AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0336970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0336970 MtrunA17_Chr2g0323331 74.752 404 47 6 31 426 5 361 0.0 553
Msa0336970 MtrunA17_Chr2g0323351 59.036 166 53 5 1 151 58 223 3.17e-53 178
Msa0336970 MtrunA17_Chr2g0323351 59.783 92 30 3 154 241 137 225 7.24e-17 80.1
Msa0336970 MtrunA17_Chr2g0323351 56.842 95 33 5 237 326 135 226 6.07e-12 65.5
Msa0336970 MtrunA17_Chr4g0022901 39.791 191 75 5 1 152 59 248 3.90e-34 128
Msa0336970 MtrunA17_Chr4g0022911 32.520 246 113 6 1 235 59 262 9.18e-29 114
Msa0336970 MtrunA17_Chr4g0022931 36.073 219 95 6 1 198 59 253 1.69e-26 107
Msa0336970 MtrunA17_Chr1g0167691 38.095 168 76 4 1 158 58 207 4.86e-25 103
Msa0336970 MtrunA17_Chr1g0167661 56.977 86 29 1 1 78 58 143 2.50e-24 101
Msa0336970 MtrunA17_Chr4g0022891 36.471 170 77 8 1 149 58 217 1.63e-23 98.6
Msa0336970 MtrunA17_Chr7g0274581 67.742 62 20 0 1 62 58 119 1.75e-23 97.8
Msa0336970 MtrunA17_Chr1g0211161 67.213 61 20 0 1 61 59 119 3.08e-23 97.4
Msa0336970 MtrunA17_Chr7g0261281 68.852 61 19 0 2 62 59 119 4.18e-23 98.6
Msa0336970 MtrunA17_Chr4g0022881 36.709 158 85 4 1 149 58 209 4.54e-23 97.1
Msa0336970 MtrunA17_Chr1g0187761 62.500 72 25 1 1 72 58 127 5.82e-23 97.4
Msa0336970 MtrunA17_Chr4g0058631 67.213 61 20 0 1 61 58 118 9.71e-23 99.0
Msa0336970 MtrunA17_Chr1g0203411 50.000 96 43 1 1 91 58 153 1.39e-22 97.4
Msa0336970 MtrunA17_Chr4g0070611 46.429 112 48 1 1 100 58 169 1.74e-22 97.4
Msa0336970 MtrunA17_Chr5g0435101 65.574 61 21 0 1 61 57 117 2.36e-22 94.7
Msa0336970 MtrunA17_Chr3g0117091 65.574 61 21 0 1 61 58 118 2.77e-22 97.4
Msa0336970 MtrunA17_Chr8g0346561 61.538 65 25 0 1 65 58 122 3.07e-22 96.3
Msa0336970 MtrunA17_Chr4g0044421 65.574 61 21 0 1 61 58 118 3.75e-22 93.6
Msa0336970 MtrunA17_Chr4g0070641 64.407 59 21 0 1 59 58 116 2.67e-21 90.5
Msa0336970 MtrunA17_Chr4g0055981 65.517 58 20 0 1 58 101 158 2.96e-21 92.0
Msa0336970 MtrunA17_Chr1g0193371 45.045 111 43 3 1 111 58 150 3.49e-21 94.7
Msa0336970 MtrunA17_Chr1g0203441 60.317 63 25 0 1 63 59 121 3.91e-21 92.8
Msa0336970 MtrunA17_Chr7g0228891 64.407 59 21 0 1 59 58 116 6.42e-21 92.0
Msa0336970 MtrunA17_Chr7g0247131 67.241 58 19 0 2 59 25 82 9.72e-21 91.7
Msa0336970 MtrunA17_Chr4g0057031 63.333 60 22 0 2 61 59 118 1.04e-20 91.7
Msa0336970 MtrunA17_Chr5g0400821 53.521 71 32 1 1 70 59 129 1.13e-20 92.0
Msa0336970 MtrunA17_Chr3g0131121 61.017 59 23 0 1 59 58 116 1.23e-20 91.7
Msa0336970 MtrunA17_Chr4g0037141 56.667 60 26 0 1 60 58 117 1.68e-20 91.3
Msa0336970 MtrunA17_Chr8g0349261 67.797 59 19 0 2 60 61 119 2.22e-20 90.9
Msa0336970 MtrunA17_Chr3g0115821 63.333 60 22 0 2 61 59 118 2.58e-20 91.7
Msa0336970 MtrunA17_Chr2g0328771 61.538 65 24 1 1 65 66 129 2.74e-20 91.3
Msa0336970 MtrunA17_Chr1g0193801 62.712 59 22 0 1 59 58 116 3.12e-20 92.0
Msa0336970 MtrunA17_Chr7g0275911 61.017 59 23 0 1 59 58 116 3.73e-20 89.7
Msa0336970 MtrunA17_Chr7g0270891 62.712 59 22 0 1 59 58 116 4.36e-20 91.3
Msa0336970 MtrunA17_Chr4g0068061 38.636 132 49 3 1 100 58 189 4.53e-20 90.9
Msa0336970 MtrunA17_Chr7g0217741 66.667 60 20 0 2 61 59 118 5.87e-20 90.1
Msa0336970 MtrunA17_Chr6g0470971 59.016 61 25 0 1 61 60 120 6.95e-20 89.4
Msa0336970 MtrunA17_Chr7g0240821 61.017 59 23 0 1 59 47 105 7.05e-20 88.2
Msa0336970 MtrunA17_Chr2g0281071 61.667 60 23 0 2 61 60 119 7.05e-20 90.5
Msa0336970 MtrunA17_Chr4g0048511 61.667 60 23 0 2 61 60 119 8.22e-20 90.5
Msa0336970 MtrunA17_Chr3g0121241 60.000 60 24 0 1 60 88 147 8.66e-20 89.4
Msa0336970 MtrunA17_Chr8g0343831 59.677 62 25 0 1 62 54 115 8.96e-20 88.6
Msa0336970 MtrunA17_Chr4g0042671 65.000 60 21 0 2 61 59 118 9.61e-20 90.9
Msa0336970 MtrunA17_Chr7g0217221 63.934 61 22 0 2 62 59 119 1.32e-19 88.2
Msa0336970 MtrunA17_Chr5g0410961 60.000 60 24 0 2 61 59 118 1.50e-19 89.4
Msa0336970 MtrunA17_Chr2g0323411 60.000 60 24 0 2 61 59 118 1.51e-19 89.0
Msa0336970 MtrunA17_Chr4g0032401 63.492 63 22 1 1 63 63 124 1.53e-19 89.4
Msa0336970 MtrunA17_Chr6g0453471 65.000 60 21 0 2 61 59 118 1.54e-19 89.7
Msa0336970 MtrunA17_Chr3g0088461 64.407 59 21 0 1 59 68 126 1.92e-19 89.0
Msa0336970 MtrunA17_Chr1g0186061 60.345 58 23 0 1 58 66 123 2.11e-19 87.4
Msa0336970 MtrunA17_Chr1g0151941 55.556 63 28 0 1 63 59 121 2.54e-19 87.0
Msa0336970 MtrunA17_Chr3g0110351 61.667 60 23 0 2 61 59 118 3.18e-19 87.8
Msa0336970 MtrunA17_Chr5g0434571 41.593 113 60 2 2 108 95 207 3.31e-19 88.6
Msa0336970 MtrunA17_Chr5g0395281 60.000 60 24 0 2 61 59 118 3.37e-19 87.8
Msa0336970 MtrunA17_Chr5g0434901 60.714 56 22 0 1 56 19 74 3.58e-19 82.8
Msa0336970 MtrunA17_Chr3g0103281 62.069 58 22 0 2 59 59 116 3.74e-19 87.8
Msa0336970 MtrunA17_Chr2g0309911 62.712 59 22 0 2 60 58 116 4.23e-19 87.8
Msa0336970 MtrunA17_Chr1g0194951 61.017 59 23 0 1 59 58 116 4.42e-19 88.6
Msa0336970 MtrunA17_Chr1g0194301 36.296 135 55 3 1 107 79 210 4.99e-19 86.7
Msa0336970 MtrunA17_Chr4g0039971 61.667 60 23 0 2 61 60 119 5.04e-19 88.2
Msa0336970 MtrunA17_Chr3g0135311 50.617 81 39 1 1 80 59 139 6.40e-19 87.8
Msa0336970 MtrunA17_Chr8g0342541 60.000 60 24 0 1 60 58 117 1.05e-18 87.0
Msa0336970 MtrunA17_Chr8g0360111 63.636 55 20 0 1 55 71 125 1.18e-18 85.5
Msa0336970 MtrunA17_Chr8g0342481 60.000 60 24 0 1 60 59 118 1.26e-18 87.4
Msa0336970 MtrunA17_Chr8g0342521 58.333 60 25 0 1 60 58 117 1.35e-18 86.7
Msa0336970 MtrunA17_Chr1g0152011 36.697 109 66 2 1 109 59 164 1.44e-18 86.7
Msa0336970 MtrunA17_Chr1g0168661 60.345 58 23 0 1 58 67 124 1.50e-18 85.1
Msa0336970 MtrunA17_Chr7g0228231 57.895 57 24 0 1 57 60 116 1.95e-18 83.6
Msa0336970 MtrunA17_Chr8g0385321 55.932 59 26 0 1 59 58 116 1.98e-18 85.9
Msa0336970 MtrunA17_Chr1g0209661 54.286 70 31 1 1 69 73 142 2.06e-18 85.5
Msa0336970 MtrunA17_Chr3g0092401 63.333 60 22 0 2 61 60 119 2.13e-18 85.5
Msa0336970 MtrunA17_Chr1g0180391 58.621 58 24 0 1 58 65 122 2.36e-18 84.0
Msa0336970 MtrunA17_Chr5g0434931 56.667 60 26 0 1 60 81 140 3.00e-18 84.7
Msa0336970 MtrunA17_Chr8g0354661 40.404 99 49 2 2 90 84 182 3.04e-18 87.0
Msa0336970 MtrunA17_Chr8g0387421 58.065 62 26 0 1 62 58 119 3.23e-18 85.1
Msa0336970 MtrunA17_Chr2g0330041 60.000 60 24 0 1 60 58 117 3.34e-18 86.3
Msa0336970 MtrunA17_Chr4g0028311 50.000 72 35 1 1 71 59 130 9.56e-18 84.0
Msa0336970 MtrunA17_Chr7g0228991 58.333 60 25 0 1 60 75 134 1.02e-17 82.8
Msa0336970 MtrunA17_Chr6g0450101 52.239 67 31 1 1 67 60 125 1.10e-17 81.3
Msa0336970 MtrunA17_Chr4g0030881 51.562 64 31 0 1 64 60 123 1.38e-17 82.4
Msa0336970 MtrunA17_Chr5g0434911 55.000 60 27 0 1 60 67 126 1.59e-17 82.4
Msa0336970 MtrunA17_Chr5g0417821 57.377 61 26 0 1 61 53 113 1.81e-17 82.4
Msa0336970 MtrunA17_Chr1g0194291 41.593 113 48 3 1 113 67 161 1.90e-17 82.0
Msa0336970 MtrunA17_Chr4g0060721 57.812 64 27 0 2 65 60 123 2.65e-17 82.8
