+TGG + chr7_2:62967873-62967892 None:intergenic 30.0%
TGTAATGTGTTAGCATCTAA+TGG - chr7_2:62967877-62967896 Msa1067980:intron 30.0%
! TCATTTCTCATTGTTTGTTG+TGG + chr7_2:62967977-62967996 None:intergenic 30.0%
ATGAGAAATGATCAAACCTA+TGG - chr7_2:62967986-62968005 Msa1067980:intron 30.0%
ATAACAAGATATCAACTCAC+AGG + chr7_2:62968271-62968290 None:intergenic 30.0%
!! GTGAGTTGATATCTTGTTAT+CGG - chr7_2:62968271-62968290 Msa1067980:intron 30.0%
! AGTCTTCTTAATTTTGCTTG+TGG - chr7_2:62968406-62968425 Msa1067980:intron 30.0%
AATATGGGTCATCTGATTTA+GGG - chr7_2:62968640-62968659 Msa1067980:intron 30.0%
!! TCACTTTGTTTCTAAAAGCT+AGG - chr7_2:62968810-62968829 Msa1067980:CDS 30.0%
CGAGTTACTAACAGTAATAA+CGG - chr7_2:62968876-62968895 Msa1067980:CDS 30.0%
TCTAAACAAATTGTGATCTG+TGG - chr7_2:62969111-62969130 Msa1067980:intron 30.0%
!!! TGTTCTCATCACATTGATTT+TGG - chr7_2:62969310-62969329 Msa1067980:intron 30.0%
!! ATTTTGGTACAATCTGATAG+AGG - chr7_2:62969326-62969345 Msa1067980:intron 30.0%
GCATTAAGTTTATCATCAGA+AGG - chr7_2:62969529-62969548 Msa1067980:intron 30.0%
ATAATGTTGTCTCTTGGAAA+TGG - chr7_2:62969645-62969664 Msa1067980:intron 30.0%
TAATGTTGTCTCTTGGAAAT+GGG - chr7_2:62969646-62969665 Msa1067980:intron 30.0%
AACTGAAGAAATGTTCACAT+TGG + chr7_2:62969888-62969907 None:intergenic 30.0%
CAACTGTTTCGTTAAAGAAA+AGG + chr7_2:62970013-62970032 None:intergenic 30.0%
! CTTTTCTTTAACGAAACAGT+TGG - chr7_2:62970011-62970030 Msa1067980:five_prime_UTR 30.0%
AAGGATATTGATCCTAATGT+TGG + chr7_2:62970083-62970102 None:intergenic 30.0%
TTGGATAGATAGATGAGATG+AGG - chr7_2:62963012-62963031 Msa1067980:three_prime_UTR 35.0%
ATAGATAGATGAGATGAGGT+TGG - chr7_2:62963016-62963035 Msa1067980:three_prime_UTR 35.0%
TTCTTTGTTCTCATTTGTGG+AGG - chr7_2:62963053-62963072 Msa1067980:three_prime_UTR 35.0%
AGAAAAAGAGAAAGAGAGAG+AGG + chr7_2:62963094-62963113 None:intergenic 35.0%
AAGAGTGAGTTAACAAAACG+TGG - chr7_2:62963270-62963289 Msa1067980:three_prime_UTR 35.0%
AGAGTGAGTTAACAAAACGT+GGG - chr7_2:62963271-62963290 Msa1067980:three_prime_UTR 35.0%
AAAAGAGAAGAGAACCTTGA+GGG + chr7_2:62963389-62963408 None:intergenic 35.0%
CATTTACCAACAGAAACACA+TGG + chr7_2:62963558-62963577 None:intergenic 35.0%
CTTTCTAACATATGCATGCA+AGG - chr7_2:62963711-62963730 Msa1067980:CDS 35.0%
TCTTCACAGTCACACAAAAA+AGG + chr7_2:62963932-62963951 None:intergenic 35.0%
TTTCAAAAGCTGTAGTGTCA+TGG + chr7_2:62963969-62963988 None:intergenic 35.0%
!! GCTTTTGAAAAGTCGTACAA+AGG - chr7_2:62963979-62963998 Msa1067980:intron 35.0%
GATCAATTTCACTTTCACAC+TGG + chr7_2:62964119-62964138 None:intergenic 35.0%
!!! TACGTGTTTTGGTATTTCAG+AGG - chr7_2:62964188-62964207 Msa1067980:intron 35.0%
ATGTTGCTCCAAATCTACAA+AGG + chr7_2:62964314-62964333 None:intergenic 35.0%
TTCAACAAGTGATCTTTGCT+TGG - chr7_2:62964577-62964596 Msa1067980:intron 35.0%
TGTTTCTCAATGACTGCATA+AGG - chr7_2:62964932-62964951 Msa1067980:CDS 35.0%
AACGGGATTTGAATTGTTAC+TGG + chr7_2:62965107-62965126 None:intergenic 35.0%
GTCTTGTATCCCTATACTTT+AGG + chr7_2:62965141-62965160 None:intergenic 35.0%
AGCTGATTGCCATCTTATAT+GGG + chr7_2:62965343-62965362 None:intergenic 35.0%
AAGCTGATTGCCATCTTATA+TGG + chr7_2:62965344-62965363 None:intergenic 35.0%
AATGATCGAGTTTCATTGCA+CGG + chr7_2:62965410-62965429 None:intergenic 35.0%
! ACAGTATTTTGTTGGGATTG+AGG + chr7_2:62965568-62965587 None:intergenic 35.0%
TCCCAACAAAATACTGTAGT+TGG - chr7_2:62965571-62965590 Msa1067980:intron 35.0%
! GCCAACTACAGTATTTTGTT+GGG + chr7_2:62965575-62965594 None:intergenic 35.0%
AGTAATGATAACCCCTATCT+AGG - chr7_2:62965661-62965680 Msa1067980:intron 35.0%
TAGACAATTTGGACAAATGG+CGG - chr7_2:62965827-62965846 Msa1067980:CDS 35.0%
!! AGAAAGTATTCCCATGATCA+AGG - chr7_2:62965864-62965883 Msa1067980:CDS 35.0%
AAAGGATGTCTTCCTCATAT+TGG + chr7_2:62966102-62966121 None:intergenic 35.0%
CTCCATTCATCAAAAGACAA+AGG + chr7_2:62966120-62966139 None:intergenic 35.0%
! GTCTTTTGATGAATGGAGAT+TGG - chr7_2:62966122-62966141 Msa1067980:intron 35.0%
TATTATTATCTCTGCCTCTC+TGG - chr7_2:62966209-62966228 Msa1067980:intron 35.0%
