AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0342140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0342140 MtrunA17_Chr2g0322001 94.081 642 38 0 6 647 240 881 0.0 1239
Msa0342140 MtrunA17_Chr4g0025571 61.111 684 212 18 4 645 248 919 0.0 729
Msa0342140 MtrunA17_Chr1g0188861 57.282 206 83 1 432 632 555 760 9.26e-68 236
Msa0342140 MtrunA17_Chr7g0261061 55.208 192 82 2 434 621 466 657 6.89e-57 204
Msa0342140 MtrunA17_Chr1g0184231 51.546 194 88 3 434 621 466 659 2.42e-54 197
Msa0342140 MtrunA17_Chr7g0239641 35.179 307 165 9 315 612 385 666 2.94e-43 165
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0342140 AT2G27230.2 51.852 405 134 10 247 644 293 643 1.05e-115 360
Msa0342140 AT2G27230.1 51.852 405 134 10 247 644 293 643 1.05e-115 360
Msa0342140 AT1G64625.3 52.113 213 85 3 413 625 302 497 1.59e-62 216
Msa0342140 AT1G64625.2 52.113 213 85 3 413 625 316 511 2.99e-62 216
Msa0342140 AT1G64625.1 52.113 213 85 3 413 625 326 521 3.36e-62 216
Msa0342140 AT1G06150.1 54.839 186 82 1 438 621 543 728 7.85e-60 214
Msa0342140 AT1G06150.2 54.255 188 82 2 438 621 543 730 4.13e-58 209
Msa0342140 AT2G31280.1 53.763 186 77 2 438 621 535 713 3.88e-56 203
Msa0342140 AT2G31280.3 49.754 203 76 2 438 621 535 730 2.68e-54 198
Msa0342140 AT2G31280.2 48.223 197 71 2 438 610 507 696 1.28e-48 182
Msa0342140 AT1G64625.4 52.174 115 47 3 403 517 308 414 1.74e-26 113

Find 237 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGGAACGGGGTTTCTTTC+TGG 0.043954 2_4:-64066038 Msa0342140:CDS
TTACAAATTTCTCCGCTTAA+AGG 0.138316 2_4:+64068052 None:intergenic
ATCTGTTGAAGCAAACTTAA+AGG 0.155305 2_4:+64067583 None:intergenic
TATGTCACTCGTTCGTCTTC+TGG 0.191823 2_4:-64065583 Msa0342140:CDS
CTTGAACGATTTCGCTAAAA+AGG 0.199495 2_4:-64068999 Msa0342140:five_prime_UTR
TTTCAGTTGAGAAATGTTTA+AGG 0.199782 2_4:+64067799 None:intergenic
GATACAGATAATGGAGAATA+TGG 0.202350 2_4:-64068315 Msa0342140:intron
ACATGGTTTCTTCTAAAGTA+TGG 0.227857 2_4:-64065454 Msa0342140:three_prime_UTR
TTTCATACTATTACGCCTTC+TGG 0.229094 2_4:+64065490 None:intergenic
TTCGAAGAATGGAGGTAAAA+TGG 0.247064 2_4:-64066991 Msa0342140:CDS
GAAGAAAAGCATATGCTTAA+TGG 0.251784 2_4:+64066541 None:intergenic
CCTCATGGAGTTGTTCAAAT+TGG 0.255390 2_4:-64068683 Msa0342140:five_prime_UTR
TGCAGAAAATAAGGTTAAAA+AGG 0.263551 2_4:-64067276 Msa0342140:CDS
GACTTGACAGGCTATTGATT+TGG 0.275588 2_4:-64069366 None:intergenic
AATTCAGATCTTGCATTATA+AGG 0.277652 2_4:+64067956 None:intergenic
GCATTAATTTCCCTTCAAAA+TGG 0.279606 2_4:+64065302 None:intergenic
CTCCCGTCCCCGTTCGGATT+TGG 0.283922 2_4:+64069277 None:intergenic
GGATGGAGTGTTTGAACATT+AGG 0.289307 2_4:+64068073 None:intergenic
TGAATCATTTGGCGATCTTT+AGG 0.293664 2_4:+64066744 None:intergenic
GCACAAGCTTCTTCATGTTT+AGG 0.295071 2_4:+64067413 None:intergenic
CCTTCTCCTCATGACATTGT+TGG 0.299044 2_4:-64069313 Msa0342140:five_prime_UTR
AATCTCACAATGACAAAATC+TGG 0.304426 2_4:-64065961 Msa0342140:CDS
GGAGGATAAAGTCTCTTCTT+TGG 0.321759 2_4:-64069209 Msa0342140:five_prime_UTR
AGATGGCAATGCAGAAAATA+AGG 0.330319 2_4:-64067285 Msa0342140:CDS
CAAGTCCAATCTGAGATTTC+AGG 0.333847 2_4:-64065388 Msa0342140:three_prime_UTR
GCTGACTTAATAAGAGGATT+AGG 0.334171 2_4:-64066010 Msa0342140:CDS
CAGAATAGTCTTTGGATAGA+AGG 0.341700 2_4:+64068237 None:intergenic
CTTTCTAACGAACGACTTGA+TGG 0.342724 2_4:-64068209 Msa0342140:five_prime_UTR
TTCAAATCTTCAACTATAAT+AGG 0.343311 2_4:+64066181 None:intergenic
AGCAGTACTTCATTACTTAG+AGG 0.348030 2_4:-64067737 Msa0342140:CDS
TCTGAATTCAACAACTTTGC+CGG 0.349536 2_4:-64067941 Msa0342140:CDS
TGACACGATCTTGAATCATT+TGG 0.349626 2_4:+64066733 None:intergenic
CCTGCATTCCAGCTGAAAAT+TGG 0.350465 2_4:+64068813 None:intergenic
GGTTTAATTTCCAGGCAAAC+AGG 0.350767 2_4:-64065629 Msa0342140:intron
TGATTGTAGCCTAAAATATA+TGG 0.361806 2_4:-64067888 Msa0342140:CDS
AAGTTTGGCAGAATAGTCTT+TGG 0.362772 2_4:+64068229 None:intergenic
ACTTGACAGGCTATTGATTT+GGG 0.364100 2_4:-64069365 None:intergenic
TAAATCACAACACCAACTTC+TGG 0.364944 2_4:+64065095 None:intergenic
TTGAGACCACCGCATCTAAT+AGG 0.365764 2_4:+64067153 None:intergenic
AAGCAATCGCGGACAAAACC+TGG 0.366355 2_4:+64067476 None:intergenic
CTTCTCCTCATGACATTGTT+GGG 0.369610 2_4:-64069312 Msa0342140:five_prime_UTR
GAAACAAAACGGGGAGTCTA+AGG 0.371559 2_4:-64066489 Msa0342140:intron
ACAGATGCTCTGCGAGGAAC+GGG 0.371901 2_4:-64066050 Msa0342140:intron
TTCATACTATTACGCCTTCT+GGG 0.372258 2_4:+64065491 None:intergenic
TACTGCTAGAACTCAGATTA+TGG 0.373318 2_4:+64067753 None:intergenic
AAGTCGTTCGTTAGAAAGTT+TGG 0.380967 2_4:+64068214 None:intergenic
GATAAACTATGACATGCTTC+AGG 0.402098 2_4:-64067555 Msa0342140:CDS
CTTGATGGACCTTCTACTTC+CGG 0.402994 2_4:-64068194 Msa0342140:five_prime_UTR
CAGCAAAATTTATCTGTAGC+TGG 0.404020 2_4:-64067863 Msa0342140:CDS
AAAAGGAAACATGTCAGAAC+AGG 0.404985 2_4:-64067259 Msa0342140:CDS
CGCAGCATGAGATGAATAAC+TGG 0.412065 2_4:+64068099 None:intergenic
AAATTAGCTGCAGATACTTT+CGG 0.415204 2_4:+64067650 None:intergenic
TCGAAGAATGGAGGTAAAAT+GGG 0.415300 2_4:-64066990 Msa0342140:CDS
GTCTTTGGATAGAAGGGCAT+TGG 0.416057 2_4:+64068244 None:intergenic
TTAGATTTGCAAACTTCATC+CGG 0.418152 2_4:+64066807 None:intergenic
CATGAAAATAGTGTTTCAAC+TGG 0.418499 2_4:-64066843 Msa0342140:CDS
TTGACCAAACGGCGCAGAAC+CGG 0.424878 2_4:+64067922 None:intergenic
CGCTGTCATCATAGATTGAA+TGG 0.431106 2_4:+64067439 None:intergenic
GCGATCTTTAGGTCGAGGCC+TGG 0.431725 2_4:+64066755 None:intergenic
CGAGGCCTGGGATTCTCTCC+TGG 0.433177 2_4:+64066768 None:intergenic
CTGTAGAAACTAGTTCTCTA+AGG 0.434757 2_4:-64066965 Msa0342140:CDS
GTATCTGCAGCTAATTTATC+CGG 0.438414 2_4:-64067644 Msa0342140:CDS
CTTATAATGTATGATGTTGT+TGG 0.443653 2_4:-64065196 Msa0342140:three_prime_UTR
CGATCTTTAGGTCGAGGCCT+GGG 0.444284 2_4:+64066756 None:intergenic
GTTATTCCTGTGCTTCCTCA+TGG 0.445486 2_4:-64068698 Msa0342140:five_prime_UTR
CGAATTTGCCAAATCCGAAC+GGG 0.446500 2_4:-64069285 Msa0342140:five_prime_UTR
TGCCAAATCCGAACGGGGAC+GGG 0.446546 2_4:-64069279 Msa0342140:five_prime_UTR
TTTGCCGGTTCTGCGCCGTT+TGG 0.447116 2_4:-64067926 Msa0342140:CDS
AATAATCTAGTCATTGTTGC+AGG 0.447908 2_4:-64069169 Msa0342140:five_prime_UTR
AACCAACTCCCGTCCCCGTT+CGG 0.449815 2_4:+64069271 None:intergenic