Msa0336970 MtrunA17_Chr6g0452271 55.000 60 27 0 2 61 59 118 3.86e-17 82.0
Msa0336970 MtrunA17_Chr2g0311221 66.038 53 18 0 1 53 60 112 4.33e-17 82.0
Msa0336970 MtrunA17_Chr7g0264641 56.667 60 26 0 1 60 59 118 4.36e-17 80.9
Msa0336970 MtrunA17_Chr5g0434831 56.667 60 26 0 1 60 53 112 4.52e-17 79.3
Msa0336970 MtrunA17_Chr6g0487491 51.471 68 25 1 1 60 59 126 5.31e-17 80.5
Msa0336970 MtrunA17_Chr7g0254411 61.667 60 23 0 2 61 59 118 5.36e-17 81.6
Msa0336970 MtrunA17_Chr3g0099131 54.386 57 26 0 2 58 88 144 6.75e-17 82.8
Msa0336970 MtrunA17_Chr3g0080861 46.914 81 30 2 2 69 84 164 8.96e-17 82.4
Msa0336970 MtrunA17_Chr6g0453211 65.385 52 18 0 2 53 59 110 1.70e-16 80.1
Msa0336970 MtrunA17_Chr5g0397231 64.706 51 18 0 1 51 58 108 1.74e-16 80.5
Msa0336970 MtrunA17_Chr7g0220341 55.000 60 27 0 1 60 73 132 1.74e-16 79.3
Msa0336970 MtrunA17_Chr7g0271241 66.667 51 17 0 1 51 58 108 1.79e-16 80.9
Msa0336970 MtrunA17_Chr5g0434841 55.000 60 27 0 1 60 66 125 2.65e-16 79.3
Msa0336970 MtrunA17_Chr2g0327821 51.724 58 28 0 1 58 52 109 5.43e-16 77.0
Msa0336970 MtrunA17_Chr4g0008551 43.023 86 47 1 2 87 82 165 1.13e-15 78.2
Msa0336970 MtrunA17_Chr7g0229101 57.143 56 24 0 1 56 18 73 1.25e-15 75.5
Msa0336970 MtrunA17_Chr4g0072751 56.604 53 23 0 1 53 59 111 1.51e-15 77.8
Msa0336970 MtrunA17_Chr7g0229131 37.500 128 60 4 1 109 18 144 1.56e-15 74.3
Msa0336970 MtrunA17_Chr2g0327351 56.604 53 23 0 1 53 59 111 1.93e-15 77.0
Msa0336970 MtrunA17_Chr1g0154031 51.613 62 30 0 2 63 123 184 2.40e-15 77.4
Msa0336970 MtrunA17_Chr3g0117511 31.667 180 101 6 2 165 227 400 6.10e-15 76.6
Msa0336970 MtrunA17_Chr4g0054391 54.902 51 23 0 1 51 59 109 7.68e-15 74.7
Msa0336970 MtrunA17_Chr5g0429661 37.168 113 57 3 2 112 166 266 1.16e-14 75.1
Msa0336970 MtrunA17_Chr3g0093811 61.702 47 18 0 13 59 40 86 1.64e-14 73.6
Msa0336970 MtrunA17_Chr2g0323321 80.000 35 7 0 1 35 57 91 1.81e-14 69.3
Msa0336970 MtrunA17_Chr2g0322521 61.404 57 22 0 2 58 76 132 2.33e-14 74.3
Msa0336970 MtrunA17_Chr4g0068921 46.667 75 39 1 1 75 70 143 7.70e-14 70.1
Msa0336970 MtrunA17_Chr6g0454921 50.877 57 28 0 2 58 59 115 7.96e-14 70.5
Msa0336970 MtrunA17_Chr2g0293911 46.667 75 39 1 1 75 70 143 8.10e-14 72.0
Msa0336970 MtrunA17_Chr5g0434871 59.091 44 18 0 17 60 2 45 8.95e-14 66.2
Msa0336970 MtrunA17_Chr3g0133601 54.386 57 26 0 2 58 81 137 1.20e-13 70.1
Msa0336970 MtrunA17_Chr4g0058991 43.478 69 38 1 2 69 253 321 1.64e-13 72.0
Msa0336970 MtrunA17_Chr7g0269831 57.627 59 25 0 1 59 58 116 3.72e-13 70.5
Msa0336970 MtrunA17_Chr8g0334881 55.172 58 25 1 1 57 56 113 4.78e-13 69.7
Msa0336970 MtrunA17_Chr1g0192411 44.828 58 32 0 1 58 58 115 7.33e-13 70.1
Msa0336970 MtrunA17_Chr7g0233061 36.082 97 58 2 2 96 222 316 7.61e-13 69.7
Msa0336970 MtrunA17_Chr5g0417621 32.323 99 67 0 1 99 177 275 8.19e-13 70.1
Msa0336970 MtrunA17_Chr5g0401731 47.368 57 30 0 2 58 59 115 1.34e-12 68.6
Msa0336970 MtrunA17_Chr4g0042501 40.541 74 43 1 2 75 149 221 1.40e-12 68.9
Msa0336970 MtrunA17_Chr4g0053431 47.368 57 30 0 2 58 49 105 1.60e-12 67.8
Msa0336970 MtrunA17_Chr5g0421201 48.000 50 26 0 13 62 15 64 2.45e-12 65.5
Msa0336970 MtrunA17_Chr6g0480581 50.877 57 28 0 1 57 47 103 3.22e-12 66.2
Msa0336970 MtrunA17_Chr7g0228531 36.000 125 55 4 2 114 264 375 1.83e-11 65.9
Msa0336970 MtrunA17_Chr7g0228401 35.238 105 64 3 2 104 323 425 3.12e-11 65.1
Msa0336970 MtrunA17_Chr4g0013361 47.619 63 31 2 1 62 56 117 3.39e-11 63.9
Msa0336970 MtrunA17_Chr5g0441131 45.614 57 30 1 2 57 56 112 3.45e-11 62.0
Msa0336970 MtrunA17_Chr3g0139671 44.828 58 32 0 2 59 129 186 5.26e-11 65.1
Msa0336970 MtrunA17_Chr7g0238631 46.552 58 31 0 2 59 157 214 8.05e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0336970 AT3G23250.2 45.082 122 64 1 1 119 1 122 3.99e-28 111
Msa0336970 AT3G23250.1 45.082 122 64 1 1 119 58 179 6.64e-27 109
Msa0336970 AT2G31180.1 43.791 153 66 4 1 149 58 194 1.38e-25 105
Msa0336970 AT5G14750.4 43.885 139 75 3 1 137 1 138 6.95e-25 100
Msa0336970 AT5G14750.2 43.885 139 75 3 1 137 1 138 6.95e-25 100
Msa0336970 AT5G14750.3 43.885 139 75 3 1 137 28 165 3.27e-24 99.0
Msa0336970 AT5G14750.1 42.759 145 68 4 1 137 62 199 1.95e-23 97.8
Msa0336970 AT1G16490.1 69.492 59 18 0 1 59 60 118 7.07e-23 98.2
Msa0336970 AT1G06180.1 71.186 59 17 0 1 59 58 116 1.63e-22 96.3
Msa0336970 AT5G35550.2 56.410 78 34 0 2 79 64 141 1.93e-22 96.7
Msa0336970 AT3G12820.2 64.516 62 22 0 1 62 12 73 4.38e-22 93.6
Msa0336970 AT5G35550.1 56.410 78 34 0 2 79 61 138 5.92e-22 95.1
Msa0336970 AT1G22640.3 60.000 60 24 0 1 60 1 60 6.15e-22 93.6
Msa0336970 AT3G27920.1 58.462 65 27 0 1 65 60 124 1.52e-21 93.2
Msa0336970 AT3G12820.1 64.516 62 22 0 1 62 60 121 1.53e-21 93.6
Msa0336970 AT5G15310.4 68.333 60 19 0 2 61 59 118 1.60e-21 93.6
Msa0336970 AT5G15310.2 68.333 60 19 0 2 61 59 118 1.99e-21 94.7
Msa0336970 AT5G15310.1 68.333 60 19 0 2 61 59 118 2.00e-21 95.1
Msa0336970 AT1G22640.1 60.000 60 24 0 1 60 58 117 2.63e-21 93.2
Msa0336970 AT5G40330.1 64.407 59 21 0 1 59 58 116 2.96e-21 92.0
Msa0336970 AT1G79180.1 65.574 61 21 0 1 61 60 120 3.35e-21 93.6
Msa0336970 AT5G12870.1 63.934 61 22 0 1 61 64 124 4.32e-21 93.2
Msa0336970 AT1G79180.2 64.516 62 22 0 1 62 93 154 5.57e-21 93.6
Msa0336970 AT3G13540.1 56.452 62 27 0 1 62 69 130 6.43e-21 92.0
Msa0336970 AT4G28110.1 60.000 60 24 0 2 61 59 118 7.85e-21 92.4
Msa0336970 AT4G34990.1 59.016 61 25 0 1 61 58 118 8.33e-21 92.0
Msa0336970 AT4G38620.1 58.333 60 25 0 1 60 58 117 9.44e-21 92.0
Msa0336970 AT3G01140.2 68.333 60 19 0 2 61 59 118 9.46e-21 93.2
Msa0336970 AT1G35515.1 40.000 115 67 2 1 113 58 172 1.34e-20 90.1
Msa0336970 AT5G52600.1 66.667 57 19 0 2 58 59 115 1.35e-20 89.7
Msa0336970 AT3G01140.1 68.333 60 19 0 2 61 102 161 1.46e-20 93.2
Msa0336970 AT4G09460.1 60.000 60 24 0 1 60 58 117 1.85e-20 90.5
Msa0336970 AT5G07700.1 46.491 114 57 1 2 115 59 168 2.13e-20 92.0
Msa0336970 AT5G07700.2 46.491 114 57 1 2 115 59 168 2.13e-20 92.0
Msa0336970 AT5G16770.4 63.333 60 22 0 2 61 59 118 2.24e-20 92.0
Msa0336970 AT5G16770.3 63.333 60 22 0 2 61 59 118 2.24e-20 92.0
Msa0336970 AT5G16770.1 63.333 60 22 0 2 61 59 118 2.71e-20 92.0
Msa0336970 AT5G16770.2 63.333 60 22 0 2 61 59 118 2.71e-20 92.0
Msa0336970 AT3G61250.1 64.407 59 21 0 2 60 59 117 4.13e-20 90.9
Msa0336970 AT3G08500.1 66.102 59 20 0 1 59 76 134 4.24e-20 91.3
Msa0336970 AT5G26660.2 55.405 74 24 1 1 74 27 91 4.48e-20 90.9
Msa0336970 AT2G16720.1 58.333 60 25 0 1 60 58 117 5.12e-20 89.7
Msa0336970 AT1G71030.2 58.333 60 25 0 2 61 13 72 5.22e-20 87.8
Msa0336970 AT5G65230.1 63.333 60 22 0 2 61 59 118 6.46e-20 90.5
Msa0336970 AT1G56160.1 66.102 59 20 0 1 59 60 118 6.71e-20 90.1
Msa0336970 AT1G71030.1 58.333 60 25 0 2 61 27 86 7.57e-20 87.4
Msa0336970 AT1G74430.1 61.290 62 24 0 1 62 58 119 8.19e-20 89.4
Msa0336970 AT5G54230.1 61.667 60 23 0 2 61 59 118 9.47e-20 90.1