CAAAATAAGTCATTCCAGAG+AGG + chr7_2:62966226-62966245 None:intergenic 35.0%
GAACCAGTGAATTGTTAAAC+TGG + chr7_2:62966394-62966413 None:intergenic 35.0%
ATACTGGGGCTTAACATTAT+AGG + chr7_2:62966510-62966529 None:intergenic 35.0%
CAATGACTAAAGCAATACTG+GGG + chr7_2:62966524-62966543 None:intergenic 35.0%
GTTTCATCATCCTAAAGACA+AGG - chr7_2:62966659-62966678 Msa1067980:intron 35.0%
! TCGATGAACGTTTACTGATT+TGG + chr7_2:62966780-62966799 None:intergenic 35.0%
!! AGTAAACGTTCATCGATTTG+TGG - chr7_2:62966784-62966803 Msa1067980:intron 35.0%
AGAACTGGTCAATGCAAATT+TGG - chr7_2:62967048-62967067 Msa1067980:intron 35.0%
GAACTGGTCAATGCAAATTT+GGG - chr7_2:62967049-62967068 Msa1067980:intron 35.0%
AGTACCATATTACTTGGTTG+AGG + chr7_2:62967096-62967115 None:intergenic 35.0%
AATATGGTACTTCCAATGAG+AGG - chr7_2:62967105-62967124 Msa1067980:intron 35.0%
! TTAAAGGTGCATAACTTGAG+GGG + chr7_2:62967245-62967264 None:intergenic 35.0%
ACTCCTTGAGGTAGAATTAA+AGG + chr7_2:62967261-62967280 None:intergenic 35.0%
TTTAATTCTACCTCAAGGAG+TGG - chr7_2:62967260-62967279 Msa1067980:intron 35.0%
! AGATCATCCAATCTTTTCGT+AGG - chr7_2:62967315-62967334 Msa1067980:intron 35.0%
! ATCCAATCTTTTCGTAGGAT+AGG - chr7_2:62967320-62967339 Msa1067980:intron 35.0%
AACCTATCCTACGAAAAGAT+TGG + chr7_2:62967325-62967344 None:intergenic 35.0%
CGTAGGATAGGTTATAACAA+AGG - chr7_2:62967332-62967351 Msa1067980:intron 35.0%
AACAAAGGAATAGAAAGACG+TGG - chr7_2:62967347-62967366 Msa1067980:intron 35.0%
!! GCTTAAGGTTTTGGTATAGT+TGG - chr7_2:62967464-62967483 Msa1067980:intron 35.0%
! CACACACACAAGTGTATTTT+TGG + chr7_2:62967526-62967545 None:intergenic 35.0%
!! GCTTGAACTTTTTGAAGAGT+TGG - chr7_2:62967613-62967632 Msa1067980:intron 35.0%
AACACCATGGTTAAGTTAGT+TGG - chr7_2:62967641-62967660 Msa1067980:intron 35.0%
ACACCATGGTTAAGTTAGTT+GGG - chr7_2:62967642-62967661 Msa1067980:intron 35.0%
GAAATAGACCTTTATGGACA+AGG + chr7_2:62967695-62967714 None:intergenic 35.0%
CCAGAAGAAATAGACCTTTA+TGG + chr7_2:62967701-62967720 None:intergenic 35.0%
! CCATAAAGGTCTATTTCTTC+TGG - chr7_2:62967698-62967717 Msa1067980:intron 35.0%
!! GCGTTTTTCAGAGAATAACT+TGG - chr7_2:62967758-62967777 Msa1067980:intron 35.0%
TTGGCATCATCTGTATGATA+TGG - chr7_2:62967777-62967796 Msa1067980:intron 35.0%
GTATATTCTCAATACCGTTC+TGG - chr7_2:62968052-62968071 Msa1067980:intron 35.0%
TAGGATTCTATGCTTTGCAA+AGG - chr7_2:62968086-62968105 Msa1067980:intron 35.0%
AGGATTCTATGCTTTGCAAA+GGG - chr7_2:62968087-62968106 Msa1067980:intron 35.0%
TTCATGTAGAATTGGCATTC+AGG + chr7_2:62968142-62968161 None:intergenic 35.0%
!!! TATCCTTTGAGTTTTAGCTC+TGG - chr7_2:62968531-62968550 Msa1067980:intron 35.0%
ATATACCCAGCACAATTGTT+GGG - chr7_2:62968579-62968598 Msa1067980:intron 35.0%
GATGACCCATATTGAGTATA+GGG + chr7_2:62968633-62968652 None:intergenic 35.0%
AGATGACCCATATTGAGTAT+AGG + chr7_2:62968634-62968653 None:intergenic 35.0%
CAATATGGGTCATCTGATTT+AGG - chr7_2:62968639-62968658 Msa1067980:intron 35.0%
!!! CTTGTTGTGTTGATAGCTTT+TGG + chr7_2:62968849-62968868 None:intergenic 35.0%
TTCCCACTTAAGATGTTACA+TGG - chr7_2:62968935-62968954 Msa1067980:intron 35.0%
TCCCACTTAAGATGTTACAT+GGG - chr7_2:62968936-62968955 Msa1067980:intron 35.0%
TCCCATGTAACATCTTAAGT+GGG + chr7_2:62968940-62968959 None:intergenic 35.0%
TTCCCATGTAACATCTTAAG+TGG + chr7_2:62968941-62968960 None:intergenic 35.0%
TAAGATGTTACATGGGAAAC+AGG - chr7_2:62968943-62968962 Msa1067980:intron 35.0%
AAGATGTTACATGGGAAACA+GGG - chr7_2:62968944-62968963 Msa1067980:intron 35.0%
ATATTAGTTACTCCCTTTGC+TGG + chr7_2:62968994-62969013 None:intergenic 35.0%
AATATCCCATGGTCTCATAT+TGG - chr7_2:62969009-62969028 Msa1067980:intron 35.0%
ATACAAGCTACTATTTCCCT+TGG + chr7_2:62969076-62969095 None:intergenic 35.0%
TATTCGCTTCACCCAATTAA+AGG + chr7_2:62969234-62969253 None:intergenic 35.0%
CACTTTGTGTATTCTATTCG+CGG - chr7_2:62969374-62969393 Msa1067980:intron 35.0%
TTATAGGTGAAGATTCCCAT+TGG + chr7_2:62969442-62969461 None:intergenic 35.0%
AGGTGATGCAGATACATTAT+AGG + chr7_2:62969458-62969477 None:intergenic 35.0%
ATCATCAATGTCATCATCAC+CGG + chr7_2:62969620-62969639 None:intergenic 35.0%