ATCCGAACGGGGACGGGAGT+TGG 0.451598 2_4:-64069273 Msa0342140:five_prime_UTR
CAAAATTACTGGACATAACC+TGG 0.451981 2_4:+64067033 None:intergenic
CCGACAAGCTGAAACAAAAC+GGG 0.452238 2_4:-64066499 Msa0342140:CDS
GAAGGCGTAATAGTATGAAA+TGG 0.456647 2_4:-64065487 Msa0342140:exon
TAGATAGATATTGAAGGGTA+TGG 0.457628 2_4:-64065061 Msa0342140:three_prime_UTR
TTGCGAGAAATTGTTCCAAA+TGG 0.459635 2_4:-64066705 Msa0342140:CDS
GAAATAGCTGACTTAATAAG+AGG 0.461322 2_4:-64066016 Msa0342140:CDS
CTTAGTTCGTGGTTGGAGAA+TGG 0.461994 2_4:-64066879 Msa0342140:CDS
CTATTCAGCACATGCTCCTC+GGG 0.463051 2_4:+64067509 None:intergenic
TAATAGGACAGACCATTGAT+TGG 0.464665 2_4:+64066197 None:intergenic
CGGCATGCTTTGTCACACTT+TGG 0.464677 2_4:+64066519 None:intergenic
TTCATTCCCAACTTGTGCTC+CGG 0.464972 2_4:+64067625 None:intergenic
TACACCCGAGCTGCAAGATC+AGG 0.467529 2_4:+64068270 None:intergenic
TAGAAGAGCAACAAAAGAAA+AGG 0.469343 2_4:+64065003 None:intergenic
TTTGCAAATCTAATCGCAAA+AGG 0.469963 2_4:-64066797 Msa0342140:CDS
GCCGACAAGCTGAAACAAAA+CGG 0.470331 2_4:-64066500 Msa0342140:CDS
AGAGCCTGATCTTGCAGCTC+GGG 0.470368 2_4:-64068274 Msa0342140:five_prime_UTR
ATGAGGAGAAGGACAAGAAA+AGG 0.471607 2_4:+64069324 None:intergenic
CTCTCAACTTAGTTCGTGGT+TGG 0.472291 2_4:-64066886 Msa0342140:CDS
AGGGGCTACATGGGCATATG+AGG 0.472884 2_4:-64066227 Msa0342140:CDS
AATTTATCCGGAGCACAAGT+TGG 0.476179 2_4:-64067632 Msa0342140:CDS
AAATATGTAGATTATTAGTA+AGG 0.476655 2_4:-64066284 Msa0342140:intron
CTCAGTTAATGAATCAATGT+TGG 0.477527 2_4:-64067210 Msa0342140:CDS
TGTGCTCAACAACCTCCATC+AGG 0.482072 2_4:-64067395 Msa0342140:CDS
CTAGTCATTGTTGCAGGTGA+AGG 0.483141 2_4:-64069163 Msa0342140:five_prime_UTR
ATTAGGCTTGACCATCTTGA+AGG 0.483432 2_4:-64065993 Msa0342140:CDS
ACTTCGAGGGAGGGGCTACA+TGG 0.485251 2_4:-64066237 Msa0342140:CDS
TAGGCTACAATCACTTTGAC+CGG 0.485287 2_4:+64067898 None:intergenic
GACTTTCAATCGCCTCATCT+AGG 0.486947 2_4:-64069241 Msa0342140:five_prime_UTR
TTAAACCAGGAGAGAATCCC+AGG 0.487794 2_4:-64066773 Msa0342140:CDS
TCTTTGGATAGAAGGGCATT+GGG 0.488427 2_4:+64068245 None:intergenic
TCTTGCAGAACAACATTGAC+GGG 0.491625 2_4:-64067092 Msa0342140:CDS
TTATTCATTCCACCATGTAC+CGG 0.494944 2_4:+64067710 None:intergenic
TCTGCGCCGTTTGGTCAATC+CGG 0.495707 2_4:-64067917 Msa0342140:CDS
ATTTATCCGGAGCACAAGTT+GGG 0.496673 2_4:-64067631 Msa0342140:CDS
GAAGGCACACCGGAAGTAGA+AGG 0.502426 2_4:+64068185 None:intergenic
GTGGCTCTCAACTTAGTTCG+TGG 0.508052 2_4:-64066890 Msa0342140:CDS
CAACATGGTATCAACTGCAT+TGG 0.508385 2_4:+64065530 None:intergenic
GAAAGACAACTTCGAGGGAG+GGG 0.510207 2_4:-64066245 Msa0342140:CDS
TATTAGTAAGGAAGGTGGGC+TGG 0.512994 2_4:-64066272 Msa0342140:CDS
ACAGACAGAAGCCTCAGCTT+CGG 0.514419 2_4:-64067776 Msa0342140:CDS
GTGTAGCATAGATGCACTGC+TGG 0.518476 2_4:-64066570 Msa0342140:CDS
GAAACTAGTTCTCTAAGGTC+TGG 0.518621 2_4:-64066960 Msa0342140:CDS
GAAATGGATCACTTGTTACA+TGG 0.518940 2_4:-64065471 Msa0342140:three_prime_UTR
TCTTCTGGAGCAAACGATGA+AGG 0.520773 2_4:-64065568 Msa0342140:CDS
CCACACCTAAAATATCAAAC+AGG 0.521298 2_4:+64067363 None:intergenic
ATGTAGATTATTAGTAAGGA+AGG 0.521838 2_4:-64066280 Msa0342140:intron
GCATAGATGCACTGCTGGAA+CGG 0.522741 2_4:-64066565 Msa0342140:CDS
CAGGTTTGAATCAAAATTTG+AGG 0.523488 2_4:+64067994 None:intergenic
AATAGGACAGACCATTGATT+GGG 0.524595 2_4:+64066198 None:intergenic
CTGGGCACGTTTCATTGTTG+AGG 0.525236 2_4:-64065942 Msa0342140:intron
CTTTGACCGGATTGACCAAA+CGG 0.526516 2_4:+64067911 None:intergenic
TTGCCAAATCCGAACGGGGA+CGG 0.527063 2_4:-64069280 Msa0342140:five_prime_UTR
ATCTTGCAGAACAACATTGA+CGG 0.527236 2_4:-64067093 Msa0342140:CDS
ATTTGGCGATCTTTAGGTCG+AGG 0.527631 2_4:+64066750 None:intergenic
AGCAAAATTTATCTGTAGCT+GGG 0.527889 2_4:-64067862 Msa0342140:CDS
ATGTCAGAACAGGGAGGCTA+CGG 0.528271 2_4:-64067249 Msa0342140:CDS
AAATTTCTCCGCTTAAAGGA+TGG 0.529927 2_4:+64068056 None:intergenic
TTCATTACTTAGAGGAATCC+CGG 0.530213 2_4:-64067729 Msa0342140:CDS
TCCACTCCTTCAGTAGTCAA+TGG 0.531809 2_4:-64068131 Msa0342140:exon
CTTCGAGGGAGGGGCTACAT+GGG 0.531903 2_4:-64066236 Msa0342140:CDS
ACAAACTTCTGAAAGGCCAC+TGG 0.533098 2_4:-64067331 Msa0342140:CDS
AATGTAATGTAACACTTCCA+AGG 0.533568 2_4:+64064969 None:intergenic
CAAAGATTAAGAATATGTAT+TGG 0.534225 2_4:-64065259 Msa0342140:three_prime_UTR
CTGATGTATTACTCGACTCT+CGG 0.535979 2_4:-64065161 Msa0342140:three_prime_UTR
ACTCAGTATAATTGGACGCT+CGG 0.538400 2_4:-64069050 Msa0342140:intron
TCTCAGATTGGACTTGATGT+TGG 0.538444 2_4:+64065395 None:intergenic
TACAGATGCTCTGCGAGGAA+CGG 0.540617 2_4:-64066051 Msa0342140:intron
GATGTATAGATAGATATTGA+AGG 0.541631 2_4:-64065067 Msa0342140:three_prime_UTR
GCTACATGGGCATATGAGGT+TGG 0.541843 2_4:-64066223 Msa0342140:CDS
TATTCATTCCACCATGTACC+GGG 0.541957 2_4:+64067711 None:intergenic
TCCCTCTCGTGTCTGTAACC+AGG 0.542916 2_4:-64067051 Msa0342140:CDS
GACCGCCTGAAATCTCAGAT+TGG 0.544308 2_4:+64065383 None:intergenic
ACTATTCAGCACATGCTCCT+CGG 0.544373 2_4:+64067508 None:intergenic
ATACAGATAATGGAGAATAT+GGG 0.546525 2_4:-64068314 Msa0342140:intron
AACTGGATACTCTAAACGCC+CGG 0.547096 2_4:-64066826 Msa0342140:CDS
TGAAAGACAACTTCGAGGGA+GGG 0.547552 2_4:-64066246 Msa0342140:CDS
AGATTATTAGTAAGGAAGGT+GGG 0.548057 2_4:-64066276 Msa0342140:CDS
TTATAACTCTTTACCCCAGA+AGG 0.550517 2_4:-64065505 Msa0342140:CDS
AGAATAGTCTTTGGATAGAA+GGG 0.551317 2_4:+64068238 None:intergenic
TTGAAGGGAAATTAATGCGT+AGG 0.552017 2_4:-64065297 Msa0342140:three_prime_UTR
CTTAGAGGAATCCCGGTACA+TGG 0.555721 2_4:-64067722 Msa0342140:CDS
CTTCTACTCATAGTTCACCT+TGG 0.555772 2_4:-64064986 Msa0342140:three_prime_UTR
ATGCTCCTCGGGATTAAAAG+AGG 0.559685 2_4:+64067520 None:intergenic
CTGAATAGTGGTCATATCCC+AGG 0.560458 2_4:-64067494 Msa0342140:CDS
AGGTTTGAATCAAAATTTGA+GGG 0.560993 2_4:+64067995 None:intergenic
AAGAGCCTGATCTTGCAGCT+CGG 0.562421 2_4:-64068275 Msa0342140:five_prime_UTR
TGAGGTTGGATCCCAATCAA+TGG 0.564102 2_4:-64066209 Msa0342140:CDS
TGCTCCTCGGGATTAAAAGA+GGG 0.564320 2_4:+64067521 None:intergenic
TTAGGCTTGACCATCTTGAA+GGG 0.566362 2_4:-64065992 Msa0342140:CDS
TCAGATTATGGCCGAAGCTG+AGG 0.566634 2_4:+64067765 None:intergenic
TAGATTATTAGTAAGGAAGG+TGG 0.567992 2_4:-64066277 Msa0342140:CDS
GAGGAGCATGTGCTGAATAG+TGG 0.569550 2_4:-64067506 Msa0342140:CDS