Msa0336970 AT4G05100.1 60.000 60 24 0 2 61 60 119 1.25e-19 89.7
Msa0336970 AT5G26660.1 55.405 74 24 1 1 74 58 122 1.27e-19 90.1
Msa0336970 AT4G01680.3 62.712 59 22 0 1 59 58 116 1.51e-19 87.8
Msa0336970 AT5G06100.1 59.649 57 23 0 2 58 79 135 2.10e-19 90.5
Msa0336970 AT3G02940.2 61.667 60 23 0 2 61 59 118 2.31e-19 88.6
Msa0336970 AT3G02940.1 61.667 60 23 0 2 61 59 118 2.72e-19 88.6
Msa0336970 AT3G02940.3 61.667 60 23 0 2 61 59 118 2.72e-19 88.6
Msa0336970 AT1G57560.2 55.738 61 27 0 1 61 58 118 2.95e-19 87.8
Msa0336970 AT5G06100.5 59.649 57 23 0 2 58 79 135 2.95e-19 90.5
Msa0336970 AT5G06100.2 59.649 57 23 0 2 58 79 135 2.95e-19 90.5
Msa0336970 AT5G06100.3 59.649 57 23 0 2 58 79 135 2.95e-19 90.5
Msa0336970 AT5G06100.4 59.649 57 23 0 2 58 79 135 2.95e-19 90.5
Msa0336970 AT5G60890.1 63.793 58 21 0 2 59 59 116 3.48e-19 87.8
Msa0336970 AT1G57560.1 55.738 61 27 0 1 61 58 118 3.71e-19 88.2
Msa0336970 AT5G62320.1 40.000 105 54 1 2 106 67 162 4.59e-19 86.7
Msa0336970 AT4G12350.1 60.000 60 24 0 2 61 59 118 4.59e-19 87.4
Msa0336970 AT4G01680.1 62.712 59 22 0 1 59 58 116 4.69e-19 88.2
Msa0336970 AT3G49690.1 58.333 60 25 0 1 60 59 118 4.72e-19 87.8
Msa0336970 AT4G22680.1 60.000 60 24 0 2 61 59 118 4.91e-19 87.0
Msa0336970 AT3G62610.1 61.017 59 23 0 1 59 58 116 4.99e-19 88.2
Msa0336970 AT3G12720.1 58.333 60 25 0 1 60 68 127 5.59e-19 87.4
Msa0336970 AT4G01680.2 62.712 59 22 0 1 59 70 128 5.79e-19 88.2
Msa0336970 AT4G17785.1 55.738 61 27 0 1 61 59 119 5.97e-19 88.2
Msa0336970 AT5G52260.1 59.677 62 25 0 1 62 58 119 6.33e-19 86.7
Msa0336970 AT4G17785.2 55.738 61 27 0 1 61 59 119 6.37e-19 88.2
Msa0336970 AT1G66230.1 61.667 60 23 0 2 61 59 118 6.47e-19 87.0
Msa0336970 AT1G09540.1 44.944 89 38 1 1 89 58 135 6.51e-19 88.2
Msa0336970 AT5G14340.1 61.017 59 23 0 1 59 70 128 7.30e-19 86.7
Msa0336970 AT5G16600.1 39.496 119 50 2 1 97 58 176 8.91e-19 87.4
Msa0336970 AT3G01530.1 57.895 57 24 0 1 57 71 127 9.07e-19 84.7
Msa0336970 AT5G61420.2 61.667 60 23 0 2 61 59 118 1.10e-18 87.4
Msa0336970 AT5G10280.1 61.667 60 23 0 2 61 59 118 1.18e-18 87.0
Msa0336970 AT1G18570.1 63.333 60 22 0 2 61 60 119 1.22e-18 87.4
Msa0336970 AT4G21440.1 58.333 60 25 0 2 61 59 118 1.24e-18 87.0
Msa0336970 AT1G74650.1 64.407 59 21 0 2 60 59 117 1.26e-18 87.0
Msa0336970 AT5G56110.1 62.069 58 22 0 2 59 59 116 1.53e-18 86.7
Msa0336970 AT3G13890.2 60.000 60 24 0 1 60 58 117 1.74e-18 87.0
Msa0336970 AT3G27810.2 57.377 61 25 1 1 61 17 76 1.77e-18 83.2
Msa0336970 AT3G13890.1 60.000 60 24 0 1 60 67 126 1.88e-18 87.0
Msa0336970 AT3G11440.2 56.140 57 25 0 2 58 88 144 2.14e-18 87.4
Msa0336970 AT5G40350.2 55.738 61 27 0 1 61 18 78 2.18e-18 82.8
Msa0336970 AT2G32460.1 63.158 57 21 0 2 58 65 121 2.40e-18 87.4
Msa0336970 AT2G32460.2 63.158 57 21 0 2 58 53 109 2.75e-18 87.4
Msa0336970 AT3G11440.3 56.140 57 25 0 2 58 88 144 3.02e-18 87.4
Msa0336970 AT3G11440.4 56.140 57 25 0 2 58 88 144 3.02e-18 87.4
Msa0336970 AT3G11440.1 56.140 57 25 0 2 58 88 144 3.02e-18 87.4
Msa0336970 AT5G65790.1 46.575 73 39 0 1 73 59 131 3.19e-18 86.3
Msa0336970 AT5G57620.1 48.000 75 39 0 1 75 59 133 3.42e-18 85.9
Msa0336970 AT1G74080.1 61.667 60 23 0 2 61 59 118 3.91e-18 85.5
Msa0336970 AT5G07690.1 62.712 59 22 0 2 60 59 117 4.08e-18 85.5
Msa0336970 AT5G49330.1 57.627 59 25 0 1 59 58 116 4.60e-18 85.5
Msa0336970 AT5G40350.1 55.738 61 27 0 1 61 63 123 5.33e-18 82.8
Msa0336970 AT3G27810.1 57.377 61 25 1 1 61 66 125 5.40e-18 83.2
Msa0336970 AT1G63910.1 59.016 61 25 0 1 61 58 118 5.85e-18 85.5
Msa0336970 AT3G47600.2 61.667 60 23 0 2 61 53 112 6.07e-18 84.7
Msa0336970 AT3G30210.1 43.519 108 52 2 1 108 73 171 6.17e-18 84.0
Msa0336970 AT1G34670.1 60.000 60 24 0 2 61 59 118 6.81e-18 85.1
Msa0336970 AT3G24310.1 60.345 58 23 0 1 58 64 121 7.67e-18 83.6
Msa0336970 AT4G13480.1 60.345 58 23 0 1 58 52 109 8.83e-18 83.2
Msa0336970 AT5G62470.1 61.667 60 23 0 2 61 58 117 1.08e-17 84.3
Msa0336970 AT3G47600.1 61.667 60 23 0 2 61 59 118 1.21e-17 84.0
Msa0336970 AT3G28910.1 61.667 60 23 0 2 61 59 118 1.21e-17 84.0
Msa0336970 AT5G62470.2 61.667 60 23 0 2 61 59 118 1.22e-17 84.3
Msa0336970 AT4G37780.1 52.174 69 29 1 1 69 59 123 1.28e-17 83.6
Msa0336970 AT1G68320.1 56.897 58 25 0 1 58 65 122 1.32e-17 83.2
Msa0336970 AT1G48000.1 57.895 57 24 0 1 57 78 134 1.42e-17 82.4
Msa0336970 AT4G26930.1 57.143 56 24 0 2 57 66 121 1.50e-17 84.3
Msa0336970 AT2G47460.1 54.237 59 27 0 1 59 58 116 1.54e-17 84.3
Msa0336970 AT5G23000.1 53.333 60 28 0 1 60 59 118 1.56e-17 83.6
Msa0336970 AT5G59780.2 55.172 58 26 0 1 58 33 90 1.68e-17 81.3
Msa0336970 AT2G47190.1 38.583 127 58 4 1 127 66 172 1.72e-17 82.8
Msa0336970 AT3G46130.3 55.172 58 26 0 1 58 23 80 2.07e-17 81.3
Msa0336970 AT1G25340.2 34.247 146 78 2 1 137 59 195 2.44e-17 82.4
Msa0336970 AT3G46130.4 55.172 58 26 0 1 58 33 90 2.46e-17 81.3
Msa0336970 AT1G25340.1 34.247 146 78 2 1 137 64 200 2.78e-17 82.4
Msa0336970 AT4G25560.1 53.226 62 29 0 1 62 56 117 2.80e-17 82.0
Msa0336970 AT5G59780.3 55.172 58 26 0 1 58 54 111 2.93e-17 81.3
Msa0336970 AT5G55020.1 53.226 62 29 0 2 63 73 134 3.83e-17 84.0
Msa0336970 AT3G46130.1 55.172 58 26 0 1 58 55 112 3.97e-17 81.3
Msa0336970 AT1G18710.1 55.932 59 26 0 1 59 58 116 4.44e-17 81.3
Msa0336970 AT1G66370.1 43.750 96 41 3 1 92 54 140 4.74e-17 80.9
Msa0336970 AT1G25340.3 34.247 146 78 2 1 137 59 195 4.75e-17 82.0
Msa0336970 AT3G48920.1 57.895 57 24 0 1 57 64 120 5.34e-17 80.9
Msa0336970 AT2G36890.1 52.381 63 30 0 1 63 59 121 7.12e-17 81.3
Msa0336970 AT2G36890.2 52.381 63 30 0 1 63 100 162 1.27e-16 81.3
Msa0336970 AT1G08810.1 61.667 60 23 0 2 61 59 118 1.32e-16 80.1
Msa0336970 AT3G53200.2 56.897 58 25 0 1 58 22 79 1.61e-16 78.2
Msa0336970 AT5G11050.1 32.653 196 100 6 2 189 149 320 2.18e-16 81.3
Msa0336970 AT3G53200.1 56.897 58 25 0 1 58 55 112 3.37e-16 78.2
Msa0336970 AT3G28470.1 59.615 52 21 0 2 53 59 110 2.45e-15 77.0
Msa0336970 AT2G26960.1 54.386 57 26 0 1 57 66 122 4.07e-15 77.4
Msa0336970 AT1G66380.1 52.174 69 33 0 1 69 54 122 5.18e-15 72.4
Msa0336970 AT1G66380.3 52.174 69 33 0 1 69 21 89 6.03e-15 70.9
Msa0336970 AT3G27785.1 46.154 65 35 0 2 66 233 297 2.13e-14 75.1
Msa0336970 AT4G18770.1 43.478 69 38 1 2 69 261 329 2.46e-14 75.1
Msa0336970 AT5G40360.1 46.970 66 33 1 2 67 202 265 4.70e-14 73.6
Msa0336970 AT3G09230.1 50.769 65 32 0 2 66 99 163 5.11e-14 73.9
Msa0336970 AT3G06490.1 46.667 75 39 1 1 75 65 138 1.31e-13 72.0
Msa0336970 AT5G58850.1 41.333 75 41 1 2 76 149 220 1.40e-13 72.8
Msa0336970 AT5G49620.1 46.667 75 39 1 1 75 72 145 2.52e-13 70.9
Msa0336970 AT1G69560.2 44.286 70 38 1 2 71 167 235 2.98e-13 71.2
Msa0336970 AT2G25230.1 46.875 64 32 1 2 65 70 131 3.10e-13 69.3
Msa0336970 AT1G69560.1 44.286 70 38 1 2 71 151 219 3.16e-13 70.9
Msa0336970 AT4G25560.2 56.522 46 20 0 16 61 5 50 1.07e-12 67.4