!! TGATGATGACATTGATGATG+AGG - chr7_2:62969621-62969640 Msa1067980:intron 35.0%
!! GATGATGACATTGATGATGA+GGG - chr7_2:62969622-62969641 Msa1067980:intron 35.0%
TTTGACATGAACTCTGTGTT+TGG + chr7_2:62969756-62969775 None:intergenic 35.0%
AACCTACTATTGAATGCAGT+TGG - chr7_2:62969787-62969806 Msa1067980:five_prime_UTR 35.0%
CGTTAAAGAAAAGGATTTGC+TGG + chr7_2:62970004-62970023 None:intergenic 35.0%
! ATAGATGAGATGAGGTTGGT+TGG - chr7_2:62963020-62963039 Msa1067980:three_prime_UTR 40.0%
! TTTCTCTCTTGGTTGAGTTG+AGG - chr7_2:62963206-62963225 Msa1067980:three_prime_UTR 40.0%
!! TTCTCTCTTGGTTGAGTTGA+GGG - chr7_2:62963207-62963226 Msa1067980:three_prime_UTR 40.0%
GAGTGAGTTAACAAAACGTG+GGG - chr7_2:62963272-62963291 Msa1067980:three_prime_UTR 40.0%
GAAAAGAGAAGAGAACCTTG+AGG + chr7_2:62963390-62963409 None:intergenic 40.0%
AATTAAGCGATGATCGGTGA+TGG + chr7_2:62963417-62963436 None:intergenic 40.0%
!! AGTTGGTTTGAAGAGAGTGA+CGG + chr7_2:62963495-62963514 None:intergenic 40.0%
! GGCATTGTGGGTTTAACTTA+TGG + chr7_2:62964098-62964117 None:intergenic 40.0%
TTGGTATTTCAGAGGCAATG+TGG - chr7_2:62964196-62964215 Msa1067980:intron 40.0%
CCTGATTCCATTGTTTCACT+TGG + chr7_2:62964237-62964256 None:intergenic 40.0%
CCAAGTGAAACAATGGAATC+AGG - chr7_2:62964234-62964253 Msa1067980:intron 40.0%
!! TATGAACAATCTGGTTCTCC+AGG + chr7_2:62964276-62964295 None:intergenic 40.0%
! GTAGATTTGGAGCAACATGT+CGG - chr7_2:62964316-62964335 Msa1067980:intron 40.0%
GGTTTAATCATCCTCCTAAC+AGG - chr7_2:62964337-62964356 Msa1067980:intron 40.0%
ATCACTAATTTCCAAGGTGC+TGG - chr7_2:62964493-62964512 Msa1067980:intron 40.0%
TGTTGAAAGAAGAACAGCGA+GGG + chr7_2:62964564-62964583 None:intergenic 40.0%
TTGTTGAAAGAAGAACAGCG+AGG + chr7_2:62964565-62964584 None:intergenic 40.0%
AATTACCTGCACACATGTTC+AGG - chr7_2:62964614-62964633 Msa1067980:intron 40.0%
AAGTATAGGGATACAAGACG+AGG - chr7_2:62965142-62965161 Msa1067980:CDS 40.0%
CCAAATCTCTTCAAGCACAT+AGG + chr7_2:62965249-62965268 None:intergenic 40.0%
CCTATGTGCTTGAAGAGATT+TGG - chr7_2:62965246-62965265 Msa1067980:intron 40.0%
! GGCCAACTACAGTATTTTGT+TGG + chr7_2:62965576-62965595 None:intergenic 40.0%
AATTTGGACAAATGGCGGTT+TGG - chr7_2:62965832-62965851 Msa1067980:CDS 40.0%
!! TCAAAGCCTCATTTTAACCC+CGG + chr7_2:62965890-62965909 None:intergenic 40.0%
TCTTCCTCATATTGGACATG+AGG + chr7_2:62966094-62966113 None:intergenic 40.0%
! AATCCTATTTGAGGCATGTC+AGG + chr7_2:62966333-62966352 None:intergenic 40.0%
ACTGGAGGTAATCCTATTTG+AGG + chr7_2:62966342-62966361 None:intergenic 40.0%
AATAGGATTACCTCCAGTAG+AGG - chr7_2:62966344-62966363 Msa1067980:intron 40.0%
ATAGGATTACCTCCAGTAGA+GGG - chr7_2:62966345-62966364 Msa1067980:intron 40.0%
ATCATCCTAAAGACAAGGCT+GGG - chr7_2:62966664-62966683 Msa1067980:intron 40.0%
CCATATTACTTGGTTGAGGA+TGG + chr7_2:62967092-62967111 None:intergenic 40.0%
CCATCCTCAACCAAGTAATA+TGG - chr7_2:62967089-62967108 Msa1067980:intron 40.0%
TAAACAGGAGAACCTCTCAT+TGG + chr7_2:62967120-62967139 None:intergenic 40.0%
ATGCGGCAGGAATTACAAAT+TGG - chr7_2:62967181-62967200 Msa1067980:intron 40.0%
CATCATATATTCCCAGTCCA+AGG - chr7_2:62967211-62967230 Msa1067980:intron 40.0%
GCACCTTTAATTCTACCTCA+AGG - chr7_2:62967255-62967274 Msa1067980:intron 40.0%
TATGACACACTCTTGAAGTG+TGG + chr7_2:62967400-62967419 None:intergenic 40.0%
GGTATAGTTGGTTAGTGACA+TGG - chr7_2:62967476-62967495 Msa1067980:intron 40.0%
! AGAGTTGGTTCATAACACCA+TGG - chr7_2:62967628-62967647 Msa1067980:intron 40.0%
TATGGACAAGGATGTGAGAT+GGG + chr7_2:62967683-62967702 None:intergenic 40.0%
TTATGGACAAGGATGTGAGA+TGG + chr7_2:62967684-62967703 None:intergenic 40.0%
TCTCACATCCTTGTCCATAA+AGG - chr7_2:62967684-62967703 Msa1067980:intron 40.0%
! GGTATTGAGAATATACCCCT+GGG + chr7_2:62968048-62968067 None:intergenic 40.0%
TGCAAAGCATAGAATCCTAC+TGG + chr7_2:62968085-62968104 None:intergenic 40.0%
TGCCAATTCTACATGAAGAC+TGG - chr7_2:62968145-62968164 Msa1067980:intron 40.0%
GCCAATTCTACATGAAGACT+GGG - chr7_2:62968146-62968165 Msa1067980:intron 40.0%