GCCATTGACTACTGAAGGAG+TGG 0.569892 2_4:+64068130 None:intergenic
GTGGAATGAATAATCTTCTG+AGG 0.573129 2_4:-64067700 Msa0342140:CDS
TAGATTTGCAAACTTCATCC+GGG 0.573731 2_4:+64066808 None:intergenic
TTGAAGGGTATGGAAAGTAA+AGG 0.574260 2_4:-64065051 Msa0342140:three_prime_UTR
TATCAAACTACAACTGTATG+TGG 0.574384 2_4:-64066909 Msa0342140:CDS
AACAGGTCATCACCACCTGA+TGG 0.575030 2_4:+64067380 None:intergenic
ATCTCACAATGACAAAATCT+GGG 0.576987 2_4:-64065960 Msa0342140:CDS
AAATAGCTTCATACCTCAGG+TGG 0.577005 2_4:+64068971 None:intergenic
CTTCTGGAGCAAACGATGAA+GGG 0.580889 2_4:-64065567 Msa0342140:CDS
GAGAATCCACTCATGACTGT+TGG 0.582691 2_4:+64069021 None:intergenic
TAGTCATTGTTGCAGGTGAA+GGG 0.582750 2_4:-64069162 Msa0342140:intron
TTGAAAGACAACTTCGAGGG+AGG 0.586923 2_4:-64066247 Msa0342140:CDS
ACAGACACGAGAGGGAATAG+AGG 0.587810 2_4:+64067058 None:intergenic
CCAACAATGTCATGAGGAGA+AGG 0.588683 2_4:+64069313 None:intergenic
TCGAATTTGCCAAATCCGAA+CGG 0.589469 2_4:-64069286 Msa0342140:five_prime_UTR
TGAGGAGAAGGACAAGAAAA+GGG 0.594071 2_4:+64069325 None:intergenic
ATTAGATGCGGTGGTCTCAA+CGG 0.594503 2_4:-64067150 Msa0342140:CDS
TCTAAGGTCTGGTTGTAGCA+AGG 0.595216 2_4:-64066949 Msa0342140:CDS
GACTCTCGGATGACATGCAT+CGG 0.595528 2_4:-64065147 Msa0342140:three_prime_UTR
TCCTCTTGAATTCCTAGATG+AGG 0.600129 2_4:+64069229 None:intergenic
ACAACTCCATGAGGAAGCAC+AGG 0.602503 2_4:+64068692 None:intergenic
TTAGAGCCATTGACTACTGA+AGG 0.602801 2_4:+64068125 None:intergenic
ACCTGGTTACAGACACGAGA+GGG 0.603391 2_4:+64067050 None:intergenic
CAAACACTCCATCCTTTAAG+CGG 0.606233 2_4:-64068064 Msa0342140:CDS
TCATACTATTACGCCTTCTG+GGG 0.609124 2_4:+64065492 None:intergenic
ATGTATAGATAGATATTGAA+GGG 0.609844 2_4:-64065066 Msa0342140:three_prime_UTR
AAACAGGGACGTGACGAGGA+TGG 0.609914 2_4:-64065613 Msa0342140:CDS
CATTTACCAACAGTCATGAG+TGG 0.611726 2_4:-64069027 Msa0342140:five_prime_UTR
AGCAATCGCGGACAAAACCT+GGG 0.620218 2_4:+64067477 None:intergenic
ATTGGACTTGATGTTGGTCA+TGG 0.621538 2_4:+64065401 None:intergenic
AAGTGTGGTTTGTATGTCAG+TGG 0.624005 2_4:-64064916 Msa0342140:three_prime_UTR
GTTTAATTTCCAGGCAAACA+GGG 0.624691 2_4:-64065628 Msa0342140:intron
AGGCAAACAGGGACGTGACG+AGG 0.625256 2_4:-64065617 Msa0342140:CDS
AGACCACCTATTAGATGCGG+TGG 0.629292 2_4:-64067159 Msa0342140:CDS
TAGGCTTGACCATCTTGAAG+GGG 0.630049 2_4:-64065991 Msa0342140:CDS
CAACATCATACATTATAAGT+CGG 0.631070 2_4:+64065200 None:intergenic
CAGCAAACAGTTCATTCCAG+TGG 0.634863 2_4:+64067315 None:intergenic
TGGAATGAATAATCTTCTGA+GGG 0.634877 2_4:-64067699 Msa0342140:CDS
GCTCCTCGGGATTAAAAGAG+GGG 0.642751 2_4:+64067522 None:intergenic
TCTGGTTGTAGCAAGGATGA+TGG 0.643782 2_4:-64066942 Msa0342140:CDS
GCCTCATCTAGGAATTCAAG+AGG 0.643855 2_4:-64069230 Msa0342140:five_prime_UTR
CTGTTTGCTGATGAATCAGA+TGG 0.644360 2_4:-64067302 Msa0342140:CDS
TGTTCTGCAAGATATGTCAT+CGG 0.646847 2_4:+64067103 None:intergenic
GAACTTGAAACATTAACACA+AGG 0.646884 2_4:+64067821 None:intergenic
AAAGGAAACATGTCAGAACA+GGG 0.651075 2_4:-64067258 Msa0342140:CDS
AATCGCAAAAGGCTTAAACC+AGG 0.654235 2_4:-64066786 Msa0342140:CDS
CAGATGCTCTGCGAGGAACG+GGG 0.654507 2_4:-64066049 Msa0342140:CDS
TCCTCGTCAGATGCTAATCG+AGG 0.657027 2_4:-64066155 Msa0342140:intron
ATCAACAGACGAAGGCACAC+CGG 0.661430 2_4:+64068175 None:intergenic
AGGCTTGACCATCTTGAAGG+GGG 0.663169 2_4:-64065990 Msa0342140:CDS
AACTTGAAACATTAACACAA+GGG 0.669514 2_4:+64067822 None:intergenic
GACACGAGAGGGAATAGAGG+TGG 0.670577 2_4:+64067061 None:intergenic
GTCCAATCTGAGATTTCAGG+CGG 0.671742 2_4:-64065385 Msa0342140:three_prime_UTR
GACATCCCAACAATGTCATG+AGG 0.673648 2_4:+64069307 None:intergenic
AACAGACCACCTATTAGATG+CGG 0.674702 2_4:-64067162 Msa0342140:CDS
AGACCACCGCATCTAATAGG+TGG 0.676745 2_4:+64067156 None:intergenic
GGTTGTAGCAAGGATGATGG+TGG 0.679696 2_4:-64066939 Msa0342140:CDS
TAAAGAGTTATAACGCAACA+TGG 0.680308 2_4:+64065515 None:intergenic
AGGTCATCACCACCTGATGG+AGG 0.680497 2_4:+64067383 None:intergenic
CCAATTTGAACAACTCCATG+AGG 0.685991 2_4:+64068683 None:intergenic
TCATCTAGGAATTCAAGAGG+AGG 0.686619 2_4:-64069227 Msa0342140:five_prime_UTR
AATGAATCAATGTTGGACAG+TGG 0.691050 2_4:-64067203 Msa0342140:CDS
GAATTTGCCAAATCCGAACG+GGG 0.691735 2_4:-64069284 Msa0342140:five_prime_UTR
ACAGATGAATCAACAGACGA+AGG 0.702189 2_4:+64068167 None:intergenic
ATTCTTACAGATGCTCTGCG+AGG 0.703030 2_4:-64066056 Msa0342140:intron
GCTCAACAACCTCCATCAGG+TGG 0.707490 2_4:-64067392 Msa0342140:CDS
AGAGGAATCCCGGTACATGG+TGG 0.708832 2_4:-64067719 Msa0342140:CDS
CTTGCAGAACAACATTGACG+GGG 0.710281 2_4:-64067091 Msa0342140:CDS
GTAAATGTAAGCTCTAAGTG+TGG 0.710396 2_4:-64064931 Msa0342140:three_prime_UTR
ACCTCGATTAGCATCTGACG+AGG 0.714015 2_4:+64066154 None:intergenic
GTATGTCAGTGGAATCAAAG+AGG 0.714666 2_4:-64064905 Msa0342140:three_prime_UTR
CGACAAGCTGAAACAAAACG+GGG 0.733321 2_4:-64066498 Msa0342140:CDS
AACCTGGTTACAGACACGAG+AGG 0.743583 2_4:+64067049 None:intergenic
GGAAACATGTCAGAACAGGG+AGG 0.777184 2_4:-64067255 Msa0342140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCTTAAAAAAAAAATC+TGG + chr2_4:64067543-64067562 None:intergenic 10.0%
!! TATAGATATATAAAATTCTT+TGG - chr2_4:64068067-64068086 Msa0342140:CDS 10.0%
!! ATATAACATCAAATAATTTA+AGG + chr2_4:64068344-64068363 None:intergenic 10.0%
!! AAATTTAAGAAGAAACTTAT+TGG + chr2_4:64065298-64065317 None:intergenic 15.0%
!! ATAAAACTTTAACAAAGAAA+AGG + chr2_4:64065547-64065566 None:intergenic 15.0%
!!! AATTTTAATGATACAGATAA+TGG - chr2_4:64065861-64065880 Msa0342140:intron 15.0%
!! AAATATGTAGATTATTAGTA+AGG - chr2_4:64067901-64067920 Msa0342140:CDS 15.0%
!!! AACTTTTCTTATATATGAAA+TGG - chr2_4:64068368-64068387 Msa0342140:intron 15.0%
!!! TTTCAGTTTTGTATTTAATT+TGG - chr2_4:64069327-64069346 Msa0342140:five_prime_UTR 15.0%
!!! ATACTTTTATTATGCAAGTT+TGG - chr2_4:64065565-64065584 Msa0342140:CDS 20.0%
!! TTTAAAAACAAACTTCTGAA+AGG - chr2_4:64066847-64066866 Msa0342140:CDS 20.0%
!! TTCAAATCTTCAACTATAAT+AGG + chr2_4:64068007-64068026 None:intergenic 20.0%
!! TGCTAATAACATCAAAAATA+AGG + chr2_4:64068406-64068425 None:intergenic 20.0%
!! CAAAGATTAAGAATATGTAT+TGG - chr2_4:64068926-64068945 Msa0342140:intron 20.0%
!! ATGTATAGATAGATATTGAA+GGG - chr2_4:64069119-64069138 Msa0342140:intron 20.0%
!!! TTGCTTTTACTCAGTATAAT+TGG - chr2_4:64065127-64065146 Msa0342140:three_prime_UTR 25.0%
!!! AATACTAGTTTGCTCTTTTT+AGG - chr2_4:64065330-64065349 Msa0342140:three_prime_UTR 25.0%
!! TTTTATTATGCAAGTTTGGT+TGG - chr2_4:64065569-64065588 Msa0342140:CDS 25.0%
!! ATCTAGGATTATTCATGATT+TGG + chr2_4:64065711-64065730 None:intergenic 25.0%
!! ATTACCCAATCACAATATTT+TGG - chr2_4:64065749-64065768 Msa0342140:intron 25.0%
!!! ATACAGATAATGGAGAATAT+GGG - chr2_4:64065871-64065890 Msa0342140:intron 25.0%
!! GGAGAAATTTGTAATTTTCA+GGG - chr2_4:64066142-64066161 Msa0342140:intron 25.0%
! AGGTTTGAATCAAAATTTGA+GGG + chr2_4:64066193-64066212 None:intergenic 25.0%
! AATTCAGATCTTGCATTATA+AGG + chr2_4:64066232-64066251 None:intergenic 25.0%
! TGATTGTAGCCTAAAATATA+TGG - chr2_4:64066297-64066316 Msa0342140:intron 25.0%
! AACTTGAAACATTAACACAA+GGG + chr2_4:64066366-64066385 None:intergenic 25.0%
! TTTCAGTTGAGAAATGTTTA+AGG + chr2_4:64066389-64066408 None:intergenic 25.0%
! TGCAGAAAATAAGGTTAAAA+AGG - chr2_4:64066909-64066928 Msa0342140:CDS 25.0%
!! TTATGTCCAGTAATTTTGAA+GGG - chr2_4:64067157-64067176 Msa0342140:CDS 25.0%
! AATGAGATAAGATATAAGAG+AGG + chr2_4:64067520-64067539 None:intergenic 25.0%
! AAACTTGTCTAGTTATGTTA+TGG - chr2_4:64067755-64067774 Msa0342140:CDS 25.0%
! ATGTAGATTATTAGTAAGGA+AGG - chr2_4:64067905-64067924 Msa0342140:CDS 25.0%
!!! AAGTTCGTGGTTTTTTTTTA+CGG - chr2_4:64068302-64068321 Msa0342140:five_prime_UTR 25.0%
!! AAATTACAAAAACTTTTCGC+TGG + chr2_4:64068440-64068459 None:intergenic 25.0%
! AAAATTAACATGCAAAAGAG+GGG + chr2_4:64068514-64068533 None:intergenic 25.0%
! CAAAATTAACATGCAAAAGA+GGG + chr2_4:64068515-64068534 None:intergenic 25.0%
! TCAAAATTAACATGCAAAAG+AGG + chr2_4:64068516-64068535 None:intergenic 25.0%
!! ATGTCATCTAAAATACTTTC+TGG - chr2_4:64068535-64068554 Msa0342140:intron 25.0%
!! ATATGTGAATCCATTTTGAA+GGG - chr2_4:64068873-64068892 Msa0342140:intron 25.0%
! CAACATCATACATTATAAGT+CGG + chr2_4:64068988-64069007 None:intergenic 25.0%
! CTTATAATGTATGATGTTGT+TGG - chr2_4:64068989-64069008 Msa0342140:five_prime_UTR 25.0%
! GATGTATAGATAGATATTGA+AGG - chr2_4:64069118-64069137 Msa0342140:intron 25.0%
AATAATCTAGTCATTGTTGC+AGG - chr2_4:64065016-64065035 Msa0342140:three_prime_UTR 30.0%
!! GACATGTTTTCTTGTTTCAA+TGG - chr2_4:64065087-64065106 Msa0342140:three_prime_UTR 30.0%
GAAATGCTTAGAACAAAAAG+TGG + chr2_4:64065418-64065437 None:intergenic 30.0%
TAACAAAGAAAAGGACTTAC+AGG + chr2_4:64065538-64065557 None:intergenic 30.0%
! GACAATTCAGTTTTCTGTAA+AGG - chr2_4:64065598-64065617 Msa0342140:CDS 30.0%
AAACCATTAATAGTTCGGTT+CGG - chr2_4:64065671-64065690 Msa0342140:intron 30.0%
!! ATTCATGATTTGGTTCAGAA+AGG + chr2_4:64065701-64065720 None:intergenic 30.0%
!! GATACAGATAATGGAGAATA+TGG - chr2_4:64065870-64065889 Msa0342140:intron 30.0%
AGAATAGTCTTTGGATAGAA+GGG + chr2_4:64065950-64065969 None:intergenic 30.0%
TTACAAATTTCTCCGCTTAA+AGG + chr2_4:64066136-64066155 None:intergenic 30.0%
! CGGAGAAATTTGTAATTTTC+AGG - chr2_4:64066141-64066160 Msa0342140:intron 30.0%
CAGGTTTGAATCAAAATTTG+AGG + chr2_4:64066194-64066213 None:intergenic 30.0%
! TTTGCTGCTCCATATATTTT+AGG + chr2_4:64066309-64066328 None:intergenic 30.0%
AGCAAAATTTATCTGTAGCT+GGG - chr2_4:64066323-64066342 Msa0342140:intron 30.0%
GAACTTGAAACATTAACACA+AGG + chr2_4:64066367-64066386 None:intergenic 30.0%
TGGAATGAATAATCTTCTGA+GGG - chr2_4:64066486-64066505 Msa0342140:intron 30.0%
AAATTAGCTGCAGATACTTT+CGG + chr2_4:64066538-64066557 None:intergenic 30.0%
ATCTGTTGAAGCAAACTTAA+AGG + chr2_4:64066605-64066624 None:intergenic 30.0%
! GATGACCTGTTTGATATTTT+AGG - chr2_4:64066817-64066836 Msa0342140:CDS 30.0%
CTCAGTTAATGAATCAATGT+TGG - chr2_4:64066975-64066994 Msa0342140:CDS 30.0%
!! TCATCGGAATTTTGTTTCAA+AGG + chr2_4:64067069-64067088 None:intergenic 30.0%
! GTTATGTCCAGTAATTTTGA+AGG - chr2_4:64067156-64067175 Msa0342140:CDS 30.0%
!! TATGTCCAGTAATTTTGAAG+GGG - chr2_4:64067158-64067177 Msa0342140:CDS 30.0%
!! TTGTTAGGTTTTTCGAAGAA+TGG - chr2_4:64067183-64067202 Msa0342140:CDS 30.0%
TATCAAACTACAACTGTATG+TGG - chr2_4:64067276-64067295 Msa0342140:CDS 30.0%
CATGAAAATAGTGTTTCAAC+TGG - chr2_4:64067342-64067361 Msa0342140:CDS 30.0%
TTAGATTTGCAAACTTCATC+CGG + chr2_4:64067381-64067400 None:intergenic 30.0%
TTTGCAAATCTAATCGCAAA+AGG - chr2_4:64067388-64067407 Msa0342140:CDS 30.0%
!! GAAATTACTTTTGCTCCATT+TGG + chr2_4:64067498-64067517 None:intergenic 30.0%
! GAAGAAAAGCATATGCTTAA+TGG + chr2_4:64067647-64067666 None:intergenic 30.0%
TAGATTATTAGTAAGGAAGG+TGG - chr2_4:64067908-64067927 Msa0342140:CDS 30.0%
AGATTATTAGTAAGGAAGGT+GGG - chr2_4:64067909-64067928 Msa0342140:CDS 30.0%
ATCTCTATAATCTGTTTGCT+TGG - chr2_4:64068104-64068123 Msa0342140:CDS 30.0%
! GAAATAGCTGACTTAATAAG+AGG - chr2_4:64068169-64068188 Msa0342140:five_prime_UTR 30.0%
AATCTCACAATGACAAAATC+TGG - chr2_4:64068224-64068243 Msa0342140:five_prime_UTR 30.0%
ATCTCACAATGACAAAATCT+GGG - chr2_4:64068225-64068244 Msa0342140:five_prime_UTR 30.0%
TCTTATAGTGAAGACAACAT+CGG + chr2_4:64068487-64068506 None:intergenic 30.0%
!! TACTTTCTGGTTTAATTTCC+AGG - chr2_4:64068548-64068567 Msa0342140:intron 30.0%
TAAAGAGTTATAACGCAACA+TGG + chr2_4:64068673-64068692 None:intergenic 30.0%
!! ACATGGTTTCTTCTAAAGTA+TGG - chr2_4:64068731-64068750 Msa0342140:intron 30.0%
! CATATGTGAATCCATTTTGA+AGG - chr2_4:64068872-64068891 Msa0342140:intron 30.0%
GCATTAATTTCCCTTCAAAA+TGG + chr2_4:64068886-64068905 None:intergenic 30.0%
!! TAACCGAGTGTTTATTTTTC+TGG - chr2_4:64068956-64068975 Msa0342140:intron 30.0%
ACACCAGAAAAATAAACACT+CGG + chr2_4:64068962-64068981 None:intergenic 30.0%
!! AGTGTTTATTTTTCTGGTGT+TGG - chr2_4:64068962-64068981 Msa0342140:intron 30.0%
TAGATAGATATTGAAGGGTA+TGG - chr2_4:64069124-64069143 Msa0342140:intron 30.0%
TAGAAGAGCAACAAAAGAAA+AGG + chr2_4:64069185-64069204 None:intergenic 30.0%
AATGTAATGTAACACTTCCA+AGG + chr2_4:64069219-64069238 None:intergenic 30.0%
GGTAGGTACTTTATCATTGT+TGG - chr2_4:64065044-64065063 Msa0342140:three_prime_UTR 35.0%
AGGTACTTTATCATTGTTGG+AGG - chr2_4:64065047-64065066 Msa0342140:three_prime_UTR 35.0%
CTTGAACGATTTCGCTAAAA+AGG - chr2_4:64065186-64065205 Msa0342140:three_prime_UTR 35.0%
CAAAAATAGCTTCATACCTC+AGG + chr2_4:64065220-64065239 None:intergenic 35.0%
TATGCAAGTTTGGTTGGAAA+AGG - chr2_4:64065575-64065594 Msa0342140:CDS 35.0%
ATGCAAGTTTGGTTGGAAAA+GGG - chr2_4:64065576-64065595 Msa0342140:CDS 35.0%
! GTTTTCTGTAAAGGTAGTTC+TGG - chr2_4:64065607-64065626 Msa0342140:CDS 35.0%
! AAACACATAACTGGTCTGTT+CGG - chr2_4:64065640-64065659 Msa0342140:intron 35.0%
GGAGCAAACCATTAATAGTT+CGG - chr2_4:64065666-64065685 Msa0342140:intron 35.0%
AAACCGAACCGAACTATTAA+TGG + chr2_4:64065677-64065696 None:intergenic 35.0%
CCGACCAAAATATTGTGATT+GGG + chr2_4:64065756-64065775 None:intergenic 35.0%
!!! CCCAATCACAATATTTTGGT+CGG - chr2_4:64065753-64065772 Msa0342140:intron 35.0%
ACCGACCAAAATATTGTGAT+TGG + chr2_4:64065757-64065776 None:intergenic 35.0%
TGTTTAGCTGAGAGGAATAA+CGG + chr2_4:64065839-64065858 None:intergenic 35.0%
!! AAAATTGCTGTTTAGCTGAG+AGG + chr2_4:64065847-64065866 None:intergenic 35.0%
CAGAATAGTCTTTGGATAGA+AGG + chr2_4:64065951-64065970 None:intergenic 35.0%
AAGTTTGGCAGAATAGTCTT+TGG + chr2_4:64065959-64065978 None:intergenic 35.0%
AAGTCGTTCGTTAGAAAGTT+TGG + chr2_4:64065974-64065993 None:intergenic 35.0%
AAATTTCTCCGCTTAAAGGA+TGG + chr2_4:64066132-64066151 None:intergenic 35.0%
!! TAATTTTCAGGGTAGAGTTG+TGG - chr2_4:64066153-64066172 Msa0342140:intron 35.0%
TCTGAATTCAACAACTTTGC+CGG - chr2_4:64066244-64066263 Msa0342140:CDS 35.0%
CAGCAAAATTTATCTGTAGC+TGG - chr2_4:64066322-64066341 Msa0342140:intron 35.0%
TACTGCTAGAACTCAGATTA+TGG + chr2_4:64066435-64066454 None:intergenic 35.0%
AGCAGTACTTCATTACTTAG+AGG - chr2_4:64066448-64066467 Msa0342140:intron 35.0%
TTCATTACTTAGAGGAATCC+CGG - chr2_4:64066456-64066475 Msa0342140:intron 35.0%
TTATTCATTCCACCATGTAC+CGG + chr2_4:64066478-64066497 None:intergenic 35.0%
GTGGAATGAATAATCTTCTG+AGG - chr2_4:64066485-64066504 Msa0342140:intron 35.0%
GTATCTGCAGCTAATTTATC+CGG - chr2_4:64066541-64066560 Msa0342140:CDS 35.0%
GATAAACTATGACATGCTTC+AGG - chr2_4:64066630-64066649 Msa0342140:intron 35.0%
!! CATCTTTTTGAAAGCAATCG+CGG + chr2_4:64066723-64066742 None:intergenic 35.0%
CCACACCTAAAATATCAAAC+AGG + chr2_4:64066825-64066844 None:intergenic 35.0%
!! CCTGTTTGATATTTTAGGTG+TGG - chr2_4:64066822-64066841 Msa0342140:CDS 35.0%
AGATGGCAATGCAGAAAATA+AGG - chr2_4:64066900-64066919 Msa0342140:CDS 35.0%
AAAAGGAAACATGTCAGAAC+AGG - chr2_4:64066926-64066945 Msa0342140:CDS 35.0%
AAAGGAAACATGTCAGAACA+GGG - chr2_4:64066927-64066946 Msa0342140:CDS 35.0%
AATGAATCAATGTTGGACAG+TGG - chr2_4:64066982-64067001 Msa0342140:CDS 35.0%
!! ATTTTGTTTCAAAGGCGGTT+TGG + chr2_4:64067061-64067080 None:intergenic 35.0%
!! TCGGAATTTTGTTTCAAAGG+CGG + chr2_4:64067066-64067085 None:intergenic 35.0%
TGTTCTGCAAGATATGTCAT+CGG + chr2_4:64067085-64067104 None:intergenic 35.0%
ATCTTGCAGAACAACATTGA+CGG - chr2_4:64067092-64067111 Msa0342140:CDS 35.0%
CAAAATTACTGGACATAACC+TGG + chr2_4:64067155-64067174 None:intergenic 35.0%
!! ATGTCCAGTAATTTTGAAGG+GGG - chr2_4:64067159-64067178 Msa0342140:CDS 35.0%
!! AATTTTGAAGGGGGATTGTT+AGG - chr2_4:64067168-64067187 Msa0342140:CDS 35.0%
!! TTAGGTTTTTCGAAGAATGG+AGG - chr2_4:64067186-64067205 Msa0342140:CDS 35.0%
TTCGAAGAATGGAGGTAAAA+TGG - chr2_4:64067194-64067213 Msa0342140:CDS 35.0%
TCGAAGAATGGAGGTAAAAT+GGG - chr2_4:64067195-64067214 Msa0342140:CDS 35.0%
! CTGTAGAAACTAGTTCTCTA+AGG - chr2_4:64067220-64067239 Msa0342140:CDS 35.0%
TAGATTTGCAAACTTCATCC+GGG + chr2_4:64067380-64067399 None:intergenic 35.0%
TGAATCATTTGGCGATCTTT+AGG + chr2_4:64067444-64067463 None:intergenic 35.0%
TGACACGATCTTGAATCATT+TGG + chr2_4:64067455-64067474 None:intergenic 35.0%
TTGCGAGAAATTGTTCCAAA+TGG - chr2_4:64067480-64067499 Msa0342140:CDS 35.0%
!!! GACAAGTTTTTTGAGACATG+AGG + chr2_4:64067744-64067763 None:intergenic 35.0%
TGCACATACACACACAAATT+TGG - chr2_4:64067807-64067826 Msa0342140:CDS 35.0%
!! ACAGAGACACAAATTTGTTG+AGG - chr2_4:64067839-64067858 Msa0342140:CDS 35.0%
!!! GTTTTGAAAGACAACTTCGA+GGG - chr2_4:64067935-64067954 Msa0342140:CDS 35.0%
! AATAGGACAGACCATTGATT+GGG + chr2_4:64067990-64068009 None:intergenic 35.0%
TAATAGGACAGACCATTGAT+TGG + chr2_4:64067991-64068010 None:intergenic 35.0%
! GCTGACTTAATAAGAGGATT+AGG - chr2_4:64068175-64068194 Msa0342140:five_prime_UTR 35.0%
! TAGTCAGTACATGGCTTTTA+TGG + chr2_4:64068276-64068295 None:intergenic 35.0%
! CTTCAAGATTAGTCAGTACA+TGG + chr2_4:64068285-64068304 None:intergenic 35.0%
TTATAGTGAAGACAACATCG+GGG + chr2_4:64068485-64068504 None:intergenic 35.0%
CTTATAGTGAAGACAACATC+GGG + chr2_4:64068486-64068505 None:intergenic 35.0%
! GTTTAATTTCCAGGCAAACA+GGG - chr2_4:64068557-64068576 Msa0342140:intron 35.0%
TTATAACTCTTTACCCCAGA+AGG - chr2_4:64068680-64068699 Msa0342140:five_prime_UTR 35.0%
TTCATACTATTACGCCTTCT+GGG + chr2_4:64068697-64068716 None:intergenic 35.0%
TTTCATACTATTACGCCTTC+TGG + chr2_4:64068698-64068717 None:intergenic 35.0%
! GAAGGCGTAATAGTATGAAA+TGG - chr2_4:64068698-64068717 Msa0342140:five_prime_UTR 35.0%
! GAAATGGATCACTTGTTACA+TGG - chr2_4:64068714-64068733 Msa0342140:intron 35.0%
TTGAAGGGAAATTAATGCGT+AGG - chr2_4:64068888-64068907 Msa0342140:intron 35.0%
!!! ATGACATGCATCGGATTTTT+TGG - chr2_4:64069047-64069066 Msa0342140:five_prime_UTR 35.0%
!!! TGACATGCATCGGATTTTTT+GGG - chr2_4:64069048-64069067 Msa0342140:intron 35.0%
TAAATCACAACACCAACTTC+TGG + chr2_4:64069093-64069112 None:intergenic 35.0%
! TTGAAGGGTATGGAAAGTAA+AGG - chr2_4:64069134-64069153 Msa0342140:intron 35.0%
!! GTAAATGTAAGCTCTAAGTG+TGG - chr2_4:64069254-64069273 Msa0342140:five_prime_UTR 35.0%
TGAGGAGAAGGACAAGAAAA+GGG + chr2_4:64064863-64064882 None:intergenic 40.0%
ATGAGGAGAAGGACAAGAAA+AGG + chr2_4:64064864-64064883 None:intergenic 40.0%
CTTCTCCTCATGACATTGTT+GGG - chr2_4:64064873-64064892 Msa0342140:three_prime_UTR 40.0%
TCGAATTTGCCAAATCCGAA+CGG - chr2_4:64064899-64064918 Msa0342140:three_prime_UTR 40.0%
TCCTCTTGAATTCCTAGATG+AGG + chr2_4:64064959-64064978 None:intergenic 40.0%
TCATCTAGGAATTCAAGAGG+AGG - chr2_4:64064958-64064977 Msa0342140:three_prime_UTR 40.0%
GGAGGATAAAGTCTCTTCTT+TGG - chr2_4:64064976-64064995 Msa0342140:three_prime_UTR 40.0%
TAGTCATTGTTGCAGGTGAA+GGG - chr2_4:64065023-64065042 Msa0342140:three_prime_UTR 40.0%
ACTCAGTATAATTGGACGCT+CGG - chr2_4:64065135-64065154 Msa0342140:three_prime_UTR 40.0%
CATTTACCAACAGTCATGAG+TGG - chr2_4:64065158-64065177 Msa0342140:three_prime_UTR 40.0%
! TAAAAAGGCATATCCACCTG+AGG - chr2_4:64065201-64065220 Msa0342140:three_prime_UTR 40.0%
AAATAGCTTCATACCTCAGG+TGG + chr2_4:64065217-64065236 None:intergenic 40.0%
! ATGCATGACCAATTTTCAGC+TGG - chr2_4:64065364-64065383 Msa0342140:three_prime_UTR 40.0%
CCAATTTGAACAACTCCATG+AGG + chr2_4:64065505-64065524 None:intergenic 40.0%
CCTCATGGAGTTGTTCAAAT+TGG - chr2_4:64065502-64065521 Msa0342140:CDS 40.0%
!! CTGTAAAGGTAGTTCTGGTT+CGG - chr2_4:64065612-64065631 Msa0342140:CDS 40.0%
!! TCGGTTTGGAAACACATAAC+TGG - chr2_4:64065631-64065650 Msa0342140:intron 40.0%
TGTGATTGGGTAATAACGCA+AGG + chr2_4:64065743-64065762 None:intergenic 40.0%
!! TCTTTGGATAGAAGGGCATT+GGG + chr2_4:64065943-64065962 None:intergenic 40.0%
CTTTCTAACGAACGACTTGA+TGG - chr2_4:64065976-64065995 Msa0342140:CDS 40.0%
ACAGATGAATCAACAGACGA+AGG + chr2_4:64066021-64066040 None:intergenic 40.0%
! TTAGAGCCATTGACTACTGA+AGG + chr2_4:64066063-64066082 None:intergenic 40.0%
! GGATGGAGTGTTTGAACATT+AGG + chr2_4:64066115-64066134 None:intergenic 40.0%
CAAACACTCCATCCTTTAAG+CGG - chr2_4:64066121-64066140 Msa0342140:intron 40.0%
! AAGGAACTGAATGCTTTTGC+AGG + chr2_4:64066213-64066232 None:intergenic 40.0%
TAGGCTACAATCACTTTGAC+CGG + chr2_4:64066290-64066309 None:intergenic 40.0%
TATTCATTCCACCATGTACC+GGG + chr2_4:64066477-64066496 None:intergenic 40.0%
AATTTATCCGGAGCACAAGT+TGG - chr2_4:64066553-64066572 Msa0342140:CDS 40.0%
ATTTATCCGGAGCACAAGTT+GGG - chr2_4:64066554-64066573 Msa0342140:CDS 40.0%
CGCGATTGCTTTCAAAAAGA+TGG - chr2_4:64066721-64066740 Msa0342140:CDS 40.0%
CGCTGTCATCATAGATTGAA+TGG + chr2_4:64066749-64066768 None:intergenic 40.0%
GCACAAGCTTCTTCATGTTT+AGG + chr2_4:64066775-64066794 None:intergenic 40.0%
! CTGTTTGCTGATGAATCAGA+TGG - chr2_4:64066883-64066902 Msa0342140:CDS 40.0%
!!! TTGGACAGTGGCATTTTTTC+TGG - chr2_4:64066994-64067013 Msa0342140:CDS 40.0%
!!! TGGACAGTGGCATTTTTTCT+GGG - chr2_4:64066995-64067014 Msa0342140:CDS 40.0%
AACAGACCACCTATTAGATG+CGG - chr2_4:64067023-64067042 Msa0342140:CDS 40.0%
TCTTGCAGAACAACATTGAC+GGG - chr2_4:64067093-64067112 Msa0342140:CDS 40.0%
CAATCCCCCTTCAAAATTAC+TGG + chr2_4:64067166-64067185 None:intergenic 40.0%
!! GAAACTAGTTCTCTAAGGTC+TGG - chr2_4:64067225-64067244 Msa0342140:CDS 40.0%
AATCGCAAAAGGCTTAAACC+AGG - chr2_4:64067399-64067418 Msa0342140:CDS 40.0%
!!! GGTTTTGAAAGACAACTTCG+AGG - chr2_4:64067934-64067953 Msa0342140:CDS 40.0%
GATGCTAATCGAGGTAATGA+TGG - chr2_4:64068039-64068058 Msa0342140:CDS 40.0%
ATTAGGCTTGACCATCTTGA+AGG - chr2_4:64068192-64068211 Msa0342140:five_prime_UTR 40.0%
TTAGGCTTGACCATCTTGAA+GGG - chr2_4:64068193-64068212 Msa0342140:five_prime_UTR 40.0%
CTGACTAATCTTGAAGTTCG+TGG - chr2_4:64068289-64068308 Msa0342140:five_prime_UTR 40.0%
! GGTTTAATTTCCAGGCAAAC+AGG - chr2_4:64068556-64068575 Msa0342140:intron 40.0%
CAACATGGTATCAACTGCAT+TGG + chr2_4:64068658-64068677 None:intergenic 40.0%
TCATACTATTACGCCTTCTG+GGG + chr2_4:64068696-64068715 None:intergenic 40.0%
ATTGGACTTGATGTTGGTCA+TGG + chr2_4:64068787-64068806 None:intergenic 40.0%
TCTCAGATTGGACTTGATGT+TGG + chr2_4:64068793-64068812 None:intergenic 40.0%
! CAAGTCCAATCTGAGATTTC+AGG - chr2_4:64068797-64068816 Msa0342140:intron 40.0%
CTGATGTATTACTCGACTCT+CGG - chr2_4:64069024-64069043 Msa0342140:five_prime_UTR 40.0%
!!! GACATGCATCGGATTTTTTG+GGG - chr2_4:64069049-64069068 Msa0342140:intron 40.0%
CTTCTACTCATAGTTCACCT+TGG - chr2_4:64069199-64069218 Msa0342140:five_prime_UTR 40.0%
! AAGTGTGGTTTGTATGTCAG+TGG - chr2_4:64069269-64069288 Msa0342140:five_prime_UTR 40.0%
GTATGTCAGTGGAATCAAAG+AGG - chr2_4:64069280-64069299 Msa0342140:five_prime_UTR 40.0%
CCAACAATGTCATGAGGAGA+AGG + chr2_4:64064875-64064894 None:intergenic 45.0%
CCTTCTCCTCATGACATTGT+TGG - chr2_4:64064872-64064891 Msa0342140:three_prime_UTR 45.0%
GACATCCCAACAATGTCATG+AGG + chr2_4:64064881-64064900 None:intergenic 45.0%
CGAATTTGCCAAATCCGAAC+GGG - chr2_4:64064900-64064919 Msa0342140:three_prime_UTR 45.0%
GAATTTGCCAAATCCGAACG+GGG - chr2_4:64064901-64064920 Msa0342140:three_prime_UTR 45.0%
GACTTTCAATCGCCTCATCT+AGG - chr2_4:64064944-64064963 Msa0342140:three_prime_UTR 45.0%
GCCTCATCTAGGAATTCAAG+AGG - chr2_4:64064955-64064974 Msa0342140:three_prime_UTR 45.0%
CTAGTCATTGTTGCAGGTGA+AGG - chr2_4:64065022-64065041 Msa0342140:three_prime_UTR 45.0%
GAGAATCCACTCATGACTGT+TGG + chr2_4:64065167-64065186 None:intergenic 45.0%
CCTGCATTCCAGCTGAAAAT+TGG + chr2_4:64065375-64065394 None:intergenic 45.0%
! CCAATTTTCAGCTGGAATGC+AGG - chr2_4:64065372-64065391 Msa0342140:three_prime_UTR 45.0%
GTTATTCCTGTGCTTCCTCA+TGG - chr2_4:64065487-64065506 Msa0342140:exon 45.0%
!! AAGGTAGTTCTGGTTCGGTT+TGG - chr2_4:64065617-64065636 Msa0342140:CDS 45.0%
! CATAACTGGTCTGTTCGGTT+TGG - chr2_4:64065645-64065664 Msa0342140:intron 45.0%
CGCAAGGATATCACTGATCT+AGG + chr2_4:64065727-64065746 None:intergenic 45.0%
! GTCTTTGGATAGAAGGGCAT+TGG + chr2_4:64065944-64065963 None:intergenic 45.0%
! CTTGATGGACCTTCTACTTC+CGG - chr2_4:64065991-64066010 Msa0342140:CDS 45.0%
TCCACTCCTTCAGTAGTCAA+TGG - chr2_4:64066054-64066073 Msa0342140:intron 45.0%
CGCAGCATGAGATGAATAAC+TGG + chr2_4:64066089-64066108 None:intergenic 45.0%
!! TTTTCAGGGTAGAGTTGTGG+AGG - chr2_4:64066156-64066175 Msa0342140:CDS 45.0%
CTTTGACCGGATTGACCAAA+CGG + chr2_4:64066277-64066296 None:intergenic 45.0%
TTCATTCCCAACTTGTGCTC+CGG + chr2_4:64066563-64066582 None:intergenic 45.0%
TGCTCCTCGGGATTAAAAGA+GGG + chr2_4:64066667-64066686 None:intergenic 45.0%
ATGCTCCTCGGGATTAAAAG+AGG + chr2_4:64066668-64066687 None:intergenic 45.0%
ACTATTCAGCACATGCTCCT+CGG + chr2_4:64066680-64066699 None:intergenic 45.0%
CTGAATAGTGGTCATATCCC+AGG - chr2_4:64066691-64066710 Msa0342140:intron 45.0%
! ACAAACTTCTGAAAGGCCAC+TGG - chr2_4:64066854-64066873 Msa0342140:CDS 45.0%
CAGCAAACAGTTCATTCCAG+TGG + chr2_4:64066873-64066892 None:intergenic 45.0%
TTGAGACCACCGCATCTAAT+AGG + chr2_4:64067035-64067054 None:intergenic 45.0%
ATTAGATGCGGTGGTCTCAA+CGG - chr2_4:64067035-64067054 Msa0342140:CDS 45.0%
CTTGCAGAACAACATTGACG+GGG - chr2_4:64067094-64067113 Msa0342140:CDS 45.0%
! TCTAAGGTCTGGTTGTAGCA+AGG - chr2_4:64067236-64067255 Msa0342140:CDS 45.0%
TCTGGTTGTAGCAAGGATGA+TGG - chr2_4:64067243-64067262 Msa0342140:CDS 45.0%
CTCTCAACTTAGTTCGTGGT+TGG - chr2_4:64067299-64067318 Msa0342140:CDS 45.0%
CTTAGTTCGTGGTTGGAGAA+TGG - chr2_4:64067306-64067325 Msa0342140:CDS 45.0%
AACTGGATACTCTAAACGCC+CGG - chr2_4:64067359-64067378 Msa0342140:CDS 45.0%
TTAAACCAGGAGAGAATCCC+AGG - chr2_4:64067412-64067431 Msa0342140:CDS 45.0%
ATTTGGCGATCTTTAGGTCG+AGG + chr2_4:64067438-64067457 None:intergenic 45.0%
GCCGACAAGCTGAAACAAAA+CGG - chr2_4:64067685-64067704 Msa0342140:CDS 45.0%
!!! CCCGTTTTGTTTCAGCTTGT+CGG + chr2_4:64067689-64067708 None:intergenic 45.0%
CCGACAAGCTGAAACAAAAC+GGG - chr2_4:64067686-64067705 Msa0342140:CDS 45.0%
CGACAAGCTGAAACAAAACG+GGG - chr2_4:64067687-64067706 Msa0342140:CDS 45.0%
GAAACAAAACGGGGAGTCTA+AGG - chr2_4:64067696-64067715 Msa0342140:CDS 45.0%
! AAAACGGGGAGTCTAAGGTA+TGG - chr2_4:64067701-64067720 Msa0342140:CDS 45.0%
TATTAGTAAGGAAGGTGGGC+TGG - chr2_4:64067913-64067932 Msa0342140:CDS 45.0%
TTGAAAGACAACTTCGAGGG+AGG - chr2_4:64067938-64067957 Msa0342140:CDS 45.0%
TGAAAGACAACTTCGAGGGA+GGG - chr2_4:64067939-64067958 Msa0342140:CDS 45.0%
TGAGGTTGGATCCCAATCAA+TGG - chr2_4:64067976-64067995 Msa0342140:CDS 45.0%
ATTCTTACAGATGCTCTGCG+AGG - chr2_4:64068129-64068148 Msa0342140:exon 45.0%
TAGGCTTGACCATCTTGAAG+GGG - chr2_4:64068194-64068213 Msa0342140:five_prime_UTR 45.0%
TTCCATTACCCCCTTCAAGA+TGG + chr2_4:64068206-64068225 None:intergenic 45.0%
TATGTCACTCGTTCGTCTTC+TGG - chr2_4:64068602-64068621 Msa0342140:intron 45.0%
!! TCTTCTGGAGCAAACGATGA+AGG - chr2_4:64068617-64068636 Msa0342140:intron 45.0%
!! CTTCTGGAGCAAACGATGAA+GGG - chr2_4:64068618-64068637 Msa0342140:intron 45.0%
! GTCCAATCTGAGATTTCAGG+CGG - chr2_4:64068800-64068819 Msa0342140:intron 45.0%
!!! CATCGGATTTTTTGGGGAGA+TGG - chr2_4:64069055-64069074 Msa0342140:intron 45.0%
! TGGCGTAGTTTTCCAGAAGT+TGG - chr2_4:64069078-64069097 Msa0342140:intron 45.0%
CATTGTTGCAGGTGAAGGGT+AGG - chr2_4:64065027-64065046 Msa0342140:three_prime_UTR 50.0%
! ACAACTCCATGAGGAAGCAC+AGG + chr2_4:64065496-64065515 None:intergenic 50.0%
AAGAGCCTGATCTTGCAGCT+CGG - chr2_4:64065910-64065929 Msa0342140:intron 50.0%
! ATCAACAGACGAAGGCACAC+CGG + chr2_4:64066013-64066032 None:intergenic 50.0%
! GCCATTGACTACTGAAGGAG+TGG + chr2_4:64066058-64066077 None:intergenic 50.0%
ACAGACAGAAGCCTCAGCTT+CGG - chr2_4:64066409-64066428 Msa0342140:intron 50.0%
TCAGATTATGGCCGAAGCTG+AGG + chr2_4:64066423-64066442 None:intergenic 50.0%
CTTAGAGGAATCCCGGTACA+TGG - chr2_4:64066463-64066482 Msa0342140:intron 50.0%
! CATCCCCTCTTTTAATCCCG+AGG - chr2_4:64066660-64066679 Msa0342140:intron 50.0%
GCTCCTCGGGATTAAAAGAG+GGG + chr2_4:64066666-64066685 None:intergenic 50.0%
CTATTCAGCACATGCTCCTC+GGG + chr2_4:64066679-64066698 None:intergenic 50.0%
! GAGGAGCATGTGCTGAATAG+TGG - chr2_4:64066679-64066698 Msa0342140:intron 50.0%
AGCAATCGCGGACAAAACCT+GGG + chr2_4:64066711-64066730 None:intergenic 50.0%
AAGCAATCGCGGACAAAACC+TGG + chr2_4:64066712-64066731 None:intergenic 50.0%
TGTGCTCAACAACCTCCATC+AGG - chr2_4:64066790-64066809 Msa0342140:CDS 50.0%
AACAGGTCATCACCACCTGA+TGG + chr2_4:64066808-64066827 None:intergenic 50.0%
GGAAACATGTCAGAACAGGG+AGG - chr2_4:64066930-64066949 Msa0342140:CDS 50.0%
ATGTCAGAACAGGGAGGCTA+CGG - chr2_4:64066936-64066955 Msa0342140:CDS 50.0%
AGACCACCTATTAGATGCGG+TGG - chr2_4:64067026-64067045 Msa0342140:CDS 50.0%
AGACCACCGCATCTAATAGG+TGG + chr2_4:64067032-64067051 None:intergenic 50.0%
ACAGACACGAGAGGGAATAG+AGG + chr2_4:64067130-64067149 None:intergenic 50.0%
ACCTGGTTACAGACACGAGA+GGG + chr2_4:64067138-64067157 None:intergenic 50.0%
AACCTGGTTACAGACACGAG+AGG + chr2_4:64067139-64067158 None:intergenic 50.0%
! GGTTGTAGCAAGGATGATGG+TGG - chr2_4:64067246-64067265 Msa0342140:CDS 50.0%
GTGGCTCTCAACTTAGTTCG+TGG - chr2_4:64067295-64067314 Msa0342140:CDS 50.0%
GTGTAGCATAGATGCACTGC+TGG - chr2_4:64067615-64067634 Msa0342140:CDS 50.0%
GCATAGATGCACTGCTGGAA+CGG - chr2_4:64067620-64067639 Msa0342140:CDS 50.0%
CGGCATGCTTTGTCACACTT+TGG + chr2_4:64067669-64067688 None:intergenic 50.0%
GAAAGACAACTTCGAGGGAG+GGG - chr2_4:64067940-64067959 Msa0342140:CDS 50.0%
GCTACATGGGCATATGAGGT+TGG - chr2_4:64067962-64067981 Msa0342140:CDS 50.0%
TCCTCGTCAGATGCTAATCG+AGG - chr2_4:64068030-64068049 Msa0342140:CDS 50.0%
ACCTCGATTAGCATCTGACG+AGG + chr2_4:64068034-64068053 None:intergenic 50.0%
TACAGATGCTCTGCGAGGAA+CGG - chr2_4:64068134-64068153 Msa0342140:exon 50.0%
AGGCTTGACCATCTTGAAGG+GGG - chr2_4:64068195-64068214 Msa0342140:five_prime_UTR 50.0%
GACCATCTTGAAGGGGGTAA+TGG - chr2_4:64068201-64068220 Msa0342140:five_prime_UTR 50.0%
CTGGGCACGTTTCATTGTTG+AGG - chr2_4:64068243-64068262 Msa0342140:five_prime_UTR 50.0%
GACCGCCTGAAATCTCAGAT+TGG + chr2_4:64068805-64068824 None:intergenic 50.0%
GACTCTCGGATGACATGCAT+CGG - chr2_4:64069038-64069057 Msa0342140:five_prime_UTR 50.0%
!!! CGGATTTTTTGGGGAGATGG+TGG - chr2_4:64069058-64069077 Msa0342140:intron 50.0%
TTGCCAAATCCGAACGGGGA+CGG - chr2_4:64064905-64064924 Msa0342140:three_prime_UTR 55.0%
AGAGCCTGATCTTGCAGCTC+GGG - chr2_4:64065911-64065930 Msa0342140:intron 55.0%
TACACCCGAGCTGCAAGATC+AGG + chr2_4:64065918-64065937 None:intergenic 55.0%
! GAAGGCACACCGGAAGTAGA+AGG + chr2_4:64066003-64066022 None:intergenic 55.0%
TTGACCAAACGGCGCAGAAC+CGG + chr2_4:64066266-64066285 None:intergenic 55.0%
TCTGCGCCGTTTGGTCAATC+CGG - chr2_4:64066268-64066287 Msa0342140:CDS 55.0%
AGAGGAATCCCGGTACATGG+TGG - chr2_4:64066466-64066485 Msa0342140:intron 55.0%
GCTCAACAACCTCCATCAGG+TGG - chr2_4:64066793-64066812 Msa0342140:CDS 55.0%
AGGTCATCACCACCTGATGG+AGG + chr2_4:64066805-64066824 None:intergenic 55.0%
GACACGAGAGGGAATAGAGG+TGG + chr2_4:64067127-64067146 None:intergenic 55.0%
TCCCTCTCGTGTCTGTAACC+AGG - chr2_4:64067134-64067153 Msa0342140:CDS 55.0%
CGATCTTTAGGTCGAGGCCT+GGG + chr2_4:64067432-64067451 None:intergenic 55.0%
AGGGGCTACATGGGCATATG+AGG - chr2_4:64067958-64067977 Msa0342140:CDS 55.0%
ACAGATGCTCTGCGAGGAAC+GGG - chr2_4:64068135-64068154 Msa0342140:five_prime_UTR 55.0%
CGAGGAACGGGGTTTCTTTC+TGG - chr2_4:64068147-64068166 Msa0342140:five_prime_UTR 55.0%
AAACAGGGACGTGACGAGGA+TGG - chr2_4:64068572-64068591 Msa0342140:intron 55.0%
TGCCAAATCCGAACGGGGAC+GGG - chr2_4:64064906-64064925 Msa0342140:three_prime_UTR 60.0%
AACCAACTCCCGTCCCCGTT+CGG + chr2_4:64064917-64064936 None:intergenic 60.0%
!! TTTGCCGGTTCTGCGCCGTT+TGG - chr2_4:64066259-64066278 Msa0342140:CDS 60.0%
GCGATCTTTAGGTCGAGGCC+TGG + chr2_4:64067433-64067452 None:intergenic 60.0%
ACTTCGAGGGAGGGGCTACA+TGG - chr2_4:64067948-64067967 Msa0342140:CDS 60.0%
CTTCGAGGGAGGGGCTACAT+GGG - chr2_4:64067949-64067968 Msa0342140:CDS 60.0%
CAGATGCTCTGCGAGGAACG+GGG - chr2_4:64068136-64068155 Msa0342140:five_prime_UTR 60.0%
TCGTCACGTCCCTGTTTGCC+TGG + chr2_4:64068569-64068588 None:intergenic 60.0%
AGGCAAACAGGGACGTGACG+AGG - chr2_4:64068568-64068587 Msa0342140:intron 60.0%
CTCCCGTCCCCGTTCGGATT+TGG + chr2_4:64064911-64064930 None:intergenic 65.0%
ATCCGAACGGGGACGGGAGT+TGG - chr2_4:64064912-64064931 Msa0342140:three_prime_UTR 65.0%
CGAGGCCTGGGATTCTCTCC+TGG + chr2_4:64067420-64067439 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 64064827 64069380 64064827 ID=Msa0342140;Name=Msa0342140
chr2_4 mRNA 64064827 64069380 64064827 ID=Msa0342140-mRNA-1;Parent=Msa0342140;Name=Msa0342140-mRNA-1;_AED=0.08;_eAED=0.08;_QI=598|1|1|1|1|0.88|9|673|647
chr2_4 exon 64064827 64065637 64064827 ID=Msa0342140-mRNA-1:exon:20580;Parent=Msa0342140-mRNA-1
chr2_4 exon 64065943 64066068 64065943 ID=Msa0342140-mRNA-1:exon:20579;Parent=Msa0342140-mRNA-1
chr2_4 exon 64066156 64066296 64066156 ID=Msa0342140-mRNA-1:exon:20578;Parent=Msa0342140-mRNA-1
chr2_4 exon 64066490 64066591 64066490 ID=Msa0342140-mRNA-1:exon:20577;Parent=Msa0342140-mRNA-1
chr2_4 exon 64066698 64068330 64066698 ID=Msa0342140-mRNA-1:exon:20576;Parent=Msa0342140-mRNA-1
chr2_4 exon 64068670 64068729 64068670 ID=Msa0342140-mRNA-1:exon:20575;Parent=Msa0342140-mRNA-1
chr2_4 exon 64068814 64068855 64068814 ID=Msa0342140-mRNA-1:exon:20574;Parent=Msa0342140-mRNA-1
chr2_4 exon 64068985 64069066 64068985 ID=Msa0342140-mRNA-1:exon:20573;Parent=Msa0342140-mRNA-1
chr2_4 exon 64069163 64069380 64069163 ID=Msa0342140-mRNA-1:exon:20572;Parent=Msa0342140-mRNA-1
chr2_4 five_prime_UTR 64069163 64069380 64069163 ID=Msa0342140-mRNA-1:five_prime_utr;Parent=Msa0342140-mRNA-1
chr2_4 five_prime_UTR 64068985 64069066 64068985 ID=Msa0342140-mRNA-1:five_prime_utr;Parent=Msa0342140-mRNA-1
chr2_4 five_prime_UTR 64068814 64068855 64068814 ID=Msa0342140-mRNA-1:five_prime_utr;Parent=Msa0342140-mRNA-1
chr2_4 five_prime_UTR 64068670 64068729 64068670 ID=Msa0342140-mRNA-1:five_prime_utr;Parent=Msa0342140-mRNA-1
chr2_4 five_prime_UTR 64068135 64068330 64068135 ID=Msa0342140-mRNA-1:five_prime_utr;Parent=Msa0342140-mRNA-1
chr2_4 CDS 64066698 64068134 64066698 ID=Msa0342140-mRNA-1:cds;Parent=Msa0342140-mRNA-1
chr2_4 CDS 64066490 64066591 64066490 ID=Msa0342140-mRNA-1:cds;Parent=Msa0342140-mRNA-1
chr2_4 CDS 64066156 64066296 64066156 ID=Msa0342140-mRNA-1:cds;Parent=Msa0342140-mRNA-1
chr2_4 CDS 64065943 64066068 64065943 ID=Msa0342140-mRNA-1:cds;Parent=Msa0342140-mRNA-1
chr2_4 CDS 64065500 64065637 64065500 ID=Msa0342140-mRNA-1:cds;Parent=Msa0342140-mRNA-1
chr2_4 three_prime_UTR 64064827 64065499 64064827 ID=Msa0342140-mRNA-1:three_prime_utr;Parent=Msa0342140-mRNA-1
Gene Sequence

>Msa0342140

ATGGCTCTAATCACCAGTTATTCATCTCATGCTGCGAAGCCTAATGTTCAAACACTCCATCCTTTAAGCGGAGAAATTTGTAATTTTCAGGGTAGAGTTGTGGAGGCTAGAGTAATACCCTCAAATTTTGATTCAAACCTGCAAAAGCATTCAGTTCCTTATAATGCAAGATCTGAATTCAACAACTTTGCCGGTTCTGCGCCGTTTGGTCAATCCGGTCAAAGTGATTGTAGCCTAAAATATATGGAGCAGCAAAATTTATCTGTAGCTGGGAGTCAAGATCATGTTAACCCTTGTGTTAATGTTTCAAGTTCCTTAAACATTTCTCAACTGAAAACAGACAGAAGCCTCAGCTTCGGCCATAATCTGAGTTCTAGCAGTACTTCATTACTTAGAGGAATCCCGGTACATGGTGGAATGAATAATCTTCTGAGGGCAAATCTGATTACTAGCTCAAAATCACCGAAAGTATCTGCAGCTAATTTATCCGGAGCACAAGTTGGGAATGAACTTCAAAATAAAGATTTAACCTTTAAGTTTGCTTCAACAGATCAAAAGATAAACTATGACATGCTTCAGGCTCATAGCATCCCCTCTTTTAATCCCGAGGAGCATGTGCTGAATAGTGGTCATATCCCAGGTTTTGTCCGCGATTGCTTTCAAAAAGATGGTACCATTCAATCTATGATGACAGCGAATCCTAAACATGAAGAAGCTTGTGCTCAACAACCTCCATCAGGTGGTGATGACCTGTTTGATATTTTAGGTGTGGATTTTAAAAACAAACTTCTGAAAGGCCACTGGAATGAACTGTTTGCTGATGAATCAGATGGCAATGCAGAAAATAAGGTTAAAAAGGAAACATGTCAGAACAGGGAGGCTACGGCTTCTGATTGTTATTACTCAGTTAATGAATCAATGTTGGACAGTGGCATTTTTTCTGGGATGTCAACAGACCACCTATTAGATGCGGTGGTCTCAACGGCCAAACCGCCTTTGAAACAAAATTCCGATGACATATCTTGCAGAACAACATTGACGGGGAATAGTACCACCTCTATTCCCTCTCGTGTCTGTAACCAGGTTATGTCCAGTAATTTTGAAGGGGGATTGTTAGGTTTTTCGAAGAATGGAGGTAAAATGGGTGCTGTAGAAACTAGTTCTCTAAGGTCTGGTTGTAGCAAGGATGATGGTGGAAAATGCTATCAAACTACAACTGTATGTGGCTCTCAACTTAGTTCGTGGTTGGAGAATGGTAGCAATATGAAGCATGAAAATAGTGTTTCAACTGGATACTCTAAACGCCCGGATGAAGTTTGCAAATCTAATCGCAAAAGGCTTAAACCAGGAGAGAATCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTCAAAGAGTTGCGAGAAATTGTTCCAAATGGAGCAAAATGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGCTTTTCTTCCAAAGTGTGACAAAGCATGCCGACAAGCTGAAACAAAACGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGGCTGGTTTTGAAAGACAACTTCGAGGGAGGGGCTACATGGGCATATGAGGTTGGATCCCAATCAATGGTCTGTCCTATTATAGTTGAAGATTTGAATACTCCTCGTCAGATGCTAATCGAGATGCTCTGCGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATAAGAGGATTAGGCTTGACCATCTTGAAGGGGGTAATGGAATCTCACAATGACAAAATCTGGGCACGTTTCATTGTTGAGGCAAACAGGGACGTGACGAGGATGGAAATATTTATGTCACTCGTTCGTCTTCTGGAGCAAACGATGAAGGGTAATGCATCATCATCCAATGCAGTTGATACCATGTTGCGTTATAACTCTTTACCCCAGAAGGCGTAA
Protein sequence

>Msa0342140

MALITSYSSHAAKPNVQTLHPLSGEICNFQGRVVEARVIPSNFDSNLQKHSVPYNARSEFNNFAGSAPFGQSGQSDCSLKYMEQQNLSVAGSQDHVNPCVNVSSSLNISQLKTDRSLSFGHNLSSSSTSLLRGIPVHGGMNNLLRANLITSSKSPKVSAANLSGAQVGNELQNKDLTFKFASTDQKINYDMLQAHSIPSFNPEEHVLNSGHIPGFVRDCFQKDGTIQSMMTANPKHEEACAQQPPSGGDDLFDILGVDFKNKLLKGHWNELFADESDGNAENKVKKETCQNREATASDCYYSVNESMLDSGIFSGMSTDHLLDAVVSTAKPPLKQNSDDISCRTTLTGNSTTSIPSRVCNQVMSSNFEGGLLGFSKNGGKMGAVETSSLRSGCSKDDGGKCYQTTTVCGSQLSSWLENGSNMKHENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFFQSVTKHADKLKQNGESKIISKEGGLVLKDNFEGGATWAYEVGSQSMVCPIIVEDLNTPRQMLIEMLCEERGFFLEIADLIRGLGLTILKGVMESHNDKIWARFIVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAVDTMLRYNSLPQKA*