AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0342150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0342150 MtrunA17_Chr2g0322001 87.671 73 9 0 1 73 1 73 1.55e-40 140
Msa0342150 MtrunA17_Chr4g0025571 71.014 69 19 1 1 69 1 68 1.47e-27 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0342150 AT2G27230.2 64.286 56 19 1 1 56 1 55 3.52e-20 82.8
Msa0342150 AT2G27230.1 64.286 56 19 1 1 56 1 55 3.52e-20 82.8

Find 274 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGGAACGGGGTTTCTTTC+TGG 0.043954 2_4:+64076772 Msa0342150:three_prime_UTR
TTACAAATTTCTCCGCTTAA+AGG 0.138316 2_4:-64074758 None:intergenic
ATCTGTTGAAGCAAACTTAA+AGG 0.155305 2_4:-64075227 None:intergenic
TATGTCACTCGTTCGTCTTC+TGG 0.191823 2_4:+64077225 Msa0342150:three_prime_UTR
CTTGAACGATTTCGCTAAAA+AGG 0.199495 2_4:+64073813 Msa0342150:three_prime_UTR
TTTCAGTTGAGAAATGTTTA+AGG 0.199782 2_4:-64075011 None:intergenic
GATACAGATAATGGAGAATA+TGG 0.202350 2_4:+64074495 Msa0342150:intron
ACATGGTTTCTTCTAAAGTA+TGG 0.227857 2_4:+64077354 Msa0342150:three_prime_UTR
TTTCATACTATTACGCCTTC+TGG 0.229094 2_4:-64077318 None:intergenic
TGGTTTCAGCTTCTGCTTCT+TGG 0.242105 2_4:-64071330 None:intergenic
TTCGAAGAATGGAGGTAAAA+TGG 0.247064 2_4:+64075819 Msa0342150:three_prime_UTR
GAAGAAAAGCATATGCTTAA+TGG 0.251784 2_4:-64076269 None:intergenic
CCTCATGGAGTTGTTCAAAT+TGG 0.255390 2_4:+64074128 Msa0342150:three_prime_UTR
TGCAGAAAATAAGGTTAAAA+AGG 0.263551 2_4:+64075534 Msa0342150:three_prime_UTR
GACTTGACAGGCTATTGATT+TGG 0.275588 2_4:+64073444 Msa0342150:intron
CTCCCGTCCCCGTTCGGATT+TGG 0.276751 2_4:-64073533 None:intergenic
AATTCAGATCTTGCATTATA+AGG 0.277652 2_4:-64074854 None:intergenic
GCATTAATTTCCCTTCAAAA+TGG 0.279606 2_4:-64077506 None:intergenic
GGATGGAGTGTTTGAACATT+AGG 0.289307 2_4:-64074737 None:intergenic
TGAATCATTTGGCGATCTTT+AGG 0.293664 2_4:-64076066 None:intergenic
GCACAAGCTTCTTCATGTTT+AGG 0.295071 2_4:-64075397 None:intergenic
CCTTCTCCTCATGACATTGT+TGG 0.299044 2_4:+64073497 Msa0342150:CDS
AATCTCACAATGACAAAATC+TGG 0.304426 2_4:+64076848 Msa0342150:three_prime_UTR
GGAGGATAAAGTCTCTTCTT+TGG 0.321759 2_4:+64073600 Msa0342150:three_prime_UTR
AGATGGCAATGCAGAAAATA+AGG 0.330319 2_4:+64075525 Msa0342150:three_prime_UTR
CAAGTCCAATCTGAGATTTC+AGG 0.333847 2_4:+64077420 Msa0342150:three_prime_UTR
GCTGACTTAATAAGAGGATT+AGG 0.334171 2_4:+64076800 Msa0342150:three_prime_UTR
CAGAATAGTCTTTGGATAGA+AGG 0.341700 2_4:-64074573 None:intergenic
CTTTCTAACGAACGACTTGA+TGG 0.342724 2_4:+64074601 Msa0342150:three_prime_UTR
TTCAAATCTTCAACTATAAT+AGG 0.343311 2_4:-64076629 None:intergenic
AGCAGTACTTCATTACTTAG+AGG 0.348030 2_4:+64075073 Msa0342150:three_prime_UTR
TCTGAATTCAACAACTTTGC+CGG 0.349536 2_4:+64074869 Msa0342150:three_prime_UTR
TGACACGATCTTGAATCATT+TGG 0.349626 2_4:-64076077 None:intergenic
CCTGCATTCCAGCTGAAAAT+TGG 0.350465 2_4:-64073998 None:intergenic
GGTTTAATTTCCAGGCAAAC+AGG 0.350767 2_4:+64077179 Msa0342150:intron
ATGCTTGTAGAGAGACAAAA+TGG 0.350886 2_4:-64071484 None:intergenic
CTCTCTAGAATTTCTTCAGC+TGG 0.350929 2_4:+64071575 Msa0342150:five_prime_UTR
TATGCTGTGTTCTGGAAGAT+TGG 0.358814 2_4:+64071912 Msa0342150:CDS
TGATTGTAGCCTAAAATATA+TGG 0.361806 2_4:+64074922 Msa0342150:three_prime_UTR
AAGTTTGGCAGAATAGTCTT+TGG 0.362772 2_4:-64074581 None:intergenic
ACTTGACAGGCTATTGATTT+GGG 0.364100 2_4:+64073445 Msa0342150:intron
TAAATCACAACACCAACTTC+TGG 0.364944 2_4:-64077712 None:intergenic
TTGAGACCACCGCATCTAAT+AGG 0.365764 2_4:-64075657 None:intergenic
AAGCAATCGCGGACAAAACC+TGG 0.366355 2_4:-64075334 None:intergenic
CTTCTCCTCATGACATTGTT+GGG 0.369610 2_4:+64073498 Msa0342150:CDS
GCCGTGTGGTAGTTAGGATT+TGG 0.370320 2_4:+64071675 Msa0342150:five_prime_UTR
TTTCAACAGAAAACCCATCT+TGG 0.370895 2_4:-64071847 None:intergenic
GAAACAAAACGGGGAGTCTA+AGG 0.371559 2_4:+64076321 Msa0342150:three_prime_UTR
ACAGATGCTCTGCGAGGAAC+GGG 0.371901 2_4:+64076760 Msa0342150:intron
TTCATACTATTACGCCTTCT+GGG 0.372258 2_4:-64077317 None:intergenic
TACTGCTAGAACTCAGATTA+TGG 0.373318 2_4:-64075057 None:intergenic
AAGTCGTTCGTTAGAAAGTT+TGG 0.380967 2_4:-64074596 None:intergenic
GGTCATGCCGTGTGGTAGTT+AGG 0.386505 2_4:+64071669 Msa0342150:five_prime_UTR
GATAAACTATGACATGCTTC+AGG 0.402098 2_4:+64075255 Msa0342150:three_prime_UTR
CTTGATGGACCTTCTACTTC+CGG 0.402994 2_4:+64074616 Msa0342150:three_prime_UTR
CAGCAAAATTTATCTGTAGC+TGG 0.404020 2_4:+64074947 Msa0342150:three_prime_UTR
AAAAGGAAACATGTCAGAAC+AGG 0.404985 2_4:+64075551 Msa0342150:three_prime_UTR
AGAATTTCTTCAGCTGGAAA+TGG 0.405706 2_4:+64071581 Msa0342150:five_prime_UTR
CGCAGCATGAGATGAATAAC+TGG 0.412065 2_4:-64074711 None:intergenic
AAATTAGCTGCAGATACTTT+CGG 0.415204 2_4:-64075160 None:intergenic
TCGAAGAATGGAGGTAAAAT+GGG 0.415300 2_4:+64075820 Msa0342150:three_prime_UTR
GTCTTTGGATAGAAGGGCAT+TGG 0.416057 2_4:-64074566 None:intergenic
TTAGATTTGCAAACTTCATC+CGG 0.418152 2_4:-64076003 None:intergenic
CATGAAAATAGTGTTTCAAC+TGG 0.418499 2_4:+64075967 Msa0342150:three_prime_UTR
TTGACCAAACGGCGCAGAAC+CGG 0.424878 2_4:-64074888 None:intergenic
CGCTGTCATCATAGATTGAA+TGG 0.431106 2_4:-64075371 None:intergenic
GCGATCTTTAGGTCGAGGCC+TGG 0.431725 2_4:-64076055 None:intergenic
CGAGGCCTGGGATTCTCTCC+TGG 0.433177 2_4:-64076042 None:intergenic
CTGTAGAAACTAGTTCTCTA+AGG 0.434757 2_4:+64075845 Msa0342150:three_prime_UTR
CTTCTTGGTGAGTGTGGAAG+TGG 0.435537 2_4:-64071315 None:intergenic
GTATCTGCAGCTAATTTATC+CGG 0.438414 2_4:+64075166 Msa0342150:three_prime_UTR
AATGGTCTTATGCTGTGTTC+TGG 0.439007 2_4:+64071904 Msa0342150:CDS
CTTATAATGTATGATGTTGT+TGG 0.443653 2_4:+64077612 Msa0342150:three_prime_UTR
CGATCTTTAGGTCGAGGCCT+GGG 0.444284 2_4:-64076054 None:intergenic
AAACAACTCCCGTCCCCGTT+CGG 0.444864 2_4:-64073539 None:intergenic
GTTATTCCTGTGCTTCCTCA+TGG 0.445486 2_4:+64074113 Msa0342150:three_prime_UTR
CGAATTTGCCAAATCCGAAC+GGG 0.446500 2_4:+64073525 Msa0342150:CDS
TGCCAAATCCGAACGGGGAC+GGG 0.446546 2_4:+64073531 Msa0342150:CDS
TTTGCCGGTTCTGCGCCGTT+TGG 0.447116 2_4:+64074884 Msa0342150:three_prime_UTR
AATAATCTAGTCATTGTTGC+AGG 0.447908 2_4:+64073640 Msa0342150:three_prime_UTR
CAAAATTACTGGACATAACC+TGG 0.451981 2_4:-64075777 None:intergenic
CCGACAAGCTGAAACAAAAC+GGG 0.452238 2_4:+64076311 Msa0342150:three_prime_UTR
GAAGGCGTAATAGTATGAAA+TGG 0.456647 2_4:+64077321 Msa0342150:three_prime_UTR
TAGATAGATATTGAAGGGTA+TGG 0.457628 2_4:+64077746 Msa0342150:three_prime_UTR
TTGCGAGAAATTGTTCCAAA+TGG 0.459635 2_4:+64076105 Msa0342150:three_prime_UTR
CTTTGAAGACTTTGTGTGGT+AGG 0.460879 2_4:+64071874 Msa0342150:CDS
GAAATAGCTGACTTAATAAG+AGG 0.461322 2_4:+64076794 Msa0342150:three_prime_UTR
CTTAGTTCGTGGTTGGAGAA+TGG 0.461994 2_4:+64075931 Msa0342150:three_prime_UTR
CTATTCAGCACATGCTCCTC+GGG 0.463051 2_4:-64075301 None:intergenic
TAATAGGACAGACCATTGAT+TGG 0.464665 2_4:-64076613 None:intergenic
CGGCATGCTTTGTCACACTT+TGG 0.464677 2_4:-64076291 None:intergenic
ATGAATGTGTGAGAATGAAA+TGG 0.464940 2_4:-64071427 None:intergenic
TTCATTCCCAACTTGTGCTC+CGG 0.464972 2_4:-64075185 None:intergenic
TACACCCGAGCTGCAAGATC+AGG 0.467529 2_4:-64074540 None:intergenic
TAGAAGAGCAACAAAAGAAA+AGG 0.469343 2_4:-64077804 None:intergenic
TTTGCAAATCTAATCGCAAA+AGG 0.469963 2_4:+64076013 Msa0342150:three_prime_UTR
GCCGACAAGCTGAAACAAAA+CGG 0.470331 2_4:+64076310 Msa0342150:three_prime_UTR
AGAGCCTGATCTTGCAGCTC+GGG 0.470368 2_4:+64074536 Msa0342150:three_prime_UTR
ATGAGGAGAAGGACAAGAAA+AGG 0.471607 2_4:-64073486 None:intergenic
CTCTCAACTTAGTTCGTGGT+TGG 0.472291 2_4:+64075924 Msa0342150:three_prime_UTR
AGGGGCTACATGGGCATATG+AGG 0.472884 2_4:+64076583 Msa0342150:three_prime_UTR
AATTTATCCGGAGCACAAGT+TGG 0.476179 2_4:+64075178 Msa0342150:three_prime_UTR
AAATATGTAGATTATTAGTA+AGG 0.476655 2_4:+64076526 Msa0342150:intron
CTCAGTTAATGAATCAATGT+TGG 0.477527 2_4:+64075600 Msa0342150:three_prime_UTR
GAGAATGAAATGGAACTTGA+TGG 0.478547 2_4:-64071417 None:intergenic
TGTGCTCAACAACCTCCATC+AGG 0.482072 2_4:+64075415 Msa0342150:three_prime_UTR
CTAGTCATTGTTGCAGGTGA+AGG 0.483141 2_4:+64073646 Msa0342150:three_prime_UTR
CTTCTGCTTCTTGGTGAGTG+TGG 0.483653 2_4:-64071321 None:intergenic
CACTCAAGTGCTTCTGAAGA+GGG 0.484825 2_4:-64071100 None:intergenic
ACTTCGAGGGAGGGGCTACA+TGG 0.485251 2_4:+64076573 Msa0342150:three_prime_UTR
TAGGCTACAATCACTTTGAC+CGG 0.485287 2_4:-64074912 None:intergenic
GACTTTCAATCGCCTCATCT+AGG 0.486947 2_4:+64073568 Msa0342150:CDS
TTAAACCAGGAGAGAATCCC+AGG 0.487794 2_4:+64076037 Msa0342150:three_prime_UTR
TCTTTGGATAGAAGGGCATT+GGG 0.488427 2_4:-64074565 None:intergenic
TCTTGCAGAACAACATTGAC+GGG 0.491625 2_4:+64075718 Msa0342150:three_prime_UTR
TTATTCATTCCACCATGTAC+CGG 0.494944 2_4:-64075100 None:intergenic
TCTGCGCCGTTTGGTCAATC+CGG 0.495707 2_4:+64074893 Msa0342150:three_prime_UTR
ATTTATCCGGAGCACAAGTT+GGG 0.496673 2_4:+64075179 Msa0342150:three_prime_UTR
TTCTTTCTGACTCCCGACAC+TGG 0.499570 2_4:+64071069 Msa0342150:five_prime_UTR
GAAGGCACACCGGAAGTAGA+AGG 0.502426 2_4:-64074625 None:intergenic
CCCAAATTTAATGTCATCCT+CGG 0.506080 2_4:+64071209 Msa0342150:intron
GTGGCTCTCAACTTAGTTCG+TGG 0.508052 2_4:+64075920 Msa0342150:three_prime_UTR
CAACATGGTATCAACTGCAT+TGG 0.508385 2_4:-64077278 None:intergenic
TGGCATGCTGAAACTGAACT+TGG 0.510012 2_4:+64071601 Msa0342150:five_prime_UTR
GAAAGACAACTTCGAGGGAG+GGG 0.510207 2_4:+64076565 Msa0342150:three_prime_UTR
TATTAGTAAGGAAGGTGGGC+TGG 0.512994 2_4:+64076538 Msa0342150:three_prime_UTR
ACAGACAGAAGCCTCAGCTT+CGG 0.514419 2_4:+64075034 Msa0342150:three_prime_UTR
AGGGGTTATGAACCAGTGTC+GGG 0.516685 2_4:-64071081 None:intergenic
GTGTAGCATAGATGCACTGC+TGG 0.518476 2_4:+64076240 Msa0342150:intron
GAAACTAGTTCTCTAAGGTC+TGG 0.518621 2_4:+64075850 Msa0342150:three_prime_UTR
GAAATGGATCACTTGTTACA+TGG 0.518940 2_4:+64077337 Msa0342150:three_prime_UTR
GTGTGGTTAGAGAAAGAGGA+AGG 0.518965 2_4:-64071246 None:intergenic
TCTTCTGGAGCAAACGATGA+AGG 0.520773 2_4:+64077240 Msa0342150:three_prime_UTR
CCACACCTAAAATATCAAAC+AGG 0.521298 2_4:-64075447 None:intergenic
ATGTAGATTATTAGTAAGGA+AGG 0.521838 2_4:+64076530 Msa0342150:intron
GCATAGATGCACTGCTGGAA+CGG 0.522741 2_4:+64076245 Msa0342150:three_prime_UTR
GAGAACACAACAAGCAGGAG+AGG 0.523220 2_4:+64071646 Msa0342150:five_prime_UTR
CAGGTTTGAATCAAAATTTG+AGG 0.523488 2_4:-64074816 None:intergenic
AATAGGACAGACCATTGATT+GGG 0.524595 2_4:-64076612 None:intergenic
CTGGGCACGTTTCATTGTTG+AGG 0.525236 2_4:+64076867 Msa0342150:three_prime_UTR
CTTTGACCGGATTGACCAAA+CGG 0.526516 2_4:-64074899 None:intergenic
TTGCCAAATCCGAACGGGGA+CGG 0.527063 2_4:+64073530 Msa0342150:CDS
ATCTTGCAGAACAACATTGA+CGG 0.527236 2_4:+64075717 Msa0342150:three_prime_UTR
ATTTGGCGATCTTTAGGTCG+AGG 0.527631 2_4:-64076060 None:intergenic
AGCAAAATTTATCTGTAGCT+GGG 0.527889 2_4:+64074948 Msa0342150:three_prime_UTR
ATGTCAGAACAGGGAGGCTA+CGG 0.528271 2_4:+64075561 Msa0342150:three_prime_UTR
AAATTTCTCCGCTTAAAGGA+TGG 0.529927 2_4:-64074754 None:intergenic
TTCATTACTTAGAGGAATCC+CGG 0.530213 2_4:+64075081 Msa0342150:three_prime_UTR
TCCACTCCTTCAGTAGTCAA+TGG 0.531809 2_4:+64074679 Msa0342150:three_prime_UTR
CTTCGAGGGAGGGGCTACAT+GGG 0.531903 2_4:+64076574 Msa0342150:three_prime_UTR
ACAAACTTCTGAAAGGCCAC+TGG 0.533098 2_4:+64075479 Msa0342150:three_prime_UTR
AATGTAATGTAACACTTCCA+AGG 0.533568 2_4:-64077838 None:intergenic
CAAAGATTAAGAATATGTAT+TGG 0.534225 2_4:+64077549 Msa0342150:three_prime_UTR
CTGATGTATTACTCGACTCT+CGG 0.535979 2_4:+64077647 Msa0342150:three_prime_UTR
ACTCAGTATAATTGGACGCT+CGG 0.538400 2_4:+64073762 Msa0342150:intron
TCTCAGATTGGACTTGATGT+TGG 0.538444 2_4:-64077413 None:intergenic
TACAGATGCTCTGCGAGGAA+CGG 0.540617 2_4:+64076759 Msa0342150:intron
GATGTATAGATAGATATTGA+AGG 0.541631 2_4:+64077740 Msa0342150:three_prime_UTR
GCTACATGGGCATATGAGGT+TGG 0.541843 2_4:+64076587 Msa0342150:three_prime_UTR
TATTCATTCCACCATGTACC+GGG 0.541957 2_4:-64075099 None:intergenic
TCCCTCTCGTGTCTGTAACC+AGG 0.542916 2_4:+64075759 Msa0342150:three_prime_UTR
GACCGCCTGAAATCTCAGAT+TGG 0.544308 2_4:-64077425 None:intergenic
ACTATTCAGCACATGCTCCT+CGG 0.544373 2_4:-64075302 None:intergenic
TGAGTTGTGTTGTGTGTGTG+TGG 0.545771 2_4:-64071263 None:intergenic
GAGGGGTTATGAACCAGTGT+CGG 0.545932 2_4:-64071082 None:intergenic
ATACAGATAATGGAGAATAT+GGG 0.546525 2_4:+64074496 Msa0342150:intron
AACTGGATACTCTAAACGCC+CGG 0.547096 2_4:+64075984 Msa0342150:three_prime_UTR
TGAAAGACAACTTCGAGGGA+GGG 0.547552 2_4:+64076564 Msa0342150:three_prime_UTR
GTGTGTGTGGTTAGAGAAAG+AGG 0.547740 2_4:-64071250 None:intergenic
AGATTATTAGTAAGGAAGGT+GGG 0.548057 2_4:+64076534 Msa0342150:intron
TTATAACTCTTTACCCCAGA+AGG 0.550517 2_4:+64077303 Msa0342150:three_prime_UTR
AGAATAGTCTTTGGATAGAA+GGG 0.551317 2_4:-64074572 None:intergenic
TTGAAGGGAAATTAATGCGT+AGG 0.552017 2_4:+64077511 Msa0342150:three_prime_UTR
CTTAGAGGAATCCCGGTACA+TGG 0.555721 2_4:+64075088 Msa0342150:three_prime_UTR
CTTCTACTCATAGTTCACCT+TGG 0.555772 2_4:+64077821 Msa0342150:three_prime_UTR
ATGCTCCTCGGGATTAAAAG+AGG 0.559685 2_4:-64075290 None:intergenic
CTGAATAGTGGTCATATCCC+AGG 0.560458 2_4:+64075316 Msa0342150:three_prime_UTR
AGGTTTGAATCAAAATTTGA+GGG 0.560993 2_4:-64074815 None:intergenic
AAGAGCCTGATCTTGCAGCT+CGG 0.562421 2_4:+64074535 Msa0342150:three_prime_UTR
TCACTCAAGTGCTTCTGAAG+AGG 0.563735 2_4:-64071101 None:intergenic
TGAGGTTGGATCCCAATCAA+TGG 0.564102 2_4:+64076601 Msa0342150:three_prime_UTR
TGCTCCTCGGGATTAAAAGA+GGG 0.564320 2_4:-64075289 None:intergenic
TCAGATTATGGCCGAAGCTG+AGG 0.566634 2_4:-64075045 None:intergenic
TAGATTATTAGTAAGGAAGG+TGG 0.567992 2_4:+64076533 Msa0342150:intron
GAGGAGCATGTGCTGAATAG+TGG 0.569550 2_4:+64075304 Msa0342150:three_prime_UTR
GCCATTGACTACTGAAGGAG+TGG 0.569892 2_4:-64074680 None:intergenic
AGAACTTGCTTGAAAATGCA+TGG 0.571781 2_4:+64071720 Msa0342150:five_prime_UTR
GTGGAATGAATAATCTTCTG+AGG 0.573129 2_4:+64075110 Msa0342150:three_prime_UTR
TAGATTTGCAAACTTCATCC+GGG 0.573731 2_4:-64076002 None:intergenic
TTGAAGGGTATGGAAAGTAA+AGG 0.574260 2_4:+64077756 Msa0342150:three_prime_UTR
TATCAAACTACAACTGTATG+TGG 0.574384 2_4:+64075901 Msa0342150:three_prime_UTR
AACAGGTCATCACCACCTGA+TGG 0.575030 2_4:-64075430 None:intergenic
ATCTCACAATGACAAAATCT+GGG 0.576987 2_4:+64076849 Msa0342150:three_prime_UTR
AAATAGCTTCATACCTCAGG+TGG 0.577005 2_4:-64073841 None:intergenic
CTTCTGGAGCAAACGATGAA+GGG 0.580889 2_4:+64077241 Msa0342150:three_prime_UTR
GAGAATCCACTCATGACTGT+TGG 0.582691 2_4:-64073791 None:intergenic
TAGTCATTGTTGCAGGTGAA+GGG 0.582750 2_4:+64073647 Msa0342150:three_prime_UTR
TTGAAAGACAACTTCGAGGG+AGG 0.586923 2_4:+64076563 Msa0342150:three_prime_UTR
ACAGACACGAGAGGGAATAG+AGG 0.587810 2_4:-64075752 None:intergenic
CCAACAATGTCATGAGGAGA+AGG 0.588683 2_4:-64073497 None:intergenic
TCGAATTTGCCAAATCCGAA+CGG 0.589469 2_4:+64073524 Msa0342150:CDS
AAGTGTTGAGTACTTGAGAG+AGG 0.590234 2_4:-64071385 None:intergenic
GATTAGGCTTGACCATCTGA+AGG 0.592901 2_4:+64076816 Msa0342150:three_prime_UTR
TGAGGAGAAGGACAAGAAAA+GGG 0.594071 2_4:-64073485 None:intergenic
ATTAGATGCGGTGGTCTCAA+CGG 0.594503 2_4:+64075660 Msa0342150:three_prime_UTR
TCTAAGGTCTGGTTGTAGCA+AGG 0.595216 2_4:+64075861 Msa0342150:three_prime_UTR
GACTCTCGGATGACATGCAT+CGG 0.595528 2_4:+64077661 Msa0342150:three_prime_UTR
AGAATGAAATGGAACTTGAT+GGG 0.596533 2_4:-64071416 None:intergenic
AGAACACAACAAGCAGGAGA+GGG 0.598428 2_4:+64071647 Msa0342150:five_prime_UTR
TCCTCTTGAATTCCTAGATG+AGG 0.600129 2_4:-64073580 None:intergenic
ACAACTCCATGAGGAAGCAC+AGG 0.602503 2_4:-64074119 None:intergenic
TTAGAGCCATTGACTACTGA+AGG 0.602801 2_4:-64074685 None:intergenic
ACCTGGTTACAGACACGAGA+GGG 0.603391 2_4:-64075760 None:intergenic
CAAACACTCCATCCTTTAAG+CGG 0.606233 2_4:+64074746 Msa0342150:three_prime_UTR
TCATACTATTACGCCTTCTG+GGG 0.609124 2_4:-64077316 None:intergenic
ATGTATAGATAGATATTGAA+GGG 0.609844 2_4:+64077741 Msa0342150:three_prime_UTR
AAACAGGGACGTGACGAGGA+TGG 0.609914 2_4:+64077195 Msa0342150:three_prime_UTR
CATTTACCAACAGTCATGAG+TGG 0.611726 2_4:+64073785 Msa0342150:three_prime_UTR
TGTGGTTAGAGAAAGAGGAA+GGG 0.618008 2_4:-64071245 None:intergenic
AGCAATCGCGGACAAAACCT+GGG 0.620218 2_4:-64075333 None:intergenic
ATTGGACTTGATGTTGGTCA+TGG 0.621538 2_4:-64077407 None:intergenic
AAGTGTGGTTTGTATGTCAG+TGG 0.624005 2_4:+64077891 Msa0342150:three_prime_UTR
GTTTAATTTCCAGGCAAACA+GGG 0.624691 2_4:+64077180 Msa0342150:intron
AGGCAAACAGGGACGTGACG+AGG 0.625256 2_4:+64077191 Msa0342150:intron
TGTGTGGTAGGAATAATCAA+TGG 0.625885 2_4:+64071886 Msa0342150:CDS
ATTAGGCTTGACCATCTGAA+GGG 0.626411 2_4:+64076817 Msa0342150:three_prime_UTR
GAAGCTTTGAAGACTTTGTG+TGG 0.626478 2_4:+64071870 Msa0342150:CDS
CTCTACAAGCATGAATCTCG+TGG 0.628359 2_4:+64071495 Msa0342150:five_prime_UTR
GGGTTGAGAACACAACAAGC+AGG 0.628779 2_4:+64071641 Msa0342150:five_prime_UTR
AGACCACCTATTAGATGCGG+TGG 0.629292 2_4:+64075651 Msa0342150:three_prime_UTR
CAACATCATACATTATAAGT+CGG 0.631070 2_4:-64077608 None:intergenic
CAGCAAACAGTTCATTCCAG+TGG 0.634863 2_4:-64075495 None:intergenic
TGGAATGAATAATCTTCTGA+GGG 0.634877 2_4:+64075111 Msa0342150:three_prime_UTR
GCTCCTCGGGATTAAAAGAG+GGG 0.642751 2_4:-64075288 None:intergenic
TCTGGTTGTAGCAAGGATGA+TGG 0.643782 2_4:+64075868 Msa0342150:three_prime_UTR
GCCTCATCTAGGAATTCAAG+AGG 0.643855 2_4:+64073579 Msa0342150:exon
CTGTTTGCTGATGAATCAGA+TGG 0.644360 2_4:+64075508 Msa0342150:three_prime_UTR
TTAGGCTTGACCATCTGAAG+GGG 0.644639 2_4:+64076818 Msa0342150:three_prime_UTR
TGTTCTGCAAGATATGTCAT+CGG 0.646847 2_4:-64075707 None:intergenic
GAACTTGAAACATTAACACA+AGG 0.646884 2_4:-64074989 None:intergenic
AAAGGAAACATGTCAGAACA+GGG 0.651075 2_4:+64075552 Msa0342150:three_prime_UTR
AATCGCAAAAGGCTTAAACC+AGG 0.654235 2_4:+64076024 Msa0342150:three_prime_UTR
CAGATGCTCTGCGAGGAACG+GGG 0.654507 2_4:+64076761 Msa0342150:intron
TCCTCGTCAGATGCTAATCG+AGG 0.657027 2_4:+64076655 Msa0342150:three_prime_UTR
ATCAACAGACGAAGGCACAC+CGG 0.661430 2_4:-64074635 None:intergenic
ACTCAAGTGCTTCTGAAGAG+GGG 0.663368 2_4:-64071099 None:intergenic
AACTTGAAACATTAACACAA+GGG 0.669514 2_4:-64074988 None:intergenic
GACACGAGAGGGAATAGAGG+TGG 0.670577 2_4:-64075749 None:intergenic
GTCCAATCTGAGATTTCAGG+CGG 0.671742 2_4:+64077423 Msa0342150:three_prime_UTR
GACATCCCAACAATGTCATG+AGG 0.673648 2_4:-64073503 None:intergenic
AACAGACCACCTATTAGATG+CGG 0.674702 2_4:+64075648 Msa0342150:three_prime_UTR
AGACCACCGCATCTAATAGG+TGG 0.676745 2_4:-64075654 None:intergenic
GGTTGTAGCAAGGATGATGG+TGG 0.679696 2_4:+64075871 Msa0342150:three_prime_UTR
TAAAGAGTTATAACGCAACA+TGG 0.680308 2_4:-64077293 None:intergenic
AGGTCATCACCACCTGATGG+AGG 0.680497 2_4:-64075427 None:intergenic
CCAATTTGAACAACTCCATG+AGG 0.685991 2_4:-64074128 None:intergenic
TCATCTAGGAATTCAAGAGG+AGG 0.686619 2_4:+64073582 Msa0342150:exon
AATGAATCAATGTTGGACAG+TGG 0.691050 2_4:+64075607 Msa0342150:three_prime_UTR
GAATTTGCCAAATCCGAACG+GGG 0.691735 2_4:+64073526 Msa0342150:CDS
GAACACAACAAGCAGGAGAG+GGG 0.697694 2_4:+64071648 Msa0342150:five_prime_UTR
AGGAGAGGGGTCATGCCGTG+TGG 0.700864 2_4:+64071661 Msa0342150:five_prime_UTR
ACAGATGAATCAACAGACGA+AGG 0.702189 2_4:-64074643 None:intergenic
ATTCTTACAGATGCTCTGCG+AGG 0.703030 2_4:+64076754 Msa0342150:intron
TCCAAATCCTAACTACCACA+CGG 0.705300 2_4:-64071676 None:intergenic
GCTCAACAACCTCCATCAGG+TGG 0.707490 2_4:+64075418 Msa0342150:three_prime_UTR
AGAGGAATCCCGGTACATGG+TGG 0.708832 2_4:+64075091 Msa0342150:three_prime_UTR
CTTGCAGAACAACATTGACG+GGG 0.710281 2_4:+64075719 Msa0342150:three_prime_UTR
GTAAATGTAAGCTCTAAGTG+TGG 0.710396 2_4:+64077876 Msa0342150:three_prime_UTR
ACCTCGATTAGCATCTGACG+AGG 0.714015 2_4:-64076656 None:intergenic
GTATGTCAGTGGAATCAAAG+AGG 0.714666 2_4:+64077902 Msa0342150:three_prime_UTR
TAGGCTTGACCATCTGAAGG+GGG 0.717311 2_4:+64076819 Msa0342150:three_prime_UTR
CGACAAGCTGAAACAAAACG+GGG 0.733321 2_4:+64076312 Msa0342150:three_prime_UTR
AACCTGGTTACAGACACGAG+AGG 0.743583 2_4:-64075761 None:intergenic
GGAAACATGTCAGAACAGGG+AGG 0.777184 2_4:+64075555 Msa0342150:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTCTAATTTCTAATTAA+GGG + chr2_4:64072057-64072076 Msa0342150:intron 10.0%
!!! ATTTTCTTAAAAAAAAAATC+TGG - chr2_4:64076168-64076187 None:intergenic 10.0%
!! TATAGATATATAAAATTCTT+TGG + chr2_4:64076692-64076711 Msa0342150:intron 10.0%
!! TATAACATCAAATAATTTAA+GGG - chr2_4:64076967-64076986 None:intergenic 10.0%
!! ATATAACATCAAATAATTTA+AGG - chr2_4:64076968-64076987 None:intergenic 10.0%
!! GATATTCTAATTTCTAATTA+AGG + chr2_4:64072056-64072075 Msa0342150:intron 15.0%
!!! ATTTGATTTATATTCTTACT+TGG + chr2_4:64072808-64072827 Msa0342150:intron 15.0%
!! AAATAAATACTATAAGATTC+TGG - chr2_4:64072889-64072908 None:intergenic 15.0%
!!! TTTTTTAAAAGTGGAAAATA+AGG - chr2_4:64073038-64073057 None:intergenic 15.0%
!! AAATTTAAGAAGAAACTTAT+TGG - chr2_4:64073924-64073943 None:intergenic 15.0%
!! ATAAAACTTTAACAAAGAAA+AGG - chr2_4:64074173-64074192 None:intergenic 15.0%
!!! AATTTTAATGATACAGATAA+TGG + chr2_4:64074486-64074505 Msa0342150:intron 15.0%
!! AAATATGTAGATTATTAGTA+AGG + chr2_4:64076526-64076545 Msa0342150:intron 15.0%
!!! AACTTTTCTTATATATGAAA+TGG + chr2_4:64076992-64077011 Msa0342150:intron 15.0%
!!! TTTCAGTTTTGTATTTAATT+TGG + chr2_4:64077949-64077968 Msa0342150:three_prime_UTR 15.0%
!! TTGAAAAAAGATAAGAACTT+TGG - chr2_4:64071457-64071476 None:intergenic 20.0%
!!! AGTTCTTATCTTTTTTCAAA+TGG + chr2_4:64071458-64071477 Msa0342150:five_prime_UTR 20.0%
!! GAACAGAAAAAAAAACAAAA+GGG - chr2_4:64071765-64071784 None:intergenic 20.0%
!! AGAACAGAAAAAAAAACAAA+AGG - chr2_4:64071766-64071785 None:intergenic 20.0%
!!! AATTCTTTTTTCTCAGAAAA+TGG - chr2_4:64071807-64071826 None:intergenic 20.0%
!!! TTTTCTGAGAAAAAAGAATT+AGG + chr2_4:64071807-64071826 Msa0342150:five_prime_UTR 20.0%
!! CACAAAAAAGACAAAAAAAA+AGG - chr2_4:64071999-64072018 None:intergenic 20.0%
!! AAAACAACAAAGAAAGTAAA+CGG - chr2_4:64072128-64072147 None:intergenic 20.0%
!!! ATCAATTTTGACTTTTAAGT+CGG - chr2_4:64072359-64072378 None:intergenic 20.0%
!!! AAATTGATTTCAGTATGATT+TGG + chr2_4:64072371-64072390 Msa0342150:intron 20.0%
!!! AATTGATTTCAGTATGATTT+GGG + chr2_4:64072372-64072391 Msa0342150:intron 20.0%
!! TAGAAAATCAATTGAAACTT+TGG + chr2_4:64072611-64072630 Msa0342150:intron 20.0%
!! TACAAAATTTCTATTCACAT+TGG + chr2_4:64072705-64072724 Msa0342150:intron 20.0%
!! AAAATAAAAGATCAAAGCAA+AGG - chr2_4:64073186-64073205 None:intergenic 20.0%
!!! AATCAAGAAGTTAATTTTAC+TGG - chr2_4:64073403-64073422 None:intergenic 20.0%
!!! ATACTTTTATTATGCAAGTT+TGG + chr2_4:64074191-64074210 Msa0342150:intron 20.0%
!! TTTAAAAACAAACTTCTGAA+AGG + chr2_4:64075472-64075491 Msa0342150:three_prime_UTR 20.0%
!! TTCAAATCTTCAACTATAAT+AGG - chr2_4:64076632-64076651 None:intergenic 20.0%
!! TGCTAATAACATCAAAAATA+AGG - chr2_4:64077030-64077049 None:intergenic 20.0%
!! CAAAGATTAAGAATATGTAT+TGG + chr2_4:64077549-64077568 Msa0342150:three_prime_UTR 20.0%
!! ATGTATAGATAGATATTGAA+GGG + chr2_4:64077741-64077760 Msa0342150:three_prime_UTR 20.0%
!!! TTGTTTTGTTTTGCTATGTT+TGG - chr2_4:64071032-64071051 None:intergenic 25.0%
! TAATGTCGTGACATTAAATT+TGG + chr2_4:64071127-64071146 Msa0342150:intron 25.0%
!!! TTTGTGTTGCTTAAAAAAAC+AGG - chr2_4:64071358-64071377 None:intergenic 25.0%
! TTAAGGGTAATTACATGTTT+AGG + chr2_4:64072073-64072092 Msa0342150:intron 25.0%
! TAAGGGTAATTACATGTTTA+GGG + chr2_4:64072074-64072093 Msa0342150:intron 25.0%
! AAACAACAAAGAAAGTAAAC+GGG - chr2_4:64072127-64072146 None:intergenic 25.0%
!!! TCTTTGTTGTTTTGTTAATC+TGG + chr2_4:64072135-64072154 Msa0342150:intron 25.0%
! TTAGTCCAAATTAACTTTGA+TGG + chr2_4:64072194-64072213 Msa0342150:intron 25.0%
! ACATTCCATCAAAGTTAATT+TGG - chr2_4:64072202-64072221 None:intergenic 25.0%
! TGAAACTATAAGTGTATGTT+TGG + chr2_4:64072305-64072324 Msa0342150:intron 25.0%
!! ATTGATTTCAGTATGATTTG+GGG + chr2_4:64072373-64072392 Msa0342150:intron 25.0%
! AAGCAAAATCAATTCTAATC+AGG - chr2_4:64072401-64072420 None:intergenic 25.0%
! ATTTATGTTTCTCCTGAAAA+TGG - chr2_4:64072554-64072573 None:intergenic 25.0%
!! GTTTGGATTATCAATGATTT+TGG - chr2_4:64072650-64072669 None:intergenic 25.0%
!! CTTTCTTGTTTGATTCTATT+TGG + chr2_4:64073012-64073031 Msa0342150:intron 25.0%
!!! ACAACTCAGTTTTTTAAAAG+TGG - chr2_4:64073047-64073066 None:intergenic 25.0%
! TTGTGAGTTTGACAAAAATA+CGG - chr2_4:64073312-64073331 None:intergenic 25.0%
!!! TCCATTAGCTTTTTACTATA+CGG + chr2_4:64073364-64073383 Msa0342150:intron 25.0%
!!! TTGCTTTTACTCAGTATAAT+TGG + chr2_4:64073754-64073773 Msa0342150:intron 25.0%
!!! AATACTAGTTTGCTCTTTTT+AGG + chr2_4:64073956-64073975 Msa0342150:intron 25.0%
!! TTTTATTATGCAAGTTTGGT+TGG + chr2_4:64074195-64074214 Msa0342150:intron 25.0%
!! ATCTAGGATTATTCATGATT+TGG - chr2_4:64074336-64074355 None:intergenic 25.0%
!! ATTACCCAATCACAATATTT+TGG + chr2_4:64074374-64074393 Msa0342150:intron 25.0%
!!! ATACAGATAATGGAGAATAT+GGG + chr2_4:64074496-64074515 Msa0342150:intron 25.0%
!! GGAGAAATTTGTAATTTTCA+GGG + chr2_4:64074767-64074786 Msa0342150:three_prime_UTR 25.0%
! AGGTTTGAATCAAAATTTGA+GGG - chr2_4:64074818-64074837 None:intergenic 25.0%
! AATTCAGATCTTGCATTATA+AGG - chr2_4:64074857-64074876 None:intergenic 25.0%
! TGATTGTAGCCTAAAATATA+TGG + chr2_4:64074922-64074941 Msa0342150:three_prime_UTR 25.0%
! AACTTGAAACATTAACACAA+GGG - chr2_4:64074991-64075010 None:intergenic 25.0%
! TGCAGAAAATAAGGTTAAAA+AGG + chr2_4:64075534-64075553 Msa0342150:three_prime_UTR 25.0%
!! TTATGTCCAGTAATTTTGAA+GGG + chr2_4:64075782-64075801 Msa0342150:three_prime_UTR 25.0%
! AATGAGATAAGATATAAGAG+AGG - chr2_4:64076145-64076164 None:intergenic 25.0%
! AAACTTGTCTAGTTATGTTA+TGG + chr2_4:64076380-64076399 Msa0342150:intron 25.0%
! ATGTAGATTATTAGTAAGGA+AGG + chr2_4:64076530-64076549 Msa0342150:intron 25.0%
!!! AAGTTCGTGGTTTTTTTTTA+CGG + chr2_4:64076926-64076945 Msa0342150:intron 25.0%
!! AAAATTACAAAACTTTTCGC+TGG - chr2_4:64077064-64077083 None:intergenic 25.0%
! AAAATTAACATGCAAAAGAG+GGG - chr2_4:64077137-64077156 None:intergenic 25.0%
! CAAAATTAACATGCAAAAGA+GGG - chr2_4:64077138-64077157 None:intergenic 25.0%
! TCAAAATTAACATGCAAAAG+AGG - chr2_4:64077139-64077158 None:intergenic 25.0%
!! ATGTCATCTAAAATACTTTC+TGG + chr2_4:64077158-64077177 Msa0342150:intron 25.0%
!! ATATGTGAATCCATTTTGAA+GGG + chr2_4:64077496-64077515 Msa0342150:three_prime_UTR 25.0%
! CAACATCATACATTATAAGT+CGG - chr2_4:64077611-64077630 None:intergenic 25.0%
! CTTATAATGTATGATGTTGT+TGG + chr2_4:64077612-64077631 Msa0342150:three_prime_UTR 25.0%
! GATGTATAGATAGATATTGA+AGG + chr2_4:64077740-64077759 Msa0342150:three_prime_UTR 25.0%
GTTGCTTAAAAAAACAGGTT+TGG - chr2_4:64071353-64071372 None:intergenic 30.0%
AGAATGAAATGGAACTTGAT+GGG - chr2_4:64071419-64071438 None:intergenic 30.0%
ATGAATGTGTGAGAATGAAA+TGG - chr2_4:64071430-64071449 None:intergenic 30.0%
TGAGAAAAAAGAATTAGGAG+TGG + chr2_4:64071812-64071831 Msa0342150:five_prime_UTR 30.0%
!!! GTTTTGAGAATTTCCAAGAT+GGG + chr2_4:64071834-64071853 Msa0342150:exon 30.0%
! TTTTGTTAATCTGGCAAAAC+TGG + chr2_4:64072144-64072163 Msa0342150:intron 30.0%
! TCAAATTCACAACCATTTTC+AGG + chr2_4:64072539-64072558 Msa0342150:intron 30.0%
CAAGCATCAAATCAAATGTT+TGG - chr2_4:64072667-64072686 None:intergenic 30.0%
TTACAAAGCACAAAATTCCA+AGG - chr2_4:64072850-64072869 None:intergenic 30.0%
!! TTGTTTTTCTTCAGCTAATC+AGG + chr2_4:64073063-64073082 Msa0342150:intron 30.0%
! TGTTTTTCTTCAGCTAATCA+GGG + chr2_4:64073064-64073083 Msa0342150:intron 30.0%
ACCGTATAGTAAAAAGCTAA+TGG - chr2_4:64073368-64073387 None:intergenic 30.0%
AATAATCTAGTCATTGTTGC+AGG + chr2_4:64073640-64073659 Msa0342150:three_prime_UTR 30.0%
!! GACATGTTTTCTTGTTTCAA+TGG + chr2_4:64073711-64073730 Msa0342150:intron 30.0%
GAAATGCTTAGAACAAAAAG+TGG - chr2_4:64074044-64074063 None:intergenic 30.0%
TAACAAAGAAAAGGACTTAC+AGG - chr2_4:64074164-64074183 None:intergenic 30.0%
CAAACATTAATAGTTCGGTT+CGG + chr2_4:64074296-64074315 Msa0342150:intron 30.0%
!! ATTCATGATTTGGTTCAGAA+AGG - chr2_4:64074326-64074345 None:intergenic 30.0%
!! GATACAGATAATGGAGAATA+TGG + chr2_4:64074495-64074514 Msa0342150:intron 30.0%
AGAATAGTCTTTGGATAGAA+GGG - chr2_4:64074575-64074594 None:intergenic 30.0%
TTACAAATTTCTCCGCTTAA+AGG - chr2_4:64074761-64074780 None:intergenic 30.0%
! CGGAGAAATTTGTAATTTTC+AGG + chr2_4:64074766-64074785 Msa0342150:three_prime_UTR 30.0%
CAGGTTTGAATCAAAATTTG+AGG - chr2_4:64074819-64074838 None:intergenic 30.0%
! TTTGCTGCTCCATATATTTT+AGG - chr2_4:64074934-64074953 None:intergenic 30.0%
AGCAAAATTTATCTGTAGCT+GGG + chr2_4:64074948-64074967 Msa0342150:three_prime_UTR 30.0%
GAACTTGAAACATTAACACA+AGG - chr2_4:64074992-64075011 None:intergenic 30.0%
TGGAATGAATAATCTTCTGA+GGG + chr2_4:64075111-64075130 Msa0342150:three_prime_UTR 30.0%
AAATTAGCTGCAGATACTTT+CGG - chr2_4:64075163-64075182 None:intergenic 30.0%
ATCTGTTGAAGCAAACTTAA+AGG - chr2_4:64075230-64075249 None:intergenic 30.0%
! GATGACCTGTTTGATATTTT+AGG + chr2_4:64075442-64075461 Msa0342150:three_prime_UTR 30.0%
CTCAGTTAATGAATCAATGT+TGG + chr2_4:64075600-64075619 Msa0342150:three_prime_UTR 30.0%
!! TCATCGGAATTTTGTTTCAA+AGG - chr2_4:64075694-64075713 None:intergenic 30.0%
! GTTATGTCCAGTAATTTTGA+AGG + chr2_4:64075781-64075800 Msa0342150:three_prime_UTR 30.0%
!! TATGTCCAGTAATTTTGAAG+GGG + chr2_4:64075783-64075802 Msa0342150:three_prime_UTR 30.0%
!! TTGTTAGGTTTTTCGAAGAA+TGG + chr2_4:64075808-64075827 Msa0342150:three_prime_UTR 30.0%
TATCAAACTACAACTGTATG+TGG + chr2_4:64075901-64075920 Msa0342150:three_prime_UTR 30.0%
CATGAAAATAGTGTTTCAAC+TGG + chr2_4:64075967-64075986 Msa0342150:three_prime_UTR 30.0%
TTAGATTTGCAAACTTCATC+CGG - chr2_4:64076006-64076025 None:intergenic 30.0%
TTTGCAAATCTAATCGCAAA+AGG + chr2_4:64076013-64076032 Msa0342150:three_prime_UTR 30.0%
!! GAAATTACTTTTGCTCCATT+TGG - chr2_4:64076123-64076142 None:intergenic 30.0%
! GAAGAAAAGCATATGCTTAA+TGG - chr2_4:64076272-64076291 None:intergenic 30.0%
TAGATTATTAGTAAGGAAGG+TGG + chr2_4:64076533-64076552 Msa0342150:intron 30.0%
AGATTATTAGTAAGGAAGGT+GGG + chr2_4:64076534-64076553 Msa0342150:intron 30.0%
ATCTCTATAATCTGTTTGCT+TGG + chr2_4:64076729-64076748 Msa0342150:intron 30.0%
! GAAATAGCTGACTTAATAAG+AGG + chr2_4:64076794-64076813 Msa0342150:three_prime_UTR 30.0%
AATCTCACAATGACAAAATC+TGG + chr2_4:64076848-64076867 Msa0342150:three_prime_UTR 30.0%
ATCTCACAATGACAAAATCT+GGG + chr2_4:64076849-64076868 Msa0342150:three_prime_UTR 30.0%
TCTTATAGTGAAGACAACAT+CGG - chr2_4:64077110-64077129 None:intergenic 30.0%
!! TACTTTCTGGTTTAATTTCC+AGG + chr2_4:64077171-64077190 Msa0342150:intron 30.0%
TAAAGAGTTATAACGCAACA+TGG - chr2_4:64077296-64077315 None:intergenic 30.0%
!! ACATGGTTTCTTCTAAAGTA+TGG + chr2_4:64077354-64077373 Msa0342150:three_prime_UTR 30.0%
! CATATGTGAATCCATTTTGA+AGG + chr2_4:64077495-64077514 Msa0342150:three_prime_UTR 30.0%
GCATTAATTTCCCTTCAAAA+TGG - chr2_4:64077509-64077528 None:intergenic 30.0%
!! TAACCGAGTGTTTATTTTTC+TGG + chr2_4:64077579-64077598 Msa0342150:three_prime_UTR 30.0%
ACACCAGAAAAATAAACACT+CGG - chr2_4:64077585-64077604 None:intergenic 30.0%
!! AGTGTTTATTTTTCTGGTGT+TGG + chr2_4:64077585-64077604 Msa0342150:three_prime_UTR 30.0%
TAGATAGATATTGAAGGGTA+TGG + chr2_4:64077746-64077765 Msa0342150:three_prime_UTR 30.0%
TAGAAGAGCAACAAAAGAAA+AGG - chr2_4:64077807-64077826 None:intergenic 30.0%
AATGTAATGTAACACTTCCA+AGG - chr2_4:64077841-64077860 None:intergenic 30.0%
CCGAGGATGACATTAAATTT+GGG - chr2_4:64071212-64071231 None:intergenic 35.0%
CCCAAATTTAATGTCATCCT+CGG + chr2_4:64071209-64071228 Msa0342150:intron 35.0%
ACCGAGGATGACATTAAATT+TGG - chr2_4:64071213-64071232 None:intergenic 35.0%
GAGAATGAAATGGAACTTGA+TGG - chr2_4:64071420-64071439 None:intergenic 35.0%
ATGCTTGTAGAGAGACAAAA+TGG - chr2_4:64071487-64071506 None:intergenic 35.0%
AGAATTTCTTCAGCTGGAAA+TGG + chr2_4:64071581-64071600 Msa0342150:five_prime_UTR 35.0%
AACTTGGATCCAAAAAGAAG+TGG + chr2_4:64071617-64071636 Msa0342150:five_prime_UTR 35.0%
! AGAACTTGCTTGAAAATGCA+TGG + chr2_4:64071720-64071739 Msa0342150:five_prime_UTR 35.0%
!!! GGTTTTGAGAATTTCCAAGA+TGG + chr2_4:64071833-64071852 Msa0342150:exon 35.0%
TTTCAACAGAAAACCCATCT+TGG - chr2_4:64071850-64071869 None:intergenic 35.0%
TGTGTGGTAGGAATAATCAA+TGG + chr2_4:64071886-64071905 Msa0342150:CDS 35.0%
ATACATGCATGATGCATATC+TGG + chr2_4:64072239-64072258 Msa0342150:intron 35.0%
TTATTGTTCAGCTCACTTTG+AGG + chr2_4:64072494-64072513 Msa0342150:intron 35.0%
!! GGATTATCAATGATTTTGGC+AGG - chr2_4:64072646-64072665 None:intergenic 35.0%
GTGACCAATCAATAACACTT+CGG - chr2_4:64072778-64072797 None:intergenic 35.0%
!! ATTGATTGGTCACTGCTTTT+TGG + chr2_4:64072785-64072804 Msa0342150:intron 35.0%
GCTGAATATTCATTCTTCCT+TGG + chr2_4:64072830-64072849 Msa0342150:intron 35.0%
CACAAGATAATCAATCCAGT+TGG - chr2_4:64072959-64072978 None:intergenic 35.0%
!! TACTACTGTGATTTTGGAGA+AGG + chr2_4:64073258-64073277 Msa0342150:intron 35.0%
!! ACTTGACAGGCTATTGATTT+GGG + chr2_4:64073445-64073464 Msa0342150:intron 35.0%
GGTAGGTACTTTATCATTGT+TGG + chr2_4:64073668-64073687 Msa0342150:intron 35.0%
AGGTACTTTATCATTGTTGG+AGG + chr2_4:64073671-64073690 Msa0342150:intron 35.0%
CTTGAACGATTTCGCTAAAA+AGG + chr2_4:64073813-64073832 Msa0342150:three_prime_UTR 35.0%
CAAAAATAGCTTCATACCTC+AGG - chr2_4:64073847-64073866 None:intergenic 35.0%
TATGCAAGTTTGGTTGGAAA+AGG + chr2_4:64074201-64074220 Msa0342150:intron 35.0%
ATGCAAGTTTGGTTGGAAAA+GGG + chr2_4:64074202-64074221 Msa0342150:intron 35.0%
GGACAATTCAGTTTCTGTAA+AGG + chr2_4:64074223-64074242 Msa0342150:intron 35.0%
AGTTTCTGTAAAGGTAGTTC+TGG + chr2_4:64074232-64074251 Msa0342150:intron 35.0%
! AAACACATAACTGGTCTGTT+CGG + chr2_4:64074265-64074284 Msa0342150:intron 35.0%
GGAGCCAAACATTAATAGTT+CGG + chr2_4:64074291-64074310 Msa0342150:intron 35.0%
CGAACCGAACTATTAATGTT+TGG - chr2_4:64074298-64074317 None:intergenic 35.0%
CCGACCAAAATATTGTGATT+GGG - chr2_4:64074381-64074400 None:intergenic 35.0%
!!! CCCAATCACAATATTTTGGT+CGG + chr2_4:64074378-64074397 Msa0342150:intron 35.0%
ACCGACCAAAATATTGTGAT+TGG - chr2_4:64074382-64074401 None:intergenic 35.0%
TGTTTAGCTGAGAGGAATAA+CGG - chr2_4:64074464-64074483 None:intergenic 35.0%
!! AAAATTGCTGTTTAGCTGAG+AGG - chr2_4:64074472-64074491 None:intergenic 35.0%
CAGAATAGTCTTTGGATAGA+AGG - chr2_4:64074576-64074595 None:intergenic 35.0%
AAGTTTGGCAGAATAGTCTT+TGG - chr2_4:64074584-64074603 None:intergenic 35.0%
AAGTCGTTCGTTAGAAAGTT+TGG - chr2_4:64074599-64074618 None:intergenic 35.0%
AAATTTCTCCGCTTAAAGGA+TGG - chr2_4:64074757-64074776 None:intergenic 35.0%
!! TAATTTTCAGGGTAGAGTTG+TGG + chr2_4:64074778-64074797 Msa0342150:three_prime_UTR 35.0%
TCTGAATTCAACAACTTTGC+CGG + chr2_4:64074869-64074888 Msa0342150:three_prime_UTR 35.0%
CAGCAAAATTTATCTGTAGC+TGG + chr2_4:64074947-64074966 Msa0342150:three_prime_UTR 35.0%
TACTGCTAGAACTCAGATTA+TGG - chr2_4:64075060-64075079 None:intergenic 35.0%
AGCAGTACTTCATTACTTAG+AGG + chr2_4:64075073-64075092 Msa0342150:three_prime_UTR 35.0%
TTCATTACTTAGAGGAATCC+CGG + chr2_4:64075081-64075100 Msa0342150:three_prime_UTR 35.0%
TTATTCATTCCACCATGTAC+CGG - chr2_4:64075103-64075122 None:intergenic 35.0%
GTGGAATGAATAATCTTCTG+AGG + chr2_4:64075110-64075129 Msa0342150:three_prime_UTR 35.0%
GTATCTGCAGCTAATTTATC+CGG + chr2_4:64075166-64075185 Msa0342150:three_prime_UTR 35.0%
GATAAACTATGACATGCTTC+AGG + chr2_4:64075255-64075274 Msa0342150:three_prime_UTR 35.0%
!! CATCTTTTTGAAAGCAATCG+CGG - chr2_4:64075348-64075367 None:intergenic 35.0%
CCACACCTAAAATATCAAAC+AGG - chr2_4:64075450-64075469 None:intergenic 35.0%
!! CCTGTTTGATATTTTAGGTG+TGG + chr2_4:64075447-64075466 Msa0342150:three_prime_UTR 35.0%
AGATGGCAATGCAGAAAATA+AGG + chr2_4:64075525-64075544 Msa0342150:three_prime_UTR 35.0%
AAAAGGAAACATGTCAGAAC+AGG + chr2_4:64075551-64075570 Msa0342150:three_prime_UTR 35.0%
AAAGGAAACATGTCAGAACA+GGG + chr2_4:64075552-64075571 Msa0342150:three_prime_UTR 35.0%
AATGAATCAATGTTGGACAG+TGG + chr2_4:64075607-64075626 Msa0342150:three_prime_UTR 35.0%
!! ATTTTGTTTCAAAGGCGGTT+TGG - chr2_4:64075686-64075705 None:intergenic 35.0%
!! TCGGAATTTTGTTTCAAAGG+CGG - chr2_4:64075691-64075710 None:intergenic 35.0%
TGTTCTGCAAGATATGTCAT+CGG - chr2_4:64075710-64075729 None:intergenic 35.0%
ATCTTGCAGAACAACATTGA+CGG + chr2_4:64075717-64075736 Msa0342150:three_prime_UTR 35.0%
CAAAATTACTGGACATAACC+TGG - chr2_4:64075780-64075799 None:intergenic 35.0%
!! ATGTCCAGTAATTTTGAAGG+GGG + chr2_4:64075784-64075803 Msa0342150:three_prime_UTR 35.0%
!! AATTTTGAAGGGGGATTGTT+AGG + chr2_4:64075793-64075812 Msa0342150:three_prime_UTR 35.0%
!! TTAGGTTTTTCGAAGAATGG+AGG + chr2_4:64075811-64075830 Msa0342150:three_prime_UTR 35.0%
TTCGAAGAATGGAGGTAAAA+TGG + chr2_4:64075819-64075838 Msa0342150:three_prime_UTR 35.0%
TCGAAGAATGGAGGTAAAAT+GGG + chr2_4:64075820-64075839 Msa0342150:three_prime_UTR 35.0%
! CTGTAGAAACTAGTTCTCTA+AGG + chr2_4:64075845-64075864 Msa0342150:three_prime_UTR 35.0%
TAGATTTGCAAACTTCATCC+GGG - chr2_4:64076005-64076024 None:intergenic 35.0%
TGAATCATTTGGCGATCTTT+AGG - chr2_4:64076069-64076088 None:intergenic 35.0%
TGACACGATCTTGAATCATT+TGG - chr2_4:64076080-64076099 None:intergenic 35.0%
TTGCGAGAAATTGTTCCAAA+TGG + chr2_4:64076105-64076124 Msa0342150:three_prime_UTR 35.0%
!!! GACAAGTTTTTTGAGACATG+AGG - chr2_4:64076369-64076388 None:intergenic 35.0%
TGCACATACACACACAAATT+TGG + chr2_4:64076432-64076451 Msa0342150:intron 35.0%
!! ACAGAGACACAAATTTGTTG+AGG + chr2_4:64076464-64076483 Msa0342150:intron 35.0%
!!! GTTTTGAAAGACAACTTCGA+GGG + chr2_4:64076560-64076579 Msa0342150:three_prime_UTR 35.0%
! AATAGGACAGACCATTGATT+GGG - chr2_4:64076615-64076634 None:intergenic 35.0%
TAATAGGACAGACCATTGAT+TGG - chr2_4:64076616-64076635 None:intergenic 35.0%
! GCTGACTTAATAAGAGGATT+AGG + chr2_4:64076800-64076819 Msa0342150:three_prime_UTR 35.0%
! TAGTCAGTACATGGCTTTTA+TGG - chr2_4:64076900-64076919 None:intergenic 35.0%
! CTTCAAGATTAGTCAGTACA+TGG - chr2_4:64076909-64076928 None:intergenic 35.0%
TTATAGTGAAGACAACATCG+GGG - chr2_4:64077108-64077127 None:intergenic 35.0%
CTTATAGTGAAGACAACATC+GGG - chr2_4:64077109-64077128 None:intergenic 35.0%
! GTTTAATTTCCAGGCAAACA+GGG + chr2_4:64077180-64077199 Msa0342150:intron 35.0%
TTATAACTCTTTACCCCAGA+AGG + chr2_4:64077303-64077322 Msa0342150:three_prime_UTR 35.0%
TTCATACTATTACGCCTTCT+GGG - chr2_4:64077320-64077339 None:intergenic 35.0%
TTTCATACTATTACGCCTTC+TGG - chr2_4:64077321-64077340 None:intergenic 35.0%
! GAAGGCGTAATAGTATGAAA+TGG + chr2_4:64077321-64077340 Msa0342150:three_prime_UTR 35.0%
! GAAATGGATCACTTGTTACA+TGG + chr2_4:64077337-64077356 Msa0342150:three_prime_UTR 35.0%
TTGAAGGGAAATTAATGCGT+AGG + chr2_4:64077511-64077530 Msa0342150:three_prime_UTR 35.0%
! ATGACATGCATCGGATTTTT+GGG + chr2_4:64077670-64077689 Msa0342150:three_prime_UTR 35.0%
TAAATCACAACACCAACTTC+TGG - chr2_4:64077715-64077734 None:intergenic 35.0%
! TTGAAGGGTATGGAAAGTAA+AGG + chr2_4:64077756-64077775 Msa0342150:three_prime_UTR 35.0%
!! GTAAATGTAAGCTCTAAGTG+TGG + chr2_4:64077876-64077895 Msa0342150:three_prime_UTR 35.0%
! CAGATGCAAATGGTAATGTG+TGG - chr2_4:64071154-64071173 None:intergenic 40.0%
TTGTGTAGCTCAGATGCAAA+TGG - chr2_4:64071164-64071183 None:intergenic 40.0%
GGGTCACACAAATGTTATCA+TGG - chr2_4:64071192-64071211 None:intergenic 40.0%
! GAGAAAGAGGAAGGGTTTTT+AGG - chr2_4:64071240-64071259 None:intergenic 40.0%
TGTGGTTAGAGAAAGAGGAA+GGG - chr2_4:64071248-64071267 None:intergenic 40.0%
!! AAGTGTTGAGTACTTGAGAG+AGG - chr2_4:64071388-64071407 None:intergenic 40.0%
!! CTCTCTAGAATTTCTTCAGC+TGG + chr2_4:64071575-64071594 Msa0342150:five_prime_UTR 40.0%
TTGGATCCAAAAAGAAGTGG+AGG + chr2_4:64071620-64071639 Msa0342150:five_prime_UTR 40.0%
TGGATCCAAAAAGAAGTGGA+GGG + chr2_4:64071621-64071640 Msa0342150:five_prime_UTR 40.0%
TCCAAATCCTAACTACCACA+CGG - chr2_4:64071679-64071698 None:intergenic 40.0%
!! GAAGCTTTGAAGACTTTGTG+TGG + chr2_4:64071870-64071889 Msa0342150:CDS 40.0%
! CTTTGAAGACTTTGTGTGGT+AGG + chr2_4:64071874-64071893 Msa0342150:CDS 40.0%
!! AATGGTCTTATGCTGTGTTC+TGG + chr2_4:64071904-64071923 Msa0342150:CDS 40.0%
!! TATGCTGTGTTCTGGAAGAT+TGG + chr2_4:64071912-64071931 Msa0342150:CDS 40.0%
TCTGGCAAAACTGGTAAACT+TGG + chr2_4:64072153-64072172 Msa0342150:intron 40.0%
CTGGCAAAACTGGTAAACTT+GGG + chr2_4:64072154-64072173 Msa0342150:intron 40.0%
CAAAACTGGTAAACTTGGGT+GGG + chr2_4:64072158-64072177 Msa0342150:intron 40.0%
! CATGCCGAAGTGTTATTGAT+TGG + chr2_4:64072771-64072790 Msa0342150:intron 40.0%
!! GCTAATCAGGGTTTGATTTG+TGG + chr2_4:64073076-64073095 Msa0342150:intron 40.0%
GTGACACATCACAACAATAG+CGG - chr2_4:64073121-64073140 None:intergenic 40.0%
! AGGGTGTACTACTGTGATTT+TGG + chr2_4:64073252-64073271 Msa0342150:intron 40.0%
!! TGAGTATGCTTTGACTTGAC+AGG + chr2_4:64073432-64073451 Msa0342150:intron 40.0%
! GACTTGACAGGCTATTGATT+TGG + chr2_4:64073444-64073463 Msa0342150:intron 40.0%
TGAGGAGAAGGACAAGAAAA+GGG - chr2_4:64073488-64073507 None:intergenic 40.0%
ATGAGGAGAAGGACAAGAAA+AGG - chr2_4:64073489-64073508 None:intergenic 40.0%
CTTCTCCTCATGACATTGTT+GGG + chr2_4:64073498-64073517 Msa0342150:CDS 40.0%
TCGAATTTGCCAAATCCGAA+CGG + chr2_4:64073524-64073543 Msa0342150:CDS 40.0%
TCCTCTTGAATTCCTAGATG+AGG - chr2_4:64073583-64073602 None:intergenic 40.0%
TCATCTAGGAATTCAAGAGG+AGG + chr2_4:64073582-64073601 Msa0342150:exon 40.0%
GGAGGATAAAGTCTCTTCTT+TGG + chr2_4:64073600-64073619 Msa0342150:three_prime_UTR 40.0%
TAGTCATTGTTGCAGGTGAA+GGG + chr2_4:64073647-64073666 Msa0342150:three_prime_UTR 40.0%
ACTCAGTATAATTGGACGCT+CGG + chr2_4:64073762-64073781 Msa0342150:intron 40.0%
CATTTACCAACAGTCATGAG+TGG + chr2_4:64073785-64073804 Msa0342150:three_prime_UTR 40.0%
! TAAAAAGGCATATCCACCTG+AGG + chr2_4:64073828-64073847 Msa0342150:three_prime_UTR 40.0%
AAATAGCTTCATACCTCAGG+TGG - chr2_4:64073844-64073863 None:intergenic 40.0%
! ATGCATGACCAATTTTCAGC+TGG + chr2_4:64073990-64074009 Msa0342150:three_prime_UTR 40.0%
CCAATTTGAACAACTCCATG+AGG - chr2_4:64074131-64074150 None:intergenic 40.0%
CCTCATGGAGTTGTTCAAAT+TGG + chr2_4:64074128-64074147 Msa0342150:three_prime_UTR 40.0%
!! CTGTAAAGGTAGTTCTGGTT+CGG + chr2_4:64074237-64074256 Msa0342150:intron 40.0%
!! TCGGTTTGGAAACACATAAC+TGG + chr2_4:64074256-64074275 Msa0342150:intron 40.0%
TGTGATTGGGTAATAACGCA+AGG - chr2_4:64074368-64074387 None:intergenic 40.0%
!! TCTTTGGATAGAAGGGCATT+GGG - chr2_4:64074568-64074587 None:intergenic 40.0%
CTTTCTAACGAACGACTTGA+TGG + chr2_4:64074601-64074620 Msa0342150:three_prime_UTR 40.0%
ACAGATGAATCAACAGACGA+AGG - chr2_4:64074646-64074665 None:intergenic 40.0%
! TTAGAGCCATTGACTACTGA+AGG - chr2_4:64074688-64074707 None:intergenic 40.0%
! GGATGGAGTGTTTGAACATT+AGG - chr2_4:64074740-64074759 None:intergenic 40.0%
CAAACACTCCATCCTTTAAG+CGG + chr2_4:64074746-64074765 Msa0342150:three_prime_UTR 40.0%
! AAGGAACTGAATGCTTTTGC+AGG - chr2_4:64074838-64074857 None:intergenic 40.0%
TAGGCTACAATCACTTTGAC+CGG - chr2_4:64074915-64074934 None:intergenic 40.0%
TATTCATTCCACCATGTACC+GGG - chr2_4:64075102-64075121 None:intergenic 40.0%
AATTTATCCGGAGCACAAGT+TGG + chr2_4:64075178-64075197 Msa0342150:three_prime_UTR 40.0%
ATTTATCCGGAGCACAAGTT+GGG + chr2_4:64075179-64075198 Msa0342150:three_prime_UTR 40.0%
CGCGATTGCTTTCAAAAAGA+TGG + chr2_4:64075346-64075365 Msa0342150:three_prime_UTR 40.0%
CGCTGTCATCATAGATTGAA+TGG - chr2_4:64075374-64075393 None:intergenic 40.0%
GCACAAGCTTCTTCATGTTT+AGG - chr2_4:64075400-64075419 None:intergenic 40.0%
! CTGTTTGCTGATGAATCAGA+TGG + chr2_4:64075508-64075527 Msa0342150:three_prime_UTR 40.0%
!!! TTGGACAGTGGCATTTTTTC+TGG + chr2_4:64075619-64075638 Msa0342150:three_prime_UTR 40.0%
!!! TGGACAGTGGCATTTTTTCT+GGG + chr2_4:64075620-64075639 Msa0342150:three_prime_UTR 40.0%
AACAGACCACCTATTAGATG+CGG + chr2_4:64075648-64075667 Msa0342150:three_prime_UTR 40.0%
TCTTGCAGAACAACATTGAC+GGG + chr2_4:64075718-64075737 Msa0342150:three_prime_UTR 40.0%
CAATCCCCCTTCAAAATTAC+TGG - chr2_4:64075791-64075810 None:intergenic 40.0%
!! GAAACTAGTTCTCTAAGGTC+TGG + chr2_4:64075850-64075869 Msa0342150:three_prime_UTR 40.0%
AATCGCAAAAGGCTTAAACC+AGG + chr2_4:64076024-64076043 Msa0342150:three_prime_UTR 40.0%
!!! GGTTTTGAAAGACAACTTCG+AGG + chr2_4:64076559-64076578 Msa0342150:three_prime_UTR 40.0%
GATGCTAATCGAGGTAATGA+TGG + chr2_4:64076664-64076683 Msa0342150:intron 40.0%
ATTAGGCTTGACCATCTGAA+GGG + chr2_4:64076817-64076836 Msa0342150:three_prime_UTR 40.0%
CTGACTAATCTTGAAGTTCG+TGG + chr2_4:64076913-64076932 Msa0342150:intron 40.0%
! GGTTTAATTTCCAGGCAAAC+AGG + chr2_4:64077179-64077198 Msa0342150:intron 40.0%
CAACATGGTATCAACTGCAT+TGG - chr2_4:64077281-64077300 None:intergenic 40.0%
TCATACTATTACGCCTTCTG+GGG - chr2_4:64077319-64077338 None:intergenic 40.0%
ATTGGACTTGATGTTGGTCA+TGG - chr2_4:64077410-64077429 None:intergenic 40.0%
TCTCAGATTGGACTTGATGT+TGG - chr2_4:64077416-64077435 None:intergenic 40.0%
! CAAGTCCAATCTGAGATTTC+AGG + chr2_4:64077420-64077439 Msa0342150:three_prime_UTR 40.0%
CTGATGTATTACTCGACTCT+CGG + chr2_4:64077647-64077666 Msa0342150:three_prime_UTR 40.0%
! GATGACATGCATCGGATTTT+TGG + chr2_4:64077669-64077688 Msa0342150:three_prime_UTR 40.0%
! TGACATGCATCGGATTTTTG+GGG + chr2_4:64077671-64077690 Msa0342150:three_prime_UTR 40.0%
CTTCTACTCATAGTTCACCT+TGG + chr2_4:64077821-64077840 Msa0342150:three_prime_UTR 40.0%
! AAGTGTGGTTTGTATGTCAG+TGG + chr2_4:64077891-64077910 Msa0342150:three_prime_UTR 40.0%
GTATGTCAGTGGAATCAAAG+AGG + chr2_4:64077902-64077921 Msa0342150:three_prime_UTR 40.0%
! ACTCAAGTGCTTCTGAAGAG+GGG - chr2_4:64071102-64071121 None:intergenic 45.0%
! CACTCAAGTGCTTCTGAAGA+GGG - chr2_4:64071103-64071122 None:intergenic 45.0%
! TCACTCAAGTGCTTCTGAAG+AGG - chr2_4:64071104-64071123 None:intergenic 45.0%
GTGTGGTTAGAGAAAGAGGA+AGG - chr2_4:64071249-64071268 None:intergenic 45.0%
GTGTGTGTGGTTAGAGAAAG+AGG - chr2_4:64071253-64071272 None:intergenic 45.0%
TGAGTTGTGTTGTGTGTGTG+TGG - chr2_4:64071266-64071285 None:intergenic 45.0%
TGGTTTCAGCTTCTGCTTCT+TGG - chr2_4:64071333-64071352 None:intergenic 45.0%
CTCTACAAGCATGAATCTCG+TGG + chr2_4:64071495-64071514 Msa0342150:five_prime_UTR 45.0%
TGGCATGCTGAAACTGAACT+TGG + chr2_4:64071601-64071620 Msa0342150:five_prime_UTR 45.0%
! CTCAACCCTCCACTTCTTTT+TGG - chr2_4:64071629-64071648 None:intergenic 45.0%
AGAACACAACAAGCAGGAGA+GGG + chr2_4:64071647-64071666 Msa0342150:five_prime_UTR 45.0%
GCAAAACTGGTAAACTTGGG+TGG + chr2_4:64072157-64072176 Msa0342150:intron 45.0%
TTACCAGATGCACTACCAAC+TGG + chr2_4:64072941-64072960 Msa0342150:intron 45.0%
!! AATCCAGTTGGTAGTGCATC+TGG - chr2_4:64072947-64072966 None:intergenic 45.0%
ATTCCAAACACGCACTGAGA+CGG - chr2_4:64073211-64073230 None:intergenic 45.0%
! TCAGTGCGTGTTTGGAATGA+CGG + chr2_4:64073213-64073232 Msa0342150:intron 45.0%
! GTTTGGAATGACGGTGAGTT+TGG + chr2_4:64073222-64073241 Msa0342150:intron 45.0%
ACGGTGAGTTTGGTAGAATC+AGG + chr2_4:64073232-64073251 Msa0342150:intron 45.0%
CGGTGAGTTTGGTAGAATCA+GGG + chr2_4:64073233-64073252 Msa0342150:intron 45.0%
CCAACAATGTCATGAGGAGA+AGG - chr2_4:64073500-64073519 None:intergenic 45.0%
CCTTCTCCTCATGACATTGT+TGG + chr2_4:64073497-64073516 Msa0342150:CDS 45.0%
GACATCCCAACAATGTCATG+AGG - chr2_4:64073506-64073525 None:intergenic 45.0%
CGAATTTGCCAAATCCGAAC+GGG + chr2_4:64073525-64073544 Msa0342150:CDS 45.0%
GAATTTGCCAAATCCGAACG+GGG + chr2_4:64073526-64073545 Msa0342150:CDS 45.0%
GACTTTCAATCGCCTCATCT+AGG + chr2_4:64073568-64073587 Msa0342150:CDS 45.0%
GCCTCATCTAGGAATTCAAG+AGG + chr2_4:64073579-64073598 Msa0342150:exon 45.0%
CTAGTCATTGTTGCAGGTGA+AGG + chr2_4:64073646-64073665 Msa0342150:three_prime_UTR 45.0%
GAGAATCCACTCATGACTGT+TGG - chr2_4:64073794-64073813 None:intergenic 45.0%
CCTGCATTCCAGCTGAAAAT+TGG - chr2_4:64074001-64074020 None:intergenic 45.0%
! CCAATTTTCAGCTGGAATGC+AGG + chr2_4:64073998-64074017 Msa0342150:three_prime_UTR 45.0%
GTTATTCCTGTGCTTCCTCA+TGG + chr2_4:64074113-64074132 Msa0342150:three_prime_UTR 45.0%
!! AAGGTAGTTCTGGTTCGGTT+TGG + chr2_4:64074242-64074261 Msa0342150:intron 45.0%
! CATAACTGGTCTGTTCGGTT+TGG + chr2_4:64074270-64074289 Msa0342150:intron 45.0%
CGCAAGGATATCACTGATCT+AGG - chr2_4:64074352-64074371 None:intergenic 45.0%
! GTCTTTGGATAGAAGGGCAT+TGG - chr2_4:64074569-64074588 None:intergenic 45.0%
! CTTGATGGACCTTCTACTTC+CGG + chr2_4:64074616-64074635 Msa0342150:three_prime_UTR 45.0%
TCCACTCCTTCAGTAGTCAA+TGG + chr2_4:64074679-64074698 Msa0342150:three_prime_UTR 45.0%
CGCAGCATGAGATGAATAAC+TGG - chr2_4:64074714-64074733 None:intergenic 45.0%
!! TTTTCAGGGTAGAGTTGTGG+AGG + chr2_4:64074781-64074800 Msa0342150:three_prime_UTR 45.0%
CTTTGACCGGATTGACCAAA+CGG - chr2_4:64074902-64074921 None:intergenic 45.0%
TTCATTCCCAACTTGTGCTC+CGG - chr2_4:64075188-64075207 None:intergenic 45.0%
TGCTCCTCGGGATTAAAAGA+GGG - chr2_4:64075292-64075311 None:intergenic 45.0%
ATGCTCCTCGGGATTAAAAG+AGG - chr2_4:64075293-64075312 None:intergenic 45.0%
ACTATTCAGCACATGCTCCT+CGG - chr2_4:64075305-64075324 None:intergenic 45.0%
CTGAATAGTGGTCATATCCC+AGG + chr2_4:64075316-64075335 Msa0342150:three_prime_UTR 45.0%
! ACAAACTTCTGAAAGGCCAC+TGG + chr2_4:64075479-64075498 Msa0342150:three_prime_UTR 45.0%
CAGCAAACAGTTCATTCCAG+TGG - chr2_4:64075498-64075517 None:intergenic 45.0%
TTGAGACCACCGCATCTAAT+AGG - chr2_4:64075660-64075679 None:intergenic 45.0%
ATTAGATGCGGTGGTCTCAA+CGG + chr2_4:64075660-64075679 Msa0342150:three_prime_UTR 45.0%
CTTGCAGAACAACATTGACG+GGG + chr2_4:64075719-64075738 Msa0342150:three_prime_UTR 45.0%
! TCTAAGGTCTGGTTGTAGCA+AGG + chr2_4:64075861-64075880 Msa0342150:three_prime_UTR 45.0%
TCTGGTTGTAGCAAGGATGA+TGG + chr2_4:64075868-64075887 Msa0342150:three_prime_UTR 45.0%
CTCTCAACTTAGTTCGTGGT+TGG + chr2_4:64075924-64075943 Msa0342150:three_prime_UTR 45.0%
CTTAGTTCGTGGTTGGAGAA+TGG + chr2_4:64075931-64075950 Msa0342150:three_prime_UTR 45.0%
AACTGGATACTCTAAACGCC+CGG + chr2_4:64075984-64076003 Msa0342150:three_prime_UTR 45.0%
TTAAACCAGGAGAGAATCCC+AGG + chr2_4:64076037-64076056 Msa0342150:three_prime_UTR 45.0%
ATTTGGCGATCTTTAGGTCG+AGG - chr2_4:64076063-64076082 None:intergenic 45.0%
GCCGACAAGCTGAAACAAAA+CGG + chr2_4:64076310-64076329 Msa0342150:three_prime_UTR 45.0%
!!! CCCGTTTTGTTTCAGCTTGT+CGG - chr2_4:64076314-64076333 None:intergenic 45.0%
CCGACAAGCTGAAACAAAAC+GGG + chr2_4:64076311-64076330 Msa0342150:three_prime_UTR 45.0%
CGACAAGCTGAAACAAAACG+GGG + chr2_4:64076312-64076331 Msa0342150:three_prime_UTR 45.0%
GAAACAAAACGGGGAGTCTA+AGG + chr2_4:64076321-64076340 Msa0342150:three_prime_UTR 45.0%
! AAAACGGGGAGTCTAAGGTA+TGG + chr2_4:64076326-64076345 Msa0342150:intron 45.0%
TATTAGTAAGGAAGGTGGGC+TGG + chr2_4:64076538-64076557 Msa0342150:three_prime_UTR 45.0%
TTGAAAGACAACTTCGAGGG+AGG + chr2_4:64076563-64076582 Msa0342150:three_prime_UTR 45.0%
TGAAAGACAACTTCGAGGGA+GGG + chr2_4:64076564-64076583 Msa0342150:three_prime_UTR 45.0%
TGAGGTTGGATCCCAATCAA+TGG + chr2_4:64076601-64076620 Msa0342150:three_prime_UTR 45.0%
ATTCTTACAGATGCTCTGCG+AGG + chr2_4:64076754-64076773 Msa0342150:intron 45.0%
GATTAGGCTTGACCATCTGA+AGG + chr2_4:64076816-64076835 Msa0342150:three_prime_UTR 45.0%
TTAGGCTTGACCATCTGAAG+GGG + chr2_4:64076818-64076837 Msa0342150:three_prime_UTR 45.0%
ATTCCATTACCCCCTTCAGA+TGG - chr2_4:64076831-64076850 None:intergenic 45.0%
TATGTCACTCGTTCGTCTTC+TGG + chr2_4:64077225-64077244 Msa0342150:three_prime_UTR 45.0%
!! TCTTCTGGAGCAAACGATGA+AGG + chr2_4:64077240-64077259 Msa0342150:three_prime_UTR 45.0%
!! CTTCTGGAGCAAACGATGAA+GGG + chr2_4:64077241-64077260 Msa0342150:three_prime_UTR 45.0%
! GTCCAATCTGAGATTTCAGG+CGG + chr2_4:64077423-64077442 Msa0342150:three_prime_UTR 45.0%
! TGGCGTAGTTTTCCAGAAGT+TGG + chr2_4:64077700-64077719 Msa0342150:three_prime_UTR 45.0%
TTCTTTCTGACTCCCGACAC+TGG + chr2_4:64071069-64071088 Msa0342150:five_prime_UTR 50.0%
AGGGGTTATGAACCAGTGTC+GGG - chr2_4:64071084-64071103 None:intergenic 50.0%
GAGGGGTTATGAACCAGTGT+CGG - chr2_4:64071085-64071104 None:intergenic 50.0%
!! AGGGTTTTTAGGAGAGACCG+AGG - chr2_4:64071229-64071248 None:intergenic 50.0%
CTTCTTGGTGAGTGTGGAAG+TGG - chr2_4:64071318-64071337 None:intergenic 50.0%
CTTCTGCTTCTTGGTGAGTG+TGG - chr2_4:64071324-64071343 None:intergenic 50.0%
GGGTTGAGAACACAACAAGC+AGG + chr2_4:64071641-64071660 Msa0342150:five_prime_UTR 50.0%
GAGAACACAACAAGCAGGAG+AGG + chr2_4:64071646-64071665 Msa0342150:five_prime_UTR 50.0%
GAACACAACAAGCAGGAGAG+GGG + chr2_4:64071648-64071667 Msa0342150:five_prime_UTR 50.0%
GCCGTGTGGTAGTTAGGATT+TGG + chr2_4:64071675-64071694 Msa0342150:five_prime_UTR 50.0%
AGCGGTGAGAATGACAGAGA+AGG - chr2_4:64073103-64073122 None:intergenic 50.0%
TTACCGTCTCAGTGCGTGTT+TGG + chr2_4:64073205-64073224 Msa0342150:intron 50.0%
CATTGTTGCAGGTGAAGGGT+AGG + chr2_4:64073651-64073670 Msa0342150:intron 50.0%
! ACAACTCCATGAGGAAGCAC+AGG - chr2_4:64074122-64074141 None:intergenic 50.0%
AAGAGCCTGATCTTGCAGCT+CGG + chr2_4:64074535-64074554 Msa0342150:three_prime_UTR 50.0%
! ATCAACAGACGAAGGCACAC+CGG - chr2_4:64074638-64074657 None:intergenic 50.0%
! GCCATTGACTACTGAAGGAG+TGG - chr2_4:64074683-64074702 None:intergenic 50.0%
ACAGACAGAAGCCTCAGCTT+CGG + chr2_4:64075034-64075053 Msa0342150:three_prime_UTR 50.0%
TCAGATTATGGCCGAAGCTG+AGG - chr2_4:64075048-64075067 None:intergenic 50.0%
CTTAGAGGAATCCCGGTACA+TGG + chr2_4:64075088-64075107 Msa0342150:three_prime_UTR 50.0%
! CATCCCCTCTTTTAATCCCG+AGG + chr2_4:64075285-64075304 Msa0342150:three_prime_UTR 50.0%
GCTCCTCGGGATTAAAAGAG+GGG - chr2_4:64075291-64075310 None:intergenic 50.0%
CTATTCAGCACATGCTCCTC+GGG - chr2_4:64075304-64075323 None:intergenic 50.0%
! GAGGAGCATGTGCTGAATAG+TGG + chr2_4:64075304-64075323 Msa0342150:three_prime_UTR 50.0%
AGCAATCGCGGACAAAACCT+GGG - chr2_4:64075336-64075355 None:intergenic 50.0%
AAGCAATCGCGGACAAAACC+TGG - chr2_4:64075337-64075356 None:intergenic 50.0%
TGTGCTCAACAACCTCCATC+AGG + chr2_4:64075415-64075434 Msa0342150:three_prime_UTR 50.0%
AACAGGTCATCACCACCTGA+TGG - chr2_4:64075433-64075452 None:intergenic 50.0%
GGAAACATGTCAGAACAGGG+AGG + chr2_4:64075555-64075574 Msa0342150:three_prime_UTR 50.0%
ATGTCAGAACAGGGAGGCTA+CGG + chr2_4:64075561-64075580 Msa0342150:three_prime_UTR 50.0%
AGACCACCTATTAGATGCGG+TGG + chr2_4:64075651-64075670 Msa0342150:three_prime_UTR 50.0%
AGACCACCGCATCTAATAGG+TGG - chr2_4:64075657-64075676 None:intergenic 50.0%
ACAGACACGAGAGGGAATAG+AGG - chr2_4:64075755-64075774 None:intergenic 50.0%
ACCTGGTTACAGACACGAGA+GGG - chr2_4:64075763-64075782 None:intergenic 50.0%
AACCTGGTTACAGACACGAG+AGG - chr2_4:64075764-64075783 None:intergenic 50.0%
! GGTTGTAGCAAGGATGATGG+TGG + chr2_4:64075871-64075890 Msa0342150:three_prime_UTR 50.0%
GTGGCTCTCAACTTAGTTCG+TGG + chr2_4:64075920-64075939 Msa0342150:three_prime_UTR 50.0%
GTGTAGCATAGATGCACTGC+TGG + chr2_4:64076240-64076259 Msa0342150:intron 50.0%
GCATAGATGCACTGCTGGAA+CGG + chr2_4:64076245-64076264 Msa0342150:three_prime_UTR 50.0%
CGGCATGCTTTGTCACACTT+TGG - chr2_4:64076294-64076313 None:intergenic 50.0%
GAAAGACAACTTCGAGGGAG+GGG + chr2_4:64076565-64076584 Msa0342150:three_prime_UTR 50.0%
GCTACATGGGCATATGAGGT+TGG + chr2_4:64076587-64076606 Msa0342150:three_prime_UTR 50.0%
TCCTCGTCAGATGCTAATCG+AGG + chr2_4:64076655-64076674 Msa0342150:three_prime_UTR 50.0%
ACCTCGATTAGCATCTGACG+AGG - chr2_4:64076659-64076678 None:intergenic 50.0%
TACAGATGCTCTGCGAGGAA+CGG + chr2_4:64076759-64076778 Msa0342150:intron 50.0%
TAGGCTTGACCATCTGAAGG+GGG + chr2_4:64076819-64076838 Msa0342150:three_prime_UTR 50.0%
TGACCATCTGAAGGGGGTAA+TGG + chr2_4:64076825-64076844 Msa0342150:three_prime_UTR 50.0%
CTGGGCACGTTTCATTGTTG+AGG + chr2_4:64076867-64076886 Msa0342150:three_prime_UTR 50.0%
GACCGCCTGAAATCTCAGAT+TGG - chr2_4:64077428-64077447 None:intergenic 50.0%
GACTCTCGGATGACATGCAT+CGG + chr2_4:64077661-64077680 Msa0342150:three_prime_UTR 50.0%
!! GCATCGGATTTTTGGGGAGA+TGG + chr2_4:64077677-64077696 Msa0342150:three_prime_UTR 50.0%
!! TCGGATTTTTGGGGAGATGG+TGG + chr2_4:64077680-64077699 Msa0342150:three_prime_UTR 50.0%
GGTCATGCCGTGTGGTAGTT+AGG + chr2_4:64071669-64071688 Msa0342150:five_prime_UTR 55.0%
TTGCCAAATCCGAACGGGGA+CGG + chr2_4:64073530-64073549 Msa0342150:CDS 55.0%
AAACAACTCCCGTCCCCGTT+CGG - chr2_4:64073542-64073561 None:intergenic 55.0%
AGAGCCTGATCTTGCAGCTC+GGG + chr2_4:64074536-64074555 Msa0342150:three_prime_UTR 55.0%
TACACCCGAGCTGCAAGATC+AGG - chr2_4:64074543-64074562 None:intergenic 55.0%
! GAAGGCACACCGGAAGTAGA+AGG - chr2_4:64074628-64074647 None:intergenic 55.0%
TTGACCAAACGGCGCAGAAC+CGG - chr2_4:64074891-64074910 None:intergenic 55.0%
TCTGCGCCGTTTGGTCAATC+CGG + chr2_4:64074893-64074912 Msa0342150:three_prime_UTR 55.0%
AGAGGAATCCCGGTACATGG+TGG + chr2_4:64075091-64075110 Msa0342150:three_prime_UTR 55.0%
GCTCAACAACCTCCATCAGG+TGG + chr2_4:64075418-64075437 Msa0342150:three_prime_UTR 55.0%
AGGTCATCACCACCTGATGG+AGG - chr2_4:64075430-64075449 None:intergenic 55.0%
GACACGAGAGGGAATAGAGG+TGG - chr2_4:64075752-64075771 None:intergenic 55.0%
TCCCTCTCGTGTCTGTAACC+AGG + chr2_4:64075759-64075778 Msa0342150:three_prime_UTR 55.0%
CGATCTTTAGGTCGAGGCCT+GGG - chr2_4:64076057-64076076 None:intergenic 55.0%
AGGGGCTACATGGGCATATG+AGG + chr2_4:64076583-64076602 Msa0342150:three_prime_UTR 55.0%
ACAGATGCTCTGCGAGGAAC+GGG + chr2_4:64076760-64076779 Msa0342150:intron 55.0%
CGAGGAACGGGGTTTCTTTC+TGG + chr2_4:64076772-64076791 Msa0342150:three_prime_UTR 55.0%
AAACAGGGACGTGACGAGGA+TGG + chr2_4:64077195-64077214 Msa0342150:three_prime_UTR 55.0%
TGCCAAATCCGAACGGGGAC+GGG + chr2_4:64073531-64073550 Msa0342150:CDS 60.0%
!! TTTGCCGGTTCTGCGCCGTT+TGG + chr2_4:64074884-64074903 Msa0342150:three_prime_UTR 60.0%
GCGATCTTTAGGTCGAGGCC+TGG - chr2_4:64076058-64076077 None:intergenic 60.0%
ACTTCGAGGGAGGGGCTACA+TGG + chr2_4:64076573-64076592 Msa0342150:three_prime_UTR 60.0%
CTTCGAGGGAGGGGCTACAT+GGG + chr2_4:64076574-64076593 Msa0342150:three_prime_UTR 60.0%
CAGATGCTCTGCGAGGAACG+GGG + chr2_4:64076761-64076780 Msa0342150:intron 60.0%
TCGTCACGTCCCTGTTTGCC+TGG - chr2_4:64077192-64077211 None:intergenic 60.0%
AGGCAAACAGGGACGTGACG+AGG + chr2_4:64077191-64077210 Msa0342150:intron 60.0%
AGGAGAGGGGTCATGCCGTG+TGG + chr2_4:64071661-64071680 Msa0342150:five_prime_UTR 65.0%
CTCCCGTCCCCGTTCGGATT+TGG - chr2_4:64073536-64073555 None:intergenic 65.0%
CGAGGCCTGGGATTCTCTCC+TGG - chr2_4:64076045-64076064 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 64071013 64078002 64071013 ID=Msa0342150;Name=Msa0342150
chr2_4 mRNA 64071013 64078002 64071013 ID=Msa0342150-mRNA-1;Parent=Msa0342150;Name=Msa0342150-mRNA-1;_AED=0.06;_eAED=0.06;_QI=735|1|1|1|0.6|0.54|11|3074|77
chr2_4 exon 64071013 64071115 64071013 ID=Msa0342150-mRNA-1:exon:20550;Parent=Msa0342150-mRNA-1
chr2_4 exon 64071220 64071949 64071220 ID=Msa0342150-mRNA-1:exon:20551;Parent=Msa0342150-mRNA-1
chr2_4 exon 64073454 64073668 64073454 ID=Msa0342150-mRNA-1:exon:20552;Parent=Msa0342150-mRNA-1
chr2_4 exon 64073768 64073849 64073768 ID=Msa0342150-mRNA-1:exon:20553;Parent=Msa0342150-mRNA-1
chr2_4 exon 64073978 64074019 64073978 ID=Msa0342150-mRNA-1:exon:20554;Parent=Msa0342150-mRNA-1
chr2_4 exon 64074104 64074163 64074104 ID=Msa0342150-mRNA-1:exon:20555;Parent=Msa0342150-mRNA-1
chr2_4 exon 64074502 64076134 64074502 ID=Msa0342150-mRNA-1:exon:20556;Parent=Msa0342150-mRNA-1
chr2_4 exon 64076241 64076342 64076241 ID=Msa0342150-mRNA-1:exon:20557;Parent=Msa0342150-mRNA-1
chr2_4 exon 64076536 64076676 64076536 ID=Msa0342150-mRNA-1:exon:20558;Parent=Msa0342150-mRNA-1
chr2_4 exon 64076764 64076888 64076764 ID=Msa0342150-mRNA-1:exon:20559;Parent=Msa0342150-mRNA-1
chr2_4 exon 64077193 64078002 64077193 ID=Msa0342150-mRNA-1:exon:20560;Parent=Msa0342150-mRNA-1
chr2_4 five_prime_UTR 64071013 64071115 64071013 ID=Msa0342150-mRNA-1:five_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 five_prime_UTR 64071220 64071851 64071220 ID=Msa0342150-mRNA-1:five_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 CDS 64071852 64071949 64071852 ID=Msa0342150-mRNA-1:cds;Parent=Msa0342150-mRNA-1
chr2_4 CDS 64073454 64073589 64073454 ID=Msa0342150-mRNA-1:cds;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64073590 64073668 64073590 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64073768 64073849 64073768 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64073978 64074019 64073978 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64074104 64074163 64074104 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64074502 64076134 64074502 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64076241 64076342 64076241 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64076536 64076676 64076536 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64076764 64076888 64076764 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
chr2_4 three_prime_UTR 64077193 64078002 64077193 ID=Msa0342150-mRNA-1:three_prime_utr;Parent=Msa0342150-mRNA-1
Gene Sequence

>Msa0342150

ATGGGTTTTCTGTTGAAAGAAGCTTTGAAGACTTTGTGTGGTAGGAATAATCAATGGTCTTATGCTGTGTTCTGGAAGATTGGTTGCAACAATTCTAAGCTATTGATTTGGGAAGAATGCTATTATGAACCCTTTTCTTGTCCTTCTCCTCATGACATTGTTGGGATGTCGAATTTGCCAAATCCGAACGGGGACGGGAGTTGTTTTCATCTGACTTTCAATCGCCTCATCTAG
Protein sequence

>Msa0342150

MGFLLKEALKTLCGRNNQWSYAVFWKIGCNNSKLLIWEECYYEPFSCPSPHDIVGMSNLPNPNGDGSCFHLTFNRLI*