CCAATTCTACATGAAGACTG+GGG - chr7_2:62968147-62968166 Msa1067980:intron 40.0%
!!! TTTTGAGTTTGCTAAGGCCT+CGG - chr7_2:62968374-62968393 Msa1067980:intron 40.0%
! AGAAGACTCATTCTTTTCCG+AGG + chr7_2:62968394-62968413 None:intergenic 40.0%
TGTCCAGAGCTAAAACTCAA+AGG + chr7_2:62968537-62968556 None:intergenic 40.0%
!!! TTTGAGTTTTAGCTCTGGAC+AGG - chr7_2:62968536-62968555 Msa1067980:intron 40.0%
GATATACCCAGCACAATTGT+TGG - chr7_2:62968578-62968597 Msa1067980:intron 40.0%
TTGGGACCCTATACTCAATA+TGG - chr7_2:62968624-62968643 Msa1067980:intron 40.0%
TGGGACCCTATACTCAATAT+GGG - chr7_2:62968625-62968644 Msa1067980:intron 40.0%
! AGCGTCGAGTTCATAATTTC+TGG + chr7_2:62968684-62968703 None:intergenic 40.0%
AGAAATTATGAACTCGACGC+TGG - chr7_2:62968683-62968702 Msa1067980:intron 40.0%
TTACATGGGAAACAGGGTAA+CGG - chr7_2:62968950-62968969 Msa1067980:intron 40.0%
TTGCTGGTCGTGATTACTTA+GGG + chr7_2:62968978-62968997 None:intergenic 40.0%
TTTGCTGGTCGTGATTACTT+AGG + chr7_2:62968979-62968998 None:intergenic 40.0%
TAAGTAATCACGACCAGCAA+AGG - chr7_2:62968978-62968997 Msa1067980:intron 40.0%
AAGTAATCACGACCAGCAAA+GGG - chr7_2:62968979-62968998 Msa1067980:intron 40.0%
AGGGAGTAACTAATATCCCA+TGG - chr7_2:62968998-62969017 Msa1067980:intron 40.0%
TCTCTCCAATATGAGACCAT+GGG + chr7_2:62969017-62969036 None:intergenic 40.0%
AAAAAGAGCAGAGGCAGTAT+GGG - chr7_2:62969039-62969058 Msa1067980:intron 40.0%
AGAGGCAGTATGGGATATAT+GGG - chr7_2:62969048-62969067 Msa1067980:intron 40.0%
TATGGGATATATGGGAACCA+AGG - chr7_2:62969056-62969075 Msa1067980:intron 40.0%
ATGGGATATATGGGAACCAA+GGG - chr7_2:62969057-62969076 Msa1067980:intron 40.0%
! AGGTAATCCCATTTTCTGCA+GGG - chr7_2:62969346-62969365 Msa1067980:intron 40.0%
CGCGAATAGAATACACAAAG+TGG + chr7_2:62969376-62969395 None:intergenic 40.0%
TGTGTATTCTATTCGCGGTA+TGG - chr7_2:62969379-62969398 Msa1067980:intron 40.0%
CGGTATGGCATATGCAAATT+TGG - chr7_2:62969394-62969413 Msa1067980:intron 40.0%
TGCAAGTTTGACCATCCAAT+GGG - chr7_2:62969424-62969443 Msa1067980:intron 40.0%
!! ATCAGAAGGACTTGTTGAGT+CGG - chr7_2:62969543-62969562 Msa1067980:intron 40.0%
! TCTGATAATGAAAGCCTCCT+TGG + chr7_2:62969580-62969599 None:intergenic 40.0%
TGAGGGATAATGTTGTCTCT+TGG - chr7_2:62969639-62969658 Msa1067980:intron 40.0%
! TGAATTGATTTCCCCATTGC+TGG - chr7_2:62969716-62969735 Msa1067980:intron 40.0%
TGCCAACTGCATTCAATAGT+AGG + chr7_2:62969792-62969811 None:intergenic 40.0%
! ATTTGCTGGAAGATTCACAC+TGG + chr7_2:62969990-62970009 None:intergenic 40.0%
! ATGAGATGAGGTTGGTTGGT+TGG - chr7_2:62963024-62963043 Msa1067980:three_prime_UTR 45.0%
AGTTTGTGAGTGTGACAGAC+AGG - chr7_2:62963300-62963319 Msa1067980:three_prime_UTR 45.0%
GTTTGTGAGTGTGACAGACA+GGG - chr7_2:62963301-62963320 Msa1067980:three_prime_UTR 45.0%
TATATGCCGCATCGCATCAA+TGG - chr7_2:62963350-62963369 Msa1067980:three_prime_UTR 45.0%
CGTATTCCATTGATGCGATG+CGG + chr7_2:62963359-62963378 None:intergenic 45.0%
! GCAGTTCCATGTGTTTCTGT+TGG - chr7_2:62963549-62963568 Msa1067980:CDS 45.0%
AAGTTCCAAGTCACAGACAC+TGG + chr7_2:62964047-62964066 None:intergenic 45.0%
CACTTTCACACTGGCATTGT+GGG + chr7_2:62964110-62964129 None:intergenic 45.0%
TCACTTTCACACTGGCATTG+TGG + chr7_2:62964111-62964130 None:intergenic 45.0%
CAATGTGGCAAATGAGCTTG+AGG - chr7_2:62964211-62964230 Msa1067980:intron 45.0%
CTTGAGGCCAAGTGAAACAA+TGG - chr7_2:62964227-62964246 Msa1067980:intron 45.0%
AATGGAATCAGGACCGTATC+CGG - chr7_2:62964245-62964264 Msa1067980:intron 45.0%
AGAACCGGCCTTTGTAGATT+TGG - chr7_2:62964303-62964322 Msa1067980:intron 45.0%
TGCTCCAAATCTACAAAGGC+CGG + chr7_2:62964310-62964329 None:intergenic 45.0%
TTGAAAGAAGAACAGCGAGG+GGG + chr7_2:62964562-62964581 None:intergenic 45.0%
GTTGAAAGAAGAACAGCGAG+GGG + chr7_2:62964563-62964582 None:intergenic 45.0%
CAAGTACATGCCTGACATTC+TGG + chr7_2:62964914-62964933 None:intergenic 45.0%
GGGCAGAGAGATTTCTTCTT+AGG - chr7_2:62965059-62965078 Msa1067980:CDS 45.0%
! ACAAATGGCGGTTTGGCAAA+AGG - chr7_2:62965839-62965858 Msa1067980:CDS 45.0%
AGTATTCCCATGATCAAGGC+CGG - chr7_2:62965868-62965887 Msa1067980:CDS 45.0%
! AATGAGGCTTTGACACCAAC+TGG - chr7_2:62965897-62965916 Msa1067980:CDS 45.0%
GTATCCTTGAGAGTTCCAGT+TGG + chr7_2:62965915-62965934 None:intergenic 45.0%
CTGGAACTCTCAAGGATACT+TGG - chr7_2:62965916-62965935 Msa1067980:CDS 45.0%
! TTCATATGGGCTGATCTCTC+AGG + chr7_2:62965947-62965966 None:intergenic 45.0%
GAGTCCTCATGTCCAATATG+AGG - chr7_2:62966087-62966106 Msa1067980:CDS 45.0%
TGATGAATGGAGATTGGCAG+TGG - chr7_2:62966128-62966147 Msa1067980:intron 45.0%
GATGAATGGAGATTGGCAGT+GGG - chr7_2:62966129-62966148 Msa1067980:intron 45.0%
ATGAATGGAGATTGGCAGTG+GGG - chr7_2:62966130-62966149 Msa1067980:intron 45.0%
AGGATGATGAAACCTGCATG+TGG + chr7_2:62966652-62966671 None:intergenic 45.0%
CATCATCCTAAAGACAAGGC+TGG - chr7_2:62966663-62966682 Msa1067980:intron 45.0%
TCATCCTAAAGACAAGGCTG+GGG - chr7_2:62966665-62966684 Msa1067980:intron 45.0%
GACTGGACAGTAGGATAAAC+AGG + chr7_2:62967135-62967154 None:intergenic 45.0%
CATATATTCCCAGTCCAAGG+TGG - chr7_2:62967214-62967233 Msa1067980:intron 45.0%
ACATTGTATGTACTCCACCC+AGG + chr7_2:62967294-62967313 None:intergenic 45.0%
GACGTGGTATTCTATGCTTG+TGG - chr7_2:62967363-62967382 Msa1067980:intron 45.0%
! ATTCATGTGCTGCTGTCACT+TGG - chr7_2:62967588-62967607 Msa1067980:intron 45.0%
TCGCCCAACTAACTTAACCA+TGG + chr7_2:62967648-62967667 None:intergenic 45.0%
GGTTAAGTTAGTTGGGCGAT+TGG - chr7_2:62967649-62967668 Msa1067980:intron 45.0%
ATGGACAAGGATGTGAGATG+GGG + chr7_2:62967682-62967701 None:intergenic 45.0%
ACCTATGGAACTTCTCACCA+AGG - chr7_2:62968001-62968020 Msa1067980:intron 45.0%
ACCTTGGTGAGAAGTTCCAT+AGG + chr7_2:62968005-62968024 None:intergenic 45.0%
! CTGCATTTTCTGGATCACCT+TGG + chr7_2:62968021-62968040 None:intergenic 45.0%
CAAGGTGATCCAGAAAATGC+AGG - chr7_2:62968019-62968038 Msa1067980:intron 45.0%
! CGGTATTGAGAATATACCCC+TGG + chr7_2:62968049-62968068 None:intergenic 45.0%
AATTGGCATTCAGGCTGATC+AGG + chr7_2:62968133-62968152 None:intergenic 45.0%
CCCCAGTCTTCATGTAGAAT+TGG + chr7_2:62968150-62968169 None:intergenic 45.0%
AAGACTGGGGATTGCAAGTT+CGG - chr7_2:62968160-62968179 Msa1067980:intron 45.0%
GGGACTCAAAACACAATCAG+GGG + chr7_2:62968230-62968249 None:intergenic 45.0%
GGGGACTCAAAACACAATCA+GGG + chr7_2:62968231-62968250 None:intergenic 45.0%
AGGGGACTCAAAACACAATC+AGG + chr7_2:62968232-62968251 None:intergenic 45.0%
!! GATTGTGTTTTGAGTCCCCT+TGG - chr7_2:62968232-62968251 Msa1067980:intron 45.0%
TATCAACTCACAGGACGCAA+AGG + chr7_2:62968262-62968281 None:intergenic 45.0%
CAAAGCCCAACAATTGTGCT+GGG + chr7_2:62968587-62968606 None:intergenic 45.0%
ACAAAGCCCAACAATTGTGC+TGG + chr7_2:62968588-62968607 None:intergenic 45.0%
TGTGCTCTGTGCAGGAATAT+TGG - chr7_2:62968605-62968624 Msa1067980:intron 45.0%
GTGCTCTGTGCAGGAATATT+GGG - chr7_2:62968606-62968625 Msa1067980:intron 45.0%
CTCTCTCCAATATGAGACCA+TGG + chr7_2:62969018-62969037 None:intergenic 45.0%
CATGGTCTCATATTGGAGAG+AGG - chr7_2:62969016-62969035 Msa1067980:intron 45.0%
GAAAAAGAGCAGAGGCAGTA+TGG - chr7_2:62969038-62969057 Msa1067980:intron 45.0%
CAGAGGCAGTATGGGATATA+TGG - chr7_2:62969047-62969066 Msa1067980:intron 45.0%
! GAGGTAATCCCATTTTCTGC+AGG - chr7_2:62969345-62969364 Msa1067980:intron 45.0%
TGGTTCTCCCTGCAGAAAAT+GGG + chr7_2:62969356-62969375 None:intergenic 45.0%
GATGGTCAAACTTGCAGCTT+GGG + chr7_2:62969420-62969439 None:intergenic 45.0%
CTGCAAGTTTGACCATCCAA+TGG - chr7_2:62969423-62969442 Msa1067980:intron 45.0%
AGGTGAAGATTCCCATTGGA+TGG + chr7_2:62969438-62969457 None:intergenic 45.0%
!! TCAGAAGGACTTGTTGAGTC+GGG - chr7_2:62969544-62969563 Msa1067980:intron 45.0%
TCATCATCACCGGAAGGATT+CGG + chr7_2:62969610-62969629 None:intergenic 45.0%
TCAATGTCATCATCACCGGA+AGG + chr7_2:62969616-62969635 None:intergenic 45.0%
TCTGTACATCTCCAGCAATG+GGG + chr7_2:62969730-62969749 None:intergenic 45.0%
CTCTGTACATCTCCAGCAAT+GGG + chr7_2:62969731-62969750 None:intergenic 45.0%
ACTCTGTACATCTCCAGCAA+TGG + chr7_2:62969732-62969751 None:intergenic 45.0%
AGCATGAAATCCAGAACGAC+TGG + chr7_2:62969818-62969837 None:intergenic 45.0%
TGCAATGGCAAGCCAACATT+AGG - chr7_2:62970068-62970087 Msa1067980:five_prime_UTR 45.0%
!! AAAAAAACAAAAAAAAAAAA+AGG + chr7_2:62963519-62963538 None:intergenic 5.0%
!!! TTTTTTTTTTTTGTTTTTTT+TGG - chr7_2:62963519-62963538 Msa1067980:CDS 5.0%
TGAAAAAAGGGAGCGAGCGA+GGG - chr7_2:62962950-62962969 Msa1067980:three_prime_UTR 50.0%
!! TCTCTTGGTTGAGTTGAGGG+TGG - chr7_2:62963210-62963229 Msa1067980:three_prime_UTR 50.0%
! TTGAGGGTGGAGGTTGATCT+CGG - chr7_2:62963223-62963242 Msa1067980:three_prime_UTR 50.0%
GAATACGATGCCATCCCTCA+AGG - chr7_2:62963372-62963391 Msa1067980:three_prime_UTR 50.0%
GAGAAGAGAACCTTGAGGGA+TGG + chr7_2:62963385-62963404 None:intergenic 50.0%
ATTACACAGTGGGGCCATCA+AGG - chr7_2:62964015-62964034 Msa1067980:intron 50.0%
TCATCCTCCTAACAGGAAGC+TGG - chr7_2:62964344-62964363 Msa1067980:intron 50.0%
GTTCGTACCAGCTTCCTGTT+AGG + chr7_2:62964354-62964373 None:intergenic 50.0%
GTACTCCTGAACATGTGTGC+AGG + chr7_2:62964622-62964641 None:intergenic 50.0%
ATTGCCACTGCACGGATGAA+AGG - chr7_2:62964863-62964882 Msa1067980:intron 50.0%
TGAAAGGCGAGTTCCCAGAA+AGG - chr7_2:62964879-62964898 Msa1067980:CDS 50.0%
GCGAGTTCCCAGAAAGGTTA+GGG - chr7_2:62964885-62964904 Msa1067980:CDS 50.0%
ATCAACTCTCCCAACTCAGC+TGG - chr7_2:62965180-62965199 Msa1067980:intron 50.0%
TCAACTCTCCCAACTCAGCT+GGG - chr7_2:62965181-62965200 Msa1067980:intron 50.0%
GAGTTTCATTGCACGGACGT+TGG + chr7_2:62965403-62965422 None:intergenic 50.0%
GTATTCCCATGATCAAGGCC+GGG - chr7_2:62965869-62965888 Msa1067980:CDS 50.0%
TATTCCCATGATCAAGGCCG+GGG - chr7_2:62965870-62965889 Msa1067980:CDS 50.0%
TTAACCCCGGCCTTGATCAT+GGG + chr7_2:62965877-62965896 None:intergenic 50.0%
TTTAACCCCGGCCTTGATCA+TGG + chr7_2:62965878-62965897 None:intergenic 50.0%
TCAAGGCCGGGGTTAAAATG+AGG - chr7_2:62965881-62965900 Msa1067980:CDS 50.0%
GACACCAACTGGAACTCTCA+AGG - chr7_2:62965908-62965927 Msa1067980:CDS 50.0%
TGAATGGAGATTGGCAGTGG+GGG - chr7_2:62966131-62966150 Msa1067980:intron 50.0%
GTGCCTGACATGCCTCAAAT+AGG - chr7_2:62966327-62966346 Msa1067980:intron 50.0%
TTCACATAGGCTCCCTCTAC+TGG + chr7_2:62966360-62966379 None:intergenic 50.0%
! GCAAATTTGGAGCCACATGC+AGG - chr7_2:62966637-62966656 Msa1067980:intron 50.0%
TGAATACTAACTGGGCGGAG+TGG + chr7_2:62966726-62966745 None:intergenic 50.0%
GTAGTTGGAGACTGGACAGT+AGG + chr7_2:62967144-62967163 None:intergenic 50.0%
AGCAGGTCAGCAGTCATATG+CGG - chr7_2:62967164-62967183 Msa1067980:intron 50.0%
AAGGAGTGGTTTCAGTGCCT+GGG - chr7_2:62967274-62967293 Msa1067980:intron 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG - chr7_2:62967536-62967555 Msa1067980:intron 50.0%
TGTGTGTGTGTGTGTGTGGT+GGG - chr7_2:62967544-62967563 Msa1067980:intron 50.0%
CAGAAAATGCAGGACTCCCA+GGG - chr7_2:62968029-62968048 Msa1067980:intron 50.0%
AGAAAATGCAGGACTCCCAG+GGG - chr7_2:62968030-62968049 Msa1067980:intron 50.0%
CTACTGGAACAGAGCCAGAA+CGG + chr7_2:62968069-62968088 None:intergenic 50.0%
! GTTTTCACCATCCACGTGAG+AGG - chr7_2:62968194-62968213 Msa1067980:intron 50.0%
CTCAAAACACAATCAGGGGC+AGG + chr7_2:62968226-62968245 None:intergenic 50.0%
AACTCACAGGACGCAAAGGA+AGG + chr7_2:62968258-62968277 None:intergenic 50.0%
AACTCGACGCTGGAGCTAAA+AGG - chr7_2:62968693-62968712 Msa1067980:intron 50.0%
GGAGAGAGGAAAAAGAGCAG+AGG - chr7_2:62969030-62969049 Msa1067980:intron 50.0%
TGTGATCTGTGGCAGCATTG+TGG - chr7_2:62969122-62969141 Msa1067980:intron 50.0%
! TGTGGCAGCATTGCTGTTGA+TGG - chr7_2:62969140-62969159 Msa1067980:intron 50.0%
GTGGTTCTCCCTGCAGAAAA+TGG + chr7_2:62969357-62969376 None:intergenic 50.0%
GGATGGTCAAACTTGCAGCT+TGG + chr7_2:62969421-62969440 None:intergenic 50.0%
CGTCTGCTAGGTTCTTCATC+AGG - chr7_2:62969499-62969518 Msa1067980:intron 50.0%
GAGACTAGACCGAATCCTTC+CGG - chr7_2:62969598-62969617 Msa1067980:intron 50.0%
GTTGGCAAATCCAGTCGTTC+TGG - chr7_2:62969805-62969824 Msa1067980:five_prime_UTR 50.0%
GTGAAAAAAGGGAGCGAGCG+AGG - chr7_2:62962949-62962968 Msa1067980:three_prime_UTR 55.0%
GAAAAAAGGGAGCGAGCGAG+GGG - chr7_2:62962951-62962970 Msa1067980:three_prime_UTR 55.0%
AAAAAAGGGAGCGAGCGAGG+GGG - chr7_2:62962952-62962971 Msa1067980:three_prime_UTR 55.0%
!! CTTGGTTGAGTTGAGGGTGG+AGG - chr7_2:62963213-62963232 Msa1067980:three_prime_UTR 55.0%
! TGAGGGTGGAGGTTGATCTC+GGG - chr7_2:62963224-62963243 Msa1067980:three_prime_UTR 55.0%
TGTGAGTGTGACAGACAGGG+CGG - chr7_2:62963304-62963323 Msa1067980:three_prime_UTR 55.0%
CCAAGTCACAGACACTGGCA+GGG + chr7_2:62964042-62964061 None:intergenic 55.0%
TCCAAGTCACAGACACTGGC+AGG + chr7_2:62964043-62964062 None:intergenic 55.0%
TCTCCAGGATGCTCCGGATA+CGG + chr7_2:62964261-62964280 None:intergenic 55.0%
!! TCTGGTTCTCCAGGATGCTC+CGG + chr7_2:62964267-62964286 None:intergenic 55.0%
CGTACCAGCTTCCTGTTAGG+AGG + chr7_2:62964351-62964370 None:intergenic 55.0%
!! TCCAAGGTGCTGGCAGCTAT+AGG - chr7_2:62964503-62964522 Msa1067980:intron 55.0%
GTCAGGCTATTGCCACTGCA+CGG - chr7_2:62964855-62964874 Msa1067980:intron 55.0%
GGCGAGTTCCCAGAAAGGTT+AGG - chr7_2:62964884-62964903 Msa1067980:CDS 55.0%
CTGGCTGCCCTAACCTTTCT+GGG + chr7_2:62964895-62964914 None:intergenic 55.0%
TCTGGCTGCCCTAACCTTTC+TGG + chr7_2:62964896-62964915 None:intergenic 55.0%
GTTAGGGCAGCCAGAATGTC+AGG - chr7_2:62964901-62964920 Msa1067980:CDS 55.0%
CAACTCTCCCAACTCAGCTG+GGG - chr7_2:62965182-62965201 Msa1067980:intron 55.0%
ATGTCTGCCCCAGCTGAGTT+GGG + chr7_2:62965192-62965211 None:intergenic 55.0%
GAATGGAGATTGGCAGTGGG+GGG - chr7_2:62966132-62966151 Msa1067980:intron 55.0%
ACATAGGCTCCCTCTACTGG+AGG + chr7_2:62966357-62966376 None:intergenic 55.0%
! GCAACCCCAGCCTTGTCTTT+AGG + chr7_2:62966672-62966691 None:intergenic 55.0%
AAAGACAAGGCTGGGGTTGC+TGG - chr7_2:62966672-62966691 Msa1067980:intron 55.0%
GTCCAGTCTCCAACTACAGC+AGG - chr7_2:62967147-62967166 Msa1067980:intron 55.0%
GACCTGCTGTAGTTGGAGAC+TGG + chr7_2:62967152-62967171 None:intergenic 55.0%
GACTGCTGACCTGCTGTAGT+TGG + chr7_2:62967159-62967178 None:intergenic 55.0%
ATTCCCAGTCCAAGGTGGCA+AGG - chr7_2:62967219-62967238 Msa1067980:intron 55.0%
! GGCACTGAAACCACTCCTTG+AGG + chr7_2:62967273-62967292 None:intergenic 55.0%
CAAGGAGTGGTTTCAGTGCC+TGG - chr7_2:62967273-62967292 Msa1067980:intron 55.0%
GTGTGTGTGTGTGTGTGTGG+TGG - chr7_2:62967543-62967562 Msa1067980:intron 55.0%
GTGTGTGTGTGTGTGTGGTG+GGG - chr7_2:62967545-62967564 Msa1067980:intron 55.0%
TGTGTGTGTGTGTGTGGTGG+GGG - chr7_2:62967546-62967565 Msa1067980:intron 55.0%
! CATGTGCTGCTGTCACTTGG+TGG - chr7_2:62967591-62967610 Msa1067980:intron 55.0%
! CCTGGGAGTCCTGCATTTTC+TGG + chr7_2:62968031-62968050 None:intergenic 55.0%
CCAGAAAATGCAGGACTCCC+AGG - chr7_2:62968028-62968047 Msa1067980:intron 55.0%
!! CGTTCTGGCTCTGTTCCAGT+AGG - chr7_2:62968067-62968086 Msa1067980:intron 55.0%
TCAGGCTGATCAGGTCTCTC+TGG + chr7_2:62968124-62968143 None:intergenic 55.0%
GAATCGTCCTCTCACGTGGA+TGG + chr7_2:62968204-62968223 None:intergenic 55.0%
AGGACGCAAAGGAAGGCCAA+GGG + chr7_2:62968251-62968270 None:intergenic 55.0%
! TTGGGCTTTGTGCTCTGTGC+AGG - chr7_2:62968597-62968616 Msa1067980:intron 55.0%
TCACCTTTAGCTGAAGCCGC+AGG - chr7_2:62969472-62969491 Msa1067980:intron 55.0%
CTTTAGCTGAAGCCGCAGGA+CGG - chr7_2:62969476-62969495 Msa1067980:intron 55.0%
AGTCGGGCTCAGTAAAGCCA+AGG - chr7_2:62969560-62969579 Msa1067980:intron 55.0%
AAAAAGGGAGCGAGCGAGGG+GGG - chr7_2:62962953-62962972 Msa1067980:three_prime_UTR 60.0%
GACACTGGCAGGGTCCTTGA+TGG + chr7_2:62964032-62964051 None:intergenic 60.0%
CCCTGCCAGTGTCTGTGACT+TGG - chr7_2:62964039-62964058 Msa1067980:intron 60.0%
GCCTATAGCTGCCAGCACCT+TGG + chr7_2:62964507-62964526 None:intergenic 60.0%
AGAAGAACAGCGAGGGGGAG+TGG + chr7_2:62964557-62964576 None:intergenic 60.0%
CTCGCCTTTCATCCGTGCAG+TGG + chr7_2:62964870-62964889 None:intergenic 60.0%
CATGTCTGCCCCAGCTGAGT+TGG + chr7_2:62965193-62965212 None:intergenic 60.0%
GGTCAGCAGTCATATGCGGC+AGG - chr7_2:62967168-62967187 Msa1067980:intron 60.0%
GAGTGGTTTCAGTGCCTGGG+TGG - chr7_2:62967277-62967296 Msa1067980:intron 60.0%
! GTGTGTGTGTGTGTGGTGGG+GGG - chr7_2:62967547-62967566 Msa1067980:intron 60.0%
! TGTGTGGTGGGGGGCTTGTT+CGG - chr7_2:62967556-62967575 Msa1067980:intron 60.0%
GCAGGAATCGTCCTCTCACG+TGG + chr7_2:62968208-62968227 None:intergenic 60.0%
GGACGCAAAGGAAGGCCAAG+GGG + chr7_2:62968250-62968269 None:intergenic 60.0%
CAGGACGCAAAGGAAGGCCA+AGG + chr7_2:62968252-62968271 None:intergenic 60.0%
CGTCCTGCGGCTTCAGCTAA+AGG + chr7_2:62969478-62969497 None:intergenic 60.0%
CGGGCTCAGTAAAGCCAAGG+AGG - chr7_2:62969563-62969582 Msa1067980:intron 60.0%
! GGACCGTATCCGGAGCATCC+TGG - chr7_2:62964255-62964274 Msa1067980:intron 65.0%
GGGCCTTGCCACCTTGGACT+GGG + chr7_2:62967225-62967244 None:intergenic 65.0%
CTTGAGGGGCCTTGCCACCT+TGG + chr7_2:62967231-62967250 None:intergenic 65.0%
ACCTAGCAGACGCCGTCCTG+CGG + chr7_2:62969491-62969510 None:intergenic 65.0%
GCGAGCGAGGGGGGATCACT+AGG - chr7_2:62962962-62962981 Msa1067980:three_prime_UTR 70.0%
GGGGCCTTGCCACCTTGGAC+TGG + chr7_2:62967226-62967245 None:intergenic 70.0%
GCCGCAGGACGGCGTCTGCT+AGG - chr7_2:62969487-62969506 Msa1067980:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 62962944 62970192 62962944 ID=Msa1067980;Name=Msa1067980
chr7_2 mRNA 62962944 62970192 62962944 ID=Msa1067980-mRNA-1;Parent=Msa1067980;Name=Msa1067980-mRNA-1;_AED=0.06;_eAED=0.06;_QI=425|0.8|1|1|1|1|6|544|397
chr7_2 exon 62962944 62963769 62962944 ID=Msa1067980-mRNA-1:exon:12886;Parent=Msa1067980-mRNA-1
chr7_2 exon 62964866 62965183 62964866 ID=Msa1067980-mRNA-1:exon:12885;Parent=Msa1067980-mRNA-1
chr7_2 exon 62965825 62966115 62965825 ID=Msa1067980-mRNA-1:exon:12884;Parent=Msa1067980-mRNA-1
chr7_2 exon 62966402 62966521 62966402 ID=Msa1067980-mRNA-1:exon:12883;Parent=Msa1067980-mRNA-1
chr7_2 exon 62968771 62968928 62968771 ID=Msa1067980-mRNA-1:exon:12882;Parent=Msa1067980-mRNA-1
chr7_2 exon 62969743 62970192 62969743 ID=Msa1067980-mRNA-1:exon:12881;Parent=Msa1067980-mRNA-1
chr7_2 five_prime_UTR 62969768 62970192 62969768 ID=Msa1067980-mRNA-1:five_prime_utr;Parent=Msa1067980-mRNA-1
chr7_2 CDS 62969743 62969767 62969743 ID=Msa1067980-mRNA-1:cds;Parent=Msa1067980-mRNA-1
chr7_2 CDS 62968771 62968928 62968771 ID=Msa1067980-mRNA-1:cds;Parent=Msa1067980-mRNA-1
chr7_2 CDS 62966402 62966521 62966402 ID=Msa1067980-mRNA-1:cds;Parent=Msa1067980-mRNA-1
chr7_2 CDS 62965825 62966115 62965825 ID=Msa1067980-mRNA-1:cds;Parent=Msa1067980-mRNA-1
chr7_2 CDS 62964866 62965183 62964866 ID=Msa1067980-mRNA-1:cds;Parent=Msa1067980-mRNA-1
chr7_2 CDS 62963488 62963769 62963488 ID=Msa1067980-mRNA-1:cds;Parent=Msa1067980-mRNA-1
chr7_2 three_prime_UTR 62962944 62963487 62962944 ID=Msa1067980-mRNA-1:three_prime_utr;Parent=Msa1067980-mRNA-1
Gene Sequence

>Msa1067980

ATGGAATACGATGCCATCCCTCAAGAGGCAATGTGGCAAATGAGCTTGAGGCCAAGTGAAACAATGGAATCAGGACCGTATCCGGAGCATCCTGGAGAACCAGATTGTTCATATTACATAAGAACCGGCCTTTGTAGATTTGGAGCAACATGTCGGTTTAATCATCCTCCTAACAGGAAGCTGTACTATCTGAAAACAGGAACTTGCAAATTTGGAGCCACATGCAGGTTTCATCATCCTAAAGACAAGGCTGGGGTTGCTGGAAGAGTTGCCTTGAATATTTTAGGCTATCCACTCCGCCCAAATGAGTCTGAATGTGCTTATTATTTAAGAACTGGTCAATGCAAATTTGGGAACACTTGTAAATTTCACCATCCTCAACCAAGTAATATGGTACTTCCAATGAGAGGTTCTCCTGTTTATCCTACTGTCCAGTCTCCAACTACAGCAGGTCAGCAGTCATATGCGGCAGGAATTACAAATTGGTCTACTTCATCATATATTCCCAGTCCAAGGTGGCAAGGCCCCTCAAGTTATGCACCTTTAATTCTACCTCAAGGAGTGGTTTCAGTGCCTGGGTGGAGTACATACAATGGTCAAATGGGATCAGACAGTCCACAACAAACAATGAGAAATGATCAAACCTATGGAACTTCTCACCAAGGTGATCCAGAAAATGCAGGACTCCCAGGGGTATATTCTCAATACCGTTCTGGCTCTGTTCCAGTAGGATTCTATGCTTTGCAAAGGGAGAACATTTTTCCAGAGAGACCTGATCAGCCTGAATGCCAATTCTACATGAAGACTGGGGATTGCAAGTTCGGTGCTGTCTGTCGTTTTCACCATCCACGTGAGAGGACGATTCCTGCCCCTGATTGTGTTTTGAGTCCCCTTGGCCTTCCTTTGCGTCCTGGAGAACCACTTTGTGTATTCTATTCGCGGTATGGCATATGCAAATTTGGCCCAAGCTGCAAGTTTGACCATCCAATGGGAATCTTCACCTATAATGTATCTGCATCACCTTTAGCTGAAGCCGCAGGACGGCGTCTGCTAGGTTCTTCATCAGGAACTGCTGCATTAAGTTTATCATCAGAAGGACTTGTTGAGTCGGGCTCAGTAAAGCCAAGGAGGCTTTCATTATCAGAGACTAGACCGAATCCTTCCGGTGATGATGACATTGATGATGAGGGATAA
Protein sequence

>Msa1067980

MEYDAIPQEAMWQMSLRPSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESECAYYLRTGQCKFGNTCKFHHPQPSNMVLPMRGSPVYPTVQSPTTAGQQSYAAGITNWSTSSYIPSPRWQGPSSYAPLILPQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGTSHQGDPENAGLPGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYNVSASPLAEAAGRRLLGSSSGTAALSLSSEGLVESGSVKPRRLSLSETRPNPSGDDDIDDEG*