Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341310 | AES78040.1 | 62.573 | 171 | 41 | 5 | 5 | 160 | 1 | 163 | 8.74e-57 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341310 | sp|O81788|WOX13_ARATH | 50.667 | 150 | 47 | 3 | 16 | 138 | 35 | 184 | 9.99e-37 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0341310 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0304910 | Msa0341310 | 0.988278 | 2.146639e-173 | -8.615850e-47 |
| Msa0341300 | Msa0341310 | 0.835918 | 1.268210e-56 | -8.615850e-47 |
| Msa0341310 | Msa1417520 | 0.982066 | 3.812321e-154 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341310 | MtrunA17_Chr7g0222981 | 62.573 | 171 | 41 | 5 | 5 | 160 | 1 | 163 | 8.04e-61 | 188 |
| Msa0341310 | MtrunA17_Chr1g0212511 | 53.529 | 170 | 50 | 4 | 16 | 160 | 22 | 187 | 9.06e-50 | 162 |
| Msa0341310 | MtrunA17_Chr3g0144021 | 43.976 | 166 | 64 | 4 | 18 | 155 | 19 | 183 | 9.77e-39 | 132 |
| Msa0341310 | MtrunA17_Chr8g0392991 | 34.694 | 147 | 81 | 6 | 58 | 200 | 96 | 231 | 8.65e-16 | 74.7 |
| Msa0341310 | MtrunA17_Chr4g0043891 | 29.167 | 144 | 97 | 3 | 58 | 201 | 8 | 146 | 1.47e-13 | 67.4 |
| Msa0341310 | MtrunA17_Chr2g0283141 | 41.935 | 62 | 36 | 0 | 58 | 119 | 55 | 116 | 9.13e-12 | 63.2 |
| Msa0341310 | MtrunA17_Chr7g0223471 | 36.145 | 83 | 52 | 1 | 37 | 119 | 27 | 108 | 5.16e-11 | 61.2 |
| Msa0341310 | MtrunA17_Chr7g0238431 | 37.879 | 66 | 41 | 0 | 58 | 123 | 8 | 73 | 6.16e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341310 | AT4G35550.1 | 50.667 | 150 | 47 | 3 | 16 | 138 | 35 | 184 | 1.02e-37 | 132 |
| Msa0341310 | AT1G20700.1 | 42.029 | 138 | 55 | 1 | 5 | 117 | 17 | 154 | 9.39e-34 | 120 |
| Msa0341310 | AT1G20700.3 | 42.029 | 138 | 55 | 1 | 5 | 117 | 17 | 154 | 1.00e-33 | 119 |
| Msa0341310 | AT1G20700.2 | 45.349 | 86 | 47 | 0 | 32 | 117 | 7 | 92 | 2.32e-25 | 96.7 |
| Msa0341310 | AT1G20710.1 | 42.537 | 134 | 52 | 1 | 18 | 126 | 14 | 147 | 9.78e-25 | 96.3 |
| Msa0341310 | AT5G45980.1 | 42.424 | 66 | 38 | 0 | 54 | 119 | 51 | 116 | 6.67e-13 | 66.6 |
| Msa0341310 | AT3G18010.1 | 31.731 | 104 | 67 | 1 | 28 | 127 | 42 | 145 | 1.77e-12 | 65.5 |
| Msa0341310 | AT2G33880.1 | 41.935 | 62 | 36 | 0 | 58 | 119 | 55 | 116 | 1.34e-11 | 63.2 |
| Msa0341310 | AT2G33880.2 | 41.935 | 62 | 36 | 0 | 58 | 119 | 55 | 116 | 1.39e-11 | 63.2 |
| Msa0341310 | AT2G28610.1 | 38.462 | 65 | 40 | 0 | 58 | 122 | 8 | 72 | 4.36e-11 | 60.8 |
| Msa0341310 | AT2G01500.1 | 43.636 | 55 | 31 | 0 | 58 | 112 | 61 | 115 | 5.52e-11 | 60.8 |
Find 29 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACTTACTAGTGCGATTT+TGG | 0.170160 | 2_4:+62788361 | None:intergenic |
| CTGAGACCAATGTATATAAT+TGG | 0.221984 | 2_4:-62787988 | Msa0341310:CDS |
| TGTCACCAACATTGATTATC+AGG | 0.343112 | 2_4:+62782270 | None:intergenic |
| ACCTGTACAACTTCAAACTA+TGG | 0.358508 | 2_4:-62788098 | Msa0341310:CDS |
| TCCAAGCAAGGAAAAGATAA+AGG | 0.385115 | 2_4:-62788047 | Msa0341310:CDS |
| CTCAGAAATTTGTCCGTGCT+TGG | 0.426170 | 2_4:+62788006 | None:intergenic |
| TAAAAGCTTGTGTGGTTGGC+TGG | 0.444898 | 2_4:-62782403 | Msa0341310:CDS |
| TTGGACTAGATATGAATTCA+AGG | 0.448892 | 2_4:-62788138 | Msa0341310:intron |
| TCCATAGTTTGAAGTTGTAC+AGG | 0.451456 | 2_4:+62788097 | None:intergenic |
| GTTGACACTGAAGGAGCAAT+TGG | 0.457740 | 2_4:-62782328 | Msa0341310:CDS |
| GAAAGGCATGGAGATCTTGA+TGG | 0.460857 | 2_4:-62788508 | None:intergenic |
| TATGAATTCAAGGCATCGTT+GGG | 0.483810 | 2_4:-62788128 | Msa0341310:CDS |
| CAAGAGAAAGCATCGGAGTA+GGG | 0.507277 | 2_4:-62787942 | Msa0341310:CDS |
| ACAAGAGAAAGCATCGGAGT+AGG | 0.511487 | 2_4:-62787943 | Msa0341310:CDS |
| ACACTAAAAGCTTGTGTGGT+TGG | 0.543812 | 2_4:-62782407 | Msa0341310:CDS |
| GCAAATATTTGAAGATGAGA+CGG | 0.560708 | 2_4:-62788074 | Msa0341310:CDS |
| CTGAAACCAATTATATACAT+TGG | 0.563327 | 2_4:+62787982 | None:intergenic |
| GGTTTCAGAACAGACGTGCT+AGG | 0.577434 | 2_4:-62787967 | Msa0341310:CDS |
| GTTGTTGATTTAGCCAAGCA+CGG | 0.577536 | 2_4:-62788019 | Msa0341310:CDS |
| ATATGAATTCAAGGCATCGT+TGG | 0.578747 | 2_4:-62788129 | Msa0341310:CDS |
| GAATCAAGAGTTGACACTGA+AGG | 0.584888 | 2_4:-62782337 | Msa0341310:CDS |
| GTTTGAAGTTGTACAGGTGT+TGG | 0.595078 | 2_4:+62788103 | None:intergenic |
| GGTTAATGTTGAATCAGAAG+TGG | 0.597468 | 2_4:-62787921 | Msa0341310:CDS |
| AGCTACCTGATAATCAATGT+TGG | 0.644611 | 2_4:-62782275 | Msa0341310:CDS |
| TGAGACGGAGTCTCCAAGCA+AGG | 0.651947 | 2_4:-62788059 | Msa0341310:CDS |
| CTTATCATCAGAATCAACCT+CGG | 0.655992 | 2_4:+62787895 | None:intergenic |
| CTAGGTACAAGAGAAAGCAT+CGG | 0.670064 | 2_4:-62787949 | Msa0341310:CDS |
| ATGCACACTAAAAGCTTGTG+TGG | 0.681176 | 2_4:-62782411 | Msa0341310:CDS |
| TGAATCAGAAGTGGAGACCG+AGG | 0.711591 | 2_4:-62787912 | Msa0341310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAAAAAAAAAAAGTTAA+GGG | - | chr2_4:62782497-62782516 | Msa0341310:intron | 10.0% |
| !!! | CAATTTTTTTTTTTTTTTGA+GGG | - | chr2_4:62783063-62783082 | Msa0341310:intron | 10.0% |
| !!! | AATTTTTTTTTTTTTTTGAG+GGG | - | chr2_4:62783064-62783083 | Msa0341310:intron | 10.0% |
| !!! | TAAAATTTTATAATAAAGAG+AGG | + | chr2_4:62784055-62784074 | None:intergenic | 10.0% |
| !! | ATAAATTTCTTAAATTCAAA+CGG | + | chr2_4:62784895-62784914 | None:intergenic | 10.0% |
| !!! | TTCAAATATTTTTAGAATTT+AGG | + | chr2_4:62785609-62785628 | None:intergenic | 10.0% |
| !! | ATAATTATGTAAAATGAAAA+TGG | + | chr2_4:62786057-62786076 | None:intergenic | 10.0% |
| !!! | TGATTTTTTTTTTTTTTTGA+GGG | - | chr2_4:62786210-62786229 | Msa0341310:intron | 10.0% |
| !!! | TATTTTTGTTTTTTTTTTGA+AGG | + | chr2_4:62786301-62786320 | None:intergenic | 10.0% |
| !!! | TTCTTTTTCAATATTTATTT+TGG | + | chr2_4:62788230-62788249 | None:intergenic | 10.0% |
| !! | CTTCAAAAAAAAAAAAGTTA+AGG | - | chr2_4:62782496-62782515 | Msa0341310:intron | 15.0% |
| !!! | GCAATTTTTTTTTTTTTTTG+AGG | - | chr2_4:62783062-62783081 | Msa0341310:intron | 15.0% |
| !!! | TCTTGTGATTTAATTTAATT+TGG | - | chr2_4:62783561-62783580 | Msa0341310:intron | 15.0% |
| !! | TGTCAATTAAAAAATATTCA+TGG | - | chr2_4:62783618-62783637 | Msa0341310:intron | 15.0% |
| !! | TTATTTATACTTCATTGTAT+TGG | - | chr2_4:62783932-62783951 | Msa0341310:intron | 15.0% |
| !!! | CAAAGAAAAATTCTTTTATT+AGG | + | chr2_4:62783988-62784007 | None:intergenic | 15.0% |
| !!! | TTGTATGTTTTAGATTTTTT+TGG | + | chr2_4:62784859-62784878 | None:intergenic | 15.0% |
| !! | TTAGTTAAATACAAATAGAA+AGG | + | chr2_4:62786030-62786049 | None:intergenic | 15.0% |
| !!! | AACTTATCTAAAATCATAAA+TGG | - | chr2_4:62786080-62786099 | Msa0341310:intron | 15.0% |
| !!! | GTGATTTTTTTTTTTTTTTG+AGG | - | chr2_4:62786209-62786228 | Msa0341310:intron | 15.0% |
| !! | TAGTAAAACAACATTTAAAA+AGG | + | chr2_4:62786998-62787017 | None:intergenic | 15.0% |
| !! | ATAAAAAAAAAGTTGCTTAT+AGG | - | chr2_4:62787096-62787115 | Msa0341310:intron | 15.0% |
| !! | GAAAACAAAAACATATATAA+TGG | - | chr2_4:62787193-62787212 | Msa0341310:intron | 15.0% |
| !! | AATAAAACAAAAACAAAAGT+AGG | - | chr2_4:62787254-62787273 | Msa0341310:intron | 15.0% |
| !! | AAAATTGGAAATTGTAAAAA+GGG | - | chr2_4:62787530-62787549 | Msa0341310:intron | 15.0% |
| !!! | GTATTTAATTATTTCAGTTT+TGG | + | chr2_4:62788208-62788227 | None:intergenic | 15.0% |
| !! | AACTGAATAAAATAACAATC+TGG | + | chr2_4:62782580-62782599 | None:intergenic | 20.0% |
| !! | TATAAACTACATTCTTTAGT+TGG | + | chr2_4:62782953-62782972 | None:intergenic | 20.0% |
| !! | AAAAACATAGAAACATGTAA+CGG | + | chr2_4:62782988-62783007 | None:intergenic | 20.0% |
| !!! | ATTAGTATTTTACGAATGTA+GGG | - | chr2_4:62783035-62783054 | Msa0341310:intron | 20.0% |
| !! | TCTTTGACTAAATTAACTAA+TGG | - | chr2_4:62783284-62783303 | Msa0341310:intron | 20.0% |
| !! | TAAAAAATTCTTGCAATACA+TGG | + | chr2_4:62783777-62783796 | None:intergenic | 20.0% |
| !!! | AAAATTCTTTTATTAGGTGA+CGG | + | chr2_4:62783982-62784001 | None:intergenic | 20.0% |
| !!! | ATATTTTGTCACATCATATA+AGG | + | chr2_4:62784741-62784760 | None:intergenic | 20.0% |
| !! | AAGGAATTATGAAGAAAATT+TGG | + | chr2_4:62784835-62784854 | None:intergenic | 20.0% |
| !! | AAATTTATACCTATTAAGCA+AGG | - | chr2_4:62784907-62784926 | Msa0341310:intron | 20.0% |
| !! | AATTTATACCTATTAAGCAA+GGG | - | chr2_4:62784908-62784927 | Msa0341310:intron | 20.0% |
| !! | AAACAATTAAGTCATTCAAA+TGG | + | chr2_4:62785146-62785165 | None:intergenic | 20.0% |
| !!! | GTTTTTTCAAACTCAATTAT+TGG | + | chr2_4:62785257-62785276 | None:intergenic | 20.0% |
| !!! | TTTAGGAATTTCTGAAATTA+GGG | + | chr2_4:62785592-62785611 | None:intergenic | 20.0% |
| !!! | ATTTAGGAATTTCTGAAATT+AGG | + | chr2_4:62785593-62785612 | None:intergenic | 20.0% |
| !! | ATACAAATAGAAAGGTAATT+TGG | + | chr2_4:62786022-62786041 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGAGGGATTT+TGG | - | chr2_4:62786217-62786236 | Msa0341310:intron | 20.0% |
| !! | TTAACATCTATGAAGAAAAA+TGG | - | chr2_4:62786502-62786521 | Msa0341310:intron | 20.0% |
| !! | TAAATTGGAGAATAAGATAA+GGG | - | chr2_4:62786551-62786570 | Msa0341310:intron | 20.0% |
| !!! | CTTATTTGAGATTTAAACTT+TGG | - | chr2_4:62786798-62786817 | Msa0341310:intron | 20.0% |
| !!! | CTTATTTGAGATTTAAACTT+TGG | - | chr2_4:62786798-62786817 | Msa0341310:intron | 20.0% |
| !! | TTACCCTTAATTAATTATTG+CGG | - | chr2_4:62787021-62787040 | Msa0341310:intron | 20.0% |
| !! | AACAAAAACATATATAATGG+TGG | - | chr2_4:62787196-62787215 | Msa0341310:intron | 20.0% |
| !!! | TTTTCTATTCTTTTTCACTT+GGG | + | chr2_4:62787479-62787498 | None:intergenic | 20.0% |
| !!! | TTTTTCTATTCTTTTTCACT+TGG | + | chr2_4:62787480-62787499 | None:intergenic | 20.0% |
| !! | GAAAATTGGAAATTGTAAAA+AGG | - | chr2_4:62787529-62787548 | Msa0341310:intron | 20.0% |
| !!! | CATTCTAAGTTATTTTGTAT+TGG | + | chr2_4:62787687-62787706 | None:intergenic | 20.0% |
| !! | CAATACAAAATAACTTAGAA+TGG | - | chr2_4:62787685-62787704 | Msa0341310:intron | 20.0% |
| !! | TTTATATTGAATACCATAGT+TGG | + | chr2_4:62788143-62788162 | None:intergenic | 20.0% |
| !! | AACCTTATAATATAACCAAA+AGG | - | chr2_4:62788287-62788306 | Msa0341310:intron | 20.0% |
| !! | AGGAATTGAAATTCATTATT+TGG | + | chr2_4:62788328-62788347 | None:intergenic | 20.0% |
| !!! | CATAAACTGCAATTTGTTTT+CGG | + | chr2_4:62782355-62782374 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTATGCATTTGA+AGG | + | chr2_4:62782397-62782416 | None:intergenic | 25.0% |
| ! | CATGATGATCACATTTAATT+AGG | - | chr2_4:62782547-62782566 | Msa0341310:intron | 25.0% |
| !! | AAGAAAGTGTAACTGAATTT+AGG | + | chr2_4:62782611-62782630 | None:intergenic | 25.0% |
| !! | CAGTTACACTTTCTTTTTAT+TGG | - | chr2_4:62782616-62782635 | Msa0341310:intron | 25.0% |
| ! | CTGAAACCAATTATATACAT+TGG | + | chr2_4:62782794-62782813 | None:intergenic | 25.0% |
| !! | GATTAGTATTTTACGAATGT+AGG | - | chr2_4:62783034-62783053 | Msa0341310:intron | 25.0% |
| ! | TTAAAGAAAGACACATTTAG+AGG | - | chr2_4:62783365-62783384 | Msa0341310:intron | 25.0% |
| !!! | TGCAAGAATTTTTTAGCATT+TGG | - | chr2_4:62783782-62783801 | Msa0341310:intron | 25.0% |
| !!! | GCAAGAATTTTTTAGCATTT+GGG | - | chr2_4:62783783-62783802 | Msa0341310:intron | 25.0% |
| ! | ATTAGCTACAAGTACAAAAT+TGG | - | chr2_4:62784232-62784251 | Msa0341310:intron | 25.0% |
| ! | ATTGAAGTAGTTCAAATAAG+TGG | - | chr2_4:62784438-62784457 | Msa0341310:intron | 25.0% |
| !! | TCGTGAAAATTGTCTAAAAT+TGG | - | chr2_4:62784543-62784562 | Msa0341310:intron | 25.0% |
| ! | TAATTTCTGCATTATGGTTA+TGG | + | chr2_4:62784668-62784687 | None:intergenic | 25.0% |
| ! | GCTAATTAATTTCTGCATTA+TGG | + | chr2_4:62784674-62784693 | None:intergenic | 25.0% |
| !!! | TGTTTTAGATTTTTTTGGCA+AGG | + | chr2_4:62784854-62784873 | None:intergenic | 25.0% |
| ! | ATTTATACCTATTAAGCAAG+GGG | - | chr2_4:62784909-62784928 | Msa0341310:intron | 25.0% |
| ! | GGAATCAATTAAATAGATGA+TGG | + | chr2_4:62785035-62785054 | None:intergenic | 25.0% |
| ! | TGAATTATCAACATAGAAGA+TGG | + | chr2_4:62785059-62785078 | None:intergenic | 25.0% |
| ! | AATTGTTTCATCGTATAGAA+AGG | - | chr2_4:62785158-62785177 | Msa0341310:intron | 25.0% |
| ! | TAACATTGGATATACACTAT+TGG | + | chr2_4:62785356-62785375 | None:intergenic | 25.0% |
| ! | CACATCATAAAAAATGATGA+CGG | + | chr2_4:62785532-62785551 | None:intergenic | 25.0% |
| !!! | CATTAAGTCGATTTAACTTT+TGG | - | chr2_4:62786182-62786201 | Msa0341310:intron | 25.0% |
| ! | GCCCATAATATAAAAGTTAA+CGG | - | chr2_4:62786332-62786351 | Msa0341310:intron | 25.0% |
| !! | CCCGTTAACTTTTATATTAT+GGG | + | chr2_4:62786336-62786355 | None:intergenic | 25.0% |
| ! | CCCATAATATAAAAGTTAAC+GGG | - | chr2_4:62786333-62786352 | Msa0341310:intron | 25.0% |
| !! | ACCCGTTAACTTTTATATTA+TGG | + | chr2_4:62786337-62786356 | None:intergenic | 25.0% |
| ! | GTAAATTGGAGAATAAGATA+AGG | - | chr2_4:62786550-62786569 | Msa0341310:intron | 25.0% |
| ! | TTCACCAAAAATTAAAATCC+TGG | - | chr2_4:62786593-62786612 | Msa0341310:intron | 25.0% |
| !!! | GATTCCAGGATTTTAATTTT+TGG | + | chr2_4:62786600-62786619 | None:intergenic | 25.0% |
| ! | TACTATTCAAATTGTACCAA+TGG | + | chr2_4:62786899-62786918 | None:intergenic | 25.0% |
| ! | TCTCCGCAATAATTAATTAA+GGG | + | chr2_4:62787027-62787046 | None:intergenic | 25.0% |
| ! | TTCTCCGCAATAATTAATTA+AGG | + | chr2_4:62787028-62787047 | None:intergenic | 25.0% |
| ! | AAAAAAAAGTTGCTTATAGG+AGG | - | chr2_4:62787099-62787118 | Msa0341310:intron | 25.0% |
| !!! | TTTTTGTTTTCCTCAAAAGT+GGG | + | chr2_4:62787184-62787203 | None:intergenic | 25.0% |
| ! | GAATAGAAAAAAAAAACTCG+AGG | - | chr2_4:62787489-62787508 | Msa0341310:intron | 25.0% |
| ! | TAATGTGAGAACATGAAAAT+TGG | - | chr2_4:62787515-62787534 | Msa0341310:intron | 25.0% |
| ! | AAGAGTTGAGATATGAAAAT+TGG | - | chr2_4:62787569-62787588 | Msa0341310:intron | 25.0% |
| ! | AGAGTTGAGATATGAAAATT+GGG | - | chr2_4:62787570-62787589 | Msa0341310:intron | 25.0% |
| ! | GATGATTATATAAGCTTACA+TGG | + | chr2_4:62787628-62787647 | None:intergenic | 25.0% |
| !! | CTGACACAATTATATGATTT+TGG | + | chr2_4:62788051-62788070 | None:intergenic | 25.0% |
| !!! | TGCCTTTTGGTTATATTATA+AGG | + | chr2_4:62788292-62788311 | None:intergenic | 25.0% |
| ! | TAAACTTACTAGTGCGATTT+TGG | + | chr2_4:62782415-62782434 | None:intergenic | 30.0% |
| AAAATCGCACTAGTAAGTTT+AGG | - | chr2_4:62782414-62782433 | Msa0341310:CDS | 30.0% | |
| AAATCGCACTAGTAAGTTTA+GGG | - | chr2_4:62782415-62782434 | Msa0341310:CDS | 30.0% | |
| ! | TTGGACTAGATATGAATTCA+AGG | - | chr2_4:62782635-62782654 | Msa0341310:intron | 30.0% |
| GCAAATATTTGAAGATGAGA+CGG | - | chr2_4:62782699-62782718 | Msa0341310:intron | 30.0% | |
| CTGAGACCAATGTATATAAT+TGG | - | chr2_4:62782785-62782804 | Msa0341310:intron | 30.0% | |
| ATAATGAAGCTTACCTTAGA+GGG | + | chr2_4:62783119-62783138 | None:intergenic | 30.0% | |
| AAAGACTATTGACACATTCT+AGG | - | chr2_4:62783415-62783434 | Msa0341310:intron | 30.0% | |
| ! | ATTTGTTTCCTCTCTTCTTT+TGG | - | chr2_4:62783897-62783916 | Msa0341310:intron | 30.0% |
| ! | TTATGGTTATGGAAGTATAC+TGG | + | chr2_4:62784657-62784676 | None:intergenic | 30.0% |
| ! | ATTTGGAGTCACATCATATA+CGG | + | chr2_4:62784818-62784837 | None:intergenic | 30.0% |
| TAACTCGAAATCTAAAAGTC+CGG | - | chr2_4:62784947-62784966 | Msa0341310:intron | 30.0% | |
| GTATACAATGTTAGATATGC+AGG | + | chr2_4:62785009-62785028 | None:intergenic | 30.0% | |
| ATTATCAACATAGAAGATGG+AGG | + | chr2_4:62785056-62785075 | None:intergenic | 30.0% | |
| AAAACCTTTCTTGAAGTACA+CGG | + | chr2_4:62785117-62785136 | None:intergenic | 30.0% | |
| CTAATGTACATCCATATTTG+GGG | + | chr2_4:62785187-62785206 | None:intergenic | 30.0% | |
| GCTAATGTACATCCATATTT+GGG | + | chr2_4:62785188-62785207 | None:intergenic | 30.0% | |
| TGCTAATGTACATCCATATT+TGG | + | chr2_4:62785189-62785208 | None:intergenic | 30.0% | |
| TGATATGCTAGGTAAAATGA+TGG | - | chr2_4:62785226-62785245 | Msa0341310:intron | 30.0% | |
| TTGAGTTTGAAAAAACTCTG+AGG | - | chr2_4:62785261-62785280 | Msa0341310:intron | 30.0% | |
| !!! | GATTTTGAAATTGGTGCAAA+AGG | + | chr2_4:62785419-62785438 | None:intergenic | 30.0% |
| !!! | AATGGAGAGGATTTTGAAAT+TGG | + | chr2_4:62785428-62785447 | None:intergenic | 30.0% |
| !! | CACTAAGAGTATTGTTCAAT+AGG | + | chr2_4:62785816-62785835 | None:intergenic | 30.0% |
| ! | GATTTTGCTTAAAAGTGAGT+TGG | - | chr2_4:62785894-62785913 | Msa0341310:intron | 30.0% |
| GGATGTGAATTGATTATGTT+TGG | - | chr2_4:62785915-62785934 | Msa0341310:intron | 30.0% | |
| !! | TCTTATGAGTTGATGTTGTT+TGG | - | chr2_4:62785959-62785978 | Msa0341310:intron | 30.0% |
| !! | AGTCGATTTAACTTTTGGAA+CGG | - | chr2_4:62786187-62786206 | Msa0341310:intron | 30.0% |
| !!! | TTTTTTGAGGGATTTTGGAA+CGG | - | chr2_4:62786222-62786241 | Msa0341310:intron | 30.0% |
| GAAAAAGACGTGTAGTAAAT+TGG | - | chr2_4:62786536-62786555 | Msa0341310:intron | 30.0% | |
| GTTTCTTTCAAGCTACAAAT+TGG | + | chr2_4:62786646-62786665 | None:intergenic | 30.0% | |
| AAAATCAATTCCCTAAAACG+TGG | + | chr2_4:62786687-62786706 | None:intergenic | 30.0% | |
| GACACTTAATAAGTAACTGA+GGG | + | chr2_4:62786924-62786943 | None:intergenic | 30.0% | |
| AGACACTTAATAAGTAACTG+AGG | + | chr2_4:62786925-62786944 | None:intergenic | 30.0% | |
| !! | GGAGGAAGTATATTTTTGTT+TGG | - | chr2_4:62787117-62787136 | Msa0341310:intron | 30.0% |
| !!! | GTTTTTGTTTTCCTCAAAAG+TGG | + | chr2_4:62787185-62787204 | None:intergenic | 30.0% |
| GACTTAAGTCTGATATGTAA+GGG | + | chr2_4:62787425-62787444 | None:intergenic | 30.0% | |
| AGACTTAAGTCTGATATGTA+AGG | + | chr2_4:62787426-62787445 | None:intergenic | 30.0% | |
| ATGAAAATTGGGAAAACATG+AGG | - | chr2_4:62787581-62787600 | Msa0341310:intron | 30.0% | |
| TATATAAGCTTACATGGAAG+TGG | + | chr2_4:62787622-62787641 | None:intergenic | 30.0% | |
| !! | AGAATGTTAATTTGCCAACA+TGG | - | chr2_4:62787780-62787799 | Msa0341310:intron | 30.0% |
| ! | ATTCTCTCTGGTGTCAATTT+AGG | - | chr2_4:62782457-62782476 | Msa0341310:intron | 35.0% |
| !! | ATATGAATTCAAGGCATCGT+TGG | - | chr2_4:62782644-62782663 | Msa0341310:intron | 35.0% |
| !! | TATGAATTCAAGGCATCGTT+GGG | - | chr2_4:62782645-62782664 | Msa0341310:intron | 35.0% |
| ACCTGTACAACTTCAAACTA+TGG | - | chr2_4:62782675-62782694 | Msa0341310:intron | 35.0% | |
| ! | TCCATAGTTTGAAGTTGTAC+AGG | + | chr2_4:62782679-62782698 | None:intergenic | 35.0% |
| TCCAAGCAAGGAAAAGATAA+AGG | - | chr2_4:62782726-62782745 | Msa0341310:intron | 35.0% | |
| ! | TCCTTTATCTTTTCCTTGCT+TGG | + | chr2_4:62782730-62782749 | None:intergenic | 35.0% |
| GGTTAATGTTGAATCAGAAG+TGG | - | chr2_4:62782852-62782871 | Msa0341310:intron | 35.0% | |
| CTTATCATCAGAATCAACCT+CGG | + | chr2_4:62782881-62782900 | None:intergenic | 35.0% | |
| ! | TAGAAACATGTAACGGAAGA+AGG | + | chr2_4:62782981-62783000 | None:intergenic | 35.0% |
| !!! | TTTTTTGAGGGGTTGAATGA+AGG | - | chr2_4:62783075-62783094 | Msa0341310:intron | 35.0% |
| !! | TTTTTGAGGGGTTGAATGAA+GGG | - | chr2_4:62783076-62783095 | Msa0341310:intron | 35.0% |
| CATAATGAAGCTTACCTTAG+AGG | + | chr2_4:62783120-62783139 | None:intergenic | 35.0% | |
| ! | TTTGAAGTCAACTTTGAGCA+AGG | + | chr2_4:62783143-62783162 | None:intergenic | 35.0% |
| GACATTGTCTAACACATCAA+GGG | + | chr2_4:62783199-62783218 | None:intergenic | 35.0% | |
| TGACATTGTCTAACACATCA+AGG | + | chr2_4:62783200-62783219 | None:intergenic | 35.0% | |
| ACTAATGGAAGAGACATTCT+AGG | - | chr2_4:62783299-62783318 | Msa0341310:intron | 35.0% | |
| GGATCAAGCTAACTAACAAA+AGG | - | chr2_4:62783320-62783339 | Msa0341310:intron | 35.0% | |
| CACTGTGTTTGTATTATGAG+TGG | - | chr2_4:62783807-62783826 | Msa0341310:intron | 35.0% | |
| !! | ACCACATATTACTTTTCGCA+GGG | - | chr2_4:62784094-62784113 | Msa0341310:intron | 35.0% |
| AACACAGAAGGTTGACATTT+GGG | - | chr2_4:62784190-62784209 | Msa0341310:intron | 35.0% | |
| !!! | CAAAATTGGTAGCGTGTTTT+TGG | - | chr2_4:62784246-62784265 | Msa0341310:intron | 35.0% |
| CATGACTACATTATGTGATG+CGG | - | chr2_4:62784344-62784363 | Msa0341310:intron | 35.0% | |
| ATGACTACATTATGTGATGC+GGG | - | chr2_4:62784345-62784364 | Msa0341310:intron | 35.0% | |
| GTGTATAATAGCCATACTAC+AGG | - | chr2_4:62784705-62784724 | Msa0341310:intron | 35.0% | |
| GTGCAATATGTTGATATGCT+AGG | - | chr2_4:62785215-62785234 | Msa0341310:intron | 35.0% | |
| ! | TCCAATGTTAGTTCTTTCTC+CGG | - | chr2_4:62785366-62785385 | Msa0341310:intron | 35.0% |
| TCAAGCACATGAGATTGAAA+TGG | + | chr2_4:62785446-62785465 | None:intergenic | 35.0% | |
| TCTAGAAATTGTTCCATGGT+TGG | + | chr2_4:62785651-62785670 | None:intergenic | 35.0% | |
| CAATACTCTTAGTGTGTGTT+TGG | - | chr2_4:62785822-62785841 | Msa0341310:intron | 35.0% | |
| TTAGTGTGTGTTTGGTATAG+CGG | - | chr2_4:62785830-62785849 | Msa0341310:intron | 35.0% | |
| ! | TAAAAGTTAACGGGTCAAAG+AGG | - | chr2_4:62786342-62786361 | Msa0341310:intron | 35.0% |
| AGGTTGAAGAAACAACAACT+GGG | + | chr2_4:62786383-62786402 | None:intergenic | 35.0% | |
| ! | TAGGTTGAAGAAACAACAAC+TGG | + | chr2_4:62786384-62786403 | None:intergenic | 35.0% |
| ! | TTGAAAGAAACCCACGTTTT+GGG | - | chr2_4:62786655-62786674 | Msa0341310:intron | 35.0% |
| ATCTCAAATAAGTGCCTGTT+TGG | + | chr2_4:62786790-62786809 | None:intergenic | 35.0% | |
| TCTCAAATAAGTGCCTTCTA+CGG | + | chr2_4:62786837-62786856 | None:intergenic | 35.0% | |
| !! | GAAATATGAACCCACTTTTG+AGG | - | chr2_4:62787171-62787190 | Msa0341310:intron | 35.0% |
| ACATATATAATGGTGGTTGC+TGG | - | chr2_4:62787203-62787222 | Msa0341310:intron | 35.0% | |
| AGGAATCTCTTGTGTACTAA+TGG | - | chr2_4:62787274-62787293 | Msa0341310:intron | 35.0% | |
| !!! | GTTTTTAGTTCACTGTGCAT+TGG | - | chr2_4:62787357-62787376 | Msa0341310:intron | 35.0% |
| CTTAGTAAGCATCTCAAACA+AGG | - | chr2_4:62787751-62787770 | Msa0341310:intron | 35.0% | |
| GACATTGATGTTGTTGGATA+GGG | + | chr2_4:62787918-62787937 | None:intergenic | 35.0% | |
| CTATCCAACAACATCAATGT+CGG | - | chr2_4:62787917-62787936 | Msa0341310:CDS | 35.0% | |
| CTTACAATATTGTACAGCAC+TGG | - | chr2_4:62787984-62788003 | Msa0341310:CDS | 35.0% | |
| TCTTGAAATGCAACCAACTA+TGG | - | chr2_4:62788127-62788146 | Msa0341310:CDS | 35.0% | |
| ACCAAAAGGCAATAAAAGCA+AGG | - | chr2_4:62788301-62788320 | Msa0341310:intron | 35.0% | |
| !! | TCCTTGCTTTTATTGCCTTT+TGG | + | chr2_4:62788305-62788324 | None:intergenic | 35.0% |
| AGCTACCTGATAATCAATGT+TGG | - | chr2_4:62788498-62788517 | Msa0341310:CDS | 35.0% | |
| ! | TCTCTGGTGTCAATTTAGGT+GGG | - | chr2_4:62782461-62782480 | Msa0341310:intron | 40.0% |
| ! | GTTTGAAGTTGTACAGGTGT+TGG | + | chr2_4:62782673-62782692 | None:intergenic | 40.0% |
| !! | GTTGTTGATTTAGCCAAGCA+CGG | - | chr2_4:62782754-62782773 | Msa0341310:intron | 40.0% |
| ! | CTAGGTACAAGAGAAAGCAT+CGG | - | chr2_4:62782824-62782843 | Msa0341310:intron | 40.0% |
| GCAAGTTAATAGTCCCTCTA+AGG | - | chr2_4:62783103-62783122 | Msa0341310:intron | 40.0% | |
| ! | ACTAACAAAAGGTATGCTCG+AGG | - | chr2_4:62783331-62783350 | Msa0341310:intron | 40.0% |
| ! | CTAACAAAAGGTATGCTCGA+GGG | - | chr2_4:62783332-62783351 | Msa0341310:intron | 40.0% |
| TAAGCTTGAGCAATACGTCA+GGG | + | chr2_4:62783525-62783544 | None:intergenic | 40.0% | |
| TTAAGCTTGAGCAATACGTC+AGG | + | chr2_4:62783526-62783545 | None:intergenic | 40.0% | |
| TAAATCACAAGACTCCACAC+TGG | + | chr2_4:62783553-62783572 | None:intergenic | 40.0% | |
| ! | TTTTCGCTCTTGCAATTACG+AGG | - | chr2_4:62783865-62783884 | Msa0341310:intron | 40.0% |
| CAACTCAACCAAAAGAAGAG+AGG | + | chr2_4:62783908-62783927 | None:intergenic | 40.0% | |
| !! | CACCACATATTACTTTTCGC+AGG | - | chr2_4:62784093-62784112 | Msa0341310:intron | 40.0% |
| TCCCTGCGAAAAGTAATATG+TGG | + | chr2_4:62784098-62784117 | None:intergenic | 40.0% | |
| GGGAGTAGCAATTATCTTAC+TGG | - | chr2_4:62784114-62784133 | Msa0341310:intron | 40.0% | |
| !! | TGGAAAAATGAAAGCACCTG+AGG | - | chr2_4:62784134-62784153 | Msa0341310:intron | 40.0% |
| CAACACAGAAGGTTGACATT+TGG | - | chr2_4:62784189-62784208 | Msa0341310:intron | 40.0% | |
| ACACAGAAGGTTGACATTTG+GGG | - | chr2_4:62784191-62784210 | Msa0341310:intron | 40.0% | |
| TTGGTTGACAAAGAAGACTC+TGG | - | chr2_4:62784562-62784581 | Msa0341310:intron | 40.0% | |
| ATGGAGAGCTCATTGAGTTT+GGG | + | chr2_4:62784633-62784652 | None:intergenic | 40.0% | |
| ! | GTTATGGAAGTATACTGGCA+TGG | + | chr2_4:62784652-62784671 | None:intergenic | 40.0% |
| ACTTTAGCCCCTTGCTTAAT+AGG | + | chr2_4:62784919-62784938 | None:intergenic | 40.0% | |
| TAAAAGTCCGGTTGCATTTC+AGG | - | chr2_4:62784959-62784978 | Msa0341310:intron | 40.0% | |
| AAAAGTCCGGTTGCATTTCA+GGG | - | chr2_4:62784960-62784979 | Msa0341310:intron | 40.0% | |
| AAAGAACCCTGAAATGCAAC+CGG | + | chr2_4:62784969-62784988 | None:intergenic | 40.0% | |
| TAGAAAGGATGCCCCAAATA+TGG | - | chr2_4:62785173-62785192 | Msa0341310:intron | 40.0% | |
| TGGATGTACATTAGCACGAT+TGG | - | chr2_4:62785193-62785212 | Msa0341310:intron | 40.0% | |
| !! | GAAAAAACTCTGAGGCATTG+AGG | - | chr2_4:62785269-62785288 | Msa0341310:intron | 40.0% |
| AACATGGTGTATGGGGAAAT+TGG | + | chr2_4:62785298-62785317 | None:intergenic | 40.0% | |
| ACAATGGAACATGGTGTATG+GGG | + | chr2_4:62785305-62785324 | None:intergenic | 40.0% | |
| GACAATGGAACATGGTGTAT+GGG | + | chr2_4:62785306-62785325 | None:intergenic | 40.0% | |
| AGACAATGGAACATGGTGTA+TGG | + | chr2_4:62785307-62785326 | None:intergenic | 40.0% | |
| AGCAAGAAGACAATGGAACA+TGG | + | chr2_4:62785314-62785333 | None:intergenic | 40.0% | |
| TGTTCCATTGTCTTCTTGCT+TGG | - | chr2_4:62785314-62785333 | Msa0341310:intron | 40.0% | |
| ACCGGAGAAAGAACTAACAT+TGG | + | chr2_4:62785370-62785389 | None:intergenic | 40.0% | |
| CACATGAGATTGAAATGGAG+AGG | + | chr2_4:62785441-62785460 | None:intergenic | 40.0% | |
| ! | GGCTTCTAGAAATTGTTCCA+TGG | + | chr2_4:62785655-62785674 | None:intergenic | 40.0% |
| TCTCTCCACTTACAACAACT+AGG | - | chr2_4:62785704-62785723 | Msa0341310:intron | 40.0% | |
| TCTGTCCTAGTTGTTGTAAG+TGG | + | chr2_4:62785712-62785731 | None:intergenic | 40.0% | |
| GACAGATGAAAATTCTAGCG+CGG | - | chr2_4:62785726-62785745 | Msa0341310:intron | 40.0% | |
| ACAGATGAAAATTCTAGCGC+GGG | - | chr2_4:62785727-62785746 | Msa0341310:intron | 40.0% | |
| TTATGGGCACGACATGTTTA+AGG | - | chr2_4:62785759-62785778 | Msa0341310:intron | 40.0% | |
| ! | CTTGAAAGAAACCCACGTTT+TGG | - | chr2_4:62786654-62786673 | Msa0341310:intron | 40.0% |
| TCATCCAAACATCCATGAGA+AGG | - | chr2_4:62786711-62786730 | Msa0341310:intron | 40.0% | |
| TCAACCTTCTCATGGATGTT+TGG | + | chr2_4:62786718-62786737 | None:intergenic | 40.0% | |
| CATCCATGAGAAGGTTGAAA+TGG | - | chr2_4:62786720-62786739 | Msa0341310:intron | 40.0% | |
| ATGGCGTTTGAGAGTGAAAA+CGG | - | chr2_4:62786739-62786758 | Msa0341310:intron | 40.0% | |
| TTGCAAACGTATAGCCAAAC+AGG | - | chr2_4:62786773-62786792 | Msa0341310:intron | 40.0% | |
| ! | TTTAGTTCACTGTGCATTGG+AGG | - | chr2_4:62787360-62787379 | Msa0341310:intron | 40.0% |
| CAAAACCTAGTTCGTGGATT+AGG | - | chr2_4:62787448-62787467 | Msa0341310:intron | 40.0% | |
| AGAATCCTAATCCACGAACT+AGG | + | chr2_4:62787456-62787475 | None:intergenic | 40.0% | |
| CCGATATATGTATTGCAGAC+GGG | + | chr2_4:62787831-62787850 | None:intergenic | 40.0% | |
| CCCGTCTGCAATACATATAT+CGG | - | chr2_4:62787828-62787847 | Msa0341310:intron | 40.0% | |
| CCCGATATATGTATTGCAGA+CGG | + | chr2_4:62787832-62787851 | None:intergenic | 40.0% | |
| CCGTCTGCAATACATATATC+GGG | - | chr2_4:62787829-62787848 | Msa0341310:intron | 40.0% | |
| CGACATTGATGTTGTTGGAT+AGG | + | chr2_4:62787919-62787938 | None:intergenic | 40.0% | |
| TGTTCCGACATTGATGTTGT+TGG | + | chr2_4:62787924-62787943 | None:intergenic | 40.0% | |
| AACAACATCAATGTCGGAAC+AGG | - | chr2_4:62787923-62787942 | Msa0341310:CDS | 40.0% | |
| !! | CAATATTGTACAGCACTGGT+TGG | - | chr2_4:62787988-62788007 | Msa0341310:CDS | 40.0% |
| !!! | ACAGCACTGGTTGGTTTTTT+TGG | - | chr2_4:62787997-62788016 | Msa0341310:CDS | 40.0% |
| GTGCATTACTAATGCTGTAC+AGG | + | chr2_4:62788348-62788367 | None:intergenic | 40.0% | |
| ATGCACACTAAAAGCTTGTG+TGG | - | chr2_4:62788362-62788381 | Msa0341310:intron | 40.0% | |
| ACACTAAAAGCTTGTGTGGT+TGG | - | chr2_4:62788366-62788385 | Msa0341310:intron | 40.0% | |
| GAATCAAGAGTTGACACTGA+AGG | - | chr2_4:62788436-62788455 | Msa0341310:CDS | 40.0% | |
| ! | GTTTAGGGTTATAGCGTCTC+AGG | - | chr2_4:62782430-62782449 | Msa0341310:intron | 45.0% |
| ! | CTCTCTGGTGTCAATTTAGG+TGG | - | chr2_4:62782460-62782479 | Msa0341310:intron | 45.0% |
| CTCAGAAATTTGTCCGTGCT+TGG | + | chr2_4:62782770-62782789 | None:intergenic | 45.0% | |
| !! | ACAAGAGAAAGCATCGGAGT+AGG | - | chr2_4:62782830-62782849 | Msa0341310:intron | 45.0% |
| !! | CAAGAGAAAGCATCGGAGTA+GGG | - | chr2_4:62782831-62782850 | Msa0341310:intron | 45.0% |
| !! | TGAGTTTTGTGCGTCTCAAC+TGG | - | chr2_4:62782909-62782928 | Msa0341310:intron | 45.0% |
| TCAAGCTTAATGAGCCAGTG+TGG | - | chr2_4:62783536-62783555 | Msa0341310:intron | 45.0% | |
| ! | TAGGTGACGGTAAGTACAAG+TGG | + | chr2_4:62783969-62783988 | None:intergenic | 45.0% |
| CATATGCATGGTTACTCCTC+AGG | + | chr2_4:62784153-62784172 | None:intergenic | 45.0% | |
| AACCATGCATATGAACCTGC+AGG | - | chr2_4:62784160-62784179 | Msa0341310:intron | 45.0% | |
| TGCAACTACTGTCTACTGTC+AGG | + | chr2_4:62784306-62784325 | None:intergenic | 45.0% | |
| CATGGAGAGCTCATTGAGTT+TGG | + | chr2_4:62784634-62784653 | None:intergenic | 45.0% | |
| GCGTTGAATGTCCTGTAGTA+TGG | + | chr2_4:62784719-62784738 | None:intergenic | 45.0% | |
| TCCATTGTCTTCTTGCTTGG+AGG | - | chr2_4:62785317-62785336 | Msa0341310:intron | 45.0% | |
| ACCTCCAAGCAAGAAGACAA+TGG | + | chr2_4:62785321-62785340 | None:intergenic | 45.0% | |
| TCTTGCTTGGAGGTAGTTCT+TGG | - | chr2_4:62785327-62785346 | Msa0341310:intron | 45.0% | |
| AAGCCGACGATATGAATGCT+TGG | - | chr2_4:62785670-62785689 | Msa0341310:intron | 45.0% | |
| AGCCGACGATATGAATGCTT+GGG | - | chr2_4:62785671-62785690 | Msa0341310:intron | 45.0% | |
| CACCCAAGCATTCATATCGT+CGG | + | chr2_4:62785676-62785695 | None:intergenic | 45.0% | |
| GACGATATGAATGCTTGGGT+GGG | - | chr2_4:62785675-62785694 | Msa0341310:intron | 45.0% | |
| ATATGAATGCTTGGGTGGGT+TGG | - | chr2_4:62785679-62785698 | Msa0341310:intron | 45.0% | |
| CAGATGAAAATTCTAGCGCG+GGG | - | chr2_4:62785728-62785747 | Msa0341310:intron | 45.0% | |
| AAGAAACAACAACTGGGCAC+TGG | + | chr2_4:62786377-62786396 | None:intergenic | 45.0% | |
| ! | AGCAACAGAGAATCGATTCC+AGG | + | chr2_4:62786614-62786633 | None:intergenic | 45.0% |
| ! | TTGGGTCAGATCCACGTTTT+AGG | - | chr2_4:62786673-62786692 | Msa0341310:intron | 45.0% |
| ! | TGGGTCAGATCCACGTTTTA+GGG | - | chr2_4:62786674-62786693 | Msa0341310:intron | 45.0% |
| ACGCCATTTCAACCTTCTCA+TGG | + | chr2_4:62786726-62786745 | None:intergenic | 45.0% | |
| TGGCGTTTGAGAGTGAAAAC+GGG | - | chr2_4:62786740-62786759 | Msa0341310:intron | 45.0% | |
| !! | TGAGAGTGAAAACGGGCTTT+TGG | - | chr2_4:62786747-62786766 | Msa0341310:intron | 45.0% |
| !! | GAGAGTGAAAACGGGCTTTT+GGG | - | chr2_4:62786748-62786767 | Msa0341310:intron | 45.0% |
| !! | AGAGTGAAAACGGGCTTTTG+GGG | - | chr2_4:62786749-62786768 | Msa0341310:intron | 45.0% |
| TACCAATGGCGTTGCTTCTA+CGG | + | chr2_4:62786885-62786904 | None:intergenic | 45.0% | |
| GTCTTGCAAAACCTAGTTCG+TGG | - | chr2_4:62787442-62787461 | Msa0341310:intron | 45.0% | |
| GGGAACGAAATATTGGCCAA+AGG | + | chr2_4:62787811-62787830 | None:intergenic | 45.0% | |
| TGCAGACGGGAACGAAATAT+TGG | + | chr2_4:62787818-62787837 | None:intergenic | 45.0% | |
| TAAAAGCTTGTGTGGTTGGC+TGG | - | chr2_4:62788370-62788389 | Msa0341310:CDS | 45.0% | |
| GTTGACACTGAAGGAGCAAT+TGG | - | chr2_4:62788445-62788464 | Msa0341310:CDS | 45.0% | |
| !! | CATAATAATATTATATAAAA+AGG | + | chr2_4:62783499-62783518 | None:intergenic | 5.0% |
| !! | TTTATGAAATAAAAAAAAAT+TGG | + | chr2_4:62783653-62783672 | None:intergenic | 5.0% |
| !!! | ATAAATTTTTAAATATTCTA+TGG | - | chr2_4:62783668-62783687 | Msa0341310:intron | 5.0% |
| !! | ATAAATTAATGTTAAAAAAA+GGG | + | chr2_4:62786131-62786150 | None:intergenic | 5.0% |
| !! | AATAAATTAATGTTAAAAAA+AGG | + | chr2_4:62786132-62786151 | None:intergenic | 5.0% |
| GTCTCAGGTTCGATTCTCTC+TGG | - | chr2_4:62782445-62782464 | Msa0341310:intron | 50.0% | |
| GGTTTCAGAACAGACGTGCT+AGG | - | chr2_4:62782806-62782825 | Msa0341310:intron | 50.0% | |
| TGAATCAGAAGTGGAGACCG+AGG | - | chr2_4:62782861-62782880 | Msa0341310:intron | 50.0% | |
| !!! | GCGTCTCAACTGGCTTTTGA+TGG | - | chr2_4:62782919-62782938 | Msa0341310:intron | 50.0% |
| CTCCTGCAGGTTCATATGCA+TGG | + | chr2_4:62784165-62784184 | None:intergenic | 50.0% | |
| TCTGTGTTGTGTTCTCCTGC+AGG | + | chr2_4:62784178-62784197 | None:intergenic | 50.0% | |
| GCAGGAGAACACAACACAGA+AGG | - | chr2_4:62784178-62784197 | Msa0341310:intron | 50.0% | |
| GCTGCCGTGTACTTCAAGAA+AGG | - | chr2_4:62785110-62785129 | Msa0341310:intron | 50.0% | |
| CAGCTTATGAGTGCACACAC+CGG | + | chr2_4:62785388-62785407 | None:intergenic | 50.0% | |
| CATTACTCAAGCGCCAACCA+TGG | - | chr2_4:62785635-62785654 | Msa0341310:intron | 50.0% | |
| CGACGATATGAATGCTTGGG+TGG | - | chr2_4:62785674-62785693 | Msa0341310:intron | 50.0% | |
| GTGTGTGTTTGGTATAGCGG+TGG | - | chr2_4:62785833-62785852 | Msa0341310:intron | 50.0% | |
| GTGGATCTGACCCAAAACGT+GGG | + | chr2_4:62786668-62786687 | None:intergenic | 50.0% | |
| ATTGCCTCGTTGTCCGTAGA+AGG | - | chr2_4:62786821-62786840 | Msa0341310:intron | 50.0% | |
| AGCGCAAGTCATCTACTGAC+AGG | - | chr2_4:62787316-62787335 | Msa0341310:intron | 50.0% | |
| TTCACTGTGCATTGGAGGAG+TGG | - | chr2_4:62787365-62787384 | Msa0341310:intron | 50.0% | |
| TGCCAACATGGTCTGACCTT+TGG | - | chr2_4:62787792-62787811 | Msa0341310:intron | 50.0% | |
| TGTCAGCTCAGCGAAGTAAG+TGG | - | chr2_4:62788065-62788084 | Msa0341310:CDS | 50.0% | |
| GTCAGCTCAGCGAAGTAAGT+GGG | - | chr2_4:62788066-62788085 | Msa0341310:CDS | 50.0% | |
| TGAGACGGAGTCTCCAAGCA+AGG | - | chr2_4:62782714-62782733 | Msa0341310:intron | 55.0% | |
| ACTCGCAGAAACGACGCACA+TGG | + | chr2_4:62785493-62785512 | None:intergenic | 55.0% | |
| TGCGTCGTTTCTGCGAGTGT+TGG | - | chr2_4:62785495-62785514 | Msa0341310:intron | 55.0% | |
| ! | ATTGCAGTGCAGGTTGGCGT+TGG | + | chr2_4:62786410-62786429 | None:intergenic | 55.0% |
| AACGCCAACCTGCACTGCAA+TGG | - | chr2_4:62786409-62786428 | Msa0341310:intron | 55.0% | |
| ACGCCAACCTGCACTGCAAT+GGG | - | chr2_4:62786410-62786429 | Msa0341310:intron | 55.0% | |
| CGTGGATCTGACCCAAAACG+TGG | + | chr2_4:62786669-62786688 | None:intergenic | 55.0% | |
| AGTGCCTTCTACGGACAACG+AGG | + | chr2_4:62786828-62786847 | None:intergenic | 55.0% | |
| CGTTGCTTCTACGGACAACG+AGG | + | chr2_4:62786876-62786895 | None:intergenic | 55.0% | |
| GTCCGTAGAAGCAACGCCAT+TGG | - | chr2_4:62786880-62786899 | Msa0341310:intron | 55.0% | |
| GCATTGGAGGAGTGGTGACA+TGG | - | chr2_4:62787373-62787392 | Msa0341310:intron | 55.0% | |
| AGGAGTGGTGACATGGCAAG+TGG | - | chr2_4:62787380-62787399 | Msa0341310:intron | 55.0% | |
| GGAGTGGTGACATGGCAAGT+GGG | - | chr2_4:62787381-62787400 | Msa0341310:intron | 55.0% | |
| GGCCAAAGGTCAGACCATGT+TGG | + | chr2_4:62787797-62787816 | None:intergenic | 55.0% | |
| AAAATTCTAGCGCGGGGCGC+AGG | - | chr2_4:62785734-62785753 | Msa0341310:intron | 60.0% | |
| !! | TGCAGGTTGGCGTTGGCTGT+AGG | + | chr2_4:62786403-62786422 | None:intergenic | 60.0% |
| CGCCAACCTGCACTGCAATG+GGG | - | chr2_4:62786411-62786430 | Msa0341310:intron | 60.0% | |
| CACCCCATTGCAGTGCAGGT+TGG | + | chr2_4:62786416-62786435 | None:intergenic | 60.0% | |
| ACCTGCACTGCAATGGGGTG+CGG | - | chr2_4:62786416-62786435 | Msa0341310:intron | 60.0% | |
| ! | AGCGCGGGGCGCAGGTTTTA+TGG | - | chr2_4:62785742-62785761 | Msa0341310:intron | 65.0% |
| !! | GCGCGGGGCGCAGGTTTTAT+GGG | - | chr2_4:62785743-62785762 | Msa0341310:intron | 65.0% |
| GCCGCACCCCATTGCAGTGC+AGG | + | chr2_4:62786420-62786439 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 62782272 | 62788523 | 62782272 | ID=Msa0341310;Name=Msa0341310 |
| chr2_4 | mRNA | 62782272 | 62788523 | 62782272 | ID=Msa0341310-mRNA-1;Parent=Msa0341310;Name=Msa0341310-mRNA-1;_AED=0.18;_eAED=0.19;_QI=0|0|0|1|1|1|3|0|206 |
| chr2_4 | exon | 62788370 | 62788523 | 62788370 | ID=Msa0341310-mRNA-1:exon:20036;Parent=Msa0341310-mRNA-1 |
| chr2_4 | exon | 62787855 | 62788151 | 62787855 | ID=Msa0341310-mRNA-1:exon:20035;Parent=Msa0341310-mRNA-1 |
| chr2_4 | exon | 62782272 | 62782441 | 62782272 | ID=Msa0341310-mRNA-1:exon:20034;Parent=Msa0341310-mRNA-1 |
| chr2_4 | CDS | 62788370 | 62788523 | 62788370 | ID=Msa0341310-mRNA-1:cds;Parent=Msa0341310-mRNA-1 |
| chr2_4 | CDS | 62787855 | 62788151 | 62787855 | ID=Msa0341310-mRNA-1:cds;Parent=Msa0341310-mRNA-1 |
| chr2_4 | CDS | 62782272 | 62782441 | 62782272 | ID=Msa0341310-mRNA-1:cds;Parent=Msa0341310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
