AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0259120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259120 MtrunA17_Chr2g0322001 90.023 882 52 2 1 847 1 881 0.0 1612
Msa0259120 MtrunA17_Chr4g0025571 59.722 936 269 22 1 845 1 919 0.0 983
Msa0259120 MtrunA17_Chr1g0188861 57.282 206 83 1 632 832 555 760 6.13e-66 235
Msa0259120 MtrunA17_Chr7g0261061 55.208 192 82 2 634 821 466 657 1.12e-55 204
Msa0259120 MtrunA17_Chr1g0184231 51.546 194 88 3 634 821 466 659 2.61e-53 197
Msa0259120 MtrunA17_Chr1g0184231 29.767 215 112 9 1 207 1 184 8.01e-17 85.1
Msa0259120 MtrunA17_Chr7g0239641 35.179 307 165 9 515 812 385 666 1.14e-42 166
Msa0259120 MtrunA17_Chr7g0239641 28.378 222 121 9 5 207 6 208 1.28e-12 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259120 AT2G27230.2 51.852 405 134 10 447 844 293 643 5.67e-113 359
Msa0259120 AT2G27230.2 43.772 281 108 6 1 279 1 233 6.28e-60 216
Msa0259120 AT2G27230.1 51.852 405 134 10 447 844 293 643 5.67e-113 359
Msa0259120 AT2G27230.1 43.772 281 108 6 1 279 1 233 6.28e-60 216
Msa0259120 AT1G64625.3 51.121 223 90 4 603 825 294 497 4.07e-61 216
Msa0259120 AT1G64625.2 51.121 223 90 4 603 825 308 511 8.38e-61 215
Msa0259120 AT1G64625.1 51.121 223 90 4 603 825 318 521 8.99e-61 215
Msa0259120 AT1G06150.1 54.839 186 82 1 638 821 543 728 2.13e-58 213
Msa0259120 AT1G06150.2 54.255 188 82 2 638 821 543 730 1.20e-56 208
Msa0259120 AT2G31280.1 53.763 186 77 2 638 821 535 713 5.56e-55 203
Msa0259120 AT2G31280.3 49.754 203 76 2 638 821 535 730 3.97e-53 198
Msa0259120 AT2G31280.2 48.223 197 71 2 638 810 507 696 8.65e-48 182
Msa0259120 AT1G64625.4 52.174 115 47 3 603 717 308 414 3.29e-26 112

Find 269 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGGAACGGGGTTTCTTTC+TGG 0.043954 2_2:-55948468 Msa0259120:CDS
ATCTGTTGAAGCAAACTTAA+AGG 0.155305 2_2:+55950013 None:intergenic
TATGTCACTCGTTCGTCTTC+TGG 0.191823 2_2:-55948012 Msa0259120:CDS
CTTGAACGATTTCGCTAAAA+AGG 0.199495 2_2:-55951429 Msa0259120:CDS
TTTCAGTTGAGAAATGTTTA+AGG 0.199782 2_2:+55950229 None:intergenic
GATACAGATAATGGAGAATA+TGG 0.202350 2_2:-55950745 Msa0259120:CDS
TGGTTTCAGCTTCTGCTTCT+TGG 0.213460 2_2:+55953916 None:intergenic
ACATGGTTTCTTCTAAAGTA+TGG 0.227857 2_2:-55947883 Msa0259120:three_prime_UTR
TTTCATACTATTACGCCTTC+TGG 0.229094 2_2:+55947919 None:intergenic
TTCGAAGAATGGAGGTAAAA+TGG 0.247064 2_2:-55949421 Msa0259120:CDS
GAAGAAAAGCATATGCTTAA+TGG 0.251784 2_2:+55948971 None:intergenic
CCTCATGGAGTTGTTCAAAT+TGG 0.255390 2_2:-55951113 Msa0259120:intron
TGCAGAAAATAAGGTTAAAA+AGG 0.263551 2_2:-55949706 Msa0259120:CDS
GACTTGACAGGCTATTGATT+TGG 0.275588 2_2:-55951796 Msa0259120:intron
AATTCAGATCTTGCATTATA+AGG 0.277652 2_2:+55950386 None:intergenic
GCATTAATTTCCCTTCAAAA+TGG 0.279606 2_2:+55947731 None:intergenic
CTCCCGTCCCCGTTCGGATT+TGG 0.283922 2_2:+55951707 None:intergenic
TGAATCATTTGGCGATCTTT+AGG 0.293664 2_2:+55949174 None:intergenic
GCACAAGCTTCTTCATGTTT+AGG 0.295071 2_2:+55949843 None:intergenic
CCTTCTCCTCATGACATTGT+TGG 0.299044 2_2:-55951743 Msa0259120:CDS
AATCTCACAATGACAAAATC+TGG 0.304426 2_2:-55948391 Msa0259120:CDS
GGTTTCAGCTTCTGCTTCTT+GGG 0.309514 2_2:+55953917 None:intergenic
GGAGGATAAAGTCTCTTCTT+TGG 0.321759 2_2:-55951639 Msa0259120:CDS
AGATGGCAATGCAGAAAATA+AGG 0.330319 2_2:-55949715 Msa0259120:CDS
CAAGTCCAATCTGAGATTTC+AGG 0.333847 2_2:-55947817 Msa0259120:three_prime_UTR
GCTGACTTAATAAGAGGATT+AGG 0.334171 2_2:-55948440 Msa0259120:CDS
CAGAATAGTCTTTGGATAGA+AGG 0.341700 2_2:+55950667 None:intergenic
CTTTCTAACGAACGACTTGA+TGG 0.342724 2_2:-55950639 Msa0259120:CDS
TTCAAATCTTCAACTATAAT+AGG 0.343311 2_2:+55948611 None:intergenic
AGCAGTACTTCATTACTTAG+AGG 0.348030 2_2:-55950167 Msa0259120:CDS
TCTGAATTCAACAACTTTGC+CGG 0.349536 2_2:-55950371 Msa0259120:CDS
TGACACGATCTTGAATCATT+TGG 0.349626 2_2:+55949163 None:intergenic
CCTGCATTCCAGCTGAAAAT+TGG 0.350465 2_2:+55951243 None:intergenic
GGTTTAATTTCCAGGCAAAC+AGG 0.350767 2_2:-55948058 Msa0259120:intron
ATGCTTGTAGAGAGACAAAA+TGG 0.350886 2_2:+55953762 None:intergenic
CTCTCTAGAATTTCTTCAGC+TGG 0.350929 2_2:-55953671 Msa0259120:five_prime_UTR
TATGCTGTGTTCTGGAAGAT+TGG 0.358814 2_2:-55953332 Msa0259120:CDS
TGATTGTAGCCTAAAATATA+TGG 0.361806 2_2:-55950318 Msa0259120:CDS
AAGTTTGGCAGAATAGTCTT+TGG 0.362772 2_2:+55950659 None:intergenic
ACTTGACAGGCTATTGATTT+GGG 0.364100 2_2:-55951795 Msa0259120:intron
TAAATCACAACACCAACTTC+TGG 0.364944 2_2:+55947524 None:intergenic
TTGAGACCACCGCATCTAAT+AGG 0.365764 2_2:+55949583 None:intergenic
GGTCATGCCGTGTGGTAGTT+AGG 0.366207 2_2:-55953576 Msa0259120:five_prime_UTR
AAGCAATCGCGGACAAAACC+TGG 0.366355 2_2:+55949906 None:intergenic
CTTCTCCTCATGACATTGTT+GGG 0.369610 2_2:-55951742 Msa0259120:CDS
GCCGTGTGGTAGTTAGGATT+TGG 0.370320 2_2:-55953570 Msa0259120:five_prime_UTR
TTTCAACAGAAAACCCATCT+TGG 0.370895 2_2:+55953397 None:intergenic
GAAACAAAACGGGGAGTCTA+AGG 0.371559 2_2:-55948919 Msa0259120:intron
ACAGATGCTCTGCGAGGAAC+GGG 0.371901 2_2:-55948480 Msa0259120:intron
TTCATACTATTACGCCTTCT+GGG 0.372258 2_2:+55947920 None:intergenic
TACTGCTAGAACTCAGATTA+TGG 0.373318 2_2:+55950183 None:intergenic
AAGTCGTTCGTTAGAAAGTT+TGG 0.380967 2_2:+55950644 None:intergenic
GATAAACTATGACATGCTTC+AGG 0.402098 2_2:-55949985 Msa0259120:CDS
CTTGATGGACCTTCTACTTC+CGG 0.402994 2_2:-55950624 Msa0259120:CDS
CAGCAAAATTTATCTGTAGC+TGG 0.404020 2_2:-55950293 Msa0259120:CDS
AAAAGGAAACATGTCAGAAC+AGG 0.404985 2_2:-55949689 Msa0259120:CDS
AGAATTTCTTCAGCTGGAAA+TGG 0.405706 2_2:-55953665 Msa0259120:five_prime_UTR
AAATTAGCTGCAGATACTTT+CGG 0.415204 2_2:+55950080 None:intergenic
TCGAAGAATGGAGGTAAAAT+GGG 0.415300 2_2:-55949420 Msa0259120:CDS
GTCTTTGGATAGAAGGGCAT+TGG 0.416057 2_2:+55950674 None:intergenic
TTAGATTTGCAAACTTCATC+CGG 0.418152 2_2:+55949237 None:intergenic
CATGAAAATAGTGTTTCAAC+TGG 0.418499 2_2:-55949273 Msa0259120:CDS
TTGACCAAACGGCGCAGAAC+CGG 0.424878 2_2:+55950352 None:intergenic
CGCTGTCATCATAGATTGAA+TGG 0.431106 2_2:+55949869 None:intergenic
GCGATCTTTAGGTCGAGGCC+TGG 0.431725 2_2:+55949185 None:intergenic
CGAGGCCTGGGATTCTCTCC+TGG 0.433177 2_2:+55949198 None:intergenic
CTGTAGAAACTAGTTCTCTA+AGG 0.434757 2_2:-55949395 Msa0259120:CDS
GTATCTGCAGCTAATTTATC+CGG 0.438414 2_2:-55950074 Msa0259120:CDS
AATGGTCTTATGCTGTGTTC+TGG 0.439007 2_2:-55953340 Msa0259120:CDS
CTTATAATGTATGATGTTGT+TGG 0.443653 2_2:-55947625 Msa0259120:three_prime_UTR
CGATCTTTAGGTCGAGGCCT+GGG 0.444284 2_2:+55949186 None:intergenic
GTTATTCCTGTGCTTCCTCA+TGG 0.445486 2_2:-55951128 Msa0259120:CDS
CGAATTTGCCAAATCCGAAC+GGG 0.446500 2_2:-55951715 Msa0259120:CDS
TGCCAAATCCGAACGGGGAC+GGG 0.446546 2_2:-55951709 Msa0259120:CDS
TTTGCCGGTTCTGCGCCGTT+TGG 0.447116 2_2:-55950356 Msa0259120:CDS
AATAATCTAGTCATTGTTGC+AGG 0.447908 2_2:-55951599 Msa0259120:CDS
AACCAACTCCCGTCCCCGTT+CGG 0.449815 2_2:+55951701 None:intergenic
ATCCGAACGGGGACGGGAGT+TGG 0.451598 2_2:-55951703 Msa0259120:CDS
CAAAATTACTGGACATAACC+TGG 0.451981 2_2:+55949463 None:intergenic
CCGACAAGCTGAAACAAAAC+GGG 0.452238 2_2:-55948929 Msa0259120:CDS
GAAGGCGTAATAGTATGAAA+TGG 0.456647 2_2:-55947916 Msa0259120:exon
TAGATAGATATTGAAGGGTA+TGG 0.457628 2_2:-55947490 Msa0259120:three_prime_UTR
TTGCGAGAAATTGTTCCAAA+TGG 0.459635 2_2:-55949135 Msa0259120:CDS
CTTTGAAGACTTTGTGTGGT+AGG 0.460879 2_2:-55953370 Msa0259120:CDS
GAAATAGCTGACTTAATAAG+AGG 0.461322 2_2:-55948446 Msa0259120:CDS
CTTAGTTCGTGGTTGGAGAA+TGG 0.461994 2_2:-55949309 Msa0259120:CDS
CTATTCAGCACATGCTCCTC+GGG 0.463051 2_2:+55949939 None:intergenic
TAATAGGACAGACCATTGAT+TGG 0.464665 2_2:+55948627 None:intergenic
CGGCATGCTTTGTCACACTT+TGG 0.464677 2_2:+55948949 None:intergenic
ATGAATGTGTGAGAATGAAA+TGG 0.464940 2_2:+55953819 None:intergenic
TTCATTCCCAACTTGTGCTC+CGG 0.464972 2_2:+55950055 None:intergenic
TACACCCGAGCTGCAAGATC+AGG 0.467529 2_2:+55950700 None:intergenic
TAGAAGAGCAACAAAAGAAA+AGG 0.469343 2_2:+55947432 None:intergenic
TTTGCAAATCTAATCGCAAA+AGG 0.469963 2_2:-55949227 Msa0259120:CDS
GCCGACAAGCTGAAACAAAA+CGG 0.470331 2_2:-55948930 Msa0259120:CDS
AGAGCCTGATCTTGCAGCTC+GGG 0.470368 2_2:-55950704 Msa0259120:CDS
ATGAGGAGAAGGACAAGAAA+AGG 0.471607 2_2:+55951754 None:intergenic
GGCATGCTGGAAACTGAACT+TGG 0.471730 2_2:-55953644 Msa0259120:five_prime_UTR
CTCTCAACTTAGTTCGTGGT+TGG 0.472291 2_2:-55949316 Msa0259120:CDS
AGGGGCTACATGGGCATATG+AGG 0.472884 2_2:-55948657 Msa0259120:CDS
AATTTATCCGGAGCACAAGT+TGG 0.476179 2_2:-55950062 Msa0259120:CDS
AAATATGTAGATTATTAGTA+AGG 0.476655 2_2:-55948714 Msa0259120:intron
CTCAGTTAATGAATCAATGT+TGG 0.477527 2_2:-55949640 Msa0259120:CDS
GAGAATGAAATGGAACTTGA+TGG 0.478547 2_2:+55953829 None:intergenic
TGTGCTCAACAACCTCCATC+AGG 0.482072 2_2:-55949825 Msa0259120:CDS
CTAGTCATTGTTGCAGGTGA+AGG 0.483141 2_2:-55951593 Msa0259120:CDS
ATTAGGCTTGACCATCTTGA+AGG 0.483432 2_2:-55948423 Msa0259120:CDS
CACTCAAGTGCTTCTGAAGA+GGG 0.484825 2_2:+55954148 None:intergenic
ACTTCGAGGGAGGGGCTACA+TGG 0.485251 2_2:-55948667 Msa0259120:CDS
TAGGCTACAATCACTTTGAC+CGG 0.485287 2_2:+55950328 None:intergenic
GACTTTCAATCGCCTCATCT+AGG 0.486947 2_2:-55951671 Msa0259120:CDS
TTAAACCAGGAGAGAATCCC+AGG 0.487794 2_2:-55949203 Msa0259120:CDS
TCTTTGGATAGAAGGGCATT+GGG 0.488427 2_2:+55950675 None:intergenic
TTCAGCTGGAAATGGCATGC+TGG 0.490441 2_2:-55953657 Msa0259120:five_prime_UTR
TCTTGCAGAACAACATTGAC+GGG 0.491625 2_2:-55949522 Msa0259120:CDS
TTATTCATTCCACCATGTAC+CGG 0.494944 2_2:+55950140 None:intergenic
TCTGCGCCGTTTGGTCAATC+CGG 0.495707 2_2:-55950347 Msa0259120:CDS
ATTTATCCGGAGCACAAGTT+GGG 0.496673 2_2:-55950061 Msa0259120:CDS
GTGTGGTTAGAGAAAGAGGA+AGG 0.497489 2_2:+55954002 None:intergenic
TTCTTTCTGACTCCCGACAC+TGG 0.499570 2_2:-55954179 Msa0259120:five_prime_UTR
GAAGGCACACCGGAAGTAGA+AGG 0.502426 2_2:+55950615 None:intergenic
TTCTTGGGTGAGTGTGGAAG+TGG 0.503835 2_2:+55953932 None:intergenic
CCCAAATTTAATGTCATCCT+CGG 0.506080 2_2:-55954039 Msa0259120:intron
GTGGCTCTCAACTTAGTTCG+TGG 0.508052 2_2:-55949320 Msa0259120:CDS
CAACATGGTATCAACTGCAT+TGG 0.508385 2_2:+55947959 None:intergenic
GAAAGACAACTTCGAGGGAG+GGG 0.510207 2_2:-55948675 Msa0259120:CDS
TATTAGTAAGGAAGGTGGGC+TGG 0.512994 2_2:-55948702 Msa0259120:CDS
ACAGACAGAAGCCTCAGCTT+CGG 0.514419 2_2:-55950206 Msa0259120:CDS
AGGGGTTATGAACCAGTGTC+GGG 0.516685 2_2:+55954167 None:intergenic
GTGTAGCATAGATGCACTGC+TGG 0.518476 2_2:-55949000 Msa0259120:CDS
GAAACTAGTTCTCTAAGGTC+TGG 0.518621 2_2:-55949390 Msa0259120:CDS
GAAATGGATCACTTGTTACA+TGG 0.518940 2_2:-55947900 Msa0259120:three_prime_UTR
TCTTCTGGAGCAAACGATGA+AGG 0.520773 2_2:-55947997 Msa0259120:CDS
CCACACCTAAAATATCAAAC+AGG 0.521298 2_2:+55949793 None:intergenic
ATGTAGATTATTAGTAAGGA+AGG 0.521838 2_2:-55948710 Msa0259120:intron
GCATAGATGCACTGCTGGAA+CGG 0.522741 2_2:-55948995 Msa0259120:CDS
CAGGTTTGAATCAAAATTTG+AGG 0.523488 2_2:+55950424 None:intergenic
AATAGGACAGACCATTGATT+GGG 0.524595 2_2:+55948628 None:intergenic
CTGGGCACGTTTCATTGTTG+AGG 0.525236 2_2:-55948372 Msa0259120:intron
TTCTGCTTCTTGGGTGAGTG+TGG 0.525238 2_2:+55953926 None:intergenic
CTTTGACCGGATTGACCAAA+CGG 0.526516 2_2:+55950341 None:intergenic
TTGCCAAATCCGAACGGGGA+CGG 0.527063 2_2:-55951710 Msa0259120:CDS
ATCTTGCAGAACAACATTGA+CGG 0.527236 2_2:-55949523 Msa0259120:CDS
ATTTGGCGATCTTTAGGTCG+AGG 0.527631 2_2:+55949180 None:intergenic
AGCAAAATTTATCTGTAGCT+GGG 0.527889 2_2:-55950292 Msa0259120:CDS
ATGTCAGAACAGGGAGGCTA+CGG 0.528271 2_2:-55949679 Msa0259120:CDS
TTCATTACTTAGAGGAATCC+CGG 0.530213 2_2:-55950159 Msa0259120:CDS
TTGTGTGTGGTTAGAGAAAG+AGG 0.531728 2_2:+55953998 None:intergenic
CTTCGAGGGAGGGGCTACAT+GGG 0.531903 2_2:-55948666 Msa0259120:CDS
ACAAACTTCTGAAAGGCCAC+TGG 0.533098 2_2:-55949761 Msa0259120:CDS
AATGTAATGTAACACTTCCA+AGG 0.533568 2_2:+55947398 None:intergenic
CAAAGATTAAGAATATGTAT+TGG 0.534225 2_2:-55947688 Msa0259120:three_prime_UTR
CTGATGTATTACTCGACTCT+CGG 0.535979 2_2:-55947590 Msa0259120:three_prime_UTR
ACTCAGTATAATTGGACGCT+CGG 0.538400 2_2:-55951480 Msa0259120:intron
TCTCAGATTGGACTTGATGT+TGG 0.538444 2_2:+55947824 None:intergenic
TACAGATGCTCTGCGAGGAA+CGG 0.540617 2_2:-55948481 Msa0259120:intron
GATGTATAGATAGATATTGA+AGG 0.541631 2_2:-55947496 Msa0259120:three_prime_UTR
GCTACATGGGCATATGAGGT+TGG 0.541843 2_2:-55948653 Msa0259120:CDS
TATTCATTCCACCATGTACC+GGG 0.541957 2_2:+55950141 None:intergenic
TCCCTCTCGTGTCTGTAACC+AGG 0.542916 2_2:-55949481 Msa0259120:CDS
GACCGCCTGAAATCTCAGAT+TGG 0.544308 2_2:+55947812 None:intergenic
ACTATTCAGCACATGCTCCT+CGG 0.544373 2_2:+55949938 None:intergenic
GAGGGGTTATGAACCAGTGT+CGG 0.545932 2_2:+55954166 None:intergenic
ATACAGATAATGGAGAATAT+GGG 0.546525 2_2:-55950744 Msa0259120:CDS
AACTGGATACTCTAAACGCC+CGG 0.547096 2_2:-55949256 Msa0259120:CDS
TGAAAGACAACTTCGAGGGA+GGG 0.547552 2_2:-55948676 Msa0259120:CDS
AGATTATTAGTAAGGAAGGT+GGG 0.548057 2_2:-55948706 Msa0259120:CDS
TTATAACTCTTTACCCCAGA+AGG 0.550517 2_2:-55947934 Msa0259120:CDS
AGAATAGTCTTTGGATAGAA+GGG 0.551317 2_2:+55950668 None:intergenic
TTGAAGGGAAATTAATGCGT+AGG 0.552017 2_2:-55947726 Msa0259120:three_prime_UTR
CTTAGAGGAATCCCGGTACA+TGG 0.555721 2_2:-55950152 Msa0259120:CDS
CTTCTACTCATAGTTCACCT+TGG 0.555772 2_2:-55947415 Msa0259120:three_prime_UTR
AGAACACAACAAGCAGGAAG+AGG 0.556473 2_2:-55953598 Msa0259120:five_prime_UTR
ATGCTCCTCGGGATTAAAAG+AGG 0.559685 2_2:+55949950 None:intergenic
CTGAATAGTGGTCATATCCC+AGG 0.560458 2_2:-55949924 Msa0259120:CDS
AGGTTTGAATCAAAATTTGA+GGG 0.560993 2_2:+55950425 None:intergenic
AAGAGCCTGATCTTGCAGCT+CGG 0.562421 2_2:-55950705 Msa0259120:CDS
TCACTCAAGTGCTTCTGAAG+AGG 0.563735 2_2:+55954147 None:intergenic
TGAGGTTGGATCCCAATCAA+TGG 0.564102 2_2:-55948639 Msa0259120:CDS
TGCTCCTCGGGATTAAAAGA+GGG 0.564320 2_2:+55949951 None:intergenic
TTAGGCTTGACCATCTTGAA+GGG 0.566362 2_2:-55948422 Msa0259120:CDS
TCAGATTATGGCCGAAGCTG+AGG 0.566634 2_2:+55950195 None:intergenic
TAGATTATTAGTAAGGAAGG+TGG 0.567992 2_2:-55948707 Msa0259120:CDS
GAGGAGCATGTGCTGAATAG+TGG 0.569550 2_2:-55949936 Msa0259120:CDS
GCCATTGACTACTGAAGGAG+TGG 0.569892 2_2:+55950560 None:intergenic
AGAACTTGCTTGAAAATGCA+TGG 0.571781 2_2:-55953524 Msa0259120:five_prime_UTR
GTGGAATGAATAATCTTCTG+AGG 0.573129 2_2:-55950130 Msa0259120:CDS
TAGATTTGCAAACTTCATCC+GGG 0.573731 2_2:+55949238 None:intergenic
TTGAAGGGTATGGAAAGTAA+AGG 0.574260 2_2:-55947480 Msa0259120:three_prime_UTR
TATCAAACTACAACTGTATG+TGG 0.574384 2_2:-55949339 Msa0259120:CDS
AACAGGTCATCACCACCTGA+TGG 0.575030 2_2:+55949810 None:intergenic
ATCTCACAATGACAAAATCT+GGG 0.576987 2_2:-55948390 Msa0259120:CDS
AAATAGCTTCATACCTCAGG+TGG 0.577005 2_2:+55951401 None:intergenic
CTTCTGGAGCAAACGATGAA+GGG 0.580889 2_2:-55947996 Msa0259120:CDS
GAGAATCCACTCATGACTGT+TGG 0.582691 2_2:+55951451 None:intergenic
TAGTCATTGTTGCAGGTGAA+GGG 0.582750 2_2:-55951592 Msa0259120:intron
TTGAAAGACAACTTCGAGGG+AGG 0.586923 2_2:-55948677 Msa0259120:CDS
ACAGACACGAGAGGGAATAG+AGG 0.587810 2_2:+55949488 None:intergenic
CCAACAATGTCATGAGGAGA+AGG 0.588683 2_2:+55951743 None:intergenic
TCGAATTTGCCAAATCCGAA+CGG 0.589469 2_2:-55951716 Msa0259120:CDS
AAGTGTTGAGTACTTGAGAG+AGG 0.590234 2_2:+55953861 None:intergenic
TGAGGAGAAGGACAAGAAAA+GGG 0.594071 2_2:+55951755 None:intergenic
ATTAGATGCGGTGGTCTCAA+CGG 0.594503 2_2:-55949580 Msa0259120:CDS
TCTAAGGTCTGGTTGTAGCA+AGG 0.595216 2_2:-55949379 Msa0259120:CDS
GACTCTCGGATGACATGCAT+CGG 0.595528 2_2:-55947576 Msa0259120:three_prime_UTR
GAGTTGTGTTGTGTTGTGTG+TGG 0.596496 2_2:+55953985 None:intergenic
AGAATGAAATGGAACTTGAT+GGG 0.596533 2_2:+55953830 None:intergenic
TCCTCTTGAATTCCTAGATG+AGG 0.600129 2_2:+55951659 None:intergenic
ACAACTCCATGAGGAAGCAC+AGG 0.602503 2_2:+55951122 None:intergenic
ACCTGGTTACAGACACGAGA+GGG 0.603391 2_2:+55949480 None:intergenic
TCATACTATTACGCCTTCTG+GGG 0.609124 2_2:+55947921 None:intergenic
