Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417520 | sp|O81788|WOX13_ARATH | 50.667 | 150 | 51 | 2 | 16 | 142 | 35 | 184 | 3.15e-37 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417520 | G7KVS3 | 61.988 | 171 | 46 | 4 | 5 | 164 | 1 | 163 | 9.59e-58 | 189 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1417520 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0304910 | Msa1417520 | 0.993196 | 4.334069e-198 | -8.615850e-47 |
| Msa0341300 | Msa1417520 | 0.831185 | 1.926886e-55 | -8.615850e-47 |
| Msa0341310 | Msa1417520 | 0.982066 | 3.812321e-154 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417520 | MtrunA17_Chr7g0222981 | 61.988 | 171 | 46 | 4 | 5 | 164 | 1 | 163 | 1.85e-61 | 189 |
| Msa1417520 | MtrunA17_Chr1g0212511 | 53.529 | 170 | 54 | 4 | 16 | 164 | 22 | 187 | 1.89e-50 | 164 |
| Msa1417520 | MtrunA17_Chr3g0144021 | 46.853 | 143 | 54 | 2 | 18 | 138 | 19 | 161 | 2.71e-39 | 134 |
| Msa1417520 | MtrunA17_Chr8g0392991 | 34.694 | 147 | 81 | 6 | 62 | 204 | 96 | 231 | 9.57e-16 | 74.7 |
| Msa1417520 | MtrunA17_Chr4g0043891 | 29.167 | 144 | 97 | 3 | 62 | 205 | 8 | 146 | 1.40e-13 | 67.4 |
| Msa1417520 | MtrunA17_Chr2g0283141 | 41.935 | 62 | 36 | 0 | 62 | 123 | 55 | 116 | 9.11e-12 | 63.5 |
| Msa1417520 | MtrunA17_Chr7g0223471 | 34.483 | 87 | 52 | 1 | 37 | 123 | 27 | 108 | 6.62e-11 | 60.8 |
| Msa1417520 | MtrunA17_Chr7g0238431 | 37.879 | 66 | 41 | 0 | 62 | 127 | 8 | 73 | 6.80e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417520 | AT4G35550.1 | 50.667 | 150 | 51 | 2 | 16 | 142 | 35 | 184 | 3.20e-38 | 133 |
| Msa1417520 | AT1G20700.3 | 42.754 | 138 | 58 | 1 | 5 | 121 | 17 | 154 | 1.08e-34 | 122 |
| Msa1417520 | AT1G20700.1 | 42.754 | 138 | 58 | 1 | 5 | 121 | 17 | 154 | 1.25e-34 | 122 |
| Msa1417520 | AT1G20710.1 | 43.284 | 134 | 55 | 3 | 18 | 130 | 14 | 147 | 3.87e-26 | 100 |
| Msa1417520 | AT1G20700.2 | 56.923 | 65 | 28 | 0 | 57 | 121 | 28 | 92 | 1.25e-24 | 95.1 |
| Msa1417520 | AT5G45980.1 | 40.476 | 84 | 46 | 2 | 44 | 123 | 33 | 116 | 1.17e-13 | 68.9 |
| Msa1417520 | AT3G18010.1 | 38.571 | 70 | 43 | 0 | 62 | 131 | 76 | 145 | 2.77e-12 | 65.1 |
| Msa1417520 | AT2G33880.2 | 35.366 | 82 | 46 | 1 | 49 | 123 | 35 | 116 | 1.28e-11 | 63.2 |
| Msa1417520 | AT2G33880.1 | 35.366 | 82 | 46 | 1 | 49 | 123 | 35 | 116 | 1.37e-11 | 63.2 |
| Msa1417520 | AT2G28610.1 | 38.462 | 65 | 40 | 0 | 62 | 126 | 8 | 72 | 4.25e-11 | 60.8 |
| Msa1417520 | AT2G01500.1 | 43.636 | 55 | 31 | 0 | 62 | 116 | 61 | 115 | 6.29e-11 | 60.8 |
Find 29 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACTTACTAGTGCGATTT+TGG | 0.200209 | tig0024490:+24988 | None:intergenic |
| CTGAGACCAATGTATATAAT+TGG | 0.221984 | tig0024490:-24602 | Msa1417520:CDS |
| TGTCACCAACATTGATTATC+AGG | 0.343112 | tig0024490:+18886 | None:intergenic |
| ACCTGTACAACTTCAAACTA+TGG | 0.358508 | tig0024490:-24712 | Msa1417520:CDS |
| TCCAAGCAAGGAAAAGATAA+AGG | 0.385115 | tig0024490:-24661 | Msa1417520:CDS |
| CTCAGAAATTTGTCCGTGCT+TGG | 0.426170 | tig0024490:+24620 | None:intergenic |
| TAAAAGCTTGTGTGGTTGGC+TGG | 0.444898 | tig0024490:-19019 | Msa1417520:CDS |
| TTGGACTAGATATGAATTCA+AGG | 0.448892 | tig0024490:-24752 | Msa1417520:intron |
| TCCATAGTTTGAAGTTGTAC+AGG | 0.451456 | tig0024490:+24711 | None:intergenic |
| GTTGACACTGAAGGAGCAAT+TGG | 0.457740 | tig0024490:-18944 | Msa1417520:CDS |
| GAAAGGCATGGAGATCTTGA+TGG | 0.460857 | tig0024490:-25135 | None:intergenic |
| TATGAATTCAAGGCATCGTT+GGG | 0.483810 | tig0024490:-24742 | Msa1417520:CDS |
| CAAGAGAAAGCATCGGAGTA+GGG | 0.507277 | tig0024490:-24556 | Msa1417520:CDS |
| ACAAGAGAAAGCATCGGAGT+AGG | 0.511487 | tig0024490:-24557 | Msa1417520:CDS |
| ACACTAAAAGCTTGTGTGGT+TGG | 0.543812 | tig0024490:-19023 | Msa1417520:CDS |
| GCAAATATTTGAAGATGAGA+CGG | 0.560708 | tig0024490:-24688 | Msa1417520:CDS |
| CTGAAACCAATTATATACAT+TGG | 0.563327 | tig0024490:+24596 | None:intergenic |
| GGTTTCAGAACAGACGTGCT+AGG | 0.577434 | tig0024490:-24581 | Msa1417520:CDS |
| GTTGTTGATTTAGCCAAGCA+CGG | 0.577536 | tig0024490:-24633 | Msa1417520:CDS |
| ATATGAATTCAAGGCATCGT+TGG | 0.578747 | tig0024490:-24743 | Msa1417520:CDS |
| GAATCAAGAGTTGACACTGA+AGG | 0.584888 | tig0024490:-18953 | Msa1417520:CDS |
| GTTTGAAGTTGTACAGGTGT+TGG | 0.595078 | tig0024490:+24717 | None:intergenic |
| GGTTAATGTTGAATCAGAAG+TGG | 0.597468 | tig0024490:-24535 | Msa1417520:CDS |
| AGCTACCTGATAATCAATGT+TGG | 0.644611 | tig0024490:-18891 | Msa1417520:CDS |
| TGAGACGGAGTCTCCAAGCA+AGG | 0.651947 | tig0024490:-24673 | Msa1417520:CDS |
| CTTATCATCAGAATCAACCT+CGG | 0.655992 | tig0024490:+24509 | None:intergenic |
| CTAGGTACAAGAGAAAGCAT+CGG | 0.670064 | tig0024490:-24563 | Msa1417520:CDS |
| ATGCACACTAAAAGCTTGTG+TGG | 0.681176 | tig0024490:-19027 | Msa1417520:CDS |
| TGAATCAGAAGTGGAGACCG+AGG | 0.711591 | tig0024490:-24526 | Msa1417520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAAAAAAAAAAAAGTTA+AGG | - | tig0024490:19125-19144 | Msa1417520:intron | 10.0% |
| !! | TCAAAAAAAAAAAAAGTTAA+GGG | - | tig0024490:19126-19145 | Msa1417520:intron | 10.0% |
| !!! | CAATTTTTTTTTTTTTTTGA+GGG | - | tig0024490:19692-19711 | Msa1417520:intron | 10.0% |
| !!! | AATTTTTTTTTTTTTTTGAG+GGG | - | tig0024490:19693-19712 | Msa1417520:intron | 10.0% |
| !!! | TAAAATTTTATAATAAAGAG+AGG | + | tig0024490:20684-20703 | None:intergenic | 10.0% |
| !! | ATAAATTTCTTAAATTCAAA+CGG | + | tig0024490:21524-21543 | None:intergenic | 10.0% |
| !!! | TTCAAATATTTTTAGAATTT+AGG | + | tig0024490:22238-22257 | None:intergenic | 10.0% |
| !! | ATAATTATGTAAAATGAAAA+TGG | + | tig0024490:22686-22705 | None:intergenic | 10.0% |
| !!! | TGATTTTTTTTTTTTTTTGA+GGG | - | tig0024490:22839-22858 | Msa1417520:intron | 10.0% |
| !!! | TATTTTTGTTTTTTTTTTGA+AGG | + | tig0024490:22930-22949 | None:intergenic | 10.0% |
| !!! | TTCTTTTTCAATATTTATTT+TGG | + | tig0024490:24857-24876 | None:intergenic | 10.0% |
| !!! | GCAATTTTTTTTTTTTTTTG+AGG | - | tig0024490:19691-19710 | Msa1417520:intron | 15.0% |
| !!! | TCTTGTGATTTAATTTAATT+TGG | - | tig0024490:20190-20209 | Msa1417520:intron | 15.0% |
| !! | TGTCAATTAAAAAATATTCA+TGG | - | tig0024490:20247-20266 | Msa1417520:intron | 15.0% |
| !! | TTATTTATACTTCATTGTAT+TGG | - | tig0024490:20561-20580 | Msa1417520:intron | 15.0% |
| !!! | CAAAGAAAAATTCTTTTATT+AGG | + | tig0024490:20617-20636 | None:intergenic | 15.0% |
| !!! | TTGTATGTTTTAGATTTTTT+TGG | + | tig0024490:21488-21507 | None:intergenic | 15.0% |
| !! | TTAGTTAAATACAAATAGAA+AGG | + | tig0024490:22659-22678 | None:intergenic | 15.0% |
| !!! | AACTTATCTAAAATCATAAA+TGG | - | tig0024490:22709-22728 | Msa1417520:intron | 15.0% |
| !!! | GTGATTTTTTTTTTTTTTTG+AGG | - | tig0024490:22838-22857 | Msa1417520:intron | 15.0% |
| !!! | TTTATTTTTCTTTTGTTAAG+AGG | + | tig0024490:22903-22922 | None:intergenic | 15.0% |
| !! | TAGTAAAACAACATTTAAAA+AGG | + | tig0024490:23627-23646 | None:intergenic | 15.0% |
| !! | ATAAAAAAAAAGTTGCTTAT+AGG | - | tig0024490:23725-23744 | Msa1417520:intron | 15.0% |
| !! | GAAAACAAAAACATATATAA+TGG | - | tig0024490:23822-23841 | Msa1417520:intron | 15.0% |
| !! | AATAAAACAAAAACAAAAGT+AGG | - | tig0024490:23883-23902 | Msa1417520:intron | 15.0% |
| !! | AAAATTGGAAATTGTAAAAA+GGG | - | tig0024490:24159-24178 | Msa1417520:intron | 15.0% |
| !!! | GTATTTAATTATTTCAGTTT+TGG | + | tig0024490:24835-24854 | None:intergenic | 15.0% |
| !! | AACTGAATAAAATAACAATC+TGG | + | tig0024490:19209-19228 | None:intergenic | 20.0% |
| !! | TATAAACTACATTCTTTAGT+TGG | + | tig0024490:19582-19601 | None:intergenic | 20.0% |
| !! | AAAAACATAGAAACATGTAA+CGG | + | tig0024490:19617-19636 | None:intergenic | 20.0% |
| !!! | ATTAGTATTTTACGAATGTA+GGG | - | tig0024490:19664-19683 | Msa1417520:intron | 20.0% |
| !! | TCTTTGACTAAATTAACTAA+TGG | - | tig0024490:19913-19932 | Msa1417520:intron | 20.0% |
| !! | TAAAAAATTCTTGCAATACA+TGG | + | tig0024490:20406-20425 | None:intergenic | 20.0% |
| !!! | AAAATTCTTTTATTAGGTGA+CGG | + | tig0024490:20611-20630 | None:intergenic | 20.0% |
| !!! | ATATTTTGTCACATCATATA+AGG | + | tig0024490:21370-21389 | None:intergenic | 20.0% |
| !! | AAGGAATTATGAAGAAAATT+TGG | + | tig0024490:21464-21483 | None:intergenic | 20.0% |
| !! | AAATTTATACCTATTAAGCA+AGG | - | tig0024490:21536-21555 | Msa1417520:intron | 20.0% |
| !! | AATTTATACCTATTAAGCAA+GGG | - | tig0024490:21537-21556 | Msa1417520:intron | 20.0% |
| !! | AAACAATTAAGTCATTCAAA+TGG | + | tig0024490:21775-21794 | None:intergenic | 20.0% |
| !!! | GTTTTTTCAAACTCAATTAT+TGG | + | tig0024490:21886-21905 | None:intergenic | 20.0% |
| !!! | TTTAGGAATTTCTGAAATTA+GGG | + | tig0024490:22221-22240 | None:intergenic | 20.0% |
| !!! | ATTTAGGAATTTCTGAAATT+AGG | + | tig0024490:22222-22241 | None:intergenic | 20.0% |
| !! | ATACAAATAGAAAGGTAATT+TGG | + | tig0024490:22651-22670 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGAGGGATTT+TGG | - | tig0024490:22846-22865 | Msa1417520:intron | 20.0% |
| !! | TTAACATCTATGAAGAAAAA+TGG | - | tig0024490:23131-23150 | Msa1417520:intron | 20.0% |
| !! | TAAATTGGAGAATAAGATAA+GGG | - | tig0024490:23180-23199 | Msa1417520:intron | 20.0% |
| !!! | CTTATTTGAGATTTAAACTT+TGG | - | tig0024490:23427-23446 | Msa1417520:intron | 20.0% |
| !!! | CTTATTTGAGATTTAAACTT+TGG | - | tig0024490:23427-23446 | Msa1417520:intron | 20.0% |
| !! | TTACCCTTAATTAATTATTG+CGG | - | tig0024490:23650-23669 | Msa1417520:intron | 20.0% |
| !! | AACAAAAACATATATAATGG+TGG | - | tig0024490:23825-23844 | Msa1417520:intron | 20.0% |
| !!! | TTTTCTATTCTTTTTCACTT+GGG | + | tig0024490:24108-24127 | None:intergenic | 20.0% |
| !!! | TTTTTCTATTCTTTTTCACT+TGG | + | tig0024490:24109-24128 | None:intergenic | 20.0% |
| !! | GAAAATTGGAAATTGTAAAA+AGG | - | tig0024490:24158-24177 | Msa1417520:intron | 20.0% |
| !!! | CATTCTAAGTTATTTTGTAT+TGG | + | tig0024490:24316-24335 | None:intergenic | 20.0% |
| !! | CAATACAAAATAACTTAGAA+TGG | - | tig0024490:24314-24333 | Msa1417520:intron | 20.0% |
| !! | TTTATATTGAATACCATAGT+TGG | + | tig0024490:24770-24789 | None:intergenic | 20.0% |
| !! | AACCTTATAATATAACCAAA+AGG | - | tig0024490:24914-24933 | Msa1417520:intron | 20.0% |
| !! | AGGAATTGAAATTCATTATT+TGG | + | tig0024490:24955-24974 | None:intergenic | 20.0% |
| !!! | CATAAACTGCAATTTGTTTT+CGG | + | tig0024490:18971-18990 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTATGCATTTGA+AGG | + | tig0024490:19013-19032 | None:intergenic | 25.0% |
| ! | TAAGTTCACTAGTAAGTTTA+GGG | - | tig0024490:19043-19062 | Msa1417520:intron | 25.0% |
| ! | CATGATGATCACATTTAATT+AGG | - | tig0024490:19176-19195 | Msa1417520:intron | 25.0% |
| !! | AAGAAAGTGTAACTGAATTT+AGG | + | tig0024490:19240-19259 | None:intergenic | 25.0% |
| !! | CAGTTACACTTTCTTTTTAT+TGG | - | tig0024490:19245-19264 | Msa1417520:intron | 25.0% |
| ! | CTGAAACCAATTATATACAT+TGG | + | tig0024490:19423-19442 | None:intergenic | 25.0% |
| !! | GATTAGTATTTTACGAATGT+AGG | - | tig0024490:19663-19682 | Msa1417520:intron | 25.0% |
| ! | TTAAAGAAAGACACATTTAG+AGG | - | tig0024490:19994-20013 | Msa1417520:intron | 25.0% |
| !!! | TGCAAGAATTTTTTAGCATT+TGG | - | tig0024490:20411-20430 | Msa1417520:intron | 25.0% |
| !!! | GCAAGAATTTTTTAGCATTT+GGG | - | tig0024490:20412-20431 | Msa1417520:intron | 25.0% |
| ! | ATTAGCTACAAGTACAAAAT+TGG | - | tig0024490:20861-20880 | Msa1417520:intron | 25.0% |
| ! | ATTGAAGTAGTTCAAATAAG+TGG | - | tig0024490:21067-21086 | Msa1417520:intron | 25.0% |
| !! | TCGTGAAAATTGTCTAAAAT+TGG | - | tig0024490:21172-21191 | Msa1417520:intron | 25.0% |
| ! | TAATTTCTGCATTATGGTTA+TGG | + | tig0024490:21297-21316 | None:intergenic | 25.0% |
| ! | GCTAATTAATTTCTGCATTA+TGG | + | tig0024490:21303-21322 | None:intergenic | 25.0% |
| !!! | TGTTTTAGATTTTTTTGGCA+AGG | + | tig0024490:21483-21502 | None:intergenic | 25.0% |
| ! | ATTTATACCTATTAAGCAAG+GGG | - | tig0024490:21538-21557 | Msa1417520:intron | 25.0% |
| ! | GGAATCAATTAAATAGATGA+TGG | + | tig0024490:21664-21683 | None:intergenic | 25.0% |
| ! | TGAATTATCAACATAGAAGA+TGG | + | tig0024490:21688-21707 | None:intergenic | 25.0% |
| ! | AATTGTTTCATCGTATAGAA+AGG | - | tig0024490:21787-21806 | Msa1417520:intron | 25.0% |
| ! | TAACATTGGATATACACTAT+TGG | + | tig0024490:21985-22004 | None:intergenic | 25.0% |
| ! | CACATCATAAAAAATGATGA+CGG | + | tig0024490:22161-22180 | None:intergenic | 25.0% |
| !!! | CATTAAGTCGATTTAACTTT+TGG | - | tig0024490:22811-22830 | Msa1417520:intron | 25.0% |
| ! | GCCCATAATATAAAAGTTAA+CGG | - | tig0024490:22961-22980 | Msa1417520:intron | 25.0% |
| !! | CCCGTTAACTTTTATATTAT+GGG | + | tig0024490:22965-22984 | None:intergenic | 25.0% |
| ! | CCCATAATATAAAAGTTAAC+GGG | - | tig0024490:22962-22981 | Msa1417520:intron | 25.0% |
| !! | ACCCGTTAACTTTTATATTA+TGG | + | tig0024490:22966-22985 | None:intergenic | 25.0% |
| ! | GTAAATTGGAGAATAAGATA+AGG | - | tig0024490:23179-23198 | Msa1417520:intron | 25.0% |
| ! | TTCACCAAAAATTAAAATCC+TGG | - | tig0024490:23222-23241 | Msa1417520:intron | 25.0% |
| !!! | GATTCCAGGATTTTAATTTT+TGG | + | tig0024490:23229-23248 | None:intergenic | 25.0% |
| ! | TACTATTCAAATTGTACCAA+TGG | + | tig0024490:23528-23547 | None:intergenic | 25.0% |
| ! | TCTCCGCAATAATTAATTAA+GGG | + | tig0024490:23656-23675 | None:intergenic | 25.0% |
| ! | TTCTCCGCAATAATTAATTA+AGG | + | tig0024490:23657-23676 | None:intergenic | 25.0% |
| ! | AAAAAAAAGTTGCTTATAGG+AGG | - | tig0024490:23728-23747 | Msa1417520:intron | 25.0% |
| !!! | TTTTTGTTTTCCTCAAAAGT+GGG | + | tig0024490:23813-23832 | None:intergenic | 25.0% |
| ! | GAATAGAAAAAAAAAACTCG+AGG | - | tig0024490:24118-24137 | Msa1417520:intron | 25.0% |
| ! | TAATGTGAGAACATGAAAAT+TGG | - | tig0024490:24144-24163 | Msa1417520:intron | 25.0% |
| ! | AAGAGTTGAGATATGAAAAT+TGG | - | tig0024490:24198-24217 | Msa1417520:intron | 25.0% |
| ! | AGAGTTGAGATATGAAAATT+GGG | - | tig0024490:24199-24218 | Msa1417520:intron | 25.0% |
| ! | GATGATTATATAAGCTTACA+TGG | + | tig0024490:24257-24276 | None:intergenic | 25.0% |
| !! | CTGACACAATTATATGATTT+TGG | + | tig0024490:24678-24697 | None:intergenic | 25.0% |
| !!! | TGCCTTTTGGTTATATTATA+AGG | + | tig0024490:24919-24938 | None:intergenic | 25.0% |
| GTAAGTTCACTAGTAAGTTT+AGG | - | tig0024490:19042-19061 | Msa1417520:intron | 30.0% | |
| ! | TTGGACTAGATATGAATTCA+AGG | - | tig0024490:19264-19283 | Msa1417520:intron | 30.0% |
| GCAAATATTTGAAGATGAGA+CGG | - | tig0024490:19328-19347 | Msa1417520:intron | 30.0% | |
| CTGAGACCAATGTATATAAT+TGG | - | tig0024490:19414-19433 | Msa1417520:intron | 30.0% | |
| ATAATGAAGCTTACCTTAGA+GGG | + | tig0024490:19748-19767 | None:intergenic | 30.0% | |
| AAAGACTATTGACACATTCT+AGG | - | tig0024490:20044-20063 | Msa1417520:intron | 30.0% | |
| ! | ATTTGTTTCCTCTCTTCTTT+TGG | - | tig0024490:20526-20545 | Msa1417520:intron | 30.0% |
| ! | TTATGGTTATGGAAGTATAC+TGG | + | tig0024490:21286-21305 | None:intergenic | 30.0% |
| ! | ATTTGGAGTCACATCATATA+CGG | + | tig0024490:21447-21466 | None:intergenic | 30.0% |
| TAACTCGAAATCTAAAAGTC+CGG | - | tig0024490:21576-21595 | Msa1417520:intron | 30.0% | |
| GTATACAATGTTAGATATGC+AGG | + | tig0024490:21638-21657 | None:intergenic | 30.0% | |
| ATTATCAACATAGAAGATGG+AGG | + | tig0024490:21685-21704 | None:intergenic | 30.0% | |
| AAAACCTTTCTTGAAGTACA+CGG | + | tig0024490:21746-21765 | None:intergenic | 30.0% | |
| CTAATGTACATCCATATTTG+GGG | + | tig0024490:21816-21835 | None:intergenic | 30.0% | |
| GCTAATGTACATCCATATTT+GGG | + | tig0024490:21817-21836 | None:intergenic | 30.0% | |
| TGCTAATGTACATCCATATT+TGG | + | tig0024490:21818-21837 | None:intergenic | 30.0% | |
| TGATATGCTAGGTAAAATGA+TGG | - | tig0024490:21855-21874 | Msa1417520:intron | 30.0% | |
| TTGAGTTTGAAAAAACTCTG+AGG | - | tig0024490:21890-21909 | Msa1417520:intron | 30.0% | |
| !!! | GATTTTGAAATTGGTGCAAA+AGG | + | tig0024490:22048-22067 | None:intergenic | 30.0% |
| !!! | AATGGAGAGGATTTTGAAAT+TGG | + | tig0024490:22057-22076 | None:intergenic | 30.0% |
| !! | CACTAAGAGTATTGTTCAAT+AGG | + | tig0024490:22445-22464 | None:intergenic | 30.0% |
| ! | GATTTTGCTTAAAAGTGAGT+TGG | - | tig0024490:22523-22542 | Msa1417520:intron | 30.0% |
| GGATGTGAATTGATTATGTT+TGG | - | tig0024490:22544-22563 | Msa1417520:intron | 30.0% | |
| !! | TCTTATGAGTTGATGTTGTT+TGG | - | tig0024490:22588-22607 | Msa1417520:intron | 30.0% |
| !! | AGTCGATTTAACTTTTGGAA+CGG | - | tig0024490:22816-22835 | Msa1417520:intron | 30.0% |
| !!! | TTTTTTGAGGGATTTTGGAA+CGG | - | tig0024490:22851-22870 | Msa1417520:intron | 30.0% |
| GAAAAAGACGTGTAGTAAAT+TGG | - | tig0024490:23165-23184 | Msa1417520:intron | 30.0% | |
| GTTTCTTTCAAGCTACAAAT+TGG | + | tig0024490:23275-23294 | None:intergenic | 30.0% | |
| AAAATCAATTCCCTAAAACG+TGG | + | tig0024490:23316-23335 | None:intergenic | 30.0% | |
| GACACTTAATAAGTAACTGA+GGG | + | tig0024490:23553-23572 | None:intergenic | 30.0% | |
| AGACACTTAATAAGTAACTG+AGG | + | tig0024490:23554-23573 | None:intergenic | 30.0% | |
| !! | GGAGGAAGTATATTTTTGTT+TGG | - | tig0024490:23746-23765 | Msa1417520:intron | 30.0% |
| !!! | GTTTTTGTTTTCCTCAAAAG+TGG | + | tig0024490:23814-23833 | None:intergenic | 30.0% |
| GACTTAAGTCTGATATGTAA+GGG | + | tig0024490:24054-24073 | None:intergenic | 30.0% | |
| AGACTTAAGTCTGATATGTA+AGG | + | tig0024490:24055-24074 | None:intergenic | 30.0% | |
| ATGAAAATTGGGAAAACATG+AGG | - | tig0024490:24210-24229 | Msa1417520:intron | 30.0% | |
| TATATAAGCTTACATGGAAG+TGG | + | tig0024490:24251-24270 | None:intergenic | 30.0% | |
| !! | AGAATGTTAATTTGCCAACA+TGG | - | tig0024490:24407-24426 | Msa1417520:intron | 30.0% |
| ! | TGAACTTACTAGTGCGATTT+TGG | + | tig0024490:19031-19050 | None:intergenic | 35.0% |
| ! | ATTCTCTCTGGTGTCAATTT+AGG | - | tig0024490:19085-19104 | Msa1417520:intron | 35.0% |
| !! | ATATGAATTCAAGGCATCGT+TGG | - | tig0024490:19273-19292 | Msa1417520:intron | 35.0% |
| !! | TATGAATTCAAGGCATCGTT+GGG | - | tig0024490:19274-19293 | Msa1417520:intron | 35.0% |
| ACCTGTACAACTTCAAACTA+TGG | - | tig0024490:19304-19323 | Msa1417520:intron | 35.0% | |
| ! | TCCATAGTTTGAAGTTGTAC+AGG | + | tig0024490:19308-19327 | None:intergenic | 35.0% |
| TCCAAGCAAGGAAAAGATAA+AGG | - | tig0024490:19355-19374 | Msa1417520:intron | 35.0% | |
| ! | TCCTTTATCTTTTCCTTGCT+TGG | + | tig0024490:19359-19378 | None:intergenic | 35.0% |
| GGTTAATGTTGAATCAGAAG+TGG | - | tig0024490:19481-19500 | Msa1417520:intron | 35.0% | |
| CTTATCATCAGAATCAACCT+CGG | + | tig0024490:19510-19529 | None:intergenic | 35.0% | |
| ! | TAGAAACATGTAACGGAAGA+AGG | + | tig0024490:19610-19629 | None:intergenic | 35.0% |
| !!! | TTTTTTGAGGGGTTGAATGA+AGG | - | tig0024490:19704-19723 | Msa1417520:intron | 35.0% |
| !! | TTTTTGAGGGGTTGAATGAA+GGG | - | tig0024490:19705-19724 | Msa1417520:intron | 35.0% |
| CATAATGAAGCTTACCTTAG+AGG | + | tig0024490:19749-19768 | None:intergenic | 35.0% | |
| ! | TTTGAAGTCAACTTTGAGCA+AGG | + | tig0024490:19772-19791 | None:intergenic | 35.0% |
| GACATTGTCTAACACATCAA+GGG | + | tig0024490:19828-19847 | None:intergenic | 35.0% | |
| TGACATTGTCTAACACATCA+AGG | + | tig0024490:19829-19848 | None:intergenic | 35.0% | |
| ACTAATGGAAGAGACATTCT+AGG | - | tig0024490:19928-19947 | Msa1417520:intron | 35.0% | |
| GGATCAAGCTAACTAACAAA+AGG | - | tig0024490:19949-19968 | Msa1417520:intron | 35.0% | |
| CACTGTGTTTGTATTATGAG+TGG | - | tig0024490:20436-20455 | Msa1417520:intron | 35.0% | |
| !! | ACCACATATTACTTTTCGCA+GGG | - | tig0024490:20723-20742 | Msa1417520:intron | 35.0% |
| AACACAGAAGGTTGACATTT+GGG | - | tig0024490:20819-20838 | Msa1417520:intron | 35.0% | |
| !!! | CAAAATTGGTAGCGTGTTTT+TGG | - | tig0024490:20875-20894 | Msa1417520:intron | 35.0% |
| CATGACTACATTATGTGATG+CGG | - | tig0024490:20973-20992 | Msa1417520:intron | 35.0% | |
| ATGACTACATTATGTGATGC+GGG | - | tig0024490:20974-20993 | Msa1417520:intron | 35.0% | |
| GTGTATAATAGCCATACTAC+AGG | - | tig0024490:21334-21353 | Msa1417520:intron | 35.0% | |
| GTGCAATATGTTGATATGCT+AGG | - | tig0024490:21844-21863 | Msa1417520:intron | 35.0% | |
| ! | TCCAATGTTAGTTCTTTCTC+CGG | - | tig0024490:21995-22014 | Msa1417520:intron | 35.0% |
| TCAAGCACATGAGATTGAAA+TGG | + | tig0024490:22075-22094 | None:intergenic | 35.0% | |
| TCTAGAAATTGTTCCATGGT+TGG | + | tig0024490:22280-22299 | None:intergenic | 35.0% | |
| CAATACTCTTAGTGTGTGTT+TGG | - | tig0024490:22451-22470 | Msa1417520:intron | 35.0% | |
| TTAGTGTGTGTTTGGTATAG+CGG | - | tig0024490:22459-22478 | Msa1417520:intron | 35.0% | |
| ! | TAAAAGTTAACGGGTCAAAG+AGG | - | tig0024490:22971-22990 | Msa1417520:intron | 35.0% |
| AGGTTGAAGAAACAACAACT+GGG | + | tig0024490:23012-23031 | None:intergenic | 35.0% | |
| ! | TAGGTTGAAGAAACAACAAC+TGG | + | tig0024490:23013-23032 | None:intergenic | 35.0% |
| ! | TTGAAAGAAACCCACGTTTT+GGG | - | tig0024490:23284-23303 | Msa1417520:intron | 35.0% |
| ATCTCAAATAAGTGCCTGTT+TGG | + | tig0024490:23419-23438 | None:intergenic | 35.0% | |
| TCTCAAATAAGTGCCTTCTA+CGG | + | tig0024490:23466-23485 | None:intergenic | 35.0% | |
| !! | GAAATATGAACCCACTTTTG+AGG | - | tig0024490:23800-23819 | Msa1417520:intron | 35.0% |
| ACATATATAATGGTGGTTGC+TGG | - | tig0024490:23832-23851 | Msa1417520:intron | 35.0% | |
| AGGAATCTCTTGTGTACTAA+TGG | - | tig0024490:23903-23922 | Msa1417520:intron | 35.0% | |
| !!! | GTTTTTAGTTCACTGTGCAT+TGG | - | tig0024490:23986-24005 | Msa1417520:intron | 35.0% |
| CTTAGTAAGCATCTCAAACA+AGG | - | tig0024490:24378-24397 | Msa1417520:intron | 35.0% | |
| GACATTGATGTTGTTGGATA+GGG | + | tig0024490:24545-24564 | None:intergenic | 35.0% | |
| CTATCCAACAACATCAATGT+CGG | - | tig0024490:24544-24563 | Msa1417520:CDS | 35.0% | |
| CTTACAATATTGTACAGCAC+TGG | - | tig0024490:24611-24630 | Msa1417520:CDS | 35.0% | |
| TCTTGAAATGCAACCAACTA+TGG | - | tig0024490:24754-24773 | Msa1417520:intron | 35.0% | |
| ACCAAAAGGCAATAAAAGCA+AGG | - | tig0024490:24928-24947 | Msa1417520:intron | 35.0% | |
| !! | TCCTTGCTTTTATTGCCTTT+TGG | + | tig0024490:24932-24951 | None:intergenic | 35.0% |
| AGCTACCTGATAATCAATGT+TGG | - | tig0024490:25125-25144 | Msa1417520:CDS | 35.0% | |
| ! | TCTCTGGTGTCAATTTAGGT+GGG | - | tig0024490:19089-19108 | Msa1417520:intron | 40.0% |
| ! | GTTTGAAGTTGTACAGGTGT+TGG | + | tig0024490:19302-19321 | None:intergenic | 40.0% |
| !! | GTTGTTGATTTAGCCAAGCA+CGG | - | tig0024490:19383-19402 | Msa1417520:intron | 40.0% |
| ! | CTAGGTACAAGAGAAAGCAT+CGG | - | tig0024490:19453-19472 | Msa1417520:intron | 40.0% |
| GCAAGTTAATAGTCCCTCTA+AGG | - | tig0024490:19732-19751 | Msa1417520:intron | 40.0% | |
| ! | ACTAACAAAAGGTATGCTCG+AGG | - | tig0024490:19960-19979 | Msa1417520:intron | 40.0% |
| ! | CTAACAAAAGGTATGCTCGA+GGG | - | tig0024490:19961-19980 | Msa1417520:intron | 40.0% |
| TAAGCTTGAGCAATACGTCA+GGG | + | tig0024490:20154-20173 | None:intergenic | 40.0% | |
| TTAAGCTTGAGCAATACGTC+AGG | + | tig0024490:20155-20174 | None:intergenic | 40.0% | |
| TAAATCACAAGACTCCACAC+TGG | + | tig0024490:20182-20201 | None:intergenic | 40.0% | |
| ! | TTTTCGCTCTTGCAATTACG+AGG | - | tig0024490:20494-20513 | Msa1417520:intron | 40.0% |
| CAACTCAACCAAAAGAAGAG+AGG | + | tig0024490:20537-20556 | None:intergenic | 40.0% | |
| !! | CACCACATATTACTTTTCGC+AGG | - | tig0024490:20722-20741 | Msa1417520:intron | 40.0% |
| TCCCTGCGAAAAGTAATATG+TGG | + | tig0024490:20727-20746 | None:intergenic | 40.0% | |
| GGGAGTAGCAATTATCTTAC+TGG | - | tig0024490:20743-20762 | Msa1417520:intron | 40.0% | |
| !! | TGGAAAAATGAAAGCACCTG+AGG | - | tig0024490:20763-20782 | Msa1417520:intron | 40.0% |
| CAACACAGAAGGTTGACATT+TGG | - | tig0024490:20818-20837 | Msa1417520:intron | 40.0% | |
| ACACAGAAGGTTGACATTTG+GGG | - | tig0024490:20820-20839 | Msa1417520:intron | 40.0% | |
| TTGGTTGACAAAGAAGACTC+TGG | - | tig0024490:21191-21210 | Msa1417520:intron | 40.0% | |
| ATGGAGAGCTCATTGAGTTT+GGG | + | tig0024490:21262-21281 | None:intergenic | 40.0% | |
| ! | GTTATGGAAGTATACTGGCA+TGG | + | tig0024490:21281-21300 | None:intergenic | 40.0% |
| ACTTTAGCCCCTTGCTTAAT+AGG | + | tig0024490:21548-21567 | None:intergenic | 40.0% | |
| TAAAAGTCCGGTTGCATTTC+AGG | - | tig0024490:21588-21607 | Msa1417520:intron | 40.0% | |
| AAAAGTCCGGTTGCATTTCA+GGG | - | tig0024490:21589-21608 | Msa1417520:intron | 40.0% | |
| AAAGAACCCTGAAATGCAAC+CGG | + | tig0024490:21598-21617 | None:intergenic | 40.0% | |
| TAGAAAGGATGCCCCAAATA+TGG | - | tig0024490:21802-21821 | Msa1417520:intron | 40.0% | |
| TGGATGTACATTAGCACGAT+TGG | - | tig0024490:21822-21841 | Msa1417520:intron | 40.0% | |
| !! | GAAAAAACTCTGAGGCATTG+AGG | - | tig0024490:21898-21917 | Msa1417520:intron | 40.0% |
| AACATGGTGTATGGGGAAAT+TGG | + | tig0024490:21927-21946 | None:intergenic | 40.0% | |
| ACAATGGAACATGGTGTATG+GGG | + | tig0024490:21934-21953 | None:intergenic | 40.0% | |
| GACAATGGAACATGGTGTAT+GGG | + | tig0024490:21935-21954 | None:intergenic | 40.0% | |
| AGACAATGGAACATGGTGTA+TGG | + | tig0024490:21936-21955 | None:intergenic | 40.0% | |
| AGCAAGAAGACAATGGAACA+TGG | + | tig0024490:21943-21962 | None:intergenic | 40.0% | |
| TGTTCCATTGTCTTCTTGCT+TGG | - | tig0024490:21943-21962 | Msa1417520:intron | 40.0% | |
| ACCGGAGAAAGAACTAACAT+TGG | + | tig0024490:21999-22018 | None:intergenic | 40.0% | |
| CACATGAGATTGAAATGGAG+AGG | + | tig0024490:22070-22089 | None:intergenic | 40.0% | |
| ! | GGCTTCTAGAAATTGTTCCA+TGG | + | tig0024490:22284-22303 | None:intergenic | 40.0% |
| TCTCTCCACTTACAACAACT+AGG | - | tig0024490:22333-22352 | Msa1417520:intron | 40.0% | |
| TCTGTCCTAGTTGTTGTAAG+TGG | + | tig0024490:22341-22360 | None:intergenic | 40.0% | |
| GACAGATGAAAATTCTAGCG+CGG | - | tig0024490:22355-22374 | Msa1417520:intron | 40.0% | |
| ACAGATGAAAATTCTAGCGC+GGG | - | tig0024490:22356-22375 | Msa1417520:intron | 40.0% | |
| TTATGGGCACGACATGTTTA+AGG | - | tig0024490:22388-22407 | Msa1417520:intron | 40.0% | |
| ! | CTTGAAAGAAACCCACGTTT+TGG | - | tig0024490:23283-23302 | Msa1417520:intron | 40.0% |
| TCATCCAAACATCCATGAGA+AGG | - | tig0024490:23340-23359 | Msa1417520:intron | 40.0% | |
| TCAACCTTCTCATGGATGTT+TGG | + | tig0024490:23347-23366 | None:intergenic | 40.0% | |
| CATCCATGAGAAGGTTGAAA+TGG | - | tig0024490:23349-23368 | Msa1417520:intron | 40.0% | |
| ATGGCGTTTGAGAGTGAAAA+CGG | - | tig0024490:23368-23387 | Msa1417520:intron | 40.0% | |
| TTGCAAACGTATAGCCAAAC+AGG | - | tig0024490:23402-23421 | Msa1417520:intron | 40.0% | |
| ! | TTTAGTTCACTGTGCATTGG+AGG | - | tig0024490:23989-24008 | Msa1417520:intron | 40.0% |
| CAAAACCTAGTTCGTGGATT+AGG | - | tig0024490:24077-24096 | Msa1417520:intron | 40.0% | |
| AGAATCCTAATCCACGAACT+AGG | + | tig0024490:24085-24104 | None:intergenic | 40.0% | |
| CCGATATATGTATTGCAGAC+GGG | + | tig0024490:24458-24477 | None:intergenic | 40.0% | |
| CCCGTCTGCAATACATATAT+CGG | - | tig0024490:24455-24474 | Msa1417520:intron | 40.0% | |
| CCCGATATATGTATTGCAGA+CGG | + | tig0024490:24459-24478 | None:intergenic | 40.0% | |
| CCGTCTGCAATACATATATC+GGG | - | tig0024490:24456-24475 | Msa1417520:intron | 40.0% | |
| CGACATTGATGTTGTTGGAT+AGG | + | tig0024490:24546-24565 | None:intergenic | 40.0% | |
| TGTTCCGACATTGATGTTGT+TGG | + | tig0024490:24551-24570 | None:intergenic | 40.0% | |
| AACAACATCAATGTCGGAAC+AGG | - | tig0024490:24550-24569 | Msa1417520:CDS | 40.0% | |
| !! | CAATATTGTACAGCACTGGT+TGG | - | tig0024490:24615-24634 | Msa1417520:CDS | 40.0% |
| !!! | ACAGCACTGGTTGGTTTTTT+TGG | - | tig0024490:24624-24643 | Msa1417520:CDS | 40.0% |
| GTGCATTACTAATGCTGTAC+AGG | + | tig0024490:24975-24994 | None:intergenic | 40.0% | |
| ATGCACACTAAAAGCTTGTG+TGG | - | tig0024490:24989-25008 | Msa1417520:CDS | 40.0% | |
| ACACTAAAAGCTTGTGTGGT+TGG | - | tig0024490:24993-25012 | Msa1417520:CDS | 40.0% | |
| GAATCAAGAGTTGACACTGA+AGG | - | tig0024490:25063-25082 | Msa1417520:CDS | 40.0% | |
| ! | GTTTAGGGTTATAGCGTCTC+AGG | - | tig0024490:19058-19077 | Msa1417520:intron | 45.0% |
| ! | CTCTCTGGTGTCAATTTAGG+TGG | - | tig0024490:19088-19107 | Msa1417520:intron | 45.0% |
| CTCAGAAATTTGTCCGTGCT+TGG | + | tig0024490:19399-19418 | None:intergenic | 45.0% | |
| !! | ACAAGAGAAAGCATCGGAGT+AGG | - | tig0024490:19459-19478 | Msa1417520:intron | 45.0% |
| !! | CAAGAGAAAGCATCGGAGTA+GGG | - | tig0024490:19460-19479 | Msa1417520:intron | 45.0% |
| !! | TGAGTTTTGTGCGTCTCAAC+TGG | - | tig0024490:19538-19557 | Msa1417520:intron | 45.0% |
| TCAAGCTTAATGAGCCAGTG+TGG | - | tig0024490:20165-20184 | Msa1417520:intron | 45.0% | |
| ! | TAGGTGACGGTAAGTACAAG+TGG | + | tig0024490:20598-20617 | None:intergenic | 45.0% |
| CATATGCATGGTTACTCCTC+AGG | + | tig0024490:20782-20801 | None:intergenic | 45.0% | |
| AACCATGCATATGAACCTGC+AGG | - | tig0024490:20789-20808 | Msa1417520:intron | 45.0% | |
| TGCAACTACTGTCTACTGTC+AGG | + | tig0024490:20935-20954 | None:intergenic | 45.0% | |
| CATGGAGAGCTCATTGAGTT+TGG | + | tig0024490:21263-21282 | None:intergenic | 45.0% | |
| GCGTTGAATGTCCTGTAGTA+TGG | + | tig0024490:21348-21367 | None:intergenic | 45.0% | |
| TCCATTGTCTTCTTGCTTGG+AGG | - | tig0024490:21946-21965 | Msa1417520:intron | 45.0% | |
| ACCTCCAAGCAAGAAGACAA+TGG | + | tig0024490:21950-21969 | None:intergenic | 45.0% | |
| TCTTGCTTGGAGGTAGTTCT+TGG | - | tig0024490:21956-21975 | Msa1417520:intron | 45.0% | |
| AAGCCGACGATATGAATGCT+TGG | - | tig0024490:22299-22318 | Msa1417520:intron | 45.0% | |
| AGCCGACGATATGAATGCTT+GGG | - | tig0024490:22300-22319 | Msa1417520:intron | 45.0% | |
| CACCCAAGCATTCATATCGT+CGG | + | tig0024490:22305-22324 | None:intergenic | 45.0% | |
| GACGATATGAATGCTTGGGT+GGG | - | tig0024490:22304-22323 | Msa1417520:intron | 45.0% | |
| ATATGAATGCTTGGGTGGGT+TGG | - | tig0024490:22308-22327 | Msa1417520:intron | 45.0% | |
| CAGATGAAAATTCTAGCGCG+GGG | - | tig0024490:22357-22376 | Msa1417520:intron | 45.0% | |
| AAGAAACAACAACTGGGCAC+TGG | + | tig0024490:23006-23025 | None:intergenic | 45.0% | |
| ! | AGCAACAGAGAATCGATTCC+AGG | + | tig0024490:23243-23262 | None:intergenic | 45.0% |
| ! | TTGGGTCAGATCCACGTTTT+AGG | - | tig0024490:23302-23321 | Msa1417520:intron | 45.0% |
| ! | TGGGTCAGATCCACGTTTTA+GGG | - | tig0024490:23303-23322 | Msa1417520:intron | 45.0% |
| ACGCCATTTCAACCTTCTCA+TGG | + | tig0024490:23355-23374 | None:intergenic | 45.0% | |
| TGGCGTTTGAGAGTGAAAAC+GGG | - | tig0024490:23369-23388 | Msa1417520:intron | 45.0% | |
| !! | TGAGAGTGAAAACGGGCTTT+TGG | - | tig0024490:23376-23395 | Msa1417520:intron | 45.0% |
| !! | GAGAGTGAAAACGGGCTTTT+GGG | - | tig0024490:23377-23396 | Msa1417520:intron | 45.0% |
| !! | AGAGTGAAAACGGGCTTTTG+GGG | - | tig0024490:23378-23397 | Msa1417520:intron | 45.0% |
| TACCAATGGCGTTGCTTCTA+CGG | + | tig0024490:23514-23533 | None:intergenic | 45.0% | |
| GTCTTGCAAAACCTAGTTCG+TGG | - | tig0024490:24071-24090 | Msa1417520:intron | 45.0% | |
| GGGAACGAAATATTGGCCAA+AGG | + | tig0024490:24438-24457 | None:intergenic | 45.0% | |
| TGCAGACGGGAACGAAATAT+TGG | + | tig0024490:24445-24464 | None:intergenic | 45.0% | |
| TAAAAGCTTGTGTGGTTGGC+TGG | - | tig0024490:24997-25016 | Msa1417520:CDS | 45.0% | |
| GTTGACACTGAAGGAGCAAT+TGG | - | tig0024490:25072-25091 | Msa1417520:CDS | 45.0% | |
| !! | CATAATAATATTATATAAAA+AGG | + | tig0024490:20128-20147 | None:intergenic | 5.0% |
| !! | TTTATGAAATAAAAAAAAAT+TGG | + | tig0024490:20282-20301 | None:intergenic | 5.0% |
| !!! | ATAAATTTTTAAATATTCTA+TGG | - | tig0024490:20297-20316 | Msa1417520:intron | 5.0% |
| !! | ATAAATTAATGTTAAAAAAA+GGG | + | tig0024490:22760-22779 | None:intergenic | 5.0% |
| !! | AATAAATTAATGTTAAAAAA+AGG | + | tig0024490:22761-22780 | None:intergenic | 5.0% |
| GTCTCAGGTTCGATTCTCTC+TGG | - | tig0024490:19073-19092 | Msa1417520:intron | 50.0% | |
| GGTTTCAGAACAGACGTGCT+AGG | - | tig0024490:19435-19454 | Msa1417520:intron | 50.0% | |
| TGAATCAGAAGTGGAGACCG+AGG | - | tig0024490:19490-19509 | Msa1417520:intron | 50.0% | |
| !!! | GCGTCTCAACTGGCTTTTGA+TGG | - | tig0024490:19548-19567 | Msa1417520:intron | 50.0% |
| CTCCTGCAGGTTCATATGCA+TGG | + | tig0024490:20794-20813 | None:intergenic | 50.0% | |
| TCTGTGTTGTGTTCTCCTGC+AGG | + | tig0024490:20807-20826 | None:intergenic | 50.0% | |
| GCAGGAGAACACAACACAGA+AGG | - | tig0024490:20807-20826 | Msa1417520:intron | 50.0% | |
| GCTGCCGTGTACTTCAAGAA+AGG | - | tig0024490:21739-21758 | Msa1417520:intron | 50.0% | |
| CAGCTTATGAGTGCACACAC+CGG | + | tig0024490:22017-22036 | None:intergenic | 50.0% | |
| CATTACTCAAGCGCCAACCA+TGG | - | tig0024490:22264-22283 | Msa1417520:intron | 50.0% | |
| CGACGATATGAATGCTTGGG+TGG | - | tig0024490:22303-22322 | Msa1417520:intron | 50.0% | |
| GTGTGTGTTTGGTATAGCGG+TGG | - | tig0024490:22462-22481 | Msa1417520:intron | 50.0% | |
| GTGGATCTGACCCAAAACGT+GGG | + | tig0024490:23297-23316 | None:intergenic | 50.0% | |
| ATTGCCTCGTTGTCCGTAGA+AGG | - | tig0024490:23450-23469 | Msa1417520:intron | 50.0% | |
| AGCGCAAGTCATCTACTGAC+AGG | - | tig0024490:23945-23964 | Msa1417520:intron | 50.0% | |
| TTCACTGTGCATTGGAGGAG+TGG | - | tig0024490:23994-24013 | Msa1417520:intron | 50.0% | |
| TGCCAACATGGTCTGACCTT+TGG | - | tig0024490:24419-24438 | Msa1417520:intron | 50.0% | |
| TGTCAGCTCAGCGAAGTAAG+TGG | - | tig0024490:24692-24711 | Msa1417520:CDS | 50.0% | |
| GTCAGCTCAGCGAAGTAAGT+GGG | - | tig0024490:24693-24712 | Msa1417520:CDS | 50.0% | |
| TGAGACGGAGTCTCCAAGCA+AGG | - | tig0024490:19343-19362 | Msa1417520:intron | 55.0% | |
| ACTCGCAGAAACGACGCACA+TGG | + | tig0024490:22122-22141 | None:intergenic | 55.0% | |
| TGCGTCGTTTCTGCGAGTGT+TGG | - | tig0024490:22124-22143 | Msa1417520:intron | 55.0% | |
| ! | ATTGCAGTGCAGGTTGGCGT+TGG | + | tig0024490:23039-23058 | None:intergenic | 55.0% |
| AACGCCAACCTGCACTGCAA+TGG | - | tig0024490:23038-23057 | Msa1417520:intron | 55.0% | |
| ACGCCAACCTGCACTGCAAT+GGG | - | tig0024490:23039-23058 | Msa1417520:intron | 55.0% | |
| CGTGGATCTGACCCAAAACG+TGG | + | tig0024490:23298-23317 | None:intergenic | 55.0% | |
| AGTGCCTTCTACGGACAACG+AGG | + | tig0024490:23457-23476 | None:intergenic | 55.0% | |
| CGTTGCTTCTACGGACAACG+AGG | + | tig0024490:23505-23524 | None:intergenic | 55.0% | |
| GTCCGTAGAAGCAACGCCAT+TGG | - | tig0024490:23509-23528 | Msa1417520:intron | 55.0% | |
| GCATTGGAGGAGTGGTGACA+TGG | - | tig0024490:24002-24021 | Msa1417520:intron | 55.0% | |
| AGGAGTGGTGACATGGCAAG+TGG | - | tig0024490:24009-24028 | Msa1417520:intron | 55.0% | |
| GGAGTGGTGACATGGCAAGT+GGG | - | tig0024490:24010-24029 | Msa1417520:intron | 55.0% | |
| GGCCAAAGGTCAGACCATGT+TGG | + | tig0024490:24424-24443 | None:intergenic | 55.0% | |
| AAAATTCTAGCGCGGGGCGC+AGG | - | tig0024490:22363-22382 | Msa1417520:intron | 60.0% | |
| !! | TGCAGGTTGGCGTTGGCTGT+AGG | + | tig0024490:23032-23051 | None:intergenic | 60.0% |
| CGCCAACCTGCACTGCAATG+GGG | - | tig0024490:23040-23059 | Msa1417520:intron | 60.0% | |
| CACCCCATTGCAGTGCAGGT+TGG | + | tig0024490:23045-23064 | None:intergenic | 60.0% | |
| ACCTGCACTGCAATGGGGTG+CGG | - | tig0024490:23045-23064 | Msa1417520:intron | 60.0% | |
| ! | AGCGCGGGGCGCAGGTTTTA+TGG | - | tig0024490:22371-22390 | Msa1417520:intron | 65.0% |
| !! | GCGCGGGGCGCAGGTTTTAT+GGG | - | tig0024490:22372-22391 | Msa1417520:intron | 65.0% |
| GCCGCACCCCATTGCAGTGC+AGG | + | tig0024490:23049-23068 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024490 | gene | 18888 | 25150 | 18888 | ID=Msa1417520;Name=Msa1417520 |
| tig0024490 | mRNA | 18888 | 25150 | 18888 | ID=Msa1417520-mRNA-1;Parent=Msa1417520;Name=Msa1417520-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0|0|1|1|1|3|0|210 |
| tig0024490 | exon | 24985 | 25150 | 24985 | ID=Msa1417520-mRNA-1:exon:23533;Parent=Msa1417520-mRNA-1 |
| tig0024490 | exon | 24469 | 24765 | 24469 | ID=Msa1417520-mRNA-1:exon:23532;Parent=Msa1417520-mRNA-1 |
| tig0024490 | exon | 18888 | 19057 | 18888 | ID=Msa1417520-mRNA-1:exon:23531;Parent=Msa1417520-mRNA-1 |
| tig0024490 | CDS | 24985 | 25150 | 24985 | ID=Msa1417520-mRNA-1:cds;Parent=Msa1417520-mRNA-1 |
| tig0024490 | CDS | 24469 | 24765 | 24469 | ID=Msa1417520-mRNA-1:cds;Parent=Msa1417520-mRNA-1 |
| tig0024490 | CDS | 18888 | 19057 | 18888 | ID=Msa1417520-mRNA-1:cds;Parent=Msa1417520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