Msa0336970 AT5G59780.1 58.140 43 18 0 16 58 4 46 1.47e-12 66.2
Msa0336970 AT1G26780.2 41.333 75 43 1 2 76 142 215 1.71e-12 68.9
Msa0336970 AT2G26950.1 50.980 51 25 0 1 51 62 112 2.14e-12 68.9
Msa0336970 AT1G26780.1 40.789 76 44 1 1 76 141 215 2.24e-12 67.8
Msa0336970 AT1G56650.1 50.000 70 35 0 1 70 54 123 2.35e-12 67.0
Msa0336970 AT3G46130.2 58.140 43 18 0 16 58 4 46 2.53e-12 65.9
Msa0336970 AT1G17950.1 50.000 58 29 0 1 58 48 105 4.99e-12 66.2
Msa0336970 AT1G66390.1 55.172 58 26 0 1 58 54 111 5.13e-12 66.2
Msa0336970 AT3G55730.1 48.276 58 30 0 2 59 100 157 8.25e-12 67.0
Msa0336970 AT5G11510.2 44.828 58 32 0 2 59 125 182 9.85e-12 67.4
Msa0336970 AT5G11510.3 44.828 58 32 0 2 59 125 182 9.96e-12 67.8
Msa0336970 AT5G11510.1 44.828 58 32 0 2 59 125 182 9.96e-12 67.8
Msa0336970 AT5G11510.4 44.828 58 32 0 2 59 125 182 9.96e-12 67.8
Msa0336970 AT5G11510.5 44.828 58 32 0 2 59 125 182 1.02e-11 67.4
Msa0336970 AT5G40430.1 44.118 68 33 2 2 69 97 159 1.03e-11 65.5
Msa0336970 AT2G39880.1 49.123 57 29 0 2 58 94 150 1.17e-11 66.2
Msa0336970 AT4G37260.1 45.614 57 31 0 2 58 57 113 1.60e-11 65.5
Msa0336970 AT2G23290.1 47.368 57 30 0 2 58 57 113 2.22e-11 65.1
Msa0336970 AT4G33450.1 46.875 64 34 0 2 65 63 126 2.30e-11 64.3
Msa0336970 AT3G60460.1 50.000 58 28 1 1 57 57 114 3.00e-11 64.7
Msa0336970 AT5G02320.1 44.828 58 32 0 2 59 171 228 7.70e-11 64.3
Msa0336970 AT5G02320.2 44.828 58 32 0 2 59 171 228 7.70e-11 64.3

Find 111 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGAATAATTATCTTTA+TGG 0.087497 2_4:-56567412 None:intergenic
CTTCCATTGTAGGGTGATTA+TGG 0.138467 2_4:-56571157 None:intergenic
AGGATTTGAGTGAGAATTTC+TGG 0.155231 2_4:+56571615 Msa0336970:CDS
AATTGTTTATCCAGTCATTT+TGG 0.163774 2_4:-56571877 None:intergenic
TAAAACTGCTTCAAATTTCT+TGG 0.203457 2_4:-56570958 None:intergenic
TGGAATAATGCATTCATTAA+AGG 0.211338 2_4:-56571857 None:intergenic
ATTATTTGAATTTGAATCTT+TGG 0.220751 2_4:-56570916 None:intergenic
AAACTGTGAGTGAGAATTTC+TGG 0.228623 2_4:+56571363 Msa0336970:CDS
CAACAATTTATTCGAGAATA+TGG 0.247827 2_4:-56571985 None:intergenic
TATACGATACCTGCAAATTT+AGG 0.256637 2_4:-56567178 None:intergenic
GACAATAGACTTGCAATATT+AGG 0.292307 2_4:-56571473 None:intergenic
CGTGATTGCTTCAAATTTAC+CGG 0.299900 2_4:+56570800 Msa0336970:CDS
TACTACTACCACCAAATTCT+TGG 0.300654 2_4:-56567003 None:intergenic
TTCCATTGTAGGGTGATTAT+GGG 0.310853 2_4:-56571156 None:intergenic
TCCATGAATGCATCCATAAA+AGG 0.315903 2_4:-56571341 None:intergenic
ACAGGCACACACCAAGAATT+TGG 0.315908 2_4:+56566992 Msa0336970:five_prime_UTR
GTGATTCTTTACCTCATTAT+CGG 0.317179 2_4:-56570829 None:intergenic
TTCTTGGTTTCTTCCATTGT+AGG 0.324003 2_4:-56571167 None:intergenic
GTGTGTACTGTTCTATATAT+AGG 0.327451 2_4:-56566958 None:intergenic
TATGAATTGTCTACCATATA+TGG 0.329856 2_4:-56571128 None:intergenic
AATAGTGTAGCTTCTTCATT+TGG 0.329976 2_4:-56571911 None:intergenic
TAGGAAGTGTCTATCATATA+AGG 0.344927 2_4:-56571392 None:intergenic
AGATAGTGGACTACCAATAT+TGG 0.356029 2_4:-56571738 None:intergenic
AATAACATTGATCCCAATAT+TGG 0.363894 2_4:+56571725 Msa0336970:CDS
ATTGCTTATGTTACTAGGTA+TGG 0.365953 2_4:+56567133 Msa0336970:five_prime_UTR
CTATATATAGGGAGAATAAT+TGG 0.366642 2_4:-56566946 None:intergenic
CTAGGTATGGCTGTTGGAAT+TGG 0.368638 2_4:+56567146 Msa0336970:five_prime_UTR
CGACAACTACCTAAATTTGC+AGG 0.368724 2_4:+56567169 Msa0336970:five_prime_UTR
AGATAGTGAACTTGTAATAT+TGG 0.379651 2_4:-56571222 None:intergenic
TCTTGGCTTCTTCCAATGTA+AGG 0.383657 2_4:-56571682 None:intergenic
TTATTAGCTTCTTCCAATGT+AGG 0.385485 2_4:-56571422 None:intergenic
AGTTGATTGCTTATGTTACT+AGG 0.399699 2_4:+56567128 Msa0336970:five_prime_UTR
GCAGTATCCTGGAGTTCTGT+TGG 0.399944 2_4:-56567379 None:intergenic
AGAACCCCTTGTGACAATAA+TGG 0.416910 2_4:+56567067 Msa0336970:five_prime_UTR
GAGAATTCTTTGCAGTATCC+TGG 0.427022 2_4:-56567390 None:intergenic
GAAGAAGCTAATAAACTTGA+AGG 0.431001 2_4:+56571431 Msa0336970:CDS
CTTTATAAAACGCTTCTTCA+AGG 0.438316 2_4:-56570862 None:intergenic
TCTTGGTTTCTTCCATTGTA+GGG 0.439231 2_4:-56571166 None:intergenic
GATAGTGGACTACCAATATT+GGG 0.439321 2_4:-56571737 None:intergenic
TTCTTGGCTTCTTCCAATGT+AGG 0.440503 2_4:-56570942 None:intergenic
TGTGTACTGTTCTATATATA+GGG 0.452109 2_4:-56566957 None:intergenic
AGGTCATTGCCATCACGAAT+TGG 0.453004 2_4:-56571569 None:intergenic
GACAATAATGGATTGAGAAA+AGG 0.457500 2_4:+56567079 Msa0336970:five_prime_UTR
TTCCAATGTAGGGTGATCAT+AGG 0.461362 2_4:-56571411 None:intergenic
TCCATTGTAGGGTGATTATG+GGG 0.463999 2_4:-56571155 None:intergenic
TCTTCACAACCATCTTCAAA+TGG 0.465094 2_4:+56571758 Msa0336970:CDS
AAAGAAAATCCATTTGAAGA+TGG 0.472799 2_4:-56571767 None:intergenic
GAAGAAGCCAAGAAAATTGA+AGG 0.473385 2_4:+56571692 Msa0336970:CDS
TTTAGTTCTGTGTACGATGT+AGG 0.482529 2_4:+56571959 Msa0336970:CDS
TATTAGCTTCTTCCAATGTA+GGG 0.485827 2_4:-56571421 None:intergenic
CTCAATCCATTATTGTCACA+AGG 0.493237 2_4:-56567073 None:intergenic
TATTCATGTTCACACTCTGC+AGG 0.493605 2_4:-56571935 None:intergenic
AGTGTAGCTTCTTCATTTGG+AGG 0.506176 2_4:-56571908 None:intergenic
TCTTGGCTTCTTCCAATGTA+GGG 0.507921 2_4:-56570941 None:intergenic
TTCAAATAATCACCCTACAT+TGG 0.507933 2_4:+56570929 Msa0336970:CDS
CTGAGGCCAAATATCAAAAG+AGG 0.509978 2_4:+56567572 Msa0336970:CDS
ATGCATTATTCCAAAATGAC+TGG 0.510541 2_4:+56571867 Msa0336970:CDS
GAAGAAACCAAGAAACTTGA+CGG 0.523731 2_4:+56571176 Msa0336970:CDS
TCATATGATATTGTGGCAGA+AGG 0.527041 2_4:-56571542 None:intergenic
AAGAATATTAAGTCTAAGCA+TGG 0.528923 2_4:+56570882 Msa0336970:CDS
GAAGATGGTTGTGAAGATAG+TGG 0.529581 2_4:-56571752 None:intergenic
CAAGACAAATCGCTTGAAGC+TGG 0.530400 2_4:-56571026 None:intergenic
GTTCTCACCATGGTCTCTAA+AGG 0.539675 2_4:-56567049 None:intergenic
TGTATGTTTCCATAAAAGAA+AGG 0.541995 2_4:-56571085 None:intergenic
ACTTGTTCCAACAGAACTCC+AGG 0.542485 2_4:+56567372 Msa0336970:five_prime_UTR
GTGTAGCTTCTTCATTTGGA+GGG 0.543588 2_4:-56571907 None:intergenic
CCTTCATAATCACCTTACAT+TGG 0.543662 2_4:+56571670 Msa0336970:CDS
ATGTTACTAGGTATGGCTGT+TGG 0.545648 2_4:+56567140 Msa0336970:five_prime_UTR
TGAATGCATCCATAAAATGA+AGG 0.545826 2_4:-56571589 None:intergenic
ACCTCATTATCGGTTCTCCC+CGG 0.550386 2_4:-56570819 None:intergenic
GTGGGAAGAGCTGTAGACTA+AGG 0.551758 2_4:+56567537 Msa0336970:five_prime_UTR
CAAGAGAATCCACTTGAAGA+TGG 0.552848 2_4:-56571251 None:intergenic
TCACCATGGTCTCTAAAGGC+TGG 0.553133 2_4:-56567045 None:intergenic
CGATTTGTCTTGCATAACAA+TGG 0.553689 2_4:+56571037 Msa0336970:CDS
TGGTGTGTGCCTGTGTAGTG+TGG 0.555409 2_4:-56566983 None:intergenic
TTTCAGGGCTTGAAAGGTGT+GGG 0.557460 2_4:+56567519 Msa0336970:intron
TTCCTATGATCACCCTACAT+TGG 0.564285 2_4:+56571409 Msa0336970:CDS
CAATCCATTATTGTCACAAG+GGG 0.566200 2_4:-56567071 None:intergenic
TGCATTCTCTTGCATAACAA+TGG 0.567171 2_4:+56571514 Msa0336970:CDS
AGTGTATTATATTCTCTACA+TGG 0.568635 2_4:-56572040 None:intergenic
GGTGTGTGCCTGTGTAGTGT+GGG 0.570806 2_4:-56566982 None:intergenic
GTGATTGCTTCAAATTTACC+GGG 0.570836 2_4:+56570801 Msa0336970:CDS
CAAGAGAATGCACTTGAAGA+TGG 0.571011 2_4:-56571503 None:intergenic
TCTTCGCAACCATCTTCAAG+TGG 0.574077 2_4:+56571242 Msa0336970:CDS
ATGGATTGAGAAAAGGCACT+TGG 0.575990 2_4:+56567086 Msa0336970:five_prime_UTR
ATAATGAGGTAAAGAATCAC+TGG 0.577807 2_4:+56570832 Msa0336970:CDS
ACCGGGGAGAACCGATAATG+AGG 0.590459 2_4:+56570818 Msa0336970:CDS
AGGGAGAATAATTGGAGGAG+TGG 0.591305 2_4:-56566938 None:intergenic
CGGTAAATTTGAAGCAATCA+CGG 0.592595 2_4:-56570799 None:intergenic
CCAATGTAAGGTGATTATGA+AGG 0.594198 2_4:-56571670 None:intergenic
TCAATCCATTATTGTCACAA+GGG 0.597815 2_4:-56567072 None:intergenic
TATGAAAATCCAATTCGTGA+TGG 0.598521 2_4:+56571560 Msa0336970:CDS
ATTCATGTTCACACTCTGCA+GGG 0.598750 2_4:-56571934 None:intergenic
GGCACACACCAAGAATTTGG+TGG 0.600882 2_4:+56566995 Msa0336970:five_prime_UTR
TGTGAACTGTCTATCATACA+TGG 0.602200 2_4:-56571644 None:intergenic
GTCACAAGGGGTTCTCACCA+TGG 0.605010 2_4:-56567059 None:intergenic
AATAAATTGTTGCAGTGATG+TGG 0.607460 2_4:+56571996 Msa0336970:exon
CTACCAGCCTTTAGAGACCA+TGG 0.614533 2_4:+56567042 Msa0336970:five_prime_UTR
TATATAGGGAGAATAATTGG+AGG 0.617865 2_4:-56566943 None:intergenic
TGAGGCCAAATATCAAAAGA+GGG 0.619320 2_4:+56567573 Msa0336970:CDS
ATAATGCATTCATTAAAGGA+AGG 0.620751 2_4:-56571853 None:intergenic
TAAGGTGGATGAACTATCTG+AGG 0.621739 2_4:+56567555 Msa0336970:exon
TGAATGCATCCATAAAAGGA+AGG 0.624194 2_4:-56571337 None:intergenic
AAATTGTTGCAGTGATGTGG+TGG 0.626964 2_4:+56571999 Msa0336970:exon
AAAAGGCACTTGGACTCATG+AGG 0.629560 2_4:+56567096 Msa0336970:five_prime_UTR
AGGGAACTTTAATCAACAAG+AGG 0.630408 2_4:+56567592 Msa0336970:CDS
TACACACACCCACACTACAC+AGG 0.636302 2_4:+56566974 Msa0336970:five_prime_UTR
ATATTAAGTCTAAGCATGGA+AGG 0.647839 2_4:+56570886 Msa0336970:CDS
GGAAGAGCTGTAGACTAAGG+TGG 0.649277 2_4:+56567540 Msa0336970:five_prime_UTR
CCATTGTAGGGTGATTATGG+GGG 0.665807 2_4:-56571154 None:intergenic
TGATTGCTTCAAATTTACCG+GGG 0.729789 2_4:+56570802 Msa0336970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAATATTTTAAATTATT+AGG + chr2_4:56570720-56570739 Msa0336970:intron 0.0%
!! ATTAAGAATAATTATCTTTA+TGG - chr2_4:56567415-56567434 None:intergenic 10.0%
!! TTAATAATTAATGTGTAAAT+TGG + chr2_4:56567430-56567449 Msa0336970:intron 10.0%
!! AAAAAAAAATAATTCATTGT+TGG - chr2_4:56567861-56567880 None:intergenic 10.0%
!! ACTAATATAATATTGTAAAT+AGG - chr2_4:56568620-56568639 None:intergenic 10.0%
!!! TTTAATATAACTTTACTTTT+AGG + chr2_4:56568665-56568684 Msa0336970:intron 10.0%
!! CAAAAATCTAAATTAATTTA+AGG - chr2_4:56570044-56570063 None:intergenic 10.0%
!!! CAATTTTGAAATTATTTATT+TGG - chr2_4:56570450-56570469 None:intergenic 10.0%
!! AAATTGAAAAAAATAATCAT+AGG + chr2_4:56570464-56570483 Msa0336970:intron 10.0%
!! AATTGAAAAAAATAATCATA+GGG + chr2_4:56570465-56570484 Msa0336970:intron 10.0%
!!! ATAATATCATAATTTTTCGT+TGG + chr2_4:56567217-56567236 Msa0336970:intron 15.0%
!!! TTTTAAATTAATTTTCTCAC+AGG + chr2_4:56567347-56567366 Msa0336970:intron 15.0%
!!! AATAAATTAACATACTTTTG+TGG + chr2_4:56567730-56567749 Msa0336970:intron 15.0%
!!! ATTTTGTGTATTTTTATACA+AGG + chr2_4:56568512-56568531 Msa0336970:intron 15.0%
!! TTGCATATATTTAATTAGTT+TGG + chr2_4:56569344-56569363 Msa0336970:intron 15.0%
!!! AGTTTGTTTAGTTAATTTTT+AGG + chr2_4:56569475-56569494 Msa0336970:intron 15.0%
!!! GTTTGTTTAGTTAATTTTTA+GGG + chr2_4:56569476-56569495 Msa0336970:intron 15.0%
!! AGAATATATATAAAAGTGAA+TGG - chr2_4:56569697-56569716 None:intergenic 15.0%
!! AAATGTCATAATATATCAAA+AGG - chr2_4:56569727-56569746 None:intergenic 15.0%
!! ATTATGACATTTGATATTAT+TGG + chr2_4:56569735-56569754 Msa0336970:intron 15.0%
!! ATTGAAAAAAATAATCATAG+GGG + chr2_4:56570466-56570485 Msa0336970:intron 15.0%
!! TGGATAAAGTTAAAATTATA+AGG + chr2_4:56570661-56570680 Msa0336970:intron 15.0%
!! ATTATTTGAATTTGAATCTT+TGG - chr2_4:56570919-56570938 None:intergenic 15.0%
!!! GATATTTGATTTTCAATATT+AGG - chr2_4:56570999-56571018 None:intergenic 15.0%
!! ATGTTAATTTATTCTCTTTG+AGG - chr2_4:56567723-56567742 None:intergenic 20.0%
!!! TGAAATGTTTCTATATATGA+AGG - chr2_4:56567770-56567789 None:intergenic 20.0%
!!! ACTCATGAAACTTATATTTT+TGG + chr2_4:56568453-56568472 Msa0336970:intron 20.0%
!!! TATATTTTTGGATTGTTTGT+TGG + chr2_4:56568465-56568484 Msa0336970:intron 20.0%
!! TTATTATCAAACAATTGGTT+CGG - chr2_4:56568916-56568935 None:intergenic 20.0%
!! CAATCTTATTATCAAACAAT+TGG - chr2_4:56568921-56568940 None:intergenic 20.0%
!! TACTAACTTACAAACATAAA+GGG - chr2_4:56568959-56568978 None:intergenic 20.0%
!!! ATTGATTCTTTTGGATAATT+TGG + chr2_4:56568996-56569015 Msa0336970:intron 20.0%
!!! ATTTTTCACAAACACATTAT+GGG - chr2_4:56569037-56569056 None:intergenic 20.0%
!!! AAATAGAGAAATTTTGTAAG+AGG - chr2_4:56569810-56569829 None:intergenic 20.0%
!! GTTAGATAACAAATAAATCT+TGG - chr2_4:56569899-56569918 None:intergenic 20.0%
!!! TTGTTTGTTATATTCAACAT+CGG - chr2_4:56569933-56569952 None:intergenic 20.0%
!! AGATAAGCAAAATAAAGTTA+TGG + chr2_4:56570515-56570534 Msa0336970:intron 20.0%
!! TAAATAGAATTCTCTTACAA+AGG - chr2_4:56570571-56570590 None:intergenic 20.0%
!!! TGGATTTTCTTTTATAACAA+TGG + chr2_4:56571778-56571797 Msa0336970:CDS 20.0%
!!! AAAATTTTCATGTGATAGTA+TGG - chr2_4:56571816-56571835 None:intergenic 20.0%
! CTATATATAGGGAGAATAAT+TGG - chr2_4:56566949-56566968 None:intergenic 25.0%
! TGTGTACTGTTCTATATATA+GGG - chr2_4:56566960-56566979 None:intergenic 25.0%
!! ATCATAATTTTTCGTTGGAT+AGG + chr2_4:56567222-56567241 Msa0336970:intron 25.0%
! ATCAAACTTCATGAAAAACT+GGG + chr2_4:56567626-56567645 Msa0336970:CDS 25.0%
! AATATATCAACACTCTATCA+TGG + chr2_4:56567660-56567679 Msa0336970:intron 25.0%
!!! AAACATTTGCTATTTAAGAG+AGG - chr2_4:56567932-56567951 None:intergenic 25.0%
! AGACATACACTATACATATT+TGG - chr2_4:56567963-56567982 None:intergenic 25.0%
!! TAAGTTTGTTTGTTCAAAGT+GGG - chr2_4:56568006-56568025 None:intergenic 25.0%
!!! TTATAAAAGAGCCTTTTTTG+TGG + chr2_4:56568255-56568274 Msa0336970:intron 25.0%
!! TGGATGATTTTATGATTATG+TGG + chr2_4:56568485-56568504 Msa0336970:intron 25.0%
!! GGATGATTTTATGATTATGT+GGG + chr2_4:56568486-56568505 Msa0336970:intron 25.0%
!!! TTGAACATTACGCTTTATTT+TGG + chr2_4:56568535-56568554 Msa0336970:intron 25.0%
! TTTATGAGTAGATTTCTTCT+AGG + chr2_4:56568716-56568735 Msa0336970:intron 25.0%
! CTACTAACTTACAAACATAA+AGG - chr2_4:56568960-56568979 None:intergenic 25.0%
!!! AAGAACTCTATTGATTCTTT+TGG + chr2_4:56568987-56569006 Msa0336970:intron 25.0%
!! GATTTTTCACAAACACATTA+TGG - chr2_4:56569038-56569057 None:intergenic 25.0%
! ATTCAAATATGTCTTCAACA+AGG - chr2_4:56569060-56569079 None:intergenic 25.0%
! ATTAACAAATAGAGAAACCA+AGG - chr2_4:56569113-56569132 None:intergenic 25.0%
!! AATCAATTGATTCTTCTCTT+TGG + chr2_4:56569130-56569149 Msa0336970:intron 25.0%
!! CTCTATTTGTTCTTCTATTT+TGG + chr2_4:56569321-56569340 Msa0336970:intron 25.0%
!! AATTTCTCTATTTGTTAGAG+AGG + chr2_4:56569817-56569836 Msa0336970:intron 25.0%
! ACAAACAAAACATTCACATT+TGG + chr2_4:56569945-56569964 Msa0336970:intron 25.0%
!!! GTGAAAACACTTTTTTTTGA+AGG - chr2_4:56570699-56570718 None:intergenic 25.0%
! AATGATTTATAAAGTGCAGA+TGG + chr2_4:56570775-56570794 Msa0336970:intron 25.0%
! AAGAATATTAAGTCTAAGCA+TGG + chr2_4:56570882-56570901 Msa0336970:CDS 25.0%
! TAAAACTGCTTCAAATTTCT+TGG - chr2_4:56570961-56570980 None:intergenic 25.0%
! TGTATGTTTCCATAAAAGAA+AGG - chr2_4:56571088-56571107 None:intergenic 25.0%
!! TTCTTTTATGGAAACATACA+TGG + chr2_4:56571088-56571107 Msa0336970:CDS 25.0%
!! AAACATACATGGACAATTTT+TGG + chr2_4:56571099-56571118 Msa0336970:CDS 25.0%
! TATGAATTGTCTACCATATA+TGG - chr2_4:56571131-56571150 None:intergenic 25.0%
! AGATAGTGAACTTGTAATAT+TGG - chr2_4:56571225-56571244 None:intergenic 25.0%
!! TGAATTTTCATGTGATATAG+TGG - chr2_4:56571300-56571319 None:intergenic 25.0%
!! CATGAAAATTCAGTTTTTGA+TGG + chr2_4:56571308-56571327 Msa0336970:CDS 25.0%
!! TGGATTTTCATATGATATTG+TGG - chr2_4:56571552-56571571 None:intergenic 25.0%
!! AAAAACTCCTTCAATTTTCT+TGG - chr2_4:56571702-56571721 None:intergenic 25.0%
! AATAACATTGATCCCAATAT+TGG + chr2_4:56571725-56571744 Msa0336970:CDS 25.0%
! AAAGAAAATCCATTTGAAGA+TGG - chr2_4:56571770-56571789 None:intergenic 25.0%
! ATAATGCATTCATTAAAGGA+AGG - chr2_4:56571856-56571875 None:intergenic 25.0%
! TGGAATAATGCATTCATTAA+AGG - chr2_4:56571860-56571879 None:intergenic 25.0%
!! AATTGTTTATCCAGTCATTT+TGG - chr2_4:56571880-56571899 None:intergenic 25.0%
! CAACAATTTATTCGAGAATA+TGG - chr2_4:56571988-56572007 None:intergenic 25.0%
! AGTGTATTATATTCTCTACA+TGG - chr2_4:56572043-56572062 None:intergenic 25.0%
TATATAGGGAGAATAATTGG+AGG - chr2_4:56566946-56566965 None:intergenic 30.0%
GTGTGTACTGTTCTATATAT+AGG - chr2_4:56566961-56566980 None:intergenic 30.0%
TCAATCCATTATTGTCACAA+GGG - chr2_4:56567075-56567094 None:intergenic 30.0%
!! GACAATAATGGATTGAGAAA+AGG + chr2_4:56567079-56567098 Msa0336970:five_prime_UTR 30.0%
AGTTGATTGCTTATGTTACT+AGG + chr2_4:56567128-56567147 Msa0336970:five_prime_UTR 30.0%
ATTGCTTATGTTACTAGGTA+TGG + chr2_4:56567133-56567152 Msa0336970:five_prime_UTR 30.0%
TATACGATACCTGCAAATTT+AGG - chr2_4:56567181-56567200 None:intergenic 30.0%
AACATACGACATTGAATGAT+TGG - chr2_4:56567273-56567292 None:intergenic 30.0%
AACAATTCTCTCGAGTTTAA+AGG - chr2_4:56567500-56567519 None:intergenic 30.0%
! AAGTTCCCTCTTTTGATATT+TGG - chr2_4:56567581-56567600 None:intergenic 30.0%
CATCAAACTTCATGAAAAAC+TGG + chr2_4:56567625-56567644 Msa0336970:CDS 30.0%
TTCATGAAAAACTGGGTAAT+AGG + chr2_4:56567633-56567652 Msa0336970:CDS 30.0%
TCATAAAAAATCCATGGGTT+AGG - chr2_4:56567686-56567705 None:intergenic 30.0%
CGTGTTCATAAAAAATCCAT+GGG - chr2_4:56567691-56567710 None:intergenic 30.0%
TCGTGTTCATAAAAAATCCA+TGG - chr2_4:56567692-56567711 None:intergenic 30.0%
TTTCTATATATGAAGGCAAG+AGG - chr2_4:56567763-56567782 None:intergenic 30.0%
! TTGTTGGCTGATAACAATTT+CGG - chr2_4:56567845-56567864 None:intergenic 30.0%
! AAGTTTGTTTGTTCAAAGTG+GGG - chr2_4:56568005-56568024 None:intergenic 30.0%
! CTAAGTTTGTTTGTTCAAAG+TGG - chr2_4:56568007-56568026 None:intergenic 30.0%
!!! TTGCGTTTTTAAGTGTGAAT+CGG + chr2_4:56568119-56568138 Msa0336970:intron 30.0%
GAAAAATTGGACCACAAAAA+AGG - chr2_4:56568269-56568288 None:intergenic 30.0%
TCGGAAAGAAGAAGAAAAAT+TGG - chr2_4:56568282-56568301 None:intergenic 30.0%
TTCACAATAATGTGTTTGGT+CGG - chr2_4:56568386-56568405 None:intergenic 30.0%
CCAATTCACAATAATGTGTT+TGG - chr2_4:56568390-56568409 None:intergenic 30.0%
CCAAACACATTATTGTGAAT+TGG + chr2_4:56568387-56568406 Msa0336970:intron 30.0%
GCTAACAATGATACAAATCA+AGG - chr2_4:56568777-56568796 None:intergenic 30.0%
TAAGATTGAGCTTATGCTAT+TGG + chr2_4:56568933-56568952 Msa0336970:intron 30.0%
CTAATCTTTCTTCTCAATGT+TGG + chr2_4:56569167-56569186 Msa0336970:intron 30.0%
GATTAGATTTCTCACTTTAG+TGG + chr2_4:56569222-56569241 Msa0336970:intron 30.0%
!!! TCACTTTAGTGGCTTTTTTT+TGG + chr2_4:56569233-56569252 Msa0336970:intron 30.0%
ATAGAGAAAATCAGCCAAAT+GGG - chr2_4:56569432-56569451 None:intergenic 30.0%
TTGTAATAAGCTCAAAGCTT+TGG + chr2_4:56569505-56569524 Msa0336970:intron 30.0%
GAAAGTTTCACATATTAGAG+TGG - chr2_4:56569869-56569888 None:intergenic 30.0%
ACAAATAAATCTTGGCACTT+AGG - chr2_4:56569891-56569910 None:intergenic 30.0%
AACAAAACATTCACATTTGG+TGG + chr2_4:56569948-56569967 Msa0336970:intron 30.0%
AATTACTGTAAACCAGTTGA+TGG - chr2_4:56570008-56570027 None:intergenic 30.0%
CTTATATTCAAGACCAAAGA+AGG + chr2_4:56570205-56570224 Msa0336970:intron 30.0%
GAATAAGACAAGAAACTCAA+TGG + chr2_4:56570270-56570289 Msa0336970:intron 30.0%
! TTCGAAAGTTCTAATACAGA+TGG + chr2_4:56570641-56570660 Msa0336970:intron 30.0%
GTGATTCTTTACCTCATTAT+CGG - chr2_4:56570832-56570851 None:intergenic 30.0%
ATAATGAGGTAAAGAATCAC+TGG + chr2_4:56570832-56570851 Msa0336970:CDS 30.0%
CTTTATAAAACGCTTCTTCA+AGG - chr2_4:56570865-56570884 None:intergenic 30.0%
ATATTAAGTCTAAGCATGGA+AGG + chr2_4:56570886-56570905 Msa0336970:CDS 30.0%
TTCAAATAATCACCCTACAT+TGG + chr2_4:56570929-56570948 Msa0336970:CDS 30.0%
!! TGATAGTGACCTTTCTTTTA+TGG + chr2_4:56571076-56571095 Msa0336970:CDS 30.0%
!! TAGGAAGTGTCTATCATATA+AGG - chr2_4:56571395-56571414 None:intergenic 30.0%
GAAGAAGCTAATAAACTTGA+AGG + chr2_4:56571431-56571450 Msa0336970:CDS 30.0%
GACAATAGACTTGCAATATT+AGG - chr2_4:56571476-56571495 None:intergenic 30.0%
TATGAAAATCCAATTCGTGA+TGG + chr2_4:56571560-56571579 Msa0336970:CDS 30.0%
TGAATGCATCCATAAAATGA+AGG - chr2_4:56571592-56571611 None:intergenic 30.0%
! TTTTATGGATGCATTCATAG+AGG + chr2_4:56571595-56571614 Msa0336970:CDS 30.0%
ATGCATTATTCCAAAATGAC+TGG + chr2_4:56571867-56571886 Msa0336970:CDS 30.0%
AATAGTGTAGCTTCTTCATT+TGG - chr2_4:56571914-56571933 None:intergenic 30.0%
AATAAATTGTTGCAGTGATG+TGG + chr2_4:56571996-56572015 Msa0336970:exon 30.0%
TACTACTACCACCAAATTCT+TGG - chr2_4:56567006-56567025 None:intergenic 35.0%
CAATCCATTATTGTCACAAG+GGG - chr2_4:56567074-56567093 None:intergenic 35.0%
CTCAATCCATTATTGTCACA+AGG - chr2_4:56567076-56567095 None:intergenic 35.0%
! TGCAGGTATCGTATAAGAAA+AGG + chr2_4:56567186-56567205 Msa0336970:intron 35.0%
! GACATTGAATGATTGGTCAT+TGG - chr2_4:56567266-56567285 None:intergenic 35.0%
! AACTCGAGAGAATTGTTTTC+AGG + chr2_4:56567503-56567522 Msa0336970:intron 35.0%
! ACTCGAGAGAATTGTTTTCA+GGG + chr2_4:56567504-56567523 Msa0336970:intron 35.0%
!! AATTGTTTTCAGGGCTTGAA+AGG + chr2_4:56567513-56567532 Msa0336970:intron 35.0%
TGAGGCCAAATATCAAAAGA+GGG + chr2_4:56567573-56567592 Msa0336970:CDS 35.0%
AGGGAACTTTAATCAACAAG+AGG + chr2_4:56567592-56567611 Msa0336970:CDS 35.0%
! TGTTGGCTGATAACAATTTC+GGG - chr2_4:56567844-56567863 None:intergenic 35.0%
! TTTCTTCCATTTTGCTACCA+TGG + chr2_4:56567886-56567905 Msa0336970:intron 35.0%
TTTCCCTCATAGCTATTGAA+TGG + chr2_4:56568032-56568051 Msa0336970:intron 35.0%
TCACCATTCAATAGCTATGA+GGG - chr2_4:56568038-56568057 None:intergenic 35.0%
CACACGTTTAATGAGCTTAT+GGG - chr2_4:56568305-56568324 None:intergenic 35.0%
TCTATGGAAGATGAGTTGTT+TGG - chr2_4:56568349-56568368 None:intergenic 35.0%
GGTCGTTTAAGTGTAATCTA+TGG - chr2_4:56568365-56568384 None:intergenic 35.0%
!! AGAAAGCATTCCTAACGATA+TGG - chr2_4:56568829-56568848 None:intergenic 35.0%
TTGATGTTGGATCTATGTAG+CGG - chr2_4:56568861-56568880 None:intergenic 35.0%
!! TATATCAATGGGGTTGATGT+TGG - chr2_4:56568874-56568893 None:intergenic 35.0%
AACATCAACCCCATTGATAT+AGG + chr2_4:56568873-56568892 Msa0336970:intron 35.0%
TCGACTCAACCTATATCAAT+GGG - chr2_4:56568885-56568904 None:intergenic 35.0%
ACAAATAGAGAAACCAAGGA+GGG - chr2_4:56569109-56569128 None:intergenic 35.0%
AACAAATAGAGAAACCAAGG+AGG - chr2_4:56569110-56569129 None:intergenic 35.0%
!! CTTTGTTGATTCTTCCCATT+TGG + chr2_4:56569415-56569434 Msa0336970:intron 35.0%
CATAGAGAAAATCAGCCAAA+TGG - chr2_4:56569433-56569452 None:intergenic 35.0%
!! CATTTGGCTGATTTTCTCTA+TGG + chr2_4:56569431-56569450 Msa0336970:intron 35.0%
CTTAGGTGATCACATAAAGA+AGG - chr2_4:56569772-56569791 None:intergenic 35.0%
CTTCTTTATGTGATCACCTA+AGG + chr2_4:56569770-56569789 Msa0336970:intron 35.0%
GGTGAAATATGTCTAACCTT+AGG - chr2_4:56569789-56569808 None:intergenic 35.0%
AGTTTCACATATTAGAGTGG+TGG - chr2_4:56569866-56569885 None:intergenic 35.0%
!! ACCAAAGAAGGTATCTCTTT+AGG + chr2_4:56570217-56570236 Msa0336970:intron 35.0%
!! CCAAAGAAGGTATCTCTTTA+GGG + chr2_4:56570218-56570237 Msa0336970:intron 35.0%
AAGAAACTCAATGGATGAGA+TGG + chr2_4:56570279-56570298 Msa0336970:intron 35.0%
! CGGTAAATTTGAAGCAATCA+CGG - chr2_4:56570802-56570821 None:intergenic 35.0%
CGTGATTGCTTCAAATTTAC+CGG + chr2_4:56570800-56570819 Msa0336970:CDS 35.0%
GTGATTGCTTCAAATTTACC+GGG + chr2_4:56570801-56570820 Msa0336970:CDS 35.0%
TGATTGCTTCAAATTTACCG+GGG + chr2_4:56570802-56570821 Msa0336970:CDS 35.0%
CGATTTGTCTTGCATAACAA+TGG + chr2_4:56571037-56571056 Msa0336970:CDS 35.0%
! TTTTTGGACAGAGCCATATA+TGG + chr2_4:56571115-56571134 Msa0336970:CDS 35.0%
TTCCATTGTAGGGTGATTAT+GGG - chr2_4:56571159-56571178 None:intergenic 35.0%
TCTTGGTTTCTTCCATTGTA+GGG - chr2_4:56571169-56571188 None:intergenic 35.0%
TTCTTGGTTTCTTCCATTGT+AGG - chr2_4:56571170-56571189 None:intergenic 35.0%
GAAGAAACCAAGAAACTTGA+CGG + chr2_4:56571176-56571195 Msa0336970:CDS 35.0%
AAAAACTCCGTCAAGTTTCT+TGG - chr2_4:56571186-56571205 None:intergenic 35.0%
TGAATGCATCCATAAAAGGA+AGG - chr2_4:56571340-56571359 None:intergenic 35.0%
! TCCTTTTATGGATGCATTCA+TGG + chr2_4:56571340-56571359 Msa0336970:CDS 35.0%
TCCATGAATGCATCCATAAA+AGG - chr2_4:56571344-56571363 None:intergenic 35.0%
AAACTGTGAGTGAGAATTTC+TGG + chr2_4:56571363-56571382 Msa0336970:CDS 35.0%
TGCATTCTCTTGCATAACAA+TGG + chr2_4:56571514-56571533 Msa0336970:CDS 35.0%
TCATATGATATTGTGGCAGA+AGG - chr2_4:56571545-56571564 None:intergenic 35.0%
! TGGCAATGACCTTCATTTTA+TGG + chr2_4:56571580-56571599 Msa0336970:CDS 35.0%
AGGATTTGAGTGAGAATTTC+TGG + chr2_4:56571615-56571634 Msa0336970:CDS 35.0%
TGTGAACTGTCTATCATACA+TGG - chr2_4:56571647-56571666 None:intergenic 35.0%
CCAATGTAAGGTGATTATGA+AGG - chr2_4:56571673-56571692 None:intergenic 35.0%
CCTTCATAATCACCTTACAT+TGG + chr2_4:56571670-56571689 Msa0336970:CDS 35.0%
GAAGAAGCCAAGAAAATTGA+AGG + chr2_4:56571692-56571711 Msa0336970:CDS 35.0%
!! GATAGTGGACTACCAATATT+GGG - chr2_4:56571740-56571759 None:intergenic 35.0%
!! AGATAGTGGACTACCAATAT+TGG - chr2_4:56571741-56571760 None:intergenic 35.0%
TCTTCACAACCATCTTCAAA+TGG + chr2_4:56571758-56571777 Msa0336970:CDS 35.0%
!! TTTAGTTCTGTGTACGATGT+AGG + chr2_4:56571959-56571978 Msa0336970:CDS 35.0%
AGAACCCCTTGTGACAATAA+TGG + chr2_4:56567067-56567086 Msa0336970:five_prime_UTR 40.0%
!! ATGGATTGAGAAAAGGCACT+TGG + chr2_4:56567086-56567105 Msa0336970:five_prime_UTR 40.0%
ATGTTACTAGGTATGGCTGT+TGG + chr2_4:56567140-56567159 Msa0336970:five_prime_UTR 40.0%
CGACAACTACCTAAATTTGC+AGG + chr2_4:56567169-56567188 Msa0336970:five_prime_UTR 40.0%
GAGAATTCTTTGCAGTATCC+TGG - chr2_4:56567393-56567412 None:intergenic 40.0%
TATGCGCTATCTCAGTATCT+TGG + chr2_4:56567466-56567485 Msa0336970:intron 40.0%
TAAGGTGGATGAACTATCTG+AGG + chr2_4:56567555-56567574 Msa0336970:exon 40.0%
CTGAGGCCAAATATCAAAAG+AGG + chr2_4:56567572-56567591 Msa0336970:CDS 40.0%
!! GCTGATAACAATTTCGGGTT+GGG - chr2_4:56567839-56567858 None:intergenic 40.0%
AGAGAGGCAATCTATGAGAA+TGG - chr2_4:56567916-56567935 None:intergenic 40.0%
GTCACCATTCAATAGCTATG+AGG - chr2_4:56568039-56568058 None:intergenic 40.0%
!!! CGTTTTTAAGTGTGAATCGG+TGG + chr2_4:56568122-56568141 Msa0336970:intron 40.0%
!! CCGATTTCACTGATTCTGTT+GGG - chr2_4:56568197-56568216 None:intergenic 40.0%
CCCAACAGAATCAGTGAAAT+CGG + chr2_4:56568194-56568213 Msa0336970:intron 40.0%
!! TCCGATTTCACTGATTCTGT+TGG - chr2_4:56568198-56568217 None:intergenic 40.0%
CGTTTAATGAGCTTATGGGT+CGG - chr2_4:56568301-56568320 None:intergenic 40.0%
CCACACGTTTAATGAGCTTA+TGG - chr2_4:56568306-56568325 None:intergenic 40.0%
CCATAAGCTCATTAAACGTG+TGG + chr2_4:56568303-56568322 Msa0336970:intron 40.0%
!! GGTCATGTGACTTGTTCTAT+TGG - chr2_4:56568805-56568824 None:intergenic 40.0%
AAGCATTCCTAACGATATGG+AGG - chr2_4:56568826-56568845 None:intergenic 40.0%
CGACTCAACCTATATCAATG+GGG - chr2_4:56568884-56568903 None:intergenic 40.0%
! GTCGACTCAACCTATATCAA+TGG - chr2_4:56568886-56568905 None:intergenic 40.0%
! CTGATTTTCTCTATGGCTGA+TGG + chr2_4:56569438-56569457 Msa0336970:intron 40.0%
TTGTTGCATCGTGAGTTTGA+AGG + chr2_4:56569608-56569627 Msa0336970:intron 40.0%
TGTTGCATCGTGAGTTTGAA+GGG + chr2_4:56569609-56569628 Msa0336970:intron 40.0%
ACTAACTTCTCACCATCAAC+TGG + chr2_4:56569993-56570012 Msa0336970:intron 40.0%
CCCTAAAGAGATACCTTCTT+TGG - chr2_4:56570221-56570240 None:intergenic 40.0%
!! GTATCTCTTTAGGGTTCGTT+TGG + chr2_4:56570227-56570246 Msa0336970:intron 40.0%
TCTTGGCTTCTTCCAATGTA+GGG - chr2_4:56570944-56570963 None:intergenic 40.0%
TTCTTGGCTTCTTCCAATGT+AGG - chr2_4:56570945-56570964 None:intergenic 40.0%
TCCATTGTAGGGTGATTATG+GGG - chr2_4:56571158-56571177 None:intergenic 40.0%
CTTCCATTGTAGGGTGATTA+TGG - chr2_4:56571160-56571179 None:intergenic 40.0%
CAAGAGAATCCACTTGAAGA+TGG - chr2_4:56571254-56571273 None:intergenic 40.0%
! TGGCAATGACCTTCCTTTTA+TGG + chr2_4:56571328-56571347 Msa0336970:CDS 40.0%
CAAGAGAATGCACTTGAAGA+TGG - chr2_4:56571506-56571525 None:intergenic 40.0%
TCTTGGCTTCTTCCAATGTA+AGG - chr2_4:56570944-56570963 None:intergenic 40.0%
GAAGATGGTTGTGAAGATAG+TGG - chr2_4:56571755-56571774 None:intergenic 40.0%
GTGTAGCTTCTTCATTTGGA+GGG - chr2_4:56571910-56571929 None:intergenic 40.0%
AGTGTAGCTTCTTCATTTGG+AGG - chr2_4:56571911-56571930 None:intergenic 40.0%
ATTCATGTTCACACTCTGCA+GGG - chr2_4:56571937-56571956 None:intergenic 40.0%
TATTCATGTTCACACTCTGC+AGG - chr2_4:56571938-56571957 None:intergenic 40.0%
AAATTGTTGCAGTGATGTGG+TGG + chr2_4:56571999-56572018 Msa0336970:exon 40.0%
AGGGAGAATAATTGGAGGAG+TGG - chr2_4:56566941-56566960 None:intergenic 45.0%
ACAGGCACACACCAAGAATT+TGG + chr2_4:56566992-56567011 Msa0336970:five_prime_UTR 45.0%
GTTCTCACCATGGTCTCTAA+AGG - chr2_4:56567052-56567071 None:intergenic 45.0%
!! AAAAGGCACTTGGACTCATG+AGG + chr2_4:56567096-56567115 Msa0336970:five_prime_UTR 45.0%
CTAGGTATGGCTGTTGGAAT+TGG + chr2_4:56567146-56567165 Msa0336970:five_prime_UTR 45.0%
ACTTGTTCCAACAGAACTCC+AGG + chr2_4:56567372-56567391 Msa0336970:five_prime_UTR 45.0%
!! TTTTCAGGGCTTGAAAGGTG+TGG + chr2_4:56567518-56567537 Msa0336970:intron 45.0%
! TTTCAGGGCTTGAAAGGTGT+GGG + chr2_4:56567519-56567538 Msa0336970:intron 45.0%
! GGCTGATAACAATTTCGGGT+TGG - chr2_4:56567840-56567859 None:intergenic 45.0%
TCTATGAGAATGGCAAGCCA+TGG - chr2_4:56567906-56567925 None:intergenic 45.0%
ATCAGAGCTTGCAGATTGAG+TGG + chr2_4:56568164-56568183 Msa0336970:intron 45.0%
CACATGACCTCCATATCGTT+AGG + chr2_4:56568816-56568835 Msa0336970:intron 45.0%
! TATAGGTTGAGTCGACGACT+TGG + chr2_4:56568890-56568909 Msa0336970:intron 45.0%
ATAGAGAAACCAAGGAGGGA+GGG - chr2_4:56569105-56569124 None:intergenic 45.0%
AATAGAGAAACCAAGGAGGG+AGG - chr2_4:56569106-56569125 None:intergenic 45.0%
!! TCTCTTTAGGGTTCGTTTGG+TGG + chr2_4:56570230-56570249 Msa0336970:intron 45.0%
CAAGACAAATCGCTTGAAGC+TGG - chr2_4:56571029-56571048 None:intergenic 45.0%
CCATTGTAGGGTGATTATGG+GGG - chr2_4:56571157-56571176 None:intergenic 45.0%
TCTTCGCAACCATCTTCAAG+TGG + chr2_4:56571242-56571261 Msa0336970:CDS 45.0%
AGGTCATTGCCATCACGAAT+TGG - chr2_4:56571572-56571591 None:intergenic 45.0%
!! AAAAATCTAAATTAATTTAA+GGG - chr2_4:56570043-56570062 None:intergenic 5.0%
!!! AAAAATATCAAAAATTATTT+TGG - chr2_4:56570374-56570393 None:intergenic 5.0%
!!! AAATTATTTCATTAAATTTT+AGG - chr2_4:56570397-56570416 None:intergenic 5.0%
TACACACACCCACACTACAC+AGG + chr2_4:56566974-56566993 Msa0336970:five_prime_UTR 50.0%
GGCACACACCAAGAATTTGG+TGG + chr2_4:56566995-56567014 Msa0336970:five_prime_UTR 50.0%
! CTACCAGCCTTTAGAGACCA+TGG + chr2_4:56567042-56567061 Msa0336970:five_prime_UTR 50.0%
! TCACCATGGTCTCTAAAGGC+TGG - chr2_4:56567048-56567067 None:intergenic 50.0%
GCAGTATCCTGGAGTTCTGT+TGG - chr2_4:56567382-56567401 None:intergenic 50.0%
GTGGGAAGAGCTGTAGACTA+AGG + chr2_4:56567537-56567556 Msa0336970:five_prime_UTR 50.0%
GGAAGAGCTGTAGACTAAGG+TGG + chr2_4:56567540-56567559 Msa0336970:five_prime_UTR 50.0%
CTCTATCATGGCCTAACCCA+TGG + chr2_4:56567672-56567691 Msa0336970:intron 50.0%
GGCAAGCCATGGTAGCAAAA+TGG - chr2_4:56567895-56567914 None:intergenic 50.0%
GGGGCTGTCAAGTGTACAAA+CGG - chr2_4:56567986-56568005 None:intergenic 50.0%
!! GCTCAAAGCTTTGGCTTGAG+TGG + chr2_4:56569514-56569533 Msa0336970:intron 50.0%
!! ACCTCATTATCGGTTCTCCC+CGG - chr2_4:56570822-56570841 None:intergenic 50.0%
CCCCCATAATCACCCTACAA+TGG + chr2_4:56571154-56571173 Msa0336970:CDS 50.0%
GGTGTGTGCCTGTGTAGTGT+GGG - chr2_4:56566985-56567004 None:intergenic 55.0%
TGGTGTGTGCCTGTGTAGTG+TGG - chr2_4:56566986-56567005 None:intergenic 55.0%
GTCACAAGGGGTTCTCACCA+TGG - chr2_4:56567062-56567081 None:intergenic 55.0%
AGAAACCAAGGAGGGAGGGA+GGG - chr2_4:56569101-56569120 None:intergenic 55.0%
ACCGGGGAGAACCGATAATG+AGG + chr2_4:56570818-56570837 Msa0336970:CDS 55.0%
GAGAAACCAAGGAGGGAGGG+AGG - chr2_4:56569102-56569121 None:intergenic 60.0%
TCTCTCCCTCCCTCCCTCCT+TGG + chr2_4:56569093-56569112 Msa0336970:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 56566926 56572074 56566926 ID=Msa0336970;Name=Msa0336970
chr2_4 mRNA 56566926 56572074 56566926 ID=Msa0336970-mRNA-1;Parent=Msa0336970;Name=Msa0336970-mRNA-1;_AED=0.26;_eAED=0.26;_QI=376|1|1|1|0.33|0.75|4|74|432
chr2_4 exon 56566926 56567190 56566926 ID=Msa0336970-mRNA-1:exon:17260;Parent=Msa0336970-mRNA-1
chr2_4 exon 56567369 56567441 56567369 ID=Msa0336970-mRNA-1:exon:17261;Parent=Msa0336970-mRNA-1
chr2_4 exon 56567525 56567654 56567525 ID=Msa0336970-mRNA-1:exon:17262;Parent=Msa0336970-mRNA-1
chr2_4 exon 56570794 56572074 56570794 ID=Msa0336970-mRNA-1:exon:17263;Parent=Msa0336970-mRNA-1
chr2_4 five_prime_UTR 56566926 56567190 56566926 ID=Msa0336970-mRNA-1:five_prime_utr;Parent=Msa0336970-mRNA-1
chr2_4 five_prime_UTR 56567369 56567441 56567369 ID=Msa0336970-mRNA-1:five_prime_utr;Parent=Msa0336970-mRNA-1
chr2_4 five_prime_UTR 56567525 56567562 56567525 ID=Msa0336970-mRNA-1:five_prime_utr;Parent=Msa0336970-mRNA-1
chr2_4 CDS 56567563 56567654 56567563 ID=Msa0336970-mRNA-1:cds;Parent=Msa0336970-mRNA-1
chr2_4 CDS 56570794 56572000 56570794 ID=Msa0336970-mRNA-1:cds;Parent=Msa0336970-mRNA-1
chr2_4 three_prime_UTR 56572001 56572074 56572001 ID=Msa0336970-mRNA-1:three_prime_utr;Parent=Msa0336970-mRNA-1
Gene Sequence

>Msa0336970

ATGAACTATCTGAGGCCAAATATCAAAAGAGGGAACTTTAATCAACAAGAGGAAGATATTATCATCAAACTTCATGAAAAACTGGGTAATAGATGGACCGTGATTGCTTCAAATTTACCGGGGAGAACCGATAATGAGGTAAAGAATCACTGGCACACTACCTTGAAGAAGCGTTTTATAAAGAATATTAAGTCTAAGCATGGAAGGAGAAAAGCCAAAGATTCAAATTCAAATAATCACCCTACATTGGAAGAAGCCAAGAAATTTGAAGCAGTTTTAGAGAACAACAATGATCCTAATATTGAAAATCAAATATCTTCACAACCAGCTTCAAGCGATTTGTCTTGCATAACAATGGACACTGCAATTTTTGATGATAGTGACCTTTCTTTTATGGAAACATACATGGACAATTTTTGGACAGAGCCATATATGGTAGACAATTCATATGTCCCCCATAATCACCCTACAATGGAAGAAACCAAGAAACTTGACGGAGTTTTTGAGAACAACATCGATGCCAATATTACAAGTTCACTATCTTCGCAACCATCTTCAAGTGGATTCTCTTGCATAACAACAGAAAATTTAGCTTCCACTATATCACATGAAAATTCAGTTTTTGATGGCAATGACCTTCCTTTTATGGATGCATTCATGGAAACTGTGAGTGAGAATTTCTGGACTGAGCCTTATATGATAGACACTTCCTATGATCACCCTACATTGGAAGAAGCTAATAAACTTGAAGGAGTTTTAGAGAACAATGATCCTAATATTGCAAGTCTATTGTCTTCACAACCATCTTCAAGTGCATTCTCTTGCATAACAATGGATACTCCTTCTGCCACAATATCATATGAAAATCCAATTCGTGATGGCAATGACCTTCATTTTATGGATGCATTCATAGAGGATTTGAGTGAGAATTTCTGGTCAGAGCCATGTATGATAGACAGTTCACATGTCCTTCATAATCACCTTACATTGGAAGAAGCCAAGAAAATTGAAGGAGTTTTTGAGAATAACATTGATCCCAATATTGGTAGTCCACTATCTTCACAACCATCTTCAAATGGATTTTCTTTTATAACAATGGAAAATGTTACTTCCATACTATCACATGAAAATTTTGTTCTTGATGAAAATGACCTTCCTTTAATGAATGCATTATTCCAAAATGACTGGATAAACAATTTTTATGTCCCTCCAAATGAAGAAGCTACACTATTCCCTGCAGAGTGTGAACATGAATACTTTAGTTCTGTGTACGATGTAGGTAGCCATATTCTCGAATAA
Protein sequence

>Msa0336970

MNYLRPNIKRGNFNQQEEDIIIKLHEKLGNRWTVIASNLPGRTDNEVKNHWHTTLKKRFIKNIKSKHGRRKAKDSNSNNHPTLEEAKKFEAVLENNNDPNIENQISSQPASSDLSCITMDTAIFDDSDLSFMETYMDNFWTEPYMVDNSYVPHNHPTMEETKKLDGVFENNIDANITSSLSSQPSSSGFSCITTENLASTISHENSVFDGNDLPFMDAFMETVSENFWTEPYMIDTSYDHPTLEEANKLEGVLENNDPNIASLLSSQPSSSAFSCITMDTPSATISYENPIRDGNDLHFMDAFIEDLSENFWSEPCMIDSSHVLHNHLTLEEAKKIEGVFENNIDPNIGSPLSSQPSSNGFSFITMENVTSILSHENFVLDENDLPLMNALFQNDWINNFYVPPNEEATLFPAECEHEYFSSVYDVGSHILE*