ATGTATAGATAGATATTGAA+GGG 0.609844 2_2:-55947495 Msa0259120:three_prime_UTR
AAACAGGGACGTGACGAGGA+TGG 0.609914 2_2:-55948042 Msa0259120:CDS
CATTTACCAACAGTCATGAG+TGG 0.611726 2_2:-55951457 Msa0259120:CDS
TGTGGTTAGAGAAAGAGGAA+GGG 0.618008 2_2:+55954003 None:intergenic
AGCAATCGCGGACAAAACCT+GGG 0.620218 2_2:+55949907 None:intergenic
ATTGGACTTGATGTTGGTCA+TGG 0.621538 2_2:+55947830 None:intergenic
AAGTGTGGTTTGTATGTCAG+TGG 0.624005 2_2:-55947345 Msa0259120:three_prime_UTR
GTTTAATTTCCAGGCAAACA+GGG 0.624691 2_2:-55948057 Msa0259120:intron
AGGCAAACAGGGACGTGACG+AGG 0.625256 2_2:-55948046 Msa0259120:CDS
TGTGTGGTAGGAATAATCAA+TGG 0.625885 2_2:-55953358 Msa0259120:CDS
GAAGCTTTGAAGACTTTGTG+TGG 0.626478 2_2:-55953374 Msa0259120:CDS
CTCTACAAGCATGAATCTCG+TGG 0.628359 2_2:-55953751 Msa0259120:five_prime_UTR
GGGTTGAGAACACAACAAGC+AGG 0.628779 2_2:-55953604 Msa0259120:five_prime_UTR
AGACCACCTATTAGATGCGG+TGG 0.629292 2_2:-55949589 Msa0259120:CDS
TAGGCTTGACCATCTTGAAG+GGG 0.630049 2_2:-55948421 Msa0259120:CDS
CAACATCATACATTATAAGT+CGG 0.631070 2_2:+55947629 None:intergenic
CAGCAAACAGTTCATTCCAG+TGG 0.634863 2_2:+55949745 None:intergenic
TGGAATGAATAATCTTCTGA+GGG 0.634877 2_2:-55950129 Msa0259120:CDS
GCTCCTCGGGATTAAAAGAG+GGG 0.642751 2_2:+55949952 None:intergenic
TCTGGTTGTAGCAAGGATGA+TGG 0.643782 2_2:-55949372 Msa0259120:CDS
GCCTCATCTAGGAATTCAAG+AGG 0.643855 2_2:-55951660 Msa0259120:CDS
CTGTTTGCTGATGAATCAGA+TGG 0.644360 2_2:-55949732 Msa0259120:CDS
GAACACAACAAGCAGGAAGA+GGG 0.645343 2_2:-55953597 Msa0259120:five_prime_UTR
TGTTCTGCAAGATATGTCAT+CGG 0.646847 2_2:+55949533 None:intergenic
GAACTTGAAACATTAACACA+AGG 0.646884 2_2:+55950251 None:intergenic
AAAGGAAACATGTCAGAACA+GGG 0.651075 2_2:-55949688 Msa0259120:CDS
AATCGCAAAAGGCTTAAACC+AGG 0.654235 2_2:-55949216 Msa0259120:CDS
CAGATGCTCTGCGAGGAACG+GGG 0.654507 2_2:-55948479 Msa0259120:CDS
TCCTCGTCAGATGCTAATCG+AGG 0.657027 2_2:-55948585 Msa0259120:intron
ATCAACAGACGAAGGCACAC+CGG 0.661430 2_2:+55950605 None:intergenic
AGGCTTGACCATCTTGAAGG+GGG 0.663169 2_2:-55948420 Msa0259120:CDS
ACTCAAGTGCTTCTGAAGAG+GGG 0.663368 2_2:+55954149 None:intergenic
AACTTGAAACATTAACACAA+GGG 0.669514 2_2:+55950252 None:intergenic
GACACGAGAGGGAATAGAGG+TGG 0.670577 2_2:+55949491 None:intergenic
GTCCAATCTGAGATTTCAGG+CGG 0.671742 2_2:-55947814 Msa0259120:three_prime_UTR
GACATCCCAACAATGTCATG+AGG 0.673648 2_2:+55951737 None:intergenic
AACAGACCACCTATTAGATG+CGG 0.674702 2_2:-55949592 Msa0259120:CDS
AGACCACCGCATCTAATAGG+TGG 0.676745 2_2:+55949586 None:intergenic
GGTTGTAGCAAGGATGATGG+TGG 0.679696 2_2:-55949369 Msa0259120:CDS
TAAAGAGTTATAACGCAACA+TGG 0.680308 2_2:+55947944 None:intergenic
AGGTCATCACCACCTGATGG+AGG 0.680497 2_2:+55949813 None:intergenic
CCAATTTGAACAACTCCATG+AGG 0.685991 2_2:+55951113 None:intergenic
TCATCTAGGAATTCAAGAGG+AGG 0.686619 2_2:-55951657 Msa0259120:CDS
AATGAATCAATGTTGGACAG+TGG 0.691050 2_2:-55949633 Msa0259120:CDS
GAATTTGCCAAATCCGAACG+GGG 0.691735 2_2:-55951714 Msa0259120:CDS
AGGAAGAGGGTCATGCCGTG+TGG 0.700864 2_2:-55953584 Msa0259120:five_prime_UTR
ACAGATGAATCAACAGACGA+AGG 0.702189 2_2:+55950597 None:intergenic
ATTCTTACAGATGCTCTGCG+AGG 0.703030 2_2:-55948486 Msa0259120:intron
TCCAAATCCTAACTACCACA+CGG 0.705300 2_2:+55953569 None:intergenic
GCTCAACAACCTCCATCAGG+TGG 0.707490 2_2:-55949822 Msa0259120:CDS
AGAGGAATCCCGGTACATGG+TGG 0.708832 2_2:-55950149 Msa0259120:CDS
CTTGCAGAACAACATTGACG+GGG 0.710281 2_2:-55949521 Msa0259120:CDS
GTAAATGTAAGCTCTAAGTG+TGG 0.710396 2_2:-55947360 Msa0259120:three_prime_UTR
ACCTCGATTAGCATCTGACG+AGG 0.714015 2_2:+55948584 None:intergenic
GTATGTCAGTGGAATCAAAG+AGG 0.714666 2_2:-55947334 Msa0259120:three_prime_UTR
CGACAAGCTGAAACAAAACG+GGG 0.733321 2_2:-55948928 Msa0259120:CDS
AACCTGGTTACAGACACGAG+AGG 0.743583 2_2:+55949479 None:intergenic
GGAAACATGTCAGAACAGGG+AGG 0.777184 2_2:-55949685 Msa0259120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTCTAATTTCTAATTAA+GGG - chr2_2:55948303-55948322 Msa0259120:intron 10.0%
!!! ATTTTCTTAAAAAAAAAATC+TGG + chr2_2:55952419-55952438 None:intergenic 10.0%
!! TATAGATATATAAAATTCTT+TGG - chr2_2:55952943-55952962 Msa0259120:intron 10.0%
!! TATAACATCAAATAATTTAA+GGG + chr2_2:55953220-55953239 None:intergenic 10.0%
!! ATATAACATCAAATAATTTA+AGG + chr2_2:55953221-55953240 None:intergenic 10.0%
!! GATATTCTAATTTCTAATTA+AGG - chr2_2:55948302-55948321 Msa0259120:intron 15.0%
!!! ATTTGATTTATATTCTTACT+TGG - chr2_2:55949055-55949074 Msa0259120:intron 15.0%
!! AAATAAATACTATAAGATTC+TGG + chr2_2:55949137-55949156 None:intergenic 15.0%
!!! TTTTTTTAAAGTGGAAAATA+AGG + chr2_2:55949286-55949305 None:intergenic 15.0%
!! AAATTTAAGAAGAAACTTAT+TGG + chr2_2:55950174-55950193 None:intergenic 15.0%
!! ATAAAACTTTAACAAAGAAA+AGG + chr2_2:55950423-55950442 None:intergenic 15.0%
!!! AATTTTAATGATACAGATAA+TGG - chr2_2:55950737-55950756 Msa0259120:CDS 15.0%
!! AAATATGTAGATTATTAGTA+AGG - chr2_2:55952777-55952796 Msa0259120:intron 15.0%
!!! AACTTTTCTTATATATGAAA+TGG - chr2_2:55953245-55953264 Msa0259120:intron 15.0%
!!! TTTCAGTTTTGTATTTAATT+TGG - chr2_2:55954204-55954223 Msa0259120:five_prime_UTR 15.0%
!! TTGAAAAAAGATAAGAACTT+TGG + chr2_2:55947702-55947721 None:intergenic 20.0%
!!! AGTTCTTATCTTTTTTCAAA+TGG - chr2_2:55947703-55947722 Msa0259120:three_prime_UTR 20.0%
!! GAACAGAAAAAAAAACAAAA+GGG + chr2_2:55948012-55948031 None:intergenic 20.0%
!! AGAACAGAAAAAAAAACAAA+AGG + chr2_2:55948013-55948032 None:intergenic 20.0%
!!! AATTCTTTTTTCTCAGAAAA+TGG + chr2_2:55948054-55948073 None:intergenic 20.0%
!!! TTTTCTGAGAAAAAAGAATT+AGG - chr2_2:55948054-55948073 Msa0259120:intron 20.0%
!! CACAAAAAAAGAACAAAAAA+AGG + chr2_2:55948246-55948265 None:intergenic 20.0%
!! AAAACAACAAAGAAAGTAAA+CGG + chr2_2:55948374-55948393 None:intergenic 20.0%
!!! ATCAATTTTGACTTTTAAGT+CGG + chr2_2:55948606-55948625 None:intergenic 20.0%
!!! AAATTGATTTCAGTATGATT+TGG - chr2_2:55948618-55948637 Msa0259120:CDS 20.0%
!!! AATTGATTTCAGTATGATTT+GGG - chr2_2:55948619-55948638 Msa0259120:CDS 20.0%
!! TAGAAAATCAATTGAAACTT+TGG - chr2_2:55948858-55948877 Msa0259120:intron 20.0%
!! TACAAAATTTCTATTCACAT+TGG - chr2_2:55948952-55948971 Msa0259120:CDS 20.0%
!! AAAATAAAAGATCAAAGCAA+AGG + chr2_2:55949434-55949453 None:intergenic 20.0%
!!! AATCAAGAAGTTAATTTTAC+TGG + chr2_2:55949654-55949673 None:intergenic 20.0%
!!! ATACTTTTATTATGCAAGTT+TGG - chr2_2:55950441-55950460 Msa0259120:CDS 20.0%
!! TTTAAAAACAAACTTCTGAA+AGG - chr2_2:55951723-55951742 Msa0259120:CDS 20.0%
!! TTCAAATCTTCAACTATAAT+AGG + chr2_2:55952883-55952902 None:intergenic 20.0%
!! TGCTAATAACATCAAAAATA+AGG + chr2_2:55953283-55953302 None:intergenic 20.0%
!! CAAAGATTAAGAATATGTAT+TGG - chr2_2:55953803-55953822 Msa0259120:five_prime_UTR 20.0%
!! ATGTATAGATAGATATTGAA+GGG - chr2_2:55953996-55954015 Msa0259120:five_prime_UTR 20.0%
!!! TTGTTTTGTTTTGCTATGTT+TGG + chr2_2:55947275-55947294 None:intergenic 25.0%
! TAATGTCGTGACATTAAATT+TGG - chr2_2:55947370-55947389 Msa0259120:three_prime_UTR 25.0%
! AATGTCGTGACATTAAATTT+GGG - chr2_2:55947371-55947390 Msa0259120:three_prime_UTR 25.0%
!!! TTTGTGTTGCTTAAAAAAAC+AGG + chr2_2:55947603-55947622 None:intergenic 25.0%
! TTAAGGGTAATTACATGTTT+AGG - chr2_2:55948319-55948338 Msa0259120:intron 25.0%
! TAAGGGTAATTACATGTTTA+GGG - chr2_2:55948320-55948339 Msa0259120:intron 25.0%
! AAACAACAAAGAAAGTAAAC+GGG + chr2_2:55948373-55948392 None:intergenic 25.0%
!!! TCTTTGTTGTTTTGTTAATC+TGG - chr2_2:55948381-55948400 Msa0259120:CDS 25.0%
! TTAGTCCAAATTAACTTTGA+TGG - chr2_2:55948440-55948459 Msa0259120:CDS 25.0%
! ACATTCCATCAAAGTTAATT+TGG + chr2_2:55948448-55948467 None:intergenic 25.0%
! TGAAACTATAAGTGTATGTT+TGG - chr2_2:55948551-55948570 Msa0259120:intron 25.0%
!! ATTGATTTCAGTATGATTTG+GGG - chr2_2:55948620-55948639 Msa0259120:CDS 25.0%
! AAGCAAAATCAATTCTAATC+AGG + chr2_2:55948648-55948667 None:intergenic 25.0%
! ATTTATGTTTCTCCTGAAAA+TGG + chr2_2:55948801-55948820 None:intergenic 25.0%
!! GTTTGGATTATCAATGATTT+TGG + chr2_2:55948897-55948916 None:intergenic 25.0%
!! CTTTCTTGTTTGATTCTATT+TGG - chr2_2:55949260-55949279 Msa0259120:CDS 25.0%
!!! ACAACTCAGTTTTTTTAAAG+TGG + chr2_2:55949295-55949314 None:intergenic 25.0%
! TTGTGAGTTTGACAAAAATA+CGG + chr2_2:55949561-55949580 None:intergenic 25.0%
!!! TCCATTAGCTTTTTACTATA+CGG - chr2_2:55949615-55949634 Msa0259120:CDS 25.0%
!!! TTGCTTTTACTCAGTATAAT+TGG - chr2_2:55950003-55950022 Msa0259120:CDS 25.0%
!!! AATACTAGTTTGCTCTTTTT+AGG - chr2_2:55950206-55950225 Msa0259120:CDS 25.0%
!! TTTTATTATGCAAGTTTGGT+TGG - chr2_2:55950445-55950464 Msa0259120:CDS 25.0%
!! ATCTAGGATTATTCATGATT+TGG + chr2_2:55950587-55950606 None:intergenic 25.0%
!! ATTACCCAATCACAATATTT+TGG - chr2_2:55950625-55950644 Msa0259120:CDS 25.0%
!!! ATACAGATAATGGAGAATAT+GGG - chr2_2:55950747-55950766 Msa0259120:CDS 25.0%
!! GGAGAAATTTGTAATTTTCA+GGG - chr2_2:55951018-55951037 Msa0259120:intron 25.0%
! AGGTTTGAATCAAAATTTGA+GGG + chr2_2:55951069-55951088 None:intergenic 25.0%
! AATTCAGATCTTGCATTATA+AGG + chr2_2:55951108-55951127 None:intergenic 25.0%
! TGATTGTAGCCTAAAATATA+TGG - chr2_2:55951173-55951192 Msa0259120:intron 25.0%
! TTTCAGTTGAGAAATGTTTA+AGG + chr2_2:55951265-55951284 None:intergenic 25.0%
! TGCAGAAAATAAGGTTAAAA+AGG - chr2_2:55951785-55951804 Msa0259120:CDS 25.0%
!! TTATGTCCAGTAATTTTGAA+GGG - chr2_2:55952033-55952052 Msa0259120:intron 25.0%
! AATGAGATAAGATATAAGAG+AGG + chr2_2:55952396-55952415 None:intergenic 25.0%
! AAACTTGTCTAGTTATGTTA+TGG - chr2_2:55952631-55952650 Msa0259120:intron 25.0%
! ATGTAGATTATTAGTAAGGA+AGG - chr2_2:55952781-55952800 Msa0259120:intron 25.0%
!!! AAGTTCGTGGTTTTTTTTTA+CGG - chr2_2:55953178-55953197 Msa0259120:intron 25.0%
!! AAATTACAAAAACTTTTCGC+TGG + chr2_2:55953317-55953336 None:intergenic 25.0%
! AAAATTAACATGCAAAAGAG+GGG + chr2_2:55953391-55953410 None:intergenic 25.0%
! CAAAATTAACATGCAAAAGA+GGG + chr2_2:55953392-55953411 None:intergenic 25.0%
! TCAAAATTAACATGCAAAAG+AGG + chr2_2:55953393-55953412 None:intergenic 25.0%
!! ATGTCATCTAAAATACTTTC+TGG - chr2_2:55953412-55953431 Msa0259120:exon 25.0%
!! ATATGTGAATCCATTTTGAA+GGG - chr2_2:55953750-55953769 Msa0259120:five_prime_UTR 25.0%
! CAACATCATACATTATAAGT+CGG + chr2_2:55953865-55953884 None:intergenic 25.0%
! CTTATAATGTATGATGTTGT+TGG - chr2_2:55953866-55953885 Msa0259120:five_prime_UTR 25.0%
! GATGTATAGATAGATATTGA+AGG - chr2_2:55953995-55954014 Msa0259120:five_prime_UTR 25.0%
GTTGCTTAAAAAAACAGGTT+TGG + chr2_2:55947598-55947617 None:intergenic 30.0%
AGAATGAAATGGAACTTGAT+GGG + chr2_2:55947664-55947683 None:intergenic 30.0%
ATGAATGTGTGAGAATGAAA+TGG + chr2_2:55947675-55947694 None:intergenic 30.0%
TGAGAAAAAAGAATTAGGAG+TGG - chr2_2:55948059-55948078 Msa0259120:intron 30.0%
!!! GTTTTGAGAATTTCCAAGAT+GGG - chr2_2:55948081-55948100 Msa0259120:intron 30.0%
! TTTTGTTAATCTGGCAAAAC+TGG - chr2_2:55948390-55948409 Msa0259120:CDS 30.0%
! TCAAATTCACAACCATTTTC+AGG - chr2_2:55948786-55948805 Msa0259120:intron 30.0%
CAAGCATCAAATCAAATGTT+TGG + chr2_2:55948914-55948933 None:intergenic 30.0%
CTGAATATTCATTCTTCCTT+TGG - chr2_2:55949078-55949097 Msa0259120:intron 30.0%
TACAAAGCACAAAATTCCAA+AGG + chr2_2:55949097-55949116 None:intergenic 30.0%
!! TTGTTTTTCTTCAGCTAATC+AGG - chr2_2:55949311-55949330 Msa0259120:CDS 30.0%
! TGTTTTTCTTCAGCTAATCA+GGG - chr2_2:55949312-55949331 Msa0259120:CDS 30.0%
ACCGTATAGTAAAAAGCTAA+TGG + chr2_2:55949619-55949638 None:intergenic 30.0%
AATAATCTAGTCATTGTTGC+AGG - chr2_2:55949892-55949911 Msa0259120:CDS 30.0%
!! GACATGTTTTCTTGTTTCAA+TGG - chr2_2:55949963-55949982 Msa0259120:CDS 30.0%
GAAATGCTTAGAACAAAAAG+TGG + chr2_2:55950294-55950313 None:intergenic 30.0%
TAACAAAGAAAAGGACTTAC+AGG + chr2_2:55950414-55950433 None:intergenic 30.0%
! GACAATTCAGTTTTCTGTAA+AGG - chr2_2:55950474-55950493 Msa0259120:intron 30.0%
AAACCATTAATAGTTCGGTT+CGG - chr2_2:55950547-55950566 Msa0259120:intron 30.0%
!! ATTCATGATTTGGTTCAGAA+AGG + chr2_2:55950577-55950596 None:intergenic 30.0%
!! GATACAGATAATGGAGAATA+TGG - chr2_2:55950746-55950765 Msa0259120:CDS 30.0%
AGAATAGTCTTTGGATAGAA+GGG + chr2_2:55950826-55950845 None:intergenic 30.0%
TTACAAATTTCTCCGCTTAA+AGG + chr2_2:55951012-55951031 None:intergenic 30.0%
! CGGAGAAATTTGTAATTTTC+AGG - chr2_2:55951017-55951036 Msa0259120:intron 30.0%
CAGGTTTGAATCAAAATTTG+AGG + chr2_2:55951070-55951089 None:intergenic 30.0%
! TTTGCTGCTCCATATATTTT+AGG + chr2_2:55951185-55951204 None:intergenic 30.0%
AGCAAAATTTATCTGTAGCT+GGG - chr2_2:55951199-55951218 Msa0259120:intron 30.0%
TGGAATGAATAATCTTCTGA+GGG - chr2_2:55951362-55951381 Msa0259120:intron 30.0%
AAATTAGCTGCAGATACTTT+CGG + chr2_2:55951414-55951433 None:intergenic 30.0%
ATCTGTTGAAGCAAACTTAA+AGG + chr2_2:55951481-55951500 None:intergenic 30.0%
! GATGACCTGTTTGATATTTT+AGG - chr2_2:55951693-55951712 Msa0259120:CDS 30.0%
CTCAGTTAATGAATCAATGT+TGG - chr2_2:55951851-55951870 Msa0259120:intron 30.0%
!! TCATCGGAATTTTGTTTCAA+AGG + chr2_2:55951945-55951964 None:intergenic 30.0%
! GTTATGTCCAGTAATTTTGA+AGG - chr2_2:55952032-55952051 Msa0259120:intron 30.0%
!! TATGTCCAGTAATTTTGAAG+GGG - chr2_2:55952034-55952053 Msa0259120:intron 30.0%
!! TTGTTAGGTTTTTCGAAGAA+TGG - chr2_2:55952059-55952078 Msa0259120:intron 30.0%
TATCAAACTACAACTGTATG+TGG - chr2_2:55952152-55952171 Msa0259120:intron 30.0%
CATGAAAATAGTGTTTCAAC+TGG - chr2_2:55952218-55952237 Msa0259120:intron 30.0%
TTAGATTTGCAAACTTCATC+CGG + chr2_2:55952257-55952276 None:intergenic 30.0%
TTTGCAAATCTAATCGCAAA+AGG - chr2_2:55952264-55952283 Msa0259120:intron 30.0%
!! GAAATTACTTTTGCTCCATT+TGG + chr2_2:55952374-55952393 None:intergenic 30.0%
! GAAGAAAAGCATATGCTTAA+TGG + chr2_2:55952523-55952542 None:intergenic 30.0%
TAGATTATTAGTAAGGAAGG+TGG - chr2_2:55952784-55952803 Msa0259120:intron 30.0%
AGATTATTAGTAAGGAAGGT+GGG - chr2_2:55952785-55952804 Msa0259120:intron 30.0%
ATCTCTATAATCTGTTTGCT+TGG - chr2_2:55952980-55952999 Msa0259120:intron 30.0%
! GAAATAGCTGACTTAATAAG+AGG - chr2_2:55953045-55953064 Msa0259120:intron 30.0%
AATCTCACAATGACAAAATC+TGG - chr2_2:55953100-55953119 Msa0259120:intron 30.0%
ATCTCACAATGACAAAATCT+GGG - chr2_2:55953101-55953120 Msa0259120:intron 30.0%
TCTTATAGTGAAGACAACAT+CGG + chr2_2:55953364-55953383 None:intergenic 30.0%
!! TACTTTCTGGTTTAATTTCC+AGG - chr2_2:55953425-55953444 Msa0259120:five_prime_UTR 30.0%
TAAAGAGTTATAACGCAACA+TGG + chr2_2:55953550-55953569 None:intergenic 30.0%
!! ACATGGTTTCTTCTAAAGTA+TGG - chr2_2:55953608-55953627 Msa0259120:five_prime_UTR 30.0%
! CATATGTGAATCCATTTTGA+AGG - chr2_2:55953749-55953768 Msa0259120:five_prime_UTR 30.0%
GCATTAATTTCCCTTCAAAA+TGG + chr2_2:55953763-55953782 None:intergenic 30.0%
!! TAACCGAGTGTTTATTTTTC+TGG - chr2_2:55953833-55953852 Msa0259120:five_prime_UTR 30.0%
ACACCAGAAAAATAAACACT+CGG + chr2_2:55953839-55953858 None:intergenic 30.0%
!! AGTGTTTATTTTTCTGGTGT+TGG - chr2_2:55953839-55953858 Msa0259120:five_prime_UTR 30.0%
TAGATAGATATTGAAGGGTA+TGG - chr2_2:55954001-55954020 Msa0259120:five_prime_UTR 30.0%
TAGAAGAGCAACAAAAGAAA+AGG + chr2_2:55954062-55954081 None:intergenic 30.0%
AATGTAATGTAACACTTCCA+AGG + chr2_2:55954096-55954115 None:intergenic 30.0%
CCGAGGATGACATTAAATTT+GGG + chr2_2:55947455-55947474 None:intergenic 35.0%
CCCAAATTTAATGTCATCCT+CGG - chr2_2:55947452-55947471 Msa0259120:three_prime_UTR 35.0%
ACCGAGGATGACATTAAATT+TGG + chr2_2:55947456-55947475 None:intergenic 35.0%
GAGAATGAAATGGAACTTGA+TGG + chr2_2:55947665-55947684 None:intergenic 35.0%
ATGCTTGTAGAGAGACAAAA+TGG + chr2_2:55947732-55947751 None:intergenic 35.0%
AGAATTTCTTCAGCTGGAAA+TGG - chr2_2:55947826-55947845 Msa0259120:three_prime_UTR 35.0%
AACTTGGATCCAAAAAGAAG+TGG - chr2_2:55947863-55947882 Msa0259120:three_prime_UTR 35.0%
! AGAACTTGCTTGAAAATGCA+TGG - chr2_2:55947967-55947986 Msa0259120:CDS 35.0%
!!! GGTTTTGAGAATTTCCAAGA+TGG - chr2_2:55948080-55948099 Msa0259120:intron 35.0%
TTTCAACAGAAAACCCATCT+TGG + chr2_2:55948097-55948116 None:intergenic 35.0%
TGTGTGGTAGGAATAATCAA+TGG - chr2_2:55948133-55948152 Msa0259120:intron 35.0%
ATACATGCATGATGCATATC+TGG - chr2_2:55948485-55948504 Msa0259120:intron 35.0%
TTATTGTTCAGCTCACTTTG+AGG - chr2_2:55948741-55948760 Msa0259120:intron 35.0%
!! GGATTATCAATGATTTTGGC+AGG + chr2_2:55948893-55948912 None:intergenic 35.0%
GTGACCAATCAATAACACTT+CGG + chr2_2:55949025-55949044 None:intergenic 35.0%
!! ATTGATTGGTCACTGCTTTT+TGG - chr2_2:55949032-55949051 Msa0259120:intron 35.0%
CACAAGATAATCAATCCAGT+TGG + chr2_2:55949207-55949226 None:intergenic 35.0%
!! TACTACTGTGATTTTGGAGA+AGG - chr2_2:55949507-55949526 Msa0259120:CDS 35.0%
!! ACTTGACAGGCTATTGATTT+GGG - chr2_2:55949696-55949715 Msa0259120:CDS 35.0%
GGTAGGTACTTTATCATTGT+TGG - chr2_2:55949920-55949939 Msa0259120:CDS 35.0%
AGGTACTTTATCATTGTTGG+AGG - chr2_2:55949923-55949942 Msa0259120:CDS 35.0%
CTTGAACGATTTCGCTAAAA+AGG - chr2_2:55950062-55950081 Msa0259120:CDS 35.0%
CAAAAATAGCTTCATACCTC+AGG + chr2_2:55950096-55950115 None:intergenic 35.0%
TATGCAAGTTTGGTTGGAAA+AGG - chr2_2:55950451-55950470 Msa0259120:CDS 35.0%
ATGCAAGTTTGGTTGGAAAA+GGG - chr2_2:55950452-55950471 Msa0259120:CDS 35.0%
! GTTTTCTGTAAAGGTAGTTC+TGG - chr2_2:55950483-55950502 Msa0259120:intron 35.0%
! AAACACATAACTGGTCTGTT+CGG - chr2_2:55950516-55950535 Msa0259120:intron 35.0%
GGAGCAAACCATTAATAGTT+CGG - chr2_2:55950542-55950561 Msa0259120:intron 35.0%
AAACCGAACCGAACTATTAA+TGG + chr2_2:55950553-55950572 None:intergenic 35.0%
CCGACCAAAATATTGTGATT+GGG + chr2_2:55950632-55950651 None:intergenic 35.0%
!!! CCCAATCACAATATTTTGGT+CGG - chr2_2:55950629-55950648 Msa0259120:CDS 35.0%
ACCGACCAAAATATTGTGAT+TGG + chr2_2:55950633-55950652 None:intergenic 35.0%
TGTTTAGCTGAGAGGAATAA+CGG + chr2_2:55950715-55950734 None:intergenic 35.0%
!! AAAATTGCTGTTTAGCTGAG+AGG + chr2_2:55950723-55950742 None:intergenic 35.0%
CAGAATAGTCTTTGGATAGA+AGG + chr2_2:55950827-55950846 None:intergenic 35.0%
AAGTTTGGCAGAATAGTCTT+TGG + chr2_2:55950835-55950854 None:intergenic 35.0%
AAGTCGTTCGTTAGAAAGTT+TGG + chr2_2:55950850-55950869 None:intergenic 35.0%
AAATTTCTCCGCTTAAAGGA+TGG + chr2_2:55951008-55951027 None:intergenic 35.0%
!! TAATTTTCAGGGTAGAGTTG+TGG - chr2_2:55951029-55951048 Msa0259120:intron 35.0%
TCTGAATTCAACAACTTTGC+CGG - chr2_2:55951120-55951139 Msa0259120:CDS 35.0%
CAGCAAAATTTATCTGTAGC+TGG - chr2_2:55951198-55951217 Msa0259120:intron 35.0%
TACTGCTAGAACTCAGATTA+TGG + chr2_2:55951311-55951330 None:intergenic 35.0%
AGCAGTACTTCATTACTTAG+AGG - chr2_2:55951324-55951343 Msa0259120:intron 35.0%
TTCATTACTTAGAGGAATCC+CGG - chr2_2:55951332-55951351 Msa0259120:intron 35.0%
TTATTCATTCCACCATGTAC+CGG + chr2_2:55951354-55951373 None:intergenic 35.0%
GTGGAATGAATAATCTTCTG+AGG - chr2_2:55951361-55951380 Msa0259120:intron 35.0%
GTATCTGCAGCTAATTTATC+CGG - chr2_2:55951417-55951436 Msa0259120:CDS 35.0%
GATAAACTATGACATGCTTC+AGG - chr2_2:55951506-55951525 Msa0259120:intron 35.0%
!! CATCTTTTTGAAAGCAATCG+CGG + chr2_2:55951599-55951618 None:intergenic 35.0%
CCACACCTAAAATATCAAAC+AGG + chr2_2:55951701-55951720 None:intergenic 35.0%
!! CCTGTTTGATATTTTAGGTG+TGG - chr2_2:55951698-55951717 Msa0259120:CDS 35.0%
AGATGGCAATGCAGAAAATA+AGG - chr2_2:55951776-55951795 Msa0259120:CDS 35.0%
AAAAGGAAACATGTCAGAAC+AGG - chr2_2:55951802-55951821 Msa0259120:intron 35.0%
AAAGGAAACATGTCAGAACA+GGG - chr2_2:55951803-55951822 Msa0259120:intron 35.0%
AATGAATCAATGTTGGACAG+TGG - chr2_2:55951858-55951877 Msa0259120:intron 35.0%
!! ATTTTGTTTCAAAGGCGGTT+TGG + chr2_2:55951937-55951956 None:intergenic 35.0%
!! TCGGAATTTTGTTTCAAAGG+CGG + chr2_2:55951942-55951961 None:intergenic 35.0%
TGTTCTGCAAGATATGTCAT+CGG + chr2_2:55951961-55951980 None:intergenic 35.0%
ATCTTGCAGAACAACATTGA+CGG - chr2_2:55951968-55951987 Msa0259120:intron 35.0%
CAAAATTACTGGACATAACC+TGG + chr2_2:55952031-55952050 None:intergenic 35.0%
!! ATGTCCAGTAATTTTGAAGG+GGG - chr2_2:55952035-55952054 Msa0259120:intron 35.0%
!! AATTTTGAAGGGGGATTGTT+AGG - chr2_2:55952044-55952063 Msa0259120:intron 35.0%
!! TTAGGTTTTTCGAAGAATGG+AGG - chr2_2:55952062-55952081 Msa0259120:intron 35.0%
TTCGAAGAATGGAGGTAAAA+TGG - chr2_2:55952070-55952089 Msa0259120:intron 35.0%
TCGAAGAATGGAGGTAAAAT+GGG - chr2_2:55952071-55952090 Msa0259120:intron 35.0%
! CTGTAGAAACTAGTTCTCTA+AGG - chr2_2:55952096-55952115 Msa0259120:intron 35.0%
TAGATTTGCAAACTTCATCC+GGG + chr2_2:55952256-55952275 None:intergenic 35.0%
TGAATCATTTGGCGATCTTT+AGG + chr2_2:55952320-55952339 None:intergenic 35.0%
TGACACGATCTTGAATCATT+TGG + chr2_2:55952331-55952350 None:intergenic 35.0%
TTGCGAGAAATTGTTCCAAA+TGG - chr2_2:55952356-55952375 Msa0259120:intron 35.0%
!!! GACAAGTTTTTTGAGACATG+AGG + chr2_2:55952620-55952639 None:intergenic 35.0%
TGCACATACACACACAAATT+TGG - chr2_2:55952683-55952702 Msa0259120:intron 35.0%
!! ACAGAGACACAAATTTGTTG+AGG - chr2_2:55952715-55952734 Msa0259120:intron 35.0%
!!! GTTTTGAAAGACAACTTCGA+GGG - chr2_2:55952811-55952830 Msa0259120:intron 35.0%
! AATAGGACAGACCATTGATT+GGG + chr2_2:55952866-55952885 None:intergenic 35.0%
TAATAGGACAGACCATTGAT+TGG + chr2_2:55952867-55952886 None:intergenic 35.0%
! GCTGACTTAATAAGAGGATT+AGG - chr2_2:55953051-55953070 Msa0259120:intron 35.0%
! TAGTCAGTACATGGCTTTTA+TGG + chr2_2:55953152-55953171 None:intergenic 35.0%
! CTTCAAGATTAGTCAGTACA+TGG + chr2_2:55953161-55953180 None:intergenic 35.0%
TTATAGTGAAGACAACATCG+GGG + chr2_2:55953362-55953381 None:intergenic 35.0%
CTTATAGTGAAGACAACATC+GGG + chr2_2:55953363-55953382 None:intergenic 35.0%
! GTTTAATTTCCAGGCAAACA+GGG - chr2_2:55953434-55953453 Msa0259120:five_prime_UTR 35.0%
TTATAACTCTTTACCCCAGA+AGG - chr2_2:55953557-55953576 Msa0259120:five_prime_UTR 35.0%
TTCATACTATTACGCCTTCT+GGG + chr2_2:55953574-55953593 None:intergenic 35.0%
TTTCATACTATTACGCCTTC+TGG + chr2_2:55953575-55953594 None:intergenic 35.0%
! GAAGGCGTAATAGTATGAAA+TGG - chr2_2:55953575-55953594 Msa0259120:five_prime_UTR 35.0%
! GAAATGGATCACTTGTTACA+TGG - chr2_2:55953591-55953610 Msa0259120:five_prime_UTR 35.0%
TTGAAGGGAAATTAATGCGT+AGG - chr2_2:55953765-55953784 Msa0259120:five_prime_UTR 35.0%
!!! ATGACATGCATCGGATTTTT+TGG - chr2_2:55953924-55953943 Msa0259120:five_prime_UTR 35.0%
!!! TGACATGCATCGGATTTTTT+GGG - chr2_2:55953925-55953944 Msa0259120:five_prime_UTR 35.0%
TAAATCACAACACCAACTTC+TGG + chr2_2:55953970-55953989 None:intergenic 35.0%
! TTGAAGGGTATGGAAAGTAA+AGG - chr2_2:55954011-55954030 Msa0259120:five_prime_UTR 35.0%
!! GTAAATGTAAGCTCTAAGTG+TGG - chr2_2:55954131-55954150 Msa0259120:intron 35.0%
! CAGATGCAAATGGTAATGTG+TGG + chr2_2:55947397-55947416 None:intergenic 40.0%
TTGTGTAGCTCAGATGCAAA+TGG + chr2_2:55947407-55947426 None:intergenic 40.0%
GGGTCACACAAATGTTATCA+TGG + chr2_2:55947435-55947454 None:intergenic 40.0%
! GAGAAAGAGGAAGGGTTTTT+AGG + chr2_2:55947483-55947502 None:intergenic 40.0%
TGTGGTTAGAGAAAGAGGAA+GGG + chr2_2:55947491-55947510 None:intergenic 40.0%
TTGTGTGTGGTTAGAGAAAG+AGG + chr2_2:55947496-55947515 None:intergenic 40.0%
!! AAGTGTTGAGTACTTGAGAG+AGG + chr2_2:55947633-55947652 None:intergenic 40.0%
!! CTCTCTAGAATTTCTTCAGC+TGG - chr2_2:55947820-55947839 Msa0259120:three_prime_UTR 40.0%
TTGGATCCAAAAAGAAGTGG+AGG - chr2_2:55947866-55947885 Msa0259120:three_prime_UTR 40.0%
TGGATCCAAAAAGAAGTGGA+GGG - chr2_2:55947867-55947886 Msa0259120:three_prime_UTR 40.0%
TCCAAATCCTAACTACCACA+CGG + chr2_2:55947925-55947944 None:intergenic 40.0%
!! GAAGCTTTGAAGACTTTGTG+TGG - chr2_2:55948117-55948136 Msa0259120:intron 40.0%
! CTTTGAAGACTTTGTGTGGT+AGG - chr2_2:55948121-55948140 Msa0259120:intron 40.0%
!! AATGGTCTTATGCTGTGTTC+TGG - chr2_2:55948151-55948170 Msa0259120:intron 40.0%
!! TATGCTGTGTTCTGGAAGAT+TGG - chr2_2:55948159-55948178 Msa0259120:intron 40.0%
TCTGGCAAAACTGGTAAACT+TGG - chr2_2:55948399-55948418 Msa0259120:CDS 40.0%
CTGGCAAAACTGGTAAACTT+GGG - chr2_2:55948400-55948419 Msa0259120:CDS 40.0%
CAAAACTGGTAAACTTGGGT+GGG - chr2_2:55948404-55948423 Msa0259120:CDS 40.0%
! CATGCCGAAGTGTTATTGAT+TGG - chr2_2:55949018-55949037 Msa0259120:intron 40.0%
!! GCTAATCAGGGTTTGATTTG+TGG - chr2_2:55949324-55949343 Msa0259120:CDS 40.0%
GTGACACATCACAACAATAG+CGG + chr2_2:55949369-55949388 None:intergenic 40.0%
! AGGGTGTACTACTGTGATTT+TGG - chr2_2:55949501-55949520 Msa0259120:CDS 40.0%
!! TGAGTATGCTTTGACTTGAC+AGG - chr2_2:55949683-55949702 Msa0259120:CDS 40.0%
! GACTTGACAGGCTATTGATT+TGG - chr2_2:55949695-55949714 Msa0259120:CDS 40.0%
TGAGGAGAAGGACAAGAAAA+GGG + chr2_2:55949739-55949758 None:intergenic 40.0%
ATGAGGAGAAGGACAAGAAA+AGG + chr2_2:55949740-55949759 None:intergenic 40.0%
CTTCTCCTCATGACATTGTT+GGG - chr2_2:55949749-55949768 Msa0259120:CDS 40.0%
TCGAATTTGCCAAATCCGAA+CGG - chr2_2:55949775-55949794 Msa0259120:CDS 40.0%
TCCTCTTGAATTCCTAGATG+AGG + chr2_2:55949835-55949854 None:intergenic 40.0%
TCATCTAGGAATTCAAGAGG+AGG - chr2_2:55949834-55949853 Msa0259120:CDS 40.0%
GGAGGATAAAGTCTCTTCTT+TGG - chr2_2:55949852-55949871 Msa0259120:CDS 40.0%
TAGTCATTGTTGCAGGTGAA+GGG - chr2_2:55949899-55949918 Msa0259120:CDS 40.0%
ACTCAGTATAATTGGACGCT+CGG - chr2_2:55950011-55950030 Msa0259120:CDS 40.0%
CATTTACCAACAGTCATGAG+TGG - chr2_2:55950034-55950053 Msa0259120:CDS 40.0%
! TAAAAAGGCATATCCACCTG+AGG - chr2_2:55950077-55950096 Msa0259120:CDS 40.0%
AAATAGCTTCATACCTCAGG+TGG + chr2_2:55950093-55950112 None:intergenic 40.0%
! ATGCATGACCAATTTTCAGC+TGG - chr2_2:55950240-55950259 Msa0259120:CDS 40.0%
CCAATTTGAACAACTCCATG+AGG + chr2_2:55950381-55950400 None:intergenic 40.0%
CCTCATGGAGTTGTTCAAAT+TGG - chr2_2:55950378-55950397 Msa0259120:CDS 40.0%
!! CTGTAAAGGTAGTTCTGGTT+CGG - chr2_2:55950488-55950507 Msa0259120:intron 40.0%
!! TCGGTTTGGAAACACATAAC+TGG - chr2_2:55950507-55950526 Msa0259120:intron 40.0%
TGTGATTGGGTAATAACGCA+AGG + chr2_2:55950619-55950638 None:intergenic 40.0%
!! TCTTTGGATAGAAGGGCATT+GGG + chr2_2:55950819-55950838 None:intergenic 40.0%
CTTTCTAACGAACGACTTGA+TGG - chr2_2:55950852-55950871 Msa0259120:intron 40.0%
ACAGATGAATCAACAGACGA+AGG + chr2_2:55950897-55950916 None:intergenic 40.0%
! TTAGAGCCATTGACTACTGA+AGG + chr2_2:55950939-55950958 None:intergenic 40.0%
! GGATGGAGTGTTTGAACATT+AGG + chr2_2:55950991-55951010 None:intergenic 40.0%
CAAACACTCCATCCTTTAAG+CGG - chr2_2:55950997-55951016 Msa0259120:intron 40.0%
! AAGGAACTGAATGCTTTTGC+AGG + chr2_2:55951089-55951108 None:intergenic 40.0%
TAGGCTACAATCACTTTGAC+CGG + chr2_2:55951166-55951185 None:intergenic 40.0%
TATTCATTCCACCATGTACC+GGG + chr2_2:55951353-55951372 None:intergenic 40.0%
AATTTATCCGGAGCACAAGT+TGG - chr2_2:55951429-55951448 Msa0259120:CDS 40.0%
ATTTATCCGGAGCACAAGTT+GGG - chr2_2:55951430-55951449 Msa0259120:CDS 40.0%
CGCGATTGCTTTCAAAAAGA+TGG - chr2_2:55951597-55951616 Msa0259120:CDS 40.0%
CGCTGTCATCATAGATTGAA+TGG + chr2_2:55951625-55951644 None:intergenic 40.0%
GCACAAGCTTCTTCATGTTT+AGG + chr2_2:55951651-55951670 None:intergenic 40.0%
! CTGTTTGCTGATGAATCAGA+TGG - chr2_2:55951759-55951778 Msa0259120:CDS 40.0%
!!! TTGGACAGTGGCATTTTTTC+TGG - chr2_2:55951870-55951889 Msa0259120:intron 40.0%
!!! TGGACAGTGGCATTTTTTCT+GGG - chr2_2:55951871-55951890 Msa0259120:intron 40.0%
AACAGACCACCTATTAGATG+CGG - chr2_2:55951899-55951918 Msa0259120:intron 40.0%
TCTTGCAGAACAACATTGAC+GGG - chr2_2:55951969-55951988 Msa0259120:intron 40.0%
CAATCCCCCTTCAAAATTAC+TGG + chr2_2:55952042-55952061 None:intergenic 40.0%
!! GAAACTAGTTCTCTAAGGTC+TGG - chr2_2:55952101-55952120 Msa0259120:intron 40.0%
AATCGCAAAAGGCTTAAACC+AGG - chr2_2:55952275-55952294 Msa0259120:intron 40.0%
!!! GGTTTTGAAAGACAACTTCG+AGG - chr2_2:55952810-55952829 Msa0259120:intron 40.0%
GATGCTAATCGAGGTAATGA+TGG - chr2_2:55952915-55952934 Msa0259120:intron 40.0%
ATTAGGCTTGACCATCTTGA+AGG - chr2_2:55953068-55953087 Msa0259120:intron 40.0%
TTAGGCTTGACCATCTTGAA+GGG - chr2_2:55953069-55953088 Msa0259120:intron 40.0%
CTGACTAATCTTGAAGTTCG+TGG - chr2_2:55953165-55953184 Msa0259120:intron 40.0%
! GGTTTAATTTCCAGGCAAAC+AGG - chr2_2:55953433-55953452 Msa0259120:five_prime_UTR 40.0%
CAACATGGTATCAACTGCAT+TGG + chr2_2:55953535-55953554 None:intergenic 40.0%
TCATACTATTACGCCTTCTG+GGG + chr2_2:55953573-55953592 None:intergenic 40.0%
ATTGGACTTGATGTTGGTCA+TGG + chr2_2:55953664-55953683 None:intergenic 40.0%
TCTCAGATTGGACTTGATGT+TGG + chr2_2:55953670-55953689 None:intergenic 40.0%
! CAAGTCCAATCTGAGATTTC+AGG - chr2_2:55953674-55953693 Msa0259120:five_prime_UTR 40.0%
CTGATGTATTACTCGACTCT+CGG - chr2_2:55953901-55953920 Msa0259120:five_prime_UTR 40.0%
!!! GACATGCATCGGATTTTTTG+GGG - chr2_2:55953926-55953945 Msa0259120:five_prime_UTR 40.0%
CTTCTACTCATAGTTCACCT+TGG - chr2_2:55954076-55954095 Msa0259120:intron 40.0%
! AAGTGTGGTTTGTATGTCAG+TGG - chr2_2:55954146-55954165 Msa0259120:intron 40.0%
GTATGTCAGTGGAATCAAAG+AGG - chr2_2:55954157-55954176 Msa0259120:five_prime_UTR 40.0%
! ACTCAAGTGCTTCTGAAGAG+GGG + chr2_2:55947345-55947364 None:intergenic 45.0%
! CACTCAAGTGCTTCTGAAGA+GGG + chr2_2:55947346-55947365 None:intergenic 45.0%
! TCACTCAAGTGCTTCTGAAG+AGG + chr2_2:55947347-55947366 None:intergenic 45.0%
GTGTGGTTAGAGAAAGAGGA+AGG + chr2_2:55947492-55947511 None:intergenic 45.0%
GAGTTGTGTTGTGTTGTGTG+TGG + chr2_2:55947509-55947528 None:intergenic 45.0%
GGTTTCAGCTTCTGCTTCTT+GGG + chr2_2:55947577-55947596 None:intergenic 45.0%
TGGTTTCAGCTTCTGCTTCT+TGG + chr2_2:55947578-55947597 None:intergenic 45.0%
CTCTACAAGCATGAATCTCG+TGG - chr2_2:55947740-55947759 Msa0259120:three_prime_UTR 45.0%
! CTCAACCCTCCACTTCTTTT+TGG + chr2_2:55947875-55947894 None:intergenic 45.0%
AGAACACAACAAGCAGGAAG+AGG - chr2_2:55947893-55947912 Msa0259120:three_prime_UTR 45.0%
GAACACAACAAGCAGGAAGA+GGG - chr2_2:55947894-55947913 Msa0259120:three_prime_UTR 45.0%
GCAAAACTGGTAAACTTGGG+TGG - chr2_2:55948403-55948422 Msa0259120:CDS 45.0%
TTACCAGATGCACTACCAAC+TGG - chr2_2:55949189-55949208 Msa0259120:CDS 45.0%
!! AATCCAGTTGGTAGTGCATC+TGG + chr2_2:55949195-55949214 None:intergenic 45.0%
ATTCCAAACACGCACTGAGA+CGG + chr2_2:55949460-55949479 None:intergenic 45.0%
! TCAGTGCGTGTTTGGAATGA+CGG - chr2_2:55949462-55949481 Msa0259120:CDS 45.0%
! GTTTGGAATGACGGTGAGTT+TGG - chr2_2:55949471-55949490 Msa0259120:CDS 45.0%
ACGGTGAGTTTGGTAGAATC+AGG - chr2_2:55949481-55949500 Msa0259120:CDS 45.0%
CGGTGAGTTTGGTAGAATCA+GGG - chr2_2:55949482-55949501 Msa0259120:CDS 45.0%
CCAACAATGTCATGAGGAGA+AGG + chr2_2:55949751-55949770 None:intergenic 45.0%
CCTTCTCCTCATGACATTGT+TGG - chr2_2:55949748-55949767 Msa0259120:CDS 45.0%
GACATCCCAACAATGTCATG+AGG + chr2_2:55949757-55949776 None:intergenic 45.0%
CGAATTTGCCAAATCCGAAC+GGG - chr2_2:55949776-55949795 Msa0259120:CDS 45.0%
GAATTTGCCAAATCCGAACG+GGG - chr2_2:55949777-55949796 Msa0259120:CDS 45.0%
GACTTTCAATCGCCTCATCT+AGG - chr2_2:55949820-55949839 Msa0259120:CDS 45.0%
GCCTCATCTAGGAATTCAAG+AGG - chr2_2:55949831-55949850 Msa0259120:CDS 45.0%
CTAGTCATTGTTGCAGGTGA+AGG - chr2_2:55949898-55949917 Msa0259120:CDS 45.0%
GAGAATCCACTCATGACTGT+TGG + chr2_2:55950043-55950062 None:intergenic 45.0%
CCTGCATTCCAGCTGAAAAT+TGG + chr2_2:55950251-55950270 None:intergenic 45.0%
! CCAATTTTCAGCTGGAATGC+AGG - chr2_2:55950248-55950267 Msa0259120:CDS 45.0%
GTTATTCCTGTGCTTCCTCA+TGG - chr2_2:55950363-55950382 Msa0259120:CDS 45.0%
!! AAGGTAGTTCTGGTTCGGTT+TGG - chr2_2:55950493-55950512 Msa0259120:intron 45.0%
! CATAACTGGTCTGTTCGGTT+TGG - chr2_2:55950521-55950540 Msa0259120:intron 45.0%
CGCAAGGATATCACTGATCT+AGG + chr2_2:55950603-55950622 None:intergenic 45.0%
! GTCTTTGGATAGAAGGGCAT+TGG + chr2_2:55950820-55950839 None:intergenic 45.0%
! CTTGATGGACCTTCTACTTC+CGG - chr2_2:55950867-55950886 Msa0259120:intron 45.0%
TCCACTCCTTCAGTAGTCAA+TGG - chr2_2:55950930-55950949 Msa0259120:intron 45.0%
CGCAGCATGAGATGAATAAC+TGG + chr2_2:55950965-55950984 None:intergenic 45.0%
!! TTTTCAGGGTAGAGTTGTGG+AGG - chr2_2:55951032-55951051 Msa0259120:intron 45.0%
CTTTGACCGGATTGACCAAA+CGG + chr2_2:55951153-55951172 None:intergenic 45.0%
TTCATTCCCAACTTGTGCTC+CGG + chr2_2:55951439-55951458 None:intergenic 45.0%
TGCTCCTCGGGATTAAAAGA+GGG + chr2_2:55951543-55951562 None:intergenic 45.0%
ATGCTCCTCGGGATTAAAAG+AGG + chr2_2:55951544-55951563 None:intergenic 45.0%
ACTATTCAGCACATGCTCCT+CGG + chr2_2:55951556-55951575 None:intergenic 45.0%
CTGAATAGTGGTCATATCCC+AGG - chr2_2:55951567-55951586 Msa0259120:intron 45.0%
! ACAAACTTCTGAAAGGCCAC+TGG - chr2_2:55951730-55951749 Msa0259120:CDS 45.0%
CAGCAAACAGTTCATTCCAG+TGG + chr2_2:55951749-55951768 None:intergenic 45.0%
TTGAGACCACCGCATCTAAT+AGG + chr2_2:55951911-55951930 None:intergenic 45.0%
ATTAGATGCGGTGGTCTCAA+CGG - chr2_2:55951911-55951930 Msa0259120:intron 45.0%
CTTGCAGAACAACATTGACG+GGG - chr2_2:55951970-55951989 Msa0259120:intron 45.0%
! TCTAAGGTCTGGTTGTAGCA+AGG - chr2_2:55952112-55952131 Msa0259120:intron 45.0%
TCTGGTTGTAGCAAGGATGA+TGG - chr2_2:55952119-55952138 Msa0259120:intron 45.0%
CTCTCAACTTAGTTCGTGGT+TGG - chr2_2:55952175-55952194 Msa0259120:intron 45.0%
CTTAGTTCGTGGTTGGAGAA+TGG - chr2_2:55952182-55952201 Msa0259120:intron 45.0%
AACTGGATACTCTAAACGCC+CGG - chr2_2:55952235-55952254 Msa0259120:intron 45.0%
TTAAACCAGGAGAGAATCCC+AGG - chr2_2:55952288-55952307 Msa0259120:intron 45.0%
ATTTGGCGATCTTTAGGTCG+AGG + chr2_2:55952314-55952333 None:intergenic 45.0%
GCCGACAAGCTGAAACAAAA+CGG - chr2_2:55952561-55952580 Msa0259120:intron 45.0%
!!! CCCGTTTTGTTTCAGCTTGT+CGG + chr2_2:55952565-55952584 None:intergenic 45.0%
CCGACAAGCTGAAACAAAAC+GGG - chr2_2:55952562-55952581 Msa0259120:intron 45.0%
CGACAAGCTGAAACAAAACG+GGG - chr2_2:55952563-55952582 Msa0259120:intron 45.0%
GAAACAAAACGGGGAGTCTA+AGG - chr2_2:55952572-55952591 Msa0259120:intron 45.0%
! AAAACGGGGAGTCTAAGGTA+TGG - chr2_2:55952577-55952596 Msa0259120:intron 45.0%
TATTAGTAAGGAAGGTGGGC+TGG - chr2_2:55952789-55952808 Msa0259120:intron 45.0%
TTGAAAGACAACTTCGAGGG+AGG - chr2_2:55952814-55952833 Msa0259120:intron 45.0%
TGAAAGACAACTTCGAGGGA+GGG - chr2_2:55952815-55952834 Msa0259120:intron 45.0%
TGAGGTTGGATCCCAATCAA+TGG - chr2_2:55952852-55952871 Msa0259120:intron 45.0%
ATTCTTACAGATGCTCTGCG+AGG - chr2_2:55953005-55953024 Msa0259120:intron 45.0%
TAGGCTTGACCATCTTGAAG+GGG - chr2_2:55953070-55953089 Msa0259120:intron 45.0%
TTCCATTACCCCCTTCAAGA+TGG + chr2_2:55953082-55953101 None:intergenic 45.0%
TATGTCACTCGTTCGTCTTC+TGG - chr2_2:55953479-55953498 Msa0259120:five_prime_UTR 45.0%
!! TCTTCTGGAGCAAACGATGA+AGG - chr2_2:55953494-55953513 Msa0259120:five_prime_UTR 45.0%
!! CTTCTGGAGCAAACGATGAA+GGG - chr2_2:55953495-55953514 Msa0259120:five_prime_UTR 45.0%
! GTCCAATCTGAGATTTCAGG+CGG - chr2_2:55953677-55953696 Msa0259120:five_prime_UTR 45.0%
!!! CATCGGATTTTTTGGGGAGA+TGG - chr2_2:55953932-55953951 Msa0259120:five_prime_UTR 45.0%
! TGGCGTAGTTTTCCAGAAGT+TGG - chr2_2:55953955-55953974 Msa0259120:five_prime_UTR 45.0%
TTCTTTCTGACTCCCGACAC+TGG - chr2_2:55947312-55947331 Msa0259120:three_prime_UTR 50.0%
AGGGGTTATGAACCAGTGTC+GGG + chr2_2:55947327-55947346 None:intergenic 50.0%
GAGGGGTTATGAACCAGTGT+CGG + chr2_2:55947328-55947347 None:intergenic 50.0%
!! AGGGTTTTTAGGAGAGACCG+AGG + chr2_2:55947472-55947491 None:intergenic 50.0%
TTCTTGGGTGAGTGTGGAAG+TGG + chr2_2:55947562-55947581 None:intergenic 50.0%
TTCTGCTTCTTGGGTGAGTG+TGG + chr2_2:55947568-55947587 None:intergenic 50.0%
TTCAGCTGGAAATGGCATGC+TGG - chr2_2:55947834-55947853 Msa0259120:three_prime_UTR 50.0%
GGCATGCTGGAAACTGAACT+TGG - chr2_2:55947847-55947866 Msa0259120:three_prime_UTR 50.0%
GGGTTGAGAACACAACAAGC+AGG - chr2_2:55947887-55947906 Msa0259120:three_prime_UTR 50.0%
GCCGTGTGGTAGTTAGGATT+TGG - chr2_2:55947921-55947940 Msa0259120:exon 50.0%
AGCGGTGAGAATGACAGAGA+AGG + chr2_2:55949351-55949370 None:intergenic 50.0%
TTACCGTCTCAGTGCGTGTT+TGG - chr2_2:55949454-55949473 Msa0259120:CDS 50.0%
CATTGTTGCAGGTGAAGGGT+AGG - chr2_2:55949903-55949922 Msa0259120:CDS 50.0%
! ACAACTCCATGAGGAAGCAC+AGG + chr2_2:55950372-55950391 None:intergenic 50.0%
AAGAGCCTGATCTTGCAGCT+CGG - chr2_2:55950786-55950805 Msa0259120:intron 50.0%
! ATCAACAGACGAAGGCACAC+CGG + chr2_2:55950889-55950908 None:intergenic 50.0%
! GCCATTGACTACTGAAGGAG+TGG + chr2_2:55950934-55950953 None:intergenic 50.0%
ACAGACAGAAGCCTCAGCTT+CGG - chr2_2:55951285-55951304 Msa0259120:intron 50.0%
TCAGATTATGGCCGAAGCTG+AGG + chr2_2:55951299-55951318 None:intergenic 50.0%
CTTAGAGGAATCCCGGTACA+TGG - chr2_2:55951339-55951358 Msa0259120:intron 50.0%
! CATCCCCTCTTTTAATCCCG+AGG - chr2_2:55951536-55951555 Msa0259120:intron 50.0%
GCTCCTCGGGATTAAAAGAG+GGG + chr2_2:55951542-55951561 None:intergenic 50.0%
CTATTCAGCACATGCTCCTC+GGG + chr2_2:55951555-55951574 None:intergenic 50.0%
! GAGGAGCATGTGCTGAATAG+TGG - chr2_2:55951555-55951574 Msa0259120:intron 50.0%
AGCAATCGCGGACAAAACCT+GGG + chr2_2:55951587-55951606 None:intergenic 50.0%
AAGCAATCGCGGACAAAACC+TGG + chr2_2:55951588-55951607 None:intergenic 50.0%
TGTGCTCAACAACCTCCATC+AGG - chr2_2:55951666-55951685 Msa0259120:CDS 50.0%
AACAGGTCATCACCACCTGA+TGG + chr2_2:55951684-55951703 None:intergenic 50.0%
GGAAACATGTCAGAACAGGG+AGG - chr2_2:55951806-55951825 Msa0259120:intron 50.0%
ATGTCAGAACAGGGAGGCTA+CGG - chr2_2:55951812-55951831 Msa0259120:intron 50.0%
AGACCACCTATTAGATGCGG+TGG - chr2_2:55951902-55951921 Msa0259120:intron 50.0%
AGACCACCGCATCTAATAGG+TGG + chr2_2:55951908-55951927 None:intergenic 50.0%
ACAGACACGAGAGGGAATAG+AGG + chr2_2:55952006-55952025 None:intergenic 50.0%
ACCTGGTTACAGACACGAGA+GGG + chr2_2:55952014-55952033 None:intergenic 50.0%
AACCTGGTTACAGACACGAG+AGG + chr2_2:55952015-55952034 None:intergenic 50.0%
! GGTTGTAGCAAGGATGATGG+TGG - chr2_2:55952122-55952141 Msa0259120:intron 50.0%
GTGGCTCTCAACTTAGTTCG+TGG - chr2_2:55952171-55952190 Msa0259120:intron 50.0%
GTGTAGCATAGATGCACTGC+TGG - chr2_2:55952491-55952510 Msa0259120:intron 50.0%
GCATAGATGCACTGCTGGAA+CGG - chr2_2:55952496-55952515 Msa0259120:intron 50.0%
CGGCATGCTTTGTCACACTT+TGG + chr2_2:55952545-55952564 None:intergenic 50.0%
GAAAGACAACTTCGAGGGAG+GGG - chr2_2:55952816-55952835 Msa0259120:intron 50.0%
GCTACATGGGCATATGAGGT+TGG - chr2_2:55952838-55952857 Msa0259120:intron 50.0%
TCCTCGTCAGATGCTAATCG+AGG - chr2_2:55952906-55952925 Msa0259120:intron 50.0%
ACCTCGATTAGCATCTGACG+AGG + chr2_2:55952910-55952929 None:intergenic 50.0%
TACAGATGCTCTGCGAGGAA+CGG - chr2_2:55953010-55953029 Msa0259120:intron 50.0%
AGGCTTGACCATCTTGAAGG+GGG - chr2_2:55953071-55953090 Msa0259120:intron 50.0%
GACCATCTTGAAGGGGGTAA+TGG - chr2_2:55953077-55953096 Msa0259120:intron 50.0%
CTGGGCACGTTTCATTGTTG+AGG - chr2_2:55953119-55953138 Msa0259120:intron 50.0%
GACCGCCTGAAATCTCAGAT+TGG + chr2_2:55953682-55953701 None:intergenic 50.0%
GACTCTCGGATGACATGCAT+CGG - chr2_2:55953915-55953934 Msa0259120:five_prime_UTR 50.0%
!!! CGGATTTTTTGGGGAGATGG+TGG - chr2_2:55953935-55953954 Msa0259120:five_prime_UTR 50.0%
GGTCATGCCGTGTGGTAGTT+AGG - chr2_2:55947915-55947934 Msa0259120:exon 55.0%
TTGCCAAATCCGAACGGGGA+CGG - chr2_2:55949781-55949800 Msa0259120:CDS 55.0%
AGAGCCTGATCTTGCAGCTC+GGG - chr2_2:55950787-55950806 Msa0259120:intron 55.0%
TACACCCGAGCTGCAAGATC+AGG + chr2_2:55950794-55950813 None:intergenic 55.0%
! GAAGGCACACCGGAAGTAGA+AGG + chr2_2:55950879-55950898 None:intergenic 55.0%
TTGACCAAACGGCGCAGAAC+CGG + chr2_2:55951142-55951161 None:intergenic 55.0%
TCTGCGCCGTTTGGTCAATC+CGG - chr2_2:55951144-55951163 Msa0259120:intron 55.0%
AGAGGAATCCCGGTACATGG+TGG - chr2_2:55951342-55951361 Msa0259120:intron 55.0%
GCTCAACAACCTCCATCAGG+TGG - chr2_2:55951669-55951688 Msa0259120:CDS 55.0%
AGGTCATCACCACCTGATGG+AGG + chr2_2:55951681-55951700 None:intergenic 55.0%
GACACGAGAGGGAATAGAGG+TGG + chr2_2:55952003-55952022 None:intergenic 55.0%
TCCCTCTCGTGTCTGTAACC+AGG - chr2_2:55952010-55952029 Msa0259120:intron 55.0%
CGATCTTTAGGTCGAGGCCT+GGG + chr2_2:55952308-55952327 None:intergenic 55.0%
AGGGGCTACATGGGCATATG+AGG - chr2_2:55952834-55952853 Msa0259120:intron 55.0%
ACAGATGCTCTGCGAGGAAC+GGG - chr2_2:55953011-55953030 Msa0259120:intron 55.0%
CGAGGAACGGGGTTTCTTTC+TGG - chr2_2:55953023-55953042 Msa0259120:intron 55.0%
AAACAGGGACGTGACGAGGA+TGG - chr2_2:55953449-55953468 Msa0259120:five_prime_UTR 55.0%
AGGAAGAGGGTCATGCCGTG+TGG - chr2_2:55947907-55947926 Msa0259120:three_prime_UTR 60.0%
TGCCAAATCCGAACGGGGAC+GGG - chr2_2:55949782-55949801 Msa0259120:CDS 60.0%
AACCAACTCCCGTCCCCGTT+CGG + chr2_2:55949793-55949812 None:intergenic 60.0%
!! TTTGCCGGTTCTGCGCCGTT+TGG - chr2_2:55951135-55951154 Msa0259120:CDS 60.0%
GCGATCTTTAGGTCGAGGCC+TGG + chr2_2:55952309-55952328 None:intergenic 60.0%
ACTTCGAGGGAGGGGCTACA+TGG - chr2_2:55952824-55952843 Msa0259120:intron 60.0%
CTTCGAGGGAGGGGCTACAT+GGG - chr2_2:55952825-55952844 Msa0259120:intron 60.0%
CAGATGCTCTGCGAGGAACG+GGG - chr2_2:55953012-55953031 Msa0259120:intron 60.0%
TCGTCACGTCCCTGTTTGCC+TGG + chr2_2:55953446-55953465 None:intergenic 60.0%
AGGCAAACAGGGACGTGACG+AGG - chr2_2:55953445-55953464 Msa0259120:five_prime_UTR 60.0%
CTCCCGTCCCCGTTCGGATT+TGG + chr2_2:55949787-55949806 None:intergenic 65.0%
ATCCGAACGGGGACGGGAGT+TGG - chr2_2:55949788-55949807 Msa0259120:CDS 65.0%
CGAGGCCTGGGATTCTCTCC+TGG + chr2_2:55952296-55952315 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 55947256 55954257 55947256 ID=Msa0259120;Name=Msa0259120
chr2_2 mRNA 55947256 55954257 55947256 ID=Msa0259120-mRNA-1;Parent=Msa0259120;Name=Msa0259120-mRNA-1;_AED=0.09;_eAED=0.09;_QI=739|0.81|0.75|1|0.90|0.83|12|673|847
chr2_2 exon 55947256 55948066 55947256 ID=Msa0259120-mRNA-1:exon:16897;Parent=Msa0259120-mRNA-1
chr2_2 exon 55948373 55948498 55948373 ID=Msa0259120-mRNA-1:exon:16896;Parent=Msa0259120-mRNA-1
chr2_2 exon 55948586 55948726 55948586 ID=Msa0259120-mRNA-1:exon:16895;Parent=Msa0259120-mRNA-1
chr2_2 exon 55948920 55949021 55948920 ID=Msa0259120-mRNA-1:exon:16894;Parent=Msa0259120-mRNA-1
chr2_2 exon 55949128 55950474 55949128 ID=Msa0259120-mRNA-1:exon:16893;Parent=Msa0259120-mRNA-1
chr2_2 exon 55950572 55950777 55950572 ID=Msa0259120-mRNA-1:exon:16892;Parent=Msa0259120-mRNA-1
chr2_2 exon 55951114 55951159 55951114 ID=Msa0259120-mRNA-1:exon:16891;Parent=Msa0259120-mRNA-1
chr2_2 exon 55951244 55951285 55951244 ID=Msa0259120-mRNA-1:exon:16890;Parent=Msa0259120-mRNA-1
chr2_2 exon 55951415 55951496 55951415 ID=Msa0259120-mRNA-1:exon:16889;Parent=Msa0259120-mRNA-1
chr2_2 exon 55951593 55951808 55951593 ID=Msa0259120-mRNA-1:exon:16888;Parent=Msa0259120-mRNA-1
chr2_2 exon 55953317 55954050 55953317 ID=Msa0259120-mRNA-1:exon:16887;Parent=Msa0259120-mRNA-1
chr2_2 exon 55954155 55954257 55954155 ID=Msa0259120-mRNA-1:exon:16886;Parent=Msa0259120-mRNA-1
chr2_2 five_prime_UTR 55954155 55954257 55954155 ID=Msa0259120-mRNA-1:five_prime_utr;Parent=Msa0259120-mRNA-1
chr2_2 five_prime_UTR 55953415 55954050 55953415 ID=Msa0259120-mRNA-1:five_prime_utr;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55953317 55953414 55953317 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55951593 55951808 55951593 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55951415 55951496 55951415 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55951244 55951285 55951244 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55951114 55951159 55951114 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55950572 55950777 55950572 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55949128 55950474 55949128 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55948920 55949021 55948920 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55948586 55948726 55948586 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55948373 55948498 55948373 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 CDS 55947929 55948066 55947929 ID=Msa0259120-mRNA-1:cds;Parent=Msa0259120-mRNA-1
chr2_2 three_prime_UTR 55947256 55947928 55947256 ID=Msa0259120-mRNA-1:three_prime_utr;Parent=Msa0259120-mRNA-1
Gene Sequence

>Msa0259120

ATGGGTTTTCTGTTGAAAGAAGCTTTGAAGACTTTGTGTGGTAGGAATAATCAATGGTCTTATGCTGTGTTCTGGAAGATTGGTTGCAACAATTCTAAGCTATTGATTTGGGAAGAATGCTATTATGAACCCTTTTCTTGTCCTTCTCCTCATGACATTGTTGGGATGTCGAATTTGCCAAATCCGAACGGGGACGGGAGTTGGTTTTCATCTGACTTTCAATCGCCTCATCTAGGAATTCAAGAGGAGGATAAAGTCTCTTCTTTGGTTAACAAAATGACAGTAAATAATCTAGTCATTGTTGCAGGTGAAGGTATAATTGGACGCTCGGCATTTACCAACAGTCATGAGTGGATTCTCTTGAACGATTTCGCTAAAAAGGCATATCCACCTGAGGTATATGCTGAAATGCATGACCAATTTTCAGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCTCATGGAGTTGTTCAAATTGCAATTTTAATGATACAGATAATGGAGAATATGGGATTTGTGCATGAAGTAAAGAGCCTGATCTTGCAGCTCGGGTGTATTCCCAATGCCCTTCTATCCAAAGACTATTCTGCCAAACTTTCTAACGAACGACTTGATGGACCTTCTACTTCCGGTGTGCCTTCGTCTGTTGATTCATCTGTCATTACTTCGAATTCCACTCCTTCAGGTAGAGTTGTGGAGGCTAGAGTAATACCCTCAAATTTTGATTCAAACCTGCAAAAGCATTCAGTTCCTTATAATGCAAGATCTGAATTCAACAACTTTGCCGGTTCTGCGCCGTTTGGTCAATCCGGTCAAAGTGATTGTAGCCTAAAATATATGGAGCAGCAAAATTTATCTGTAGCTGGGAGTCAAGATCATGTTAACCCTTGTGTTAATGTTTCAAGTTCCTTAAACATTTCTCAACTGAAAACAGACAGAAGCCTCAGCTTCGGCCATAATCTGAGTTCTAGCAGTACTTCATTACTTAGAGGAATCCCGGTACATGGTGGAATGAATAATCTTCTGAGGGCAAATCTGATTACTAGCTCAAAATCACCGAAAGTATCTGCAGCTAATTTATCCGGAGCACAAGTTGGGAATGAACTTCAAAATAAAGATTTAACCTTTAAGTTTGCTTCAACAGATCAAAAGATAAACTATGACATGCTTCAGGCTCATAGCATCCCCTCTTTTAATCCCGAGGAGCATGTGCTGAATAGTGGTCATATCCCAGGTTTTGTCCGCGATTGCTTTCAAAAAGATGGTACCATTCAATCTATGATGACAGCGAATCCTAAACATGAAGAAGCTTGTGCTCAACAACCTCCATCAGGTGGTGATGACCTGTTTGATATTTTAGGTGTGGATTTTAAAAACAAACTTCTGAAAGGCCACTGGAATGAACTGTTTGCTGATGAATCAGATGGCAATGCAGAAAATAAGGTTAAAAAGGAAACATGTCAGAACAGGGAGGCTACGGCTTCTGATTGTTATTACTCAGTTAATGAATCAATGTTGGACAGTGGCATTTTTTCTGGGATGTCAACAGACCACCTATTAGATGCGGTGGTCTCAACGGCCAAACCGCCTTTGAAACAAAATTCCGATGACATATCTTGCAGAACAACATTGACGGGGAATAGTACCACCTCTATTCCCTCTCGTGTCTGTAACCAGGTTATGTCCAGTAATTTTGAAGGGGGATTGTTAGGTTTTTCGAAGAATGGAGGTAAAATGGGTGCTGTAGAAACTAGTTCTCTAAGGTCTGGTTGTAGCAAGGATGATGGTGGAAAATGCTATCAAACTACAACTGTATGTGGCTCTCAACTTAGTTCGTGGTTGGAGAATGGTAGCAATATGAAGCATGAAAATAGTGTTTCAACTGGATACTCTAAACGCCCGGATGAAGTTTGCAAATCTAATCGCAAAAGGCTTAAACCAGGAGAGAATCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTCAAAGAGTTGCGAGAAATTGTTCCAAATGGAGCAAAATGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGCTTTTCTTCCAAAGTGTGACAAAGCATGCCGACAAGCTGAAACAAAACGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGGCTGGTTTTGAAAGACAACTTCGAGGGAGGGGCTACATGGGCATATGAGGTTGGATCCCAATCAATGGTCTGTCCTATTATAGTTGAAGATTTGAATACTCCTCGTCAGATGCTAATCGAGATGCTCTGCGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATAAGAGGATTAGGCTTGACCATCTTGAAGGGGGTAATGGAATCTCACAATGACAAAATCTGGGCACGTTTCATTGTTGAGGCAAACAGGGACGTGACGAGGATGGAAATATTTATGTCACTCGTTCGTCTTCTGGAGCAAACGATGAAGGGTAATGCATCATCATCCAATGCAGTTGATACCATGTTGCGTTATAACTCTTTACCCCAGAAGGCGTAA
Protein sequence

>Msa0259120

MGFLLKEALKTLCGRNNQWSYAVFWKIGCNNSKLLIWEECYYEPFSCPSPHDIVGMSNLPNPNGDGSWFSSDFQSPHLGIQEEDKVSSLVNKMTVNNLVIVAGEGIIGRSAFTNSHEWILLNDFAKKAYPPEVYAEMHDQFSAGMQTVAVIPVLPHGVVQIAILMIQIMENMGFVHEVKSLILQLGCIPNALLSKDYSAKLSNERLDGPSTSGVPSSVDSSVITSNSTPSGRVVEARVIPSNFDSNLQKHSVPYNARSEFNNFAGSAPFGQSGQSDCSLKYMEQQNLSVAGSQDHVNPCVNVSSSLNISQLKTDRSLSFGHNLSSSSTSLLRGIPVHGGMNNLLRANLITSSKSPKVSAANLSGAQVGNELQNKDLTFKFASTDQKINYDMLQAHSIPSFNPEEHVLNSGHIPGFVRDCFQKDGTIQSMMTANPKHEEACAQQPPSGGDDLFDILGVDFKNKLLKGHWNELFADESDGNAENKVKKETCQNREATASDCYYSVNESMLDSGIFSGMSTDHLLDAVVSTAKPPLKQNSDDISCRTTLTGNSTTSIPSRVCNQVMSSNFEGGLLGFSKNGGKMGAVETSSLRSGCSKDDGGKCYQTTTVCGSQLSSWLENGSNMKHENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFFQSVTKHADKLKQNGESKIISKEGGLVLKDNFEGGATWAYEVGSQSMVCPIIVEDLNTPRQMLIEMLCEERGFFLEIADLIRGLGLTILKGVMESHNDKIWARFIVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAVDTMLRYNSLPQKA*