AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0350690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0350690 MtrunA17_Chr3g0085321 93.122 189 8 1 279 462 1 189 3.55e-123 356
Msa0350690 MtrunA17_Chr3g0085321 70.238 168 38 1 1 156 1 168 3.97e-76 236
Msa0350690 MtrunA17_Chr3g0085321 57.252 131 43 1 153 270 55 185 6.71e-44 152
Msa0350690 MtrunA17_Chr3g0085301 79.381 194 35 1 274 462 1 194 5.47e-109 320
Msa0350690 MtrunA17_Chr3g0085301 89.412 170 6 1 1 158 6 175 3.71e-104 308
Msa0350690 MtrunA17_Chr3g0085301 58.779 131 41 1 153 270 60 190 7.01e-44 152
Msa0350690 MtrunA17_Chr3g0090231 71.958 189 42 3 279 461 1 184 1.09e-92 278
Msa0350690 MtrunA17_Chr3g0090231 64.458 166 42 2 3 156 4 164 9.92e-69 217
Msa0350690 MtrunA17_Chr3g0090231 54.198 131 47 1 153 270 51 181 3.72e-42 147
Msa0350690 MtrunA17_Chr4g0040551 71.429 189 43 3 279 461 1 184 4.81e-92 277
Msa0350690 MtrunA17_Chr4g0040551 64.458 166 42 2 3 156 4 164 1.28e-67 214
Msa0350690 MtrunA17_Chr4g0040551 54.198 131 47 1 153 270 51 181 8.69e-43 149
Msa0350690 MtrunA17_Chr3g0085311 64.021 189 63 1 279 462 1 189 3.09e-83 254
Msa0350690 MtrunA17_Chr3g0085311 86.260 131 5 1 153 270 55 185 4.27e-72 226
Msa0350690 MtrunA17_Chr3g0085311 57.738 168 59 1 1 156 1 168 1.60e-59 193
Msa0350690 MtrunA17_Chr3g0085291 61.905 189 65 2 279 462 1 187 2.50e-79 244
Msa0350690 MtrunA17_Chr3g0085291 79.389 131 12 2 153 270 55 183 3.08e-64 205
Msa0350690 MtrunA17_Chr3g0085291 57.738 168 57 3 1 156 1 166 8.73e-58 189
Msa0350690 MtrunA17_Chr7g0259101 39.528 339 172 9 153 461 57 392 7.94e-59 198
Msa0350690 MtrunA17_Chr7g0259101 41.176 187 104 3 278 461 10 193 2.38e-34 132
Msa0350690 MtrunA17_Chr7g0259101 37.107 159 83 3 12 155 215 371 3.38e-23 101
Msa0350690 MtrunA17_Chr7g0259101 42.188 128 59 2 43 155 45 172 3.55e-23 100
Msa0350690 MtrunA17_Chr1g0177051 49.171 181 86 4 285 461 7 185 5.87e-47 160
Msa0350690 MtrunA17_Chr1g0177051 47.500 160 66 5 13 156 8 165 5.19e-33 123
Msa0350690 MtrunA17_Chr1g0177051 49.254 134 51 3 153 270 50 182 4.02e-32 121
Msa0350690 MtrunA17_Chr1g0175911 45.556 180 92 4 284 461 16 191 2.18e-43 151
Msa0350690 MtrunA17_Chr1g0175911 40.876 137 67 2 43 165 46 182 2.50e-28 110
Msa0350690 MtrunA17_Chr1g0175911 45.455 132 55 5 153 269 58 187 1.91e-23 97.4
Msa0350690 MtrunA17_Chr4g0005081 48.000 150 76 1 314 461 47 196 6.24e-40 142
Msa0350690 MtrunA17_Chr4g0005081 39.752 161 76 3 16 156 17 176 9.83e-30 115
Msa0350690 MtrunA17_Chr4g0005081 47.143 140 58 4 145 269 54 192 9.54e-27 106
Msa0350690 MtrunA17_Chr4g0005031 46.667 150 78 1 314 461 71 220 5.67e-39 140
Msa0350690 MtrunA17_Chr4g0005031 40.244 164 73 5 14 156 41 200 1.29e-27 109
Msa0350690 MtrunA17_Chr4g0005031 40.714 140 67 3 145 269 78 216 4.70e-22 94.4
Msa0350690 MtrunA17_Chr4g0005071 45.333 150 80 1 314 461 46 195 1.80e-37 135
Msa0350690 MtrunA17_Chr4g0005071 38.854 157 75 3 20 156 20 175 6.23e-27 107
Msa0350690 MtrunA17_Chr4g0005071 46.970 132 55 3 153 269 60 191 2.14e-26 105
Msa0350690 MtrunA17_Chr4g0005041 43.333 150 83 1 314 461 48 197 1.25e-36 133
Msa0350690 MtrunA17_Chr4g0005041 36.250 160 83 3 16 156 18 177 5.82e-26 104
Msa0350690 MtrunA17_Chr4g0005041 43.939 132 59 2 153 269 62 193 4.24e-25 102
Msa0350690 MtrunA17_Chr7g0259091 39.474 190 109 3 275 461 7 193 4.15e-36 132
Msa0350690 MtrunA17_Chr7g0259091 35.503 169 92 3 2 155 6 172 9.14e-25 101
Msa0350690 MtrunA17_Chr7g0259091 42.857 133 60 4 153 269 57 189 1.04e-19 87.0
Msa0350690 MtrunA17_Chr4g0005111 41.667 156 90 1 307 461 34 189 6.25e-36 131
Msa0350690 MtrunA17_Chr4g0005111 38.211 123 63 2 43 152 43 165 1.59e-22 94.7
Msa0350690 MtrunA17_Chr4g0005111 35.115 131 71 2 153 269 55 185 3.94e-19 85.1
Msa0350690 MtrunA17_Chr7g0243501 43.046 151 85 1 312 461 41 191 9.82e-36 130
Msa0350690 MtrunA17_Chr7g0243501 35.673 171 87 5 1 152 1 167 2.05e-25 102
Msa0350690 MtrunA17_Chr7g0243501 43.363 113 51 1 170 269 75 187 1.54e-23 97.8
Msa0350690 MtrunA17_Chr7g0259071 43.590 156 75 3 314 461 40 190 1.08e-35 130
Msa0350690 MtrunA17_Chr7g0259071 41.538 130 57 4 43 155 42 169 5.27e-23 96.3
Msa0350690 MtrunA17_Chr7g0259071 47.273 110 42 4 175 269 78 186 7.06e-19 84.3
Msa0350690 MtrunA17_Chr4g0005011 43.836 146 78 2 316 459 51 194 9.93e-35 128
Msa0350690 MtrunA17_Chr4g0005011 42.742 124 57 2 43 152 51 174 1.40e-25 103
Msa0350690 MtrunA17_Chr4g0005011 39.394 132 63 3 153 269 63 192 4.20e-19 85.5
Msa0350690 MtrunA17_Chr7g0259121 45.223 157 75 4 314 461 38 192 1.66e-33 125
Msa0350690 MtrunA17_Chr7g0259121 42.105 133 58 2 43 156 40 172 1.32e-22 95.9
Msa0350690 MtrunA17_Chr7g0259121 36.364 121 57 2 153 253 52 172 1.25e-14 72.8
Msa0350690 MtrunA17_Chr4g0037481 38.312 154 92 1 311 461 38 191 4.69e-33 124
Msa0350690 MtrunA17_Chr4g0037481 40.769 130 61 3 157 270 59 188 2.52e-23 97.1
Msa0350690 MtrunA17_Chr4g0037481 34.884 129 69 2 43 156 43 171 1.04e-19 87.0
Msa0350690 MtrunA17_Chr5g0446751 40.642 187 95 6 285 461 8 188 1.00e-32 122
Msa0350690 MtrunA17_Chr5g0446751 36.429 140 69 5 31 152 27 164 1.31e-17 80.9
Msa0350690 MtrunA17_Chr5g0446751 32.258 186 93 5 104 270 14 185 2.48e-16 77.0
Msa0350690 MtrunA17_Chr4g0005131 37.975 158 95 2 307 461 33 190 2.35e-29 113
Msa0350690 MtrunA17_Chr4g0005131 42.105 133 61 2 153 269 54 186 1.50e-21 92.0
Msa0350690 MtrunA17_Chr4g0005131 36.508 126 65 1 46 156 45 170 1.83e-19 86.3
Msa0350690 MtrunA17_Chr3g0136631 43.137 153 78 5 316 461 38 188 6.35e-29 112
Msa0350690 MtrunA17_Chr3g0136631 40.157 127 59 3 43 152 38 164 3.62e-19 85.1
Msa0350690 MtrunA17_Chr3g0136631 34.058 138 73 2 151 270 48 185 2.25e-15 74.3
Msa0350690 MtrunA17_Chr3g0136641 41.830 153 79 4 316 461 38 187 1.56e-27 108
Msa0350690 MtrunA17_Chr3g0136641 36.154 130 59 3 43 152 38 163 5.56e-16 76.3
Msa0350690 MtrunA17_Chr3g0136641 33.577 137 74 3 151 270 48 184 1.62e-15 74.7
Msa0350690 MtrunA17_Chr4g0068391 34.239 184 104 5 282 461 9 179 2.40e-23 96.7
Msa0350690 MtrunA17_Chr4g0068391 31.214 173 81 6 4 158 9 161 2.05e-14 71.2
Msa0350690 MtrunA17_Chr4g0024951 33.099 142 93 1 323 462 37 178 2.05e-20 88.6
Msa0350690 MtrunA17_Chr4g0024951 45.333 75 41 0 79 153 80 154 2.78e-14 70.9
Msa0350690 MtrunA17_Chr4g0024961 33.803 142 92 1 323 462 37 178 6.74e-20 87.0
Msa0350690 MtrunA17_Chr4g0024961 33.594 128 71 2 40 153 27 154 7.90e-14 69.7
Msa0350690 MtrunA17_Chr4g0068381 34.247 146 92 2 319 461 35 179 1.37e-19 86.3
Msa0350690 MtrunA17_Chr4g0068381 39.362 94 53 1 64 157 71 160 1.09e-13 69.3
Msa0350690 MtrunA17_Chr4g0005091 31.694 183 104 4 285 461 7 174 1.12e-18 83.6
Msa0350690 MtrunA17_Chr4g0005091 29.834 181 83 5 7 169 7 161 2.24e-12 65.5
Msa0350690 MtrunA17_Chr1g0169281 36.634 101 63 1 337 437 129 228 5.94e-12 65.9
Msa0350690 MtrunA17_Chr1g0169511 36.634 101 63 1 337 437 123 222 3.27e-11 63.5
Msa0350690 MtrunA17_Chr1g0169291 37.000 100 62 1 338 437 124 222 3.66e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0350690 AT1G65870.1 42.941 170 93 2 294 461 22 189 1.57e-42 149
Msa0350690 AT1G65870.1 39.286 140 71 2 31 156 30 169 3.38e-30 116
Msa0350690 AT1G65870.1 46.212 132 56 3 153 269 54 185 8.51e-25 101
Msa0350690 AT1G22900.1 44.516 155 82 2 309 461 41 193 1.80e-42 149
Msa0350690 AT1G22900.1 38.509 161 81 3 10 156 19 175 2.13e-30 117
Msa0350690 AT1G22900.1 40.152 132 62 4 153 269 60 189 5.53e-20 88.2
Msa0350690 AT5G42500.1 41.104 163 92 3 301 461 25 185 2.17e-39 140
Msa0350690 AT5G42500.1 40.000 135 67 2 36 156 33 167 7.58e-28 109
Msa0350690 AT5G42500.1 40.909 132 61 4 153 269 52 181 2.33e-21 91.7
Msa0350690 AT5G42510.1 41.935 155 86 3 309 461 30 182 1.18e-38 139
Msa0350690 AT5G42510.1 40.741 135 66 2 36 156 30 164 5.17e-28 110
Msa0350690 AT5G42510.1 39.394 132 63 3 153 269 49 178 1.86e-20 89.0
Msa0350690 AT2G21100.1 44.156 154 82 2 311 461 35 187 1.56e-37 135
Msa0350690 AT2G21100.1 41.085 129 61 2 157 270 56 184 3.50e-24 99.8
Msa0350690 AT2G21100.1 34.591 159 81 5 38 180 35 186 7.26e-21 90.5
Msa0350690 AT2G21100.2 44.156 154 82 2 311 461 35 187 1.56e-37 135
Msa0350690 AT2G21100.2 41.085 129 61 2 157 270 56 184 3.50e-24 99.8
Msa0350690 AT2G21100.2 34.591 159 81 5 38 180 35 186 7.26e-21 90.5
Msa0350690 AT1G58170.1 38.587 184 102 4 284 461 6 184 5.74e-36 131
Msa0350690 AT1G58170.1 36.420 162 84 4 9 156 8 164 9.68e-25 101
Msa0350690 AT1G58170.1 37.879 132 67 2 153 269 49 180 2.56e-19 85.9
Msa0350690 AT3G13650.1 39.865 148 88 1 314 461 39 185 5.50e-32 121
Msa0350690 AT3G13650.1 35.714 126 68 2 43 156 41 165 4.05e-21 91.3
Msa0350690 AT3G13650.1 37.500 128 66 2 153 267 53 179 7.45e-21 90.5
Msa0350690 AT1G55210.1 41.216 148 86 1 314 461 40 186 5.67e-31 118
Msa0350690 AT1G55210.1 33.533 167 94 4 6 157 3 167 2.61e-21 91.7
Msa0350690 AT1G55210.1 41.538 130 62 3 153 269 54 182 6.03e-20 87.8
Msa0350690 AT1G55210.2 41.216 148 86 1 314 461 40 186 5.67e-31 118
Msa0350690 AT1G55210.2 33.533 167 94 4 6 157 3 167 2.61e-21 91.7
Msa0350690 AT1G55210.2 41.538 130 62 3 153 269 54 182 6.03e-20 87.8
Msa0350690 AT3G58090.1 50.467 107 53 0 355 461 165 271 5.32e-30 118
Msa0350690 AT3G58090.1 37.324 142 80 3 17 156 117 251 8.92e-21 92.4
Msa0350690 AT3G58090.1 46.602 103 42 1 180 269 165 267 5.95e-20 90.1
Msa0350690 AT5G49040.1 40.000 130 76 1 314 441 41 170 1.45e-29 114
Msa0350690 AT5G49040.1 35.583 163 83 5 13 157 13 171 7.25e-22 93.2
Msa0350690 AT5G49040.1 39.844 128 61 4 153 264 55 182 1.04e-18 84.3
Msa0350690 AT3G13662.1 39.844 128 76 1 314 441 38 164 5.71e-27 107
Msa0350690 AT3G13662.1 36.641 131 64 3 43 158 40 166 8.58e-20 87.0
Msa0350690 AT3G13662.1 43.750 112 49 3 155 253 54 164 1.60e-17 80.5
Msa0350690 AT4G38700.1 38.710 155 85 4 316 461 36 189 1.55e-26 106
Msa0350690 AT4G38700.1 37.594 133 55 4 43 151 36 164 3.27e-18 82.8
Msa0350690 AT4G38700.1 36.296 135 65 4 157 270 52 186 4.11e-14 71.2
Msa0350690 AT5G49030.3 40.000 130 76 1 314 441 41 170 2.38e-26 113
Msa0350690 AT5G49030.3 35.583 163 83 5 13 157 13 171 8.36e-20 93.2
Msa0350690 AT5G49030.3 39.655 116 55 2 153 253 55 170 3.19e-16 82.0
Msa0350690 AT2G21110.1 35.897 156 92 2 313 461 31 185 6.27e-25 101
Msa0350690 AT2G21110.1 29.870 154 78 3 25 156 20 165 2.27e-15 74.7
Msa0350690 AT2G21110.1 31.343 134 73 2 156 270 49 182 5.19e-13 67.8
Msa0350690 AT3G13660.1 40.171 117 70 0 345 461 8 124 2.86e-23 95.1
Msa0350690 AT3G13660.1 38.596 114 57 2 169 269 7 120 4.70e-17 77.8
Msa0350690 AT3G13660.1 36.559 93 53 1 81 173 29 115 1.30e-14 70.9
Msa0350690 AT4G11210.1 33.858 127 71 3 155 269 52 177 5.60e-13 67.8
Msa0350690 AT4G11210.1 28.889 180 115 6 287 459 6 179 3.72e-12 65.5

Find 87 sgRNAs with CRISPR-Local

Find 631 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATCCATTAGCTACATTT+TGG 0.114675 3_1:-15972166 None:intergenic
CTTTCTTCACTTCAAGATCT+TGG 0.247590 3_1:+15981916 Msa0350690:CDS
ATGCTACTGCTAAGAGTCTT+TGG 0.272946 3_1:+15979282 Msa0350690:CDS
ACCCTTGAGCTCTTCCAATA+TGG 0.285187 3_1:-15981885 None:intergenic
ACTAATTCACCAAGTGGATT+TGG 0.298818 3_1:+15979005 Msa0350690:CDS
CAAAATGTAGCTAATGGATT+TGG 0.310756 3_1:+15972167 Msa0350690:CDS
ACCTCAATTGTTGGTGGAAC+TGG 0.317351 3_1:+15972398 Msa0350690:CDS
TACTCAACAACAAAATGTTC+AGG 0.343328 3_1:-15982120 None:intergenic
GGTAGAGCTCAAGGGATGTT+TGG 0.378489 3_1:+15979089 Msa0350690:CDS
GGAAGAGCTCAAGGGTTGTT+TGG 0.384818 3_1:+15981892 Msa0350690:CDS
CCACTTGGTGAATTAGTTGA+TGG 0.386177 3_1:-15978999 None:intergenic
TAATGTCATGGTAGTAGAAA+TGG 0.395728 3_1:-15981741 None:intergenic
AGCTCAAGGGATGTTTGGTT+TGG 0.396536 3_1:+15979094 Msa0350690:CDS
GGAAGAGCTCAAGGGATGTT+TGG 0.401132 3_1:+15972251 Msa0350690:CDS
CTCACACTCATTTCCACAAA+TGG 0.403874 3_1:+15981649 Msa0350690:CDS
ATGCCTATTGTTGGTGGAAC+TGG 0.410474 3_1:+15982039 Msa0350690:CDS
TGCTACTGCTAAGAGTCTTT+GGG 0.419480 3_1:+15979283 Msa0350690:CDS
GAGTTAAGTTCAAACCATAT+TGG 0.421016 3_1:+15981871 Msa0350690:CDS
AAAATGTTCAGGGGTAGAAA+TGG 0.424631 3_1:-15982109 None:intergenic
CTTCTCTATAGTTTGTTGTT+CGG 0.426647 3_1:-15972066 None:intergenic
ACACCCCAAAATGTAGCTAA+TGG 0.427402 3_1:+15972161 Msa0350690:CDS
AAAGTTGAACCAAATCCATT+AGG 0.430657 3_1:-15981817 None:intergenic
TCTCTAACAGTGTCTTGAAC+AGG 0.431116 3_1:-15979212 None:intergenic
GCTCTTGTTCCTCAGTTAAG+AGG 0.433473 3_1:-15979049 None:intergenic
TTTAATGAAGGGAAATATGC+TGG 0.436425 3_1:+15972323 Msa0350690:CDS
CTGCCTATTGTTGGTGGCAC+GGG 0.441961 3_1:+15979236 Msa0350690:CDS
ACACCAGTTCCACCAACAAT+AGG 0.442036 3_1:-15982042 None:intergenic
TGGAAGTAGTCTTAGTATGT+TGG 0.447026 3_1:+15981984 Msa0350690:CDS
TCTATAATTTGTACAACCGT+TGG 0.447701 3_1:-15978975 None:intergenic
TTGTGAGAAAACTCCATTTG+TGG 0.447942 3_1:-15981662 None:intergenic
GGAAGCACTCTTAGTATGTT+GGG 0.448120 3_1:+15972344 Msa0350690:CDS
ATCCCTTGAGCTCTACCAAC+AGG 0.451335 3_1:-15979083 None:intergenic
TGTGTTAGTTTCTCTGTTCG+TGG 0.453538 3_1:-15981715 None:intergenic
ACTCCCGTGCCACCAACAAT+AGG 0.455127 3_1:-15979239 None:intergenic
CTCTATAGTTTGTTGTTCGG+AGG 0.455137 3_1:-15972063 None:intergenic
CTCTGTTCGTGGTTGTTCTG+AGG 0.455164 3_1:-15981704 None:intergenic
TCTGTTCGTGGTTGTTCTGA+GGG 0.458437 3_1:-15981703 None:intergenic
GGAAGTAGTCTTAGTATGTT+GGG 0.468634 3_1:+15981985 Msa0350690:CDS
GGTAGTACTCTTAGTATGCT+TGG 0.469670 3_1:+15979182 Msa0350690:CDS
TTGGTGGCACGGGAGTGTTT+AGG 0.470502 3_1:+15979246 Msa0350690:CDS
TGTGTCAATGATTTGTACTA+TGG 0.471159 3_1:-15981782 None:intergenic
AATAGAGAAATGCCTATTGT+TGG 0.476777 3_1:+15982030 Msa0350690:CDS
AATAGAGAAACCTCAATTGT+TGG 0.478489 3_1:+15972389 Msa0350690:CDS
TTCTGAGGGTAATATGATGT+TGG 0.478821 3_1:-15981689 None:intergenic
AGAGTGTATGATGATAAATA+TGG 0.480301 3_1:+15972298 Msa0350690:CDS
ACCAGTTCCACCAACAATTG+AGG 0.483737 3_1:-15972399 None:intergenic
TGGAAGCACTCTTAGTATGT+TGG 0.496447 3_1:+15972343 Msa0350690:CDS
GTTAGAGAACTGCCTATTGT+TGG 0.513260 3_1:+15979227 Msa0350690:CDS
ATTTGGAACAACATTCATGA+TGG 0.515290 3_1:+15979022 Msa0350690:CDS
AAACCTGTTGGTAGAGCTCA+AGG 0.516264 3_1:+15979080 Msa0350690:CDS
AGAGAAATGCCTATTGTTGG+TGG 0.518085 3_1:+15982033 Msa0350690:CDS
ACTCAACTAACATCCACAAA+TGG 0.522303 3_1:+15972008 Msa0350690:CDS
CAATGATTTGTAACATGGTG+GGG 0.525613 3_1:-15972136 None:intergenic
AACCATATTGGAAGAGCTCA+AGG 0.526323 3_1:+15981883 Msa0350690:CDS
ATATGGTTTGAACTTAACTC+TGG 0.531516 3_1:-15981868 None:intergenic
TCAATGATTTGTACTATGGT+GGG 0.533940 3_1:-15981778 None:intergenic
ACTCAACAACAAAATGTTCA+GGG 0.537652 3_1:-15982119 None:intergenic
AAATGAGTGTGAGGGAGAAG+AGG 0.539387 3_1:-15981639 None:intergenic
AAACACATTGGAAGAGCTCA+AGG 0.544060 3_1:+15972242 Msa0350690:CDS
GTCAATGATTTGTACTATGG+TGG 0.552285 3_1:-15981779 None:intergenic
TCTATAGTTTGTTGTTCGGA+GGG 0.557097 3_1:-15972062 None:intergenic
GAGCTAACCTCAAAACCTGT+TGG 0.575184 3_1:+15979068 Msa0350690:CDS
CAATGATTTGTACTATGGTG+GGG 0.575820 3_1:-15981777 None:intergenic
TCAATGATTTGTAACATGGT+GGG 0.580239 3_1:-15972137 None:intergenic
AGAGAAACCTCAATTGTTGG+TGG 0.585679 3_1:+15972392 Msa0350690:CDS
ACTGCCTATTGTTGGTGGCA+CGG 0.589836 3_1:+15979235 Msa0350690:CDS
ATTTGTGGATGTTAGTTGAG+TGG 0.596424 3_1:-15972006 None:intergenic
AGAGAACTGCCTATTGTTGG+TGG 0.596697 3_1:+15979230 Msa0350690:CDS
GTCAATGATTTGTAACATGG+TGG 0.600362 3_1:-15972138 None:intergenic
GCACTCTTAGTATGTTGGGA+AGG 0.604095 3_1:+15972348 Msa0350690:CDS
GTAGTCTTAGTATGTTGGGA+AGG 0.607491 3_1:+15981989 Msa0350690:CDS
ATGGATGATGCAATGACTGA+AGG 0.615844 3_1:+15981844 Msa0350690:CDS
TGGATGATGCAATGACTGAA+GGG 0.619095 3_1:+15981845 Msa0350690:CDS
GAATTAAGTTCAAAACACAT+TGG 0.623480 3_1:+15972230 Msa0350690:CDS
CCATCAACTAATTCACCAAG+TGG 0.625731 3_1:+15978999 Msa0350690:CDS
CTCAACAACAAAATGTTCAG+GGG 0.634579 3_1:-15982118 None:intergenic
GGAGTGTTTAGGTTTGCTAG+AGG 0.636893 3_1:+15979257 Msa0350690:CDS
TTGAGTGGAAATGAGTGTGA+GGG 0.637117 3_1:-15971991 None:intergenic
GTTGAGTGGAAATGAGTGTG+AGG 0.650989 3_1:-15971992 None:intergenic
ACCATATTGGAAGAGCTCAA+GGG 0.658195 3_1:+15981884 Msa0350690:CDS
TGTGTCAATGATTTGTAACA+TGG 0.658635 3_1:-15972141 None:intergenic
AACACATTGGAAGAGCTCAA+GGG 0.674782 3_1:+15972243 Msa0350690:CDS
CATTTGTGGAAATGAGTGTG+AGG 0.677634 3_1:-15981648 None:intergenic
AATGTTGTTCCAAATCCACT+TGG 0.683285 3_1:-15979014 None:intergenic
AACCTGTTGGTAGAGCTCAA+GGG 0.691584 3_1:+15979081 Msa0350690:CDS
ATTTGTGGAAATGAGTGTGA+GGG 0.692176 3_1:-15981647 None:intergenic
GATGGACAACCTCTTAACTG+AGG 0.697477 3_1:+15979040 Msa0350690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTTATTAAAAAAAAA+AGG - chr3_1:15979801-15979820 None:intergenic 0.0%
!!! TTTTGATAAATTATTGATTT+TGG + chr3_1:15976239-15976258 Msa0350690:intron 10.0%
!! AAAAAATATTATTTAGATCT+AGG - chr3_1:15977400-15977419 None:intergenic 10.0%
!!! ATTTAGTGTTTTTTTTAATT+TGG + chr3_1:15977646-15977665 Msa0350690:intron 10.0%
!!! TGTTTTTATAATAAATTGTA+GGG - chr3_1:15978383-15978402 None:intergenic 10.0%
!!! TTGTTTTTATAATAAATTGT+AGG - chr3_1:15978384-15978403 None:intergenic 10.0%
!!! ATATATATTACATACAATTT+TGG - chr3_1:15979682-15979701 None:intergenic 10.0%
!! AAAAAAAACAAATGTATAAA+AGG + chr3_1:15980855-15980874 Msa0350690:intron 10.0%
!!! AATCCTTATAATTTTTTTTT+TGG - chr3_1:15980980-15980999 None:intergenic 10.0%
!!! ATAAATATGGTTTTTAATGA+AGG + chr3_1:15972311-15972330 Msa0350690:CDS 15.0%
!!! TAAATATGGTTTTTAATGAA+GGG + chr3_1:15972312-15972331 Msa0350690:CDS 15.0%
!!! TTTTTTAAAAGAGTCTTTTA+GGG - chr3_1:15972524-15972543 None:intergenic 15.0%
!!! AACTTTTTATAGTAAGAAAA+AGG + chr3_1:15972756-15972775 Msa0350690:intron 15.0%
!! AAAAAGGACAAAAAAAAAAA+AGG + chr3_1:15972772-15972791 Msa0350690:intron 15.0%
!!! CTAATATACATCATTTTATA+CGG - chr3_1:15973224-15973243 None:intergenic 15.0%
!! AAGGATAAGAATAAAAAATA+CGG - chr3_1:15974490-15974509 None:intergenic 15.0%
!!! GATAATAGTTAAATTTGTTT+TGG + chr3_1:15974536-15974555 Msa0350690:intron 15.0%
!! GACTAATAATTCATATTAAA+AGG - chr3_1:15974876-15974895 None:intergenic 15.0%
!!! TTCTTTTCTTTTAATGTTTT+AGG + chr3_1:15975180-15975199 Msa0350690:intron 15.0%
!! AAAAAAAAAATACAAAGACT+GGG - chr3_1:15976033-15976052 None:intergenic 15.0%
!! AAAAAAAAAAATACAAAGAC+TGG - chr3_1:15976034-15976053 None:intergenic 15.0%
!!! CTTATATTTTATTTTCCTTT+TGG + chr3_1:15976079-15976098 Msa0350690:intron 15.0%
!! TTTCATTTGTAATAATATGT+AGG + chr3_1:15976722-15976741 Msa0350690:intron 15.0%
!! AAGTATTTGAATAATTATCA+TGG + chr3_1:15977765-15977784 Msa0350690:intron 15.0%
!! AGTATTTGAATAATTATCAT+GGG + chr3_1:15977766-15977785 Msa0350690:intron 15.0%
!!! TATTTAAGTTGATAAAATCA+TGG + chr3_1:15977804-15977823 Msa0350690:intron 15.0%
!! TTATCTTGATATAATTAATG+TGG + chr3_1:15978109-15978128 Msa0350690:intron 15.0%
!!! GTTTTTATAATAAATTGTAG+GGG - chr3_1:15978382-15978401 None:intergenic 15.0%
!! ATAAATTAATTAAGAGACTT+GGG - chr3_1:15978474-15978493 None:intergenic 15.0%
!!! CATGAATTTTCATATATAAT+AGG + chr3_1:15979480-15979499 Msa0350690:intron 15.0%
!! ATTGCTATATATATGATATT+AGG - chr3_1:15980187-15980206 None:intergenic 15.0%
!! AAACTAATTTACATATCAAA+AGG + chr3_1:15980910-15980929 Msa0350690:intron 15.0%
!! AACTAATTTACATATCAAAA+GGG + chr3_1:15980911-15980930 Msa0350690:intron 15.0%
!!! TTATAATTTTTTTTTTGGAC+AGG - chr3_1:15980975-15980994 None:intergenic 15.0%
!! TGTCCAAAAAAAAAATTATA+AGG + chr3_1:15980974-15980993 Msa0350690:intron 15.0%
!!! TTGTTATATTTGTTTTTGAA+GGG - chr3_1:15981068-15981087 None:intergenic 15.0%
!!! TTTGTTATATTTGTTTTTGA+AGG - chr3_1:15981069-15981088 None:intergenic 15.0%
!!! TATTGAAAAACTTTTGATAA+AGG - chr3_1:15981182-15981201 None:intergenic 15.0%
!! AAAAATATTCTTACAAACAA+TGG + chr3_1:15981594-15981613 Msa0350690:CDS 15.0%
!!! GTTAACAAATTTTGTTTTTA+AGG + chr3_1:15981948-15981967 Msa0350690:CDS 15.0%
!!! CTTTTTTAAAAGAGTCTTTT+AGG - chr3_1:15972525-15972544 None:intergenic 20.0%
!!! TACTATTTTTTCCATTATCA+CGG + chr3_1:15973109-15973128 Msa0350690:intron 20.0%
!! AGATTAACATAAACCTAATA+TGG - chr3_1:15973194-15973213 None:intergenic 20.0%
!! AGAAAAAACAAAATTAACGA+TGG + chr3_1:15973514-15973533 Msa0350690:intron 20.0%
!! AAGATAACAAAAATTAGCAA+GGG - chr3_1:15973641-15973660 None:intergenic 20.0%
!! AAAGATAACAAAAATTAGCA+AGG - chr3_1:15973642-15973661 None:intergenic 20.0%
!! AAATTGTAAAATGTCCATTA+CGG - chr3_1:15974775-15974794 None:intergenic 20.0%
!! AAAACACATATATTCTGTAT+GGG - chr3_1:15974950-15974969 None:intergenic 20.0%
!! TAAAACACATATATTCTGTA+TGG - chr3_1:15974951-15974970 None:intergenic 20.0%
!! AAAAAAAAATACAAAGACTG+GGG - chr3_1:15976032-15976051 None:intergenic 20.0%
!!! GTTTTTTTTTTTAAGCCAAA+AGG - chr3_1:15976097-15976116 None:intergenic 20.0%
!! ATACAAAAATGAAAAGTAGA+TGG + chr3_1:15976652-15976671 Msa0350690:intron 20.0%
!! ATAATATCAGCATATTAACT+TGG + chr3_1:15976695-15976714 Msa0350690:intron 20.0%
!!! AATTATACAACATTTTACCT+AGG - chr3_1:15976897-15976916 None:intergenic 20.0%
!! AAACTAAAATTTCACTCTTT+AGG - chr3_1:15977606-15977625 None:intergenic 20.0%
!!! CAGTAAAGATTTGTTTAAAT+AGG + chr3_1:15977885-15977904 Msa0350690:intron 20.0%
!!! TTTTATATGACTATTTTTGC+CGG - chr3_1:15977948-15977967 None:intergenic 20.0%
!!! CAAGATAACATTCATATTTT+TGG - chr3_1:15978097-15978116 None:intergenic 20.0%
!!! ATGATTACTAACTTTTACTT+TGG + chr3_1:15978183-15978202 Msa0350690:intron 20.0%
!!! ATTTTTCTTGACAAGTATTA+TGG + chr3_1:15978214-15978233 Msa0350690:intron 20.0%
!!! AGTTATTTAAGTTAGATGTA+TGG - chr3_1:15978424-15978443 None:intergenic 20.0%
!! GATAAATTAATTAAGAGACT+TGG - chr3_1:15978475-15978494 None:intergenic 20.0%
!!! TTTTTGGATTGTTATTACTA+TGG + chr3_1:15979383-15979402 Msa0350690:intron 20.0%
!!! AAATATTTTTCTATCACCAA+TGG + chr3_1:15979628-15979647 Msa0350690:intron 20.0%
!! TTGAAATACTAAAAACTAGA+CGG + chr3_1:15979831-15979850 Msa0350690:intron 20.0%
!! TTGAAATACTAAAAACTAGA+CGG + chr3_1:15979831-15979850 Msa0350690:intron 20.0%
!! TTGAAATACTAAAAACTAGA+CGG + chr3_1:15979831-15979850 Msa0350690:intron 20.0%
!! TTGAAATACTAAAAACTAGA+CGG + chr3_1:15979831-15979850 Msa0350690:intron 20.0%
!!! ATTTTATCATGAATTTCCAT+TGG - chr3_1:15980160-15980179 None:intergenic 20.0%
!! TATCATATATATAGCAATGT+TGG + chr3_1:15980189-15980208 Msa0350690:intron 20.0%
!! ATCATATATATAGCAATGTT+GGG + chr3_1:15980190-15980209 Msa0350690:intron 20.0%
!!! ATTCCCTAATTTTTTTTTCT+TGG + chr3_1:15980318-15980337 Msa0350690:intron 20.0%
!! AAGCCAAGAAAAAAAAATTA+GGG - chr3_1:15980324-15980343 None:intergenic 20.0%
!!! ATTAGGTTAAAATTTTGTCT+TGG - chr3_1:15980434-15980453 None:intergenic 20.0%
!! TTAAGTATGAGACTTATTTA+AGG - chr3_1:15980497-15980516 None:intergenic 20.0%
!! TAATCATAGATAAAGATTCT+AGG - chr3_1:15980822-15980841 None:intergenic 20.0%
!! AAATGAGTAAATCATCAAAT+TGG + chr3_1:15981091-15981110 Msa0350690:intron 20.0%
!!! TTGTTAAAAGTTTTTCACTT+AGG - chr3_1:15981243-15981262 None:intergenic 20.0%
!! TTTCTCTTTATATACTTCAA+CGG + chr3_1:15981548-15981567 Msa0350690:intron 20.0%
!!! AACAAATTTTGTTTTTAAGG+AGG + chr3_1:15981951-15981970 Msa0350690:CDS 20.0%
!!! ACAAATTTTGTTTTTAAGGA+GGG + chr3_1:15981952-15981971 Msa0350690:CDS 20.0%
! TAATGTCATGGTAGTAAAAA+TGG - chr3_1:15972103-15972122 None:intergenic 25.0%
!! AAATCCATTAGCTACATTTT+GGG - chr3_1:15972168-15972187 None:intergenic 25.0%
!!! ATTTGGTTCAACTTTTATGA+TGG + chr3_1:15972184-15972203 Msa0350690:intron 25.0%
!!! ATGTGTTTTGAACTTAATTC+TGG - chr3_1:15972230-15972249 None:intergenic 25.0%
! GAATTAAGTTCAAAACACAT+TGG + chr3_1:15972230-15972249 Msa0350690:CDS 25.0%
! AGAGTGTATGATGATAAATA+TGG + chr3_1:15972298-15972317 Msa0350690:CDS 25.0%
!!! TCTCTATTTTGTTTGGTAAT+AGG - chr3_1:15972377-15972396 None:intergenic 25.0%
!!! TTTTAAAAAAGAGTTCGAGA+TGG + chr3_1:15972534-15972553 Msa0350690:intron 25.0%
! AAGGACAAAAAAAAAAAAGG+TGG + chr3_1:15972775-15972794 Msa0350690:intron 25.0%
!!! AACAACTTGTTAACATCTAA+AGG + chr3_1:15972824-15972843 Msa0350690:intron 25.0%
!!! ACAACTTGTTAACATCTAAA+GGG + chr3_1:15972825-15972844 Msa0350690:intron 25.0%
! GATAAGAAGACAAAATGAAT+TGG + chr3_1:15972949-15972968 Msa0350690:intron 25.0%
! TTTCAAAAAACCCAAAACTT+TGG - chr3_1:15973055-15973074 None:intergenic 25.0%
!!! AAGTTTTGGGTTTTTTGAAA+TGG + chr3_1:15973055-15973074 Msa0350690:intron 25.0%
! AAATAGTTCTTAGCTATACT+AGG + chr3_1:15973082-15973101 Msa0350690:intron 25.0%
!! ATCAAACCATTTTCCATATT+AGG + chr3_1:15973178-15973197 Msa0350690:intron 25.0%
! CATAAACCTAATATGGAAAA+TGG - chr3_1:15973187-15973206 None:intergenic 25.0%
! TTAGAATTAGAGTAGACATA+TGG - chr3_1:15973281-15973300 None:intergenic 25.0%
!! CATTTAAGATAGGATGAAAA+TGG - chr3_1:15973338-15973357 None:intergenic 25.0%
!!! GTGAAAGTTTAGATTTTGAT+GGG - chr3_1:15973427-15973446 None:intergenic 25.0%
! GAAGTTAAAATTGTATCCTT+GGG - chr3_1:15973449-15973468 None:intergenic 25.0%
! TGAAGTTAAAATTGTATCCT+TGG - chr3_1:15973450-15973469 None:intergenic 25.0%
! AGAGAAAATAGGATACTAAA+AGG + chr3_1:15973737-15973756 Msa0350690:intron 25.0%
! ATCAACAACAATTATCACTT+TGG + chr3_1:15973809-15973828 Msa0350690:intron 25.0%
! AAGTATGATAAGTACAATCT+GGG - chr3_1:15973929-15973948 None:intergenic 25.0%
! CAAAAGATGTAATATGACTA+CGG - chr3_1:15974127-15974146 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - chr3_1:15974674-15974693 None:intergenic 25.0%
! CATTGCATGATATACAATTT+GGG - chr3_1:15974906-15974925 None:intergenic 25.0%
! ACATTGCATGATATACAATT+TGG - chr3_1:15974907-15974926 None:intergenic 25.0%
! ACATTGAAAGACATATAATC+CGG - chr3_1:15975127-15975146 None:intergenic 25.0%
!!! TTTTTCAACAAGGGTAAAAT+TGG - chr3_1:15975262-15975281 None:intergenic 25.0%
!! TAAAGTTTAAAACTAGCGAA+TGG - chr3_1:15975819-15975838 None:intergenic 25.0%
!!! TCGCTAGTTTTAAACTTTAA+CGG + chr3_1:15975820-15975839 Msa0350690:intron 25.0%
!! TACAAAAAAAGTGTGAAAAG+TGG - chr3_1:15975860-15975879 None:intergenic 25.0%
!!! TTCACACTTTTTTTGTAATC+TGG + chr3_1:15975863-15975882 Msa0350690:intron 25.0%
!!! GTGATTAGTGTATTTTTGTT+AGG + chr3_1:15975922-15975941 Msa0350690:intron 25.0%
! AAAAAAAATACAAAGACTGG+GGG - chr3_1:15976031-15976050 None:intergenic 25.0%
!! TTATTGTTGATTAGTTGCTT+TGG + chr3_1:15976445-15976464 Msa0350690:intron 25.0%
! ATATTCTTACACATCATTGA+AGG - chr3_1:15976625-15976644 None:intergenic 25.0%
! TATCTCAATTTCGTATATTG+TGG - chr3_1:15976769-15976788 None:intergenic 25.0%
! AAATTGAGATAGATGTTGAA+TGG + chr3_1:15976778-15976797 Msa0350690:intron 25.0%
!! GCAAAAATTTTATCCGTTTA+AGG + chr3_1:15976958-15976977 Msa0350690:intron 25.0%
!!! TTTTTTATTACAGGAAGCTT+TGG + chr3_1:15977414-15977433 Msa0350690:intron 25.0%
! TCAAATACTTTGCCAAAAAT+TGG - chr3_1:15977755-15977774 None:intergenic 25.0%
! TAAAAAACCAACAATAGTTC+CGG + chr3_1:15977926-15977945 Msa0350690:intron 25.0%
! TCTTCATCGTTTAAACAATA+TGG - chr3_1:15977988-15978007 None:intergenic 25.0%
!!! ATCCATTTTAATGATATACG+AGG + chr3_1:15978157-15978176 Msa0350690:intron 25.0%
! TACCTCGTATATCATTAAAA+TGG - chr3_1:15978162-15978181 None:intergenic 25.0%
! CAATATAAGTAGTTAACAAG+TGG + chr3_1:15978315-15978334 Msa0350690:intron 25.0%
!!! CGATTTTATTTTAGATGGTA+GGG - chr3_1:15978594-15978613 None:intergenic 25.0%
!! CCTACCATCTAAAATAAAAT+CGG + chr3_1:15978592-15978611 Msa0350690:intron 25.0%
!!! CAATCCGATTTTATTTTAGA+TGG - chr3_1:15978599-15978618 None:intergenic 25.0%
! GATAAGTGGATATAACTTTA+CGG - chr3_1:15978764-15978783 None:intergenic 25.0%
! TATATCCACTTATCTTCAAA+TGG + chr3_1:15978770-15978789 Msa0350690:intron 25.0%
! TAATTAACATAACCATTCCA+CGG - chr3_1:15979133-15979152 None:intergenic 25.0%
! GGATCTTGAATAAATTTCTT+GGG + chr3_1:15979652-15979671 Msa0350690:intron 25.0%
! GATCTTGAATAAATTTCTTG+GGG + chr3_1:15979653-15979672 Msa0350690:intron 25.0%
! ATCTTGAATAAATTTCTTGG+GGG + chr3_1:15979654-15979673 Msa0350690:intron 25.0%
! TAAAAAAAAAAGGTTCCTGT+GGG - chr3_1:15979791-15979810 None:intergenic 25.0%
! TTAAAAAAAAAAGGTTCCTG+TGG - chr3_1:15979792-15979811 None:intergenic 25.0%
! ATCTTTCATTGAAATTGTGT+GGG - chr3_1:15980118-15980137 None:intergenic 25.0%
! ACACAATTTCAATGAAAGAT+CGG + chr3_1:15980118-15980137 Msa0350690:intron 25.0%
! TCATATATATAGCAATGTTG+GGG + chr3_1:15980191-15980210 Msa0350690:intron 25.0%
! CAAGCCAAGAAAAAAAAATT+AGG - chr3_1:15980325-15980344 None:intergenic 25.0%
! TTTAACCTAATTAGTGACAA+TGG + chr3_1:15980443-15980462 Msa0350690:intron 25.0%
!! TTATTTAAGGCATGTCAAAA+TGG - chr3_1:15980484-15980503 None:intergenic 25.0%
! GACATTACATAATATATGCA+GGG + chr3_1:15980644-15980663 Msa0350690:intron 25.0%
! ACATTACATAATATATGCAG+GGG + chr3_1:15980645-15980664 Msa0350690:intron 25.0%
! ATATTAAATGTGGACAAGTT+GGG - chr3_1:15980692-15980711 None:intergenic 25.0%
! TAAAAAATTCCATCATGTGA+AGG - chr3_1:15980778-15980797 None:intergenic 25.0%
! AGTAAATCATCAAATTGGTT+CGG + chr3_1:15981096-15981115 Msa0350690:intron 25.0%
! CAAACAAAATATATTTGCCT+AGG + chr3_1:15981353-15981372 Msa0350690:intron 25.0%
!!! ATGTTTGATAGGGTTTTTTT+GGG - chr3_1:15981525-15981544 None:intergenic 25.0%
!!! AATGTTTGATAGGGTTTTTT+TGG - chr3_1:15981526-15981545 None:intergenic 25.0%
! AGAGAAAGAAATGTTTGATA+GGG - chr3_1:15981535-15981554 None:intergenic 25.0%
! AAGAGAAAGAAATGTTTGAT+AGG - chr3_1:15981536-15981555 None:intergenic 25.0%
! ACGGAAATAAAATTACTCAA+AGG + chr3_1:15981567-15981586 Msa0350690:intron 25.0%
!! AATCCATTAGGTACATTTTT+GGG - chr3_1:15981808-15981827 None:intergenic 25.0%
!! AAATCCATTAGGTACATTTT+TGG - chr3_1:15981809-15981828 None:intergenic 25.0%
!!! AAAAATGTACCTAATGGATT+TGG + chr3_1:15981808-15981827 Msa0350690:CDS 25.0%
!!! ATTTGGTTCAACTTTTATGA+TGG + chr3_1:15972184-15972203 Msa0350690:intron 25.0%
!!! CAAATTTTGTTTTTAAGGAG+GGG + chr3_1:15981953-15981972 Msa0350690:CDS 25.0%
!!! AAATTTTGTTTTTAAGGAGG+GGG + chr3_1:15981954-15981973 Msa0350690:CDS 25.0%
!! TCTCTATTTTGTTCAGAAAT+AGG - chr3_1:15982018-15982037 None:intergenic 25.0%
!! TTTTGAGAAATCTCCATTTG+TGG - chr3_1:15972024-15972043 None:intergenic 30.0%
!! CTTCTCTATAGTTTGTTGTT+CGG - chr3_1:15972069-15972088 None:intergenic 30.0%
! TTTTACTACCATGACATTAG+AGG + chr3_1:15972104-15972123 Msa0350690:CDS 30.0%
! TCAATGATTTGTAACATGGT+GGG - chr3_1:15972140-15972159 None:intergenic 30.0%
! TGTGTCAATGATTTGTAACA+TGG - chr3_1:15972144-15972163 None:intergenic 30.0%
! AATCCATTAGCTACATTTTG+GGG - chr3_1:15972167-15972186 None:intergenic 30.0%
! CAAATCCATTAGCTACATTT+TGG - chr3_1:15972169-15972188 None:intergenic 30.0%
!! CAAAATGTAGCTAATGGATT+TGG + chr3_1:15972167-15972186 Msa0350690:CDS 30.0%
TTTAATGAAGGGAAATATGC+TGG + chr3_1:15972323-15972342 Msa0350690:CDS 30.0%
! TGAGGTTTCTCTATTTTGTT+TGG - chr3_1:15972384-15972403 None:intergenic 30.0%
AATAGAGAAACCTCAATTGT+TGG + chr3_1:15972389-15972408 Msa0350690:CDS 30.0%
!!! GTATTTTCAGATTTGCTAGA+GGG + chr3_1:15972420-15972439 Msa0350690:CDS 30.0%
ATAATGTTCAGGAGTAGAAA+TGG - chr3_1:15972471-15972490 None:intergenic 30.0%
TACTCAACAACATAATGTTC+AGG - chr3_1:15972482-15972501 None:intergenic 30.0%
! AGTCAATTAAGCCAAAGTTT+TGG + chr3_1:15973041-15973060 Msa0350690:intron 30.0%
! GTCAATTAAGCCAAAGTTTT+GGG + chr3_1:15973042-15973061 Msa0350690:intron 30.0%
TAAAGTTCAAACCGTGATAA+TGG - chr3_1:15973123-15973142 None:intergenic 30.0%
! CTATAAACGTTGATTACTTG+CGG + chr3_1:15973308-15973327 Msa0350690:intron 30.0%
! CAGTTCGAAACATTTAAGAT+AGG - chr3_1:15973348-15973367 None:intergenic 30.0%
! GGTGAAAGTTTAGATTTTGA+TGG - chr3_1:15973428-15973447 None:intergenic 30.0%
AAAATCTAAACTTTCACCCA+AGG + chr3_1:15973430-15973449 Msa0350690:intron 30.0%
TTAACGATGGAAATTAGTGA+CGG + chr3_1:15973527-15973546 Msa0350690:intron 30.0%
ATTTAGTGTACGAATTAGAG+AGG + chr3_1:15973588-15973607 Msa0350690:intron 30.0%
TTAGCAAGGGAAATTTATTG+AGG - chr3_1:15973628-15973647 None:intergenic 30.0%
ACAACAATTATCACTTTGGA+TGG + chr3_1:15973813-15973832 Msa0350690:intron 30.0%
!!! GTAAATGCTATTTTAGCGTT+TGG - chr3_1:15973858-15973877 None:intergenic 30.0%
GAAGTATGATAAGTACAATC+TGG - chr3_1:15973930-15973949 None:intergenic 30.0%
TATCATACTTCAACAAGCAT+TGG + chr3_1:15973939-15973958 Msa0350690:intron 30.0%
ATCATACTTCAACAAGCATT+GGG + chr3_1:15973940-15973959 Msa0350690:intron 30.0%
!!! GAAAATATGTCAGTTTTGGA+GGG + chr3_1:15974206-15974225 Msa0350690:intron 30.0%
!!! AAAATATGTCAGTTTTGGAG+GGG + chr3_1:15974207-15974226 Msa0350690:intron 30.0%
ATCCTTCTTGTATTGAACAT+TGG + chr3_1:15974504-15974523 Msa0350690:intron 30.0%
AACCAATGTTCAATACAAGA+AGG - chr3_1:15974509-15974528 None:intergenic 30.0%
CATTGAAATGCATACAATCT+GGG - chr3_1:15974581-15974600 None:intergenic 30.0%
ACATTGAAATGCATACAATC+TGG - chr3_1:15974582-15974601 None:intergenic 30.0%
! CTTTTGCTTATAATAGTGAC+CGG + chr3_1:15974711-15974730 Msa0350690:intron 30.0%
TAAAACACATATACTTCCTC+CGG - chr3_1:15974733-15974752 None:intergenic 30.0%
CATTGAAAGACATATAATCC+GGG - chr3_1:15975126-15975145 None:intergenic 30.0%
!! ATAGAGAGAGTATTCTGTAA+GGG - chr3_1:15975160-15975179 None:intergenic 30.0%
!! AATAGAGAGAGTATTCTGTA+AGG - chr3_1:15975161-15975180 None:intergenic 30.0%
!! AATGGTGTGTTTTTCAACAA+GGG - chr3_1:15975271-15975290 None:intergenic 30.0%
!! AAATGGTGTGTTTTTCAACA+AGG - chr3_1:15975272-15975291 None:intergenic 30.0%
!! AACACACCATTTAATTTGTG+TGG + chr3_1:15975280-15975299 Msa0350690:intron 30.0%
GTGTCAATAATTAAGGAGAT+TGG + chr3_1:15975306-15975325 Msa0350690:intron 30.0%
CCAAAAGTTGGATAAAACAA+GGG - chr3_1:15975339-15975358 None:intergenic 30.0%
ACCAAAAGTTGGATAAAACA+AGG - chr3_1:15975340-15975359 None:intergenic 30.0%
!! GTTTTATCCAACTTTTGGTT+TGG + chr3_1:15975341-15975360 Msa0350690:intron 30.0%
GATAAATTAGTCCTATCTAG+TGG - chr3_1:15975964-15975983 None:intergenic 30.0%
AAAAAAATACAAAGACTGGG+GGG - chr3_1:15976030-15976049 None:intergenic 30.0%
ACTTGGGAAACATATAAGTT+CGG + chr3_1:15976187-15976206 Msa0350690:intron 30.0%
CTATAAACAACATGTGTGAT+GGG + chr3_1:15976268-15976287 Msa0350690:intron 30.0%
GGTTCAAAGGTTATATTGAA+TGG + chr3_1:15976310-15976329 Msa0350690:intron 30.0%
TATATTGAATGGCAATCTAC+TGG + chr3_1:15976321-15976340 Msa0350690:intron 30.0%
!! AGTTGCTTTGGTTTGTTATT+AGG + chr3_1:15976457-15976476 Msa0350690:intron 30.0%
GTTATTAGGATGAATAACAG+AGG + chr3_1:15976471-15976490 Msa0350690:intron 30.0%
TTTCGCAGATCATCAATTAT+TGG - chr3_1:15976546-15976565 None:intergenic 30.0%
GAAGGAAAAAAATCTCACTT+CGG - chr3_1:15976607-15976626 None:intergenic 30.0%
TAAGTTGCACGTAATTGTTA+TGG + chr3_1:15976983-15977002 Msa0350690:intron 30.0%
CGTATTATGACTCAGTTTAA+CGG + chr3_1:15977041-15977060 Msa0350690:intron 30.0%
GAAATGTGAATTGGAAGTTT+AGG + chr3_1:15977101-15977120 Msa0350690:intron 30.0%
AACCAACTTATATGGTTTAG+TGG - chr3_1:15977568-15977587 None:intergenic 30.0%
!! TTTGGTTCAGACTTTTGATT+TGG + chr3_1:15977664-15977683 Msa0350690:intron 30.0%
! GTAAGACTTATGCCAATTTT+TGG + chr3_1:15977740-15977759 Msa0350690:intron 30.0%
AGTATTATGGACATACGAAA+TGG + chr3_1:15978227-15978246 Msa0350690:intron 30.0%
AAGTAGTTAACAAGTGGAAA+TGG + chr3_1:15978321-15978340 Msa0350690:intron 30.0%
!!! CCGATTTTATTTTAGATGGT+AGG - chr3_1:15978595-15978614 None:intergenic 30.0%
!! AACGTTCTCTTTTGTCATTT+TGG + chr3_1:15978678-15978697 Msa0350690:intron 30.0%
TAACATGATGTTGGATTGTT+CGG - chr3_1:15978880-15978899 None:intergenic 30.0%
!! ATTTGTTGGTAACATGATGT+TGG - chr3_1:15978889-15978908 None:intergenic 30.0%
!! TCAGTGCTTTGTTTATTTGT+TGG - chr3_1:15978903-15978922 None:intergenic 30.0%
! ATGGTAAAAAAAGTGCAAGT+GGG - chr3_1:15978934-15978953 None:intergenic 30.0%
! TTTTACCATGACATCTTAGA+AGG + chr3_1:15978945-15978964 Msa0350690:intron 30.0%
!!! TTTTACCTTCTAAGATGTCA+TGG - chr3_1:15978953-15978972 None:intergenic 30.0%
CTTAGAAGGTAAAAATCCAA+CGG + chr3_1:15978959-15978978 Msa0350690:intron 30.0%
! TCTATAATTTGTACAACCGT+TGG - chr3_1:15978978-15978997 None:intergenic 30.0%
! ATTTGGAACAACATTCATGA+TGG + chr3_1:15979022-15979041 Msa0350690:CDS 30.0%
ATTAATCTTGCTTTCACTGA+AGG + chr3_1:15979149-15979168 Msa0350690:intron 30.0%
AAGAACTTGCAAGATTTCTA+TGG - chr3_1:15979362-15979381 None:intergenic 30.0%
!!! ATCTTGCAAGTTCTTGTTTT+TGG + chr3_1:15979367-15979386 Msa0350690:intron 30.0%
CCATAAACTCATAAAGTCTA+TGG - chr3_1:15979412-15979431 None:intergenic 30.0%
CCATAGACTTTATGAGTTTA+TGG + chr3_1:15979409-15979428 Msa0350690:intron 30.0%
TCTATGTGAAATACAGTTGA+TGG - chr3_1:15979545-15979564 None:intergenic 30.0%
! TATTTTTCTATCACCAATGG+CGG + chr3_1:15979631-15979650 Msa0350690:intron 30.0%
CGGATCTTGAATAAATTTCT+TGG + chr3_1:15979651-15979670 Msa0350690:intron 30.0%
AAAAAAAAAAGGTTCCTGTG+GGG - chr3_1:15979790-15979809 None:intergenic 30.0%
AAATACTAAAAACTAGACGG+AGG + chr3_1:15979883-15979902 Msa0350690:intron 30.0%
AATACTAAAAACTAGACGGA+GGG + chr3_1:15979884-15979903 Msa0350690:intron 30.0%
AAATACTAAAAACTAGACGG+AGG + chr3_1:15979883-15979902 Msa0350690:intron 30.0%
AATACTAAAAACTAGACGGA+GGG + chr3_1:15979884-15979903 Msa0350690:intron 30.0%
AAATACTAAAAACTAGACGG+AGG + chr3_1:15979883-15979902 Msa0350690:intron 30.0%
AATACTAAAAACTAGACGGA+GGG + chr3_1:15979884-15979903 Msa0350690:intron 30.0%
AAATACTAAAAACTAGACGG+AGG + chr3_1:15979883-15979902 Msa0350690:intron 30.0%
GATCTTTCATTGAAATTGTG+TGG - chr3_1:15980119-15980138 None:intergenic 30.0%
CATATATATAGCAATGTTGG+GGG + chr3_1:15980192-15980211 Msa0350690:intron 30.0%
TGATTCCATTGTCACTAATT+AGG - chr3_1:15980451-15980470 None:intergenic 30.0%
ACTATGTTCCGTAACAAATT+AGG - chr3_1:15980531-15980550 None:intergenic 30.0%
GGACATTACATAATATATGC+AGG + chr3_1:15980643-15980662 Msa0350690:intron 30.0%
CATATTAAATGTGGACAAGT+TGG - chr3_1:15980693-15980712 None:intergenic 30.0%
TAGCTCACACATATTAAATG+TGG - chr3_1:15980702-15980721 None:intergenic 30.0%
! ATAGATAAAGATTCTAGGAG+CGG - chr3_1:15980817-15980836 None:intergenic 30.0%
TAATGTCATGGTAGTAGAAA+TGG - chr3_1:15981744-15981763 None:intergenic 30.0%
!! TTTTGTTGTCTCTAATGTCA+TGG - chr3_1:15981756-15981775 None:intergenic 30.0%
! TCAATGATTTGTACTATGGT+GGG - chr3_1:15981781-15981800 None:intergenic 30.0%
! TGTGTCAATGATTTGTACTA+TGG - chr3_1:15981785-15981804 None:intergenic 30.0%
AAAGTTGAACCAAATCCATT+AGG - chr3_1:15972179-15972198 None:intergenic 30.0%
ATATGGTTTGAACTTAACTC+TGG - chr3_1:15981871-15981890 None:intergenic 30.0%
GAGTTAAGTTCAAACCATAT+TGG + chr3_1:15981871-15981890 Msa0350690:CDS 30.0%
AATAGAGAAATGCCTATTGT+TGG + chr3_1:15982030-15982049 Msa0350690:CDS 30.0%
!!! GTGTTTTTAGATTTGCTAGA+GGG + chr3_1:15982061-15982080 Msa0350690:CDS 30.0%
ACTCAACAACAAAATGTTCA+GGG - chr3_1:15979319-15979338 None:intergenic 30.0%
TACTCAACAACAAAATGTTC+AGG - chr3_1:15979320-15979339 None:intergenic 30.0%
ATTTGTGGATGTTAGTTGAG+TGG - chr3_1:15972009-15972028 None:intergenic 35.0%
ACTCAACTAACATCCACAAA+TGG + chr3_1:15972008-15972027 Msa0350690:CDS 35.0%
!! TCTATAGTTTGTTGTTCGGA+GGG - chr3_1:15972065-15972084 None:intergenic 35.0%
! TTTTGTTGCCTCTAATGTCA+TGG - chr3_1:15972115-15972134 None:intergenic 35.0%
! CAATGATTTGTAACATGGTG+GGG - chr3_1:15972139-15972158 None:intergenic 35.0%
! GTCAATGATTTGTAACATGG+TGG - chr3_1:15972141-15972160 None:intergenic 35.0%
!!! GGTATTTTCAGATTTGCTAG+AGG + chr3_1:15972419-15972438 Msa0350690:CDS 35.0%
!!! TCTTTTTTGAGTGAGCACTT+TGG + chr3_1:15972598-15972617 Msa0350690:intron 35.0%
!!! CTTTTTTGAGTGAGCACTTT+GGG + chr3_1:15972599-15972618 Msa0350690:intron 35.0%
! GCGAACTCACTAAAATTTTC+AGG - chr3_1:15972853-15972872 None:intergenic 35.0%
!! CGTGATTTGGAACTTTTGAA+AGG - chr3_1:15972885-15972904 None:intergenic 35.0%
TCAAGGTGTATACACATTTG+AGG - chr3_1:15973683-15973702 None:intergenic 35.0%
GAGAGAGATAGAGAGAAAAT+AGG + chr3_1:15973726-15973745 Msa0350690:intron 35.0%
!!! AATGCTATTTTAGCGTTTGG+AGG - chr3_1:15973855-15973874 None:intergenic 35.0%
TCATAAACAACCCTCACTAT+TGG + chr3_1:15974001-15974020 Msa0350690:intron 35.0%
! GAGGGAAAATATGTCAGTTT+TGG + chr3_1:15974202-15974221 Msa0350690:intron 35.0%
!! GGAAAATATGTCAGTTTTGG+AGG + chr3_1:15974205-15974224 Msa0350690:intron 35.0%
!!! AAATATGTCAGTTTTGGAGG+GGG + chr3_1:15974208-15974227 Msa0350690:intron 35.0%
AAAGTGAATGACATCGAGTA+AGG - chr3_1:15974243-15974262 None:intergenic 35.0%
ATCTTTACATTCCAACTTCG+TGG + chr3_1:15974391-15974410 Msa0350690:intron 35.0%
TGCTTATAATAGTGACCAGA+GGG - chr3_1:15974639-15974658 None:intergenic 35.0%
TTGCTTATAATAGTGACCAG+AGG - chr3_1:15974640-15974659 None:intergenic 35.0%
GACATAAACATGAAAGACGA+CGG - chr3_1:15975076-15975095 None:intergenic 35.0%
AATTATGAGCTTTCCTATCC+CGG + chr3_1:15975105-15975124 Msa0350690:intron 35.0%
AAAGACATATAATCCGGGAT+AGG - chr3_1:15975121-15975140 None:intergenic 35.0%
CACTCACCACACAAATTAAA+TGG - chr3_1:15975289-15975308 None:intergenic 35.0%
GTGGTGAGTGTCAATAATTA+AGG + chr3_1:15975299-15975318 Msa0350690:intron 35.0%
!!! CCCTTGTTTTATCCAACTTT+TGG + chr3_1:15975336-15975355 Msa0350690:intron 35.0%
AAAGTCACCAAACCAAAAGT+TGG - chr3_1:15975351-15975370 None:intergenic 35.0%
TTTCTTGTACAACACAGGTT+GGG + chr3_1:15975556-15975575 Msa0350690:intron 35.0%
TTGTGTATCATAAACCCGAA+AGG + chr3_1:15975610-15975629 Msa0350690:intron 35.0%
TGTGTATCATAAACCCGAAA+GGG + chr3_1:15975611-15975630 Msa0350690:intron 35.0%
TTAAACGAACCAAACCCTTT+CGG - chr3_1:15975628-15975647 None:intergenic 35.0%
! TTTGGTTCGTTTAACCCAAA+AGG + chr3_1:15975634-15975653 Msa0350690:intron 35.0%
! TTGGTTCGTTTAACCCAAAA+GGG + chr3_1:15975635-15975654 Msa0350690:intron 35.0%
TTAGAGTTGTTCCACTAGAT+AGG + chr3_1:15975950-15975969 Msa0350690:intron 35.0%
TATCACGATATATTCCCGTT+TGG + chr3_1:15975980-15975999 Msa0350690:intron 35.0%
ATCACGATATATTCCCGTTT+GGG + chr3_1:15975981-15976000 Msa0350690:intron 35.0%
AAAATGGCAGGAACTAAGTA+AGG - chr3_1:15976138-15976157 None:intergenic 35.0%
!! TTACTTAGTTCCTGCCATTT+TGG + chr3_1:15976137-15976156 Msa0350690:intron 35.0%
AATTGCAAAACCAAAATGGC+AGG - chr3_1:15976150-15976169 None:intergenic 35.0%
GCAGAATTGCAAAACCAAAA+TGG - chr3_1:15976154-15976173 None:intergenic 35.0%
TGCAAAACGAGAACATACTT+GGG + chr3_1:15976171-15976190 Msa0350690:intron 35.0%
CTTGGGAAACATATAAGTTC+GGG + chr3_1:15976188-15976207 Msa0350690:intron 35.0%
TTGGGAAACATATAAGTTCG+GGG + chr3_1:15976189-15976208 Msa0350690:intron 35.0%
! CCATCACACATGTTGTTTAT+AGG - chr3_1:15976270-15976289 None:intergenic 35.0%
CCTATAAACAACATGTGTGA+TGG + chr3_1:15976267-15976286 Msa0350690:intron 35.0%
TAACTCATTCTACGGTTCAA+AGG + chr3_1:15976297-15976316 Msa0350690:intron 35.0%
!! TCGTTGGTAACGATTGATAA+TGG + chr3_1:15976828-15976847 Msa0350690:intron 35.0%
!! ACTACAAGAGTGTTATTCCT+AGG + chr3_1:15976877-15976896 Msa0350690:intron 35.0%
CGTGCAACTTAAACCTTAAA+CGG - chr3_1:15976974-15976993 None:intergenic 35.0%
GTAATTGTTATGGATGTGAC+TGG + chr3_1:15976993-15977012 Msa0350690:intron 35.0%
TTTGTTAGATGCAATTGACC+AGG + chr3_1:15977079-15977098 Msa0350690:intron 35.0%
ATTGACCAGGAAATGTGAAT+TGG + chr3_1:15977092-15977111 Msa0350690:intron 35.0%
AACTTCCAATTCACATTTCC+TGG - chr3_1:15977100-15977119 None:intergenic 35.0%
!! TTCATCAATAGCCTTGTTGA+CGG - chr3_1:15977134-15977153 None:intergenic 35.0%
AGACATAATTCAGCAGTTCA+TGG + chr3_1:15977156-15977175 Msa0350690:intron 35.0%
ACCACGTCATTATTAGTCAT+CGG - chr3_1:15977332-15977351 None:intergenic 35.0%
!!! GTAGTTTTGGACATACAAAC+TGG - chr3_1:15977367-15977386 None:intergenic 35.0%
! AGGCGAACATATTGTAGTTT+TGG - chr3_1:15977380-15977399 None:intergenic 35.0%
TTCAACAGCAACAACATCAT+CGG - chr3_1:15977529-15977548 None:intergenic 35.0%
TGCCACTAAACCATATAAGT+TGG + chr3_1:15977563-15977582 Msa0350690:intron 35.0%
! ATTTTTGCCGGAACTATTGT+TGG - chr3_1:15977936-15977955 None:intergenic 35.0%
TAAGAATGTGACGTCAAATG+TGG + chr3_1:15978017-15978036 Msa0350690:intron 35.0%
CCACGCACTTAAAAGAAATA+CGG - chr3_1:15978137-15978156 None:intergenic 35.0%
!!! ACAAGTGGAAATGGTTTTGT+TGG + chr3_1:15978330-15978349 Msa0350690:intron 35.0%
! ATTGTAGGGGTGTGTATATA+TGG - chr3_1:15978369-15978388 None:intergenic 35.0%
TAGTTACTTGTCAGCCAAAA+TGG + chr3_1:15978512-15978531 Msa0350690:intron 35.0%
CAAAGTAACAACGTGTTCAA+GGG - chr3_1:15978546-15978565 None:intergenic 35.0%
GCTCAATCTTTCACTACAAA+TGG + chr3_1:15978846-15978865 Msa0350690:intron 35.0%
! CATGGTAAAAAAAGTGCAAG+TGG - chr3_1:15978935-15978954 None:intergenic 35.0%
! ACTAATTCACCAAGTGGATT+TGG + chr3_1:15979005-15979024 Msa0350690:CDS 35.0%
AATGTTGTTCCAAATCCACT+TGG - chr3_1:15979017-15979036 None:intergenic 35.0%
! TGAGGCTCGATAATGAATTT+TGG + chr3_1:15979597-15979616 Msa0350690:intron 35.0%
ATTTATTCAAGATCCGCCAT+TGG - chr3_1:15979647-15979666 None:intergenic 35.0%
! TGAATTTCCATTGGTTACAG+TGG - chr3_1:15980151-15980170 None:intergenic 35.0%
! CATTGACAAAGTGTCACTAA+AGG - chr3_1:15980404-15980423 None:intergenic 35.0%
!! ACCTACCTCCTAATTTGTTA+CGG + chr3_1:15980520-15980539 Msa0350690:intron 35.0%
ATGTTCCGTAACAAATTAGG+AGG - chr3_1:15980528-15980547 None:intergenic 35.0%
AAACTTAATGCCCACTTCAA+AGG + chr3_1:15980554-15980573 Msa0350690:intron 35.0%
ATTTGTGGAAATGAGTGTGA+GGG - chr3_1:15981650-15981669 None:intergenic 35.0%
TTGTGAGAAAACTCCATTTG+TGG - chr3_1:15981665-15981684 None:intergenic 35.0%
! TTCTGAGGGTAATATGATGT+TGG - chr3_1:15981692-15981711 None:intergenic 35.0%
! CAATGATTTGTACTATGGTG+GGG - chr3_1:15981780-15981799 None:intergenic 35.0%
! GTCAATGATTTGTACTATGG+TGG - chr3_1:15981782-15981801 None:intergenic 35.0%
ACACCCAAAAATGTACCTAA+TGG + chr3_1:15981802-15981821 Msa0350690:CDS 35.0%
CTTTCTTCACTTCAAGATCT+TGG + chr3_1:15981916-15981935 Msa0350690:CDS 35.0%
! TGGAAGTAGTCTTAGTATGT+TGG + chr3_1:15981984-15982003 Msa0350690:CDS 35.0%
! GGAAGTAGTCTTAGTATGTT+GGG + chr3_1:15981985-15982004 Msa0350690:CDS 35.0%
!!! GGTGTTTTTAGATTTGCTAG+AGG + chr3_1:15982060-15982079 Msa0350690:CDS 35.0%
AAAATGTTCAGGGGTAGAAA+TGG - chr3_1:15982112-15982131 None:intergenic 35.0%
CTCAACAACAAAATGTTCAG+GGG - chr3_1:15979318-15979337 None:intergenic 35.0%
TTGAGTGGAAATGAGTGTGA+GGG - chr3_1:15971994-15972013 None:intergenic 40.0%
!! CTCTATAGTTTGTTGTTCGG+AGG - chr3_1:15972066-15972085 None:intergenic 40.0%
ACACCCCAAAATGTAGCTAA+TGG + chr3_1:15972161-15972180 Msa0350690:CDS 40.0%
ATGGATGATGCAATGACTGA+AGG + chr3_1:15972203-15972222 Msa0350690:intron 40.0%
AAACACATTGGAAGAGCTCA+AGG + chr3_1:15972242-15972261 Msa0350690:CDS 40.0%
AACACATTGGAAGAGCTCAA+GGG + chr3_1:15972243-15972262 Msa0350690:CDS 40.0%
!! TGGAAGCACTCTTAGTATGT+TGG + chr3_1:15972343-15972362 Msa0350690:CDS 40.0%
!! GGAAGCACTCTTAGTATGTT+GGG + chr3_1:15972344-15972363 Msa0350690:CDS 40.0%
AGAGAAACCTCAATTGTTGG+TGG + chr3_1:15972392-15972411 Msa0350690:CDS 40.0%
AAGGTGGAATCTCAAACTTG+AGG + chr3_1:15972791-15972810 Msa0350690:intron 40.0%
CAAAAGTTCCAAATCACGAC+TGG + chr3_1:15972887-15972906 Msa0350690:intron 40.0%
! CGACGAGGAAATTTTATGTG+GGG - chr3_1:15973564-15973583 None:intergenic 40.0%
! GCGACGAGGAAATTTTATGT+GGG - chr3_1:15973565-15973584 None:intergenic 40.0%
! TGCGACGAGGAAATTTTATG+TGG - chr3_1:15973566-15973585 None:intergenic 40.0%
! GTACACTAAATTTTGCGACG+AGG - chr3_1:15973579-15973598 None:intergenic 40.0%
TTGTATCTCTATCGCTCTCA+AGG - chr3_1:15973700-15973719 None:intergenic 40.0%
!! ATACTTCAACAAGCATTGGG+AGG + chr3_1:15973943-15973962 Msa0350690:intron 40.0%
TGTTGCACAACCAATAGTGA+GGG - chr3_1:15974014-15974033 None:intergenic 40.0%
ATGTAATATGACTACGGCCA+TGG - chr3_1:15974121-15974140 None:intergenic 40.0%
ACTCCCGTGGACAATTTATT+CGG + chr3_1:15974162-15974181 Msa0350690:intron 40.0%
TTATTCGGGCTCAAACGAAA+TGG + chr3_1:15974177-15974196 Msa0350690:intron 40.0%
GATGTCATTCACTTTGCTGA+GGG + chr3_1:15974248-15974267 Msa0350690:intron 40.0%
ATGTCATTCACTTTGCTGAG+GGG + chr3_1:15974249-15974268 Msa0350690:intron 40.0%
AGTGCAAACTCTATCGTCTT+CGG + chr3_1:15974316-15974335 Msa0350690:intron 40.0%
AACAAACTTCACCACGAAGT+TGG - chr3_1:15974405-15974424 None:intergenic 40.0%
TGTTAGTAGACAAGCGAACA+TGG + chr3_1:15974421-15974440 Msa0350690:intron 40.0%
TGGTTGCTCATACTTTAGCT+AGG + chr3_1:15974441-15974460 Msa0350690:intron 40.0%
GGTTGCTCATACTTTAGCTA+GGG + chr3_1:15974442-15974461 Msa0350690:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr3_1:15974714-15974733 Msa0350690:intron 40.0%
ATTGAAGCGCATTTCCGTAA+TGG + chr3_1:15974758-15974777 Msa0350690:intron 40.0%
!! TTGGTGACTTTTTCCCTTCT+AGG + chr3_1:15975360-15975379 Msa0350690:intron 40.0%
AAACACACAGAGACCTAGAA+GGG - chr3_1:15975376-15975395 None:intergenic 40.0%
!! TGCAGATCGTTGTTTTGTGT+TGG + chr3_1:15975406-15975425 Msa0350690:intron 40.0%
!!! TGCCTTCGTTTTGGTTTGTT+CGG + chr3_1:15975504-15975523 Msa0350690:intron 40.0%
!!! GTTTTGGTTTGTTCGGGTTT+TGG + chr3_1:15975511-15975530 Msa0350690:intron 40.0%
! TCCTGTTTCTTGTACAACAC+AGG + chr3_1:15975551-15975570 Msa0350690:intron 40.0%
ACCTGTGTTGTACAAGAAAC+AGG - chr3_1:15975555-15975574 None:intergenic 40.0%
GTTTCTTGTACAACACAGGT+TGG + chr3_1:15975555-15975574 Msa0350690:intron 40.0%
TTCTTGTACAACACAGGTTG+GGG + chr3_1:15975557-15975576 Msa0350690:intron 40.0%
ATCATAAACCCGAAAGGGTT+TGG + chr3_1:15975616-15975635 Msa0350690:intron 40.0%
TAAACGAACCAAACCCTTTC+GGG - chr3_1:15975627-15975646 None:intergenic 40.0%
! TAATCGAACCAGACCCTTTT+GGG - chr3_1:15975651-15975670 None:intergenic 40.0%
! TTAATCGAACCAGACCCTTT+TGG - chr3_1:15975652-15975671 None:intergenic 40.0%
TTATGCCAGCTGTTGTTACA+AGG + chr3_1:15975752-15975771 Msa0350690:intron 40.0%
ACTTTAACGGTTACATGCAG+AGG + chr3_1:15975833-15975852 Msa0350690:intron 40.0%
CTGCAAAACGAGAACATACT+TGG + chr3_1:15976170-15976189 Msa0350690:intron 40.0%
GGAGTGACTAACTCATTCTA+CGG + chr3_1:15976289-15976308 Msa0350690:intron 40.0%
GCAATCTACTGGAAGTTGAA+GGG + chr3_1:15976332-15976351 Msa0350690:intron 40.0%
! AGAGGAGTTGAATTGACTCA+GGG + chr3_1:15976489-15976508 Msa0350690:intron 40.0%
ATGATCTGCGAAAGACAAAG+AGG + chr3_1:15976553-15976572 Msa0350690:intron 40.0%
AGATGGATAATACGTTGCGT+TGG + chr3_1:15976669-15976688 Msa0350690:intron 40.0%
GATGGATAATACGTTGCGTT+GGG + chr3_1:15976670-15976689 Msa0350690:intron 40.0%
ACGATCAAACAGCACAAAAG+TGG - chr3_1:15977024-15977043 None:intergenic 40.0%
TAGGAATTACACCGTCAACA+AGG + chr3_1:15977120-15977139 Msa0350690:intron 40.0%
ACCGATGACTAATAATGACG+TGG + chr3_1:15977328-15977347 Msa0350690:intron 40.0%
GATGACTAATAATGACGTGG+TGG + chr3_1:15977331-15977350 Msa0350690:intron 40.0%
AACACTCCAACTAGCAAAAG+CGG + chr3_1:15977474-15977493 Msa0350690:intron 40.0%
! GATGTTGTTGCTGTTGAAGT+TGG + chr3_1:15977531-15977550 Msa0350690:intron 40.0%
TTCACGCGAACCAACTTATA+TGG - chr3_1:15977576-15977595 None:intergenic 40.0%
!! CCGTATTTCTTTTAAGTGCG+TGG + chr3_1:15978134-15978153 Msa0350690:intron 40.0%
GCAAAGTAACAACGTGTTCA+AGG - chr3_1:15978547-15978566 None:intergenic 40.0%
!! GAACACGTTGTTACTTTGCT+AGG + chr3_1:15978548-15978567 Msa0350690:intron 40.0%
GGTAGCCATTTGAAGATAAG+TGG - chr3_1:15978778-15978797 None:intergenic 40.0%
TTCAAATGGCTACCTCTCTT+AGG + chr3_1:15978784-15978803 Msa0350690:intron 40.0%
GAGAAAGAAGAACCTAAGAG+AGG - chr3_1:15978799-15978818 None:intergenic 40.0%
! CCACTTGGTGAATTAGTTGA+TGG - chr3_1:15979002-15979021 None:intergenic 40.0%
CCATCAACTAATTCACCAAG+TGG + chr3_1:15978999-15979018 Msa0350690:CDS 40.0%
! TTCACTGAAGGTGATTTTGC+TGG + chr3_1:15979161-15979180 Msa0350690:intron 40.0%
GGTAGTACTCTTAGTATGCT+TGG + chr3_1:15979182-15979201 Msa0350690:CDS 40.0%
TCTCTAACAGTGTCTTGAAC+AGG - chr3_1:15979215-15979234 None:intergenic 40.0%
GTTAGAGAACTGCCTATTGT+TGG + chr3_1:15979227-15979246 Msa0350690:CDS 40.0%
ATGCTACTGCTAAGAGTCTT+TGG + chr3_1:15979282-15979301 Msa0350690:CDS 40.0%
TGCTACTGCTAAGAGTCTTT+GGG + chr3_1:15979283-15979302 Msa0350690:CDS 40.0%
!!! TGGTTGGTCTCTTTTGATTG+TGG + chr3_1:15979744-15979763 Msa0350690:intron 40.0%
!! TCTCTTTTGATTGTGGCTGT+GGG + chr3_1:15979751-15979770 Msa0350690:intron 40.0%
! TTCCATTGGTTACAGTGGAA+GGG - chr3_1:15980146-15980165 None:intergenic 40.0%
! TTTCCATTGGTTACAGTGGA+AGG - chr3_1:15980147-15980166 None:intergenic 40.0%
GCTACATGATGCAGATTTGA+TGG - chr3_1:15980353-15980372 None:intergenic 40.0%
! CAAAGTGTCACTAAAGGAGT+CGG - chr3_1:15980398-15980417 None:intergenic 40.0%
TCCGTAACAAATTAGGAGGT+AGG - chr3_1:15980524-15980543 None:intergenic 40.0%
! CGAGTTTAGCTCAATTGGTA+GGG + chr3_1:15980622-15980641 Msa0350690:intron 40.0%
TACATAATATATGCAGGGGC+TGG + chr3_1:15980649-15980668 Msa0350690:intron 40.0%
ATGTGTGAGCTACAATCACT+AGG + chr3_1:15980710-15980729 Msa0350690:intron 40.0%
! AACACACCAAGCTTTGATGT+AGG + chr3_1:15980751-15980770 Msa0350690:intron 40.0%
! ACGTGTTTAGAGTAGAACCT+AGG - chr3_1:15981373-15981392 None:intergenic 40.0%
ATTTCACTTCTTTGCACACG+AGG - chr3_1:15981411-15981430 None:intergenic 40.0%
CATTTGTGGAAATGAGTGTG+AGG - chr3_1:15981651-15981670 None:intergenic 40.0%
CTCACACTCATTTCCACAAA+TGG + chr3_1:15981649-15981668 Msa0350690:CDS 40.0%
! TGTGTTAGTTTCTCTGTTCG+TGG - chr3_1:15981718-15981737 None:intergenic 40.0%
ATGGATGATGCAATGACTGA+AGG + chr3_1:15972203-15972222 Msa0350690:intron 40.0%
TGGATGATGCAATGACTGAA+GGG + chr3_1:15972204-15972223 Msa0350690:intron 40.0%
AACCATATTGGAAGAGCTCA+AGG + chr3_1:15981883-15981902 Msa0350690:CDS 40.0%
ACCATATTGGAAGAGCTCAA+GGG + chr3_1:15981884-15981903 Msa0350690:CDS 40.0%
TTTAAGGAGGGGGAATATAG+TGG + chr3_1:15981964-15981983 Msa0350690:CDS 40.0%
! GTAGTCTTAGTATGTTGGGA+AGG + chr3_1:15981989-15982008 Msa0350690:CDS 40.0%
AGAGAAATGCCTATTGTTGG+TGG + chr3_1:15982033-15982052 Msa0350690:CDS 40.0%
GTTGAGTGGAAATGAGTGTG+AGG - chr3_1:15971995-15972014 None:intergenic 45.0%
GCACTCTTAGTATGTTGGGA+AGG + chr3_1:15972348-15972367 Msa0350690:CDS 45.0%
! ACCTCAATTGTTGGTGGAAC+TGG + chr3_1:15972398-15972417 Msa0350690:CDS 45.0%
ACCAGTTCCACCAACAATTG+AGG - chr3_1:15972402-15972421 None:intergenic 45.0%
AGATGCATGACAGCAATGAC+AGG + chr3_1:15973974-15973993 Msa0350690:intron 45.0%
GTGTTGCACAACCAATAGTG+AGG - chr3_1:15974015-15974034 None:intergenic 45.0%
! CACTATTGGTTGTGCAACAC+AGG + chr3_1:15974015-15974034 Msa0350690:intron 45.0%
CACAGGCAAAATAGAGTGCA+AGG + chr3_1:15974032-15974051 Msa0350690:intron 45.0%
GACATGGTTGAAGTGCAATG+TGG + chr3_1:15974085-15974104 Msa0350690:intron 45.0%
CTCCCGTGGACAATTTATTC+GGG + chr3_1:15974163-15974182 Msa0350690:intron 45.0%
AGCCCGAATAAATTGTCCAC+GGG - chr3_1:15974168-15974187 None:intergenic 45.0%
GAGCCCGAATAAATTGTCCA+CGG - chr3_1:15974169-15974188 None:intergenic 45.0%
CGATGTCATTCACTTTGCTG+AGG + chr3_1:15974247-15974266 Msa0350690:intron 45.0%
GTGCAAACTCTATCGTCTTC+GGG + chr3_1:15974317-15974336 Msa0350690:intron 45.0%
TGCTCATACTTTAGCTAGGG+CGG + chr3_1:15974445-15974464 Msa0350690:intron 45.0%
!! CCAGAGGGAGTATTCTGTAA+AGG - chr3_1:15974624-15974643 None:intergenic 45.0%
CCTTTACAGAATACTCCCTC+TGG + chr3_1:15974621-15974640 Msa0350690:intron 45.0%
CAAACACACAGAGACCTAGA+AGG - chr3_1:15975377-15975396 None:intergenic 45.0%
!!! CGTTGTTTTGTGTTGGTTCC+TGG + chr3_1:15975413-15975432 Msa0350690:intron 45.0%
!!! TGTTTTGTGTTGGTTCCTGG+TGG + chr3_1:15975416-15975435 Msa0350690:intron 45.0%
! TTTCGTAGCTGCCTTCGTTT+TGG + chr3_1:15975495-15975514 Msa0350690:intron 45.0%
!!! GCCTTCGTTTTGGTTTGTTC+GGG + chr3_1:15975505-15975524 Msa0350690:intron 45.0%
ACCCGAACAAACCAAAACGA+AGG - chr3_1:15975509-15975528 None:intergenic 45.0%
!! TTGTTCGGGTTTTGGTAGCT+TGG + chr3_1:15975519-15975538 Msa0350690:intron 45.0%
TCGTTTAACCCAAAAGGGTC+TGG + chr3_1:15975640-15975659 Msa0350690:intron 45.0%
! TCTGGTTCGATTAACCCGAA+AGG + chr3_1:15975658-15975677 Msa0350690:intron 45.0%
! CTGGTTCGATTAACCCGAAA+GGG + chr3_1:15975659-15975678 Msa0350690:intron 45.0%
CGTGTGAAAACTCAGATCGA+GGG - chr3_1:15975711-15975730 None:intergenic 45.0%
ACGTGTGAAAACTCAGATCG+AGG - chr3_1:15975712-15975731 None:intergenic 45.0%
CTGTTGTTACAAGGAGCTGT+TGG + chr3_1:15975761-15975780 Msa0350690:intron 45.0%
!! TGGATTGGTTACCGTGTTGA+CGG + chr3_1:15975788-15975807 Msa0350690:intron 45.0%
!! GAATGGATTAGCCGTCAACA+CGG - chr3_1:15975802-15975821 None:intergenic 45.0%
!! ATTCCCGTTTGGGTTTTTCC+TGG + chr3_1:15975991-15976010 Msa0350690:intron 45.0%
!! TTCCCGTTTGGGTTTTTCCT+GGG + chr3_1:15975992-15976011 Msa0350690:intron 45.0%
TGACCCAGGAAAAACCCAAA+CGG - chr3_1:15975998-15976017 None:intergenic 45.0%
GGCAATCTACTGGAAGTTGA+AGG + chr3_1:15976331-15976350 Msa0350690:intron 45.0%
! CAGAGGAGTTGAATTGACTC+AGG + chr3_1:15976488-15976507 Msa0350690:intron 45.0%
!! TTACAGGAAGCTTTGGAGTC+TGG + chr3_1:15977421-15977440 Msa0350690:intron 45.0%
!! TTCACACCGCTTTTGCTAGT+TGG - chr3_1:15977483-15977502 None:intergenic 45.0%
TACTTGTCAGCCAAAATGGC+AGG + chr3_1:15978516-15978535 Msa0350690:intron 45.0%
GATGGACAACCTCTTAACTG+AGG + chr3_1:15979040-15979059 Msa0350690:CDS 45.0%
GCTCTTGTTCCTCAGTTAAG+AGG - chr3_1:15979052-15979071 None:intergenic 45.0%
GAGCTAACCTCAAAACCTGT+TGG + chr3_1:15979068-15979087 Msa0350690:CDS 45.0%
! AGCTCTACCAACAGGTTTTG+AGG - chr3_1:15979078-15979097 None:intergenic 45.0%
! AAACCTGTTGGTAGAGCTCA+AGG + chr3_1:15979080-15979099 Msa0350690:CDS 45.0%
! AACCTGTTGGTAGAGCTCAA+GGG + chr3_1:15979081-15979100 Msa0350690:CDS 45.0%
AGCTCAAGGGATGTTTGGTT+TGG + chr3_1:15979094-15979113 Msa0350690:CDS 45.0%
ATCTTTGCATGACCGTGGAA+TGG + chr3_1:15979118-15979137 Msa0350690:intron 45.0%
AGAGAACTGCCTATTGTTGG+TGG + chr3_1:15979230-15979249 Msa0350690:CDS 45.0%
!! GGAGTGTTTAGGTTTGCTAG+AGG + chr3_1:15979257-15979276 Msa0350690:CDS 45.0%
ATGAGCAACCAACAGTCTAG+TGG + chr3_1:15979724-15979743 Msa0350690:intron 45.0%
!! GTCTCTTTTGATTGTGGCTG+TGG + chr3_1:15979750-15979769 Msa0350690:intron 45.0%
ACTAAAAACTAGACGGAGGC+AGG + chr3_1:15980085-15980104 Msa0350690:intron 45.0%
ACTGATGCAGTGATAGACAG+GGG - chr3_1:15980253-15980272 None:intergenic 45.0%
GACTGATGCAGTGATAGACA+GGG - chr3_1:15980254-15980273 None:intergenic 45.0%
AGACTGATGCAGTGATAGAC+AGG - chr3_1:15980255-15980274 None:intergenic 45.0%
!! AGCTTGCAAGCCTTTGAAGT+GGG - chr3_1:15980567-15980586 None:intergenic 45.0%
! TAGCTTGCAAGCCTTTGAAG+TGG - chr3_1:15980568-15980587 None:intergenic 45.0%
AAACTCGCAAGGACAAAGCT+TGG - chr3_1:15980609-15980628 None:intergenic 45.0%
CCAATTGAGCTAAACTCGCA+AGG - chr3_1:15980620-15980639 None:intergenic 45.0%
! CCTTGCGAGTTTAGCTCAAT+TGG + chr3_1:15980617-15980636 Msa0350690:intron 45.0%
! GCGAGTTTAGCTCAATTGGT+AGG + chr3_1:15980621-15980640 Msa0350690:intron 45.0%
GAAGGACCTACATCAAAGCT+TGG - chr3_1:15980760-15980779 None:intergenic 45.0%
GATGTAGGTCCTTCACATGA+TGG + chr3_1:15980766-15980785 Msa0350690:intron 45.0%
! GATAAAGATTCTAGGAGCGG+TGG - chr3_1:15980814-15980833 None:intergenic 45.0%
AAATGAGTGTGAGGGAGAAG+AGG - chr3_1:15971986-15972005 None:intergenic 45.0%
TCTGTTCGTGGTTGTTCTGA+GGG - chr3_1:15981706-15981725 None:intergenic 45.0%
ACCCTTGAGCTCTTCCAATA+TGG - chr3_1:15981888-15981907 None:intergenic 45.0%
! ATGCCTATTGTTGGTGGAAC+TGG + chr3_1:15982039-15982058 Msa0350690:CDS 45.0%
ACACCAGTTCCACCAACAAT+AGG - chr3_1:15982045-15982064 None:intergenic 45.0%
!!! TAAATAATATTTTTTATTAC+AGG + chr3_1:15977405-15977424 Msa0350690:intron 5.0%
!!! ATTTTTTTATTAAATATTTG+AGG + chr3_1:15979579-15979598 Msa0350690:intron 5.0%
GGAAGAGCTCAAGGGATGTT+TGG + chr3_1:15972251-15972270 Msa0350690:CDS 50.0%
AGTTCCAAATCACGACTGGC+TGG + chr3_1:15972891-15972910 Msa0350690:intron 50.0%
! GTTCCAAATCACGACTGGCT+GGG + chr3_1:15972892-15972911 Msa0350690:intron 50.0%
TATCCCAGCCAGTCGTGATT+TGG - chr3_1:15972898-15972917 None:intergenic 50.0%
AAGCAAAAGCCTCGTCTCCT+TGG - chr3_1:15973381-15973400 None:intergenic 50.0%
TGCATGACAGCAATGACAGG+AGG + chr3_1:15973977-15973996 Msa0350690:intron 50.0%
TGTTGTGTTAGAGACTCCCG+TGG + chr3_1:15974149-15974168 Msa0350690:intron 50.0%
GGCTCAAACGAAATGGCAGA+GGG + chr3_1:15974184-15974203 Msa0350690:intron 50.0%
!!! TATGTCAGTTTTGGAGGGGG+AGG + chr3_1:15974211-15974230 Msa0350690:intron 50.0%
ACTTTGCTGAGGGGAACAGA+TGG + chr3_1:15974258-15974277 Msa0350690:intron 50.0%
CTTTGCTGAGGGGAACAGAT+GGG + chr3_1:15974259-15974278 Msa0350690:intron 50.0%
! AGTCCGACTCGAAGACAACT+CGG - chr3_1:15974286-15974305 None:intergenic 50.0%
ACTCTATCGTCTTCGGGTCA+TGG + chr3_1:15974323-15974342 Msa0350690:intron 50.0%
TCTCGTGGTGGTTGCTTGTT+TGG + chr3_1:15975439-15975458 Msa0350690:intron 50.0%
CTCGTGGTGGTTGCTTGTTT+GGG + chr3_1:15975440-15975459 Msa0350690:intron 50.0%
TGGTGGTTGCTTGTTTGGGT+TGG + chr3_1:15975444-15975463 Msa0350690:intron 50.0%
! GGTGGTTGCTTGTTTGGGTT+GGG + chr3_1:15975445-15975464 Msa0350690:intron 50.0%
!! TGCTTGTTTGGGTTGGGTCA+AGG + chr3_1:15975451-15975470 Msa0350690:intron 50.0%
!! TGTTTGGGTTGGGTCAAGGT+TGG + chr3_1:15975455-15975474 Msa0350690:intron 50.0%
! TTGTACAACACAGGTTGGGG+TGG + chr3_1:15975560-15975579 Msa0350690:intron 50.0%
!! AGAGCTGGGCTATTTTGCAG+TGG + chr3_1:15975587-15975606 Msa0350690:intron 50.0%
TCGATTAACCCGAAAGGGTC+TGG + chr3_1:15975664-15975683 Msa0350690:intron 50.0%
CAGCTCCTTGTAACAACAGC+TGG - chr3_1:15975760-15975779 None:intergenic 50.0%
TACAAGGAGCTGTTGGCACT+TGG + chr3_1:15975768-15975787 Msa0350690:intron 50.0%
GACCCAGGAAAAACCCAAAC+GGG - chr3_1:15975997-15976016 None:intergenic 50.0%
!! GTTTGGGTTTTTCCTGGGTC+AGG + chr3_1:15975997-15976016 Msa0350690:intron 50.0%
GTGCACTCAATGTGCATCGT+TGG + chr3_1:15976812-15976831 Msa0350690:intron 50.0%
AGCTCTCTTCGTTGCACTTC+TGG - chr3_1:15977280-15977299 None:intergenic 50.0%
CTAGCAAAAGCGGTGTGAAG+CGG + chr3_1:15977484-15977503 Msa0350690:intron 50.0%
CTTAAGTCAGTAGACCCGTG+CGG + chr3_1:15978255-15978274 Msa0350690:intron 50.0%
!! CAAGGGTTGACCTGCCATTT+TGG - chr3_1:15978529-15978548 None:intergenic 50.0%
ATCCCTTGAGCTCTACCAAC+AGG - chr3_1:15979086-15979105 None:intergenic 50.0%
GGTAGAGCTCAAGGGATGTT+TGG + chr3_1:15979089-15979108 Msa0350690:CDS 50.0%
TTGGCATCTTTGCATGACCG+TGG + chr3_1:15979113-15979132 Msa0350690:intron 50.0%
!! ACTGCCTATTGTTGGTGGCA+CGG + chr3_1:15979235-15979254 Msa0350690:CDS 50.0%
GCAACCAACAGTCTAGTGGT+TGG + chr3_1:15979728-15979747 Msa0350690:intron 50.0%
GAGACCAACCACTAGACTGT+TGG - chr3_1:15979735-15979754 None:intergenic 50.0%
CACCCTTCCACTGTAACCAA+TGG + chr3_1:15980141-15980160 Msa0350690:intron 50.0%
! GTGGACAAGTTGGGTGTTAG+AGG - chr3_1:15980683-15980702 None:intergenic 50.0%
CTCTGTTCGTGGTTGTTCTG+AGG - chr3_1:15981707-15981726 None:intergenic 50.0%
GGAAGAGCTCAAGGGTTGTT+TGG + chr3_1:15981892-15981911 Msa0350690:CDS 50.0%
AAAGCCTCGTCTCCTTGGCA+GGG - chr3_1:15973376-15973395 None:intergenic 55.0%
AAAAGCCTCGTCTCCTTGGC+AGG - chr3_1:15973377-15973396 None:intergenic 55.0%
CACTTCAACCATGTCTCGCG+CGG - chr3_1:15974080-15974099 None:intergenic 55.0%
AATGTGGATGCCGCGTTCCA+TGG + chr3_1:15974101-15974120 Msa0350690:intron 55.0%
ATGACTACGGCCATGGAACG+CGG - chr3_1:15974114-15974133 None:intergenic 55.0%
GGGCTCAAACGAAATGGCAG+AGG + chr3_1:15974183-15974202 Msa0350690:intron 55.0%
GGACCGAGTTGTCTTCGAGT+CGG + chr3_1:15974280-15974299 Msa0350690:intron 55.0%
! ACGGTGACTAGCCCAAGAAC+AGG - chr3_1:15974471-15974490 None:intergenic 55.0%
!! GGGTCAAGGTTGGTGTTCAC+AGG + chr3_1:15975465-15975484 Msa0350690:intron 55.0%
!! AGGTTGGTGTTCACAGGTGC+TGG + chr3_1:15975471-15975490 Msa0350690:intron 55.0%
GTCAGCAACCAGACCCTTTC+GGG - chr3_1:15975675-15975694 None:intergenic 55.0%
CGTCAGCAACCAGACCCTTT+CGG - chr3_1:15975676-15975695 None:intergenic 55.0%
GGAGCTGTTGGCACTTGGAT+TGG + chr3_1:15975773-15975792 Msa0350690:intron 55.0%
! GGGTTTTTCCTGGGTCAGGT+CGG + chr3_1:15976001-15976020 Msa0350690:intron 55.0%
!! CTGCCTATTGTTGGTGGCAC+GGG + chr3_1:15979236-15979255 Msa0350690:CDS 55.0%
ACTCCCGTGCCACCAACAAT+AGG - chr3_1:15979242-15979261 None:intergenic 55.0%
!! TTGGTGGCACGGGAGTGTTT+AGG + chr3_1:15979246-15979265 Msa0350690:CDS 55.0%
TTGATTGTGGCTGTGGGAGC+TGG + chr3_1:15979757-15979776 Msa0350690:intron 55.0%
!! GAGCTGGTTTGATTCCCCAC+AGG + chr3_1:15979773-15979792 Msa0350690:intron 55.0%
AGCAATGTTGGGGGTTGCCA+TGG + chr3_1:15980201-15980220 Msa0350690:intron 55.0%
GGATCTCTGTTGAGACTCCC+AGG - chr3_1:15980229-15980248 None:intergenic 55.0%
GATGCAGTGATAGACAGGGG+CGG - chr3_1:15980250-15980269 None:intergenic 55.0%
!! CTTCGCGAGGAGCGTTCAAA+GGG - chr3_1:15981464-15981483 None:intergenic 55.0%
!! ACTTCGCGAGGAGCGTTCAA+AGG - chr3_1:15981465-15981484 None:intergenic 55.0%
TATTGCCCACGTACTTCGCG+AGG - chr3_1:15981477-15981496 None:intergenic 55.0%
CGAACTGACACACCCTGCCA+AGG + chr3_1:15973361-15973380 Msa0350690:intron 60.0%
TAGCTAGGGCGGCCTGTTCT+TGG + chr3_1:15974456-15974475 Msa0350690:intron 60.0%
AGCTAGGGCGGCCTGTTCTT+GGG + chr3_1:15974457-15974476 Msa0350690:intron 60.0%
! GTTGGTTCCTGGTGGTCTCG+TGG + chr3_1:15975424-15975443 Msa0350690:intron 60.0%
GTTGGGGTGGTAGCAGAGCT+GGG + chr3_1:15975573-15975592 Msa0350690:intron 60.0%
ATCCACGATCTTCGCGAGCG+AGG - chr3_1:15978636-15978655 None:intergenic 60.0%
GTTGAGACTCCCAGGTGCCA+TGG - chr3_1:15980221-15980240 None:intergenic 60.0%
AACGCTCCTCGCGAAGTACG+TGG + chr3_1:15981468-15981487 Msa0350690:intron 60.0%
ACGCTCCTCGCGAAGTACGT+GGG + chr3_1:15981469-15981488 Msa0350690:intron 60.0%
CACACCCTGCCAAGGAGACG+AGG + chr3_1:15973369-15973388 Msa0350690:intron 65.0%
GCGAGAAACCGCGCGAGACA+TGG + chr3_1:15974069-15974088 Msa0350690:intron 65.0%
GGTTCCTGGTGGTCTCGTGG+TGG + chr3_1:15975427-15975446 Msa0350690:intron 65.0%
GCAACCACCACGAGACCACC+AGG - chr3_1:15975434-15975453 None:intergenic 65.0%
GGTTGGGGTGGTAGCAGAGC+TGG + chr3_1:15975572-15975591 Msa0350690:intron 65.0%
! TCTGGTTTCGCGCCCGTACG+CGG + chr3_1:15975881-15975900 Msa0350690:intron 65.0%
AACCCAGCGAACCCGCGTAC+GGG - chr3_1:15975896-15975915 None:intergenic 65.0%
CAACCCAGCGAACCCGCGTA+CGG - chr3_1:15975897-15975916 None:intergenic 65.0%
TGCCTCGCTCGCGAAGATCG+TGG + chr3_1:15978631-15978650 Msa0350690:intron 65.0%
TTGGGGGTTGCCATGGCACC+TGG + chr3_1:15980208-15980227 Msa0350690:intron 65.0%
TGGGGGTTGCCATGGCACCT+GGG + chr3_1:15980209-15980228 Msa0350690:intron 65.0%
CTGGTTTCGCGCCCGTACGC+GGG + chr3_1:15975882-15975901 Msa0350690:intron 70.0%
GTAGACCCGTGCGGAGCGCA+CGG + chr3_1:15978264-15978283 Msa0350690:intron 70.0%
TAGACCCGTGCGGAGCGCAC+GGG + chr3_1:15978265-15978284 Msa0350690:intron 70.0%
ATCACCCGTGCGCTCCGCAC+GGG - chr3_1:15978272-15978291 None:intergenic 70.0%
CATCACCCGTGCGCTCCGCA+CGG - chr3_1:15978273-15978292 None:intergenic 70.0%
CGCCCGTACGCGGGTTCGCT+GGG + chr3_1:15975891-15975910 Msa0350690:intron 75.0%
!! GGGGGCATCCGACCTGACCC+AGG - chr3_1:15976012-15976031 None:intergenic 75.0%
CGTGCGGAGCGCACGGGTGA+TGG + chr3_1:15978271-15978290 Msa0350690:intron 75.0%
! GCGCCCGTACGCGGGTTCGC+TGG + chr3_1:15975890-15975909 Msa0350690:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 15971957 15982167 15971957 ID=Msa0350690;Name=Msa0350690
chr3_1 mRNA 15971957 15982167 15971957 ID=Msa0350690-mRNA-1;Parent=Msa0350690;Name=Msa0350690-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|0|0|5|0|462
chr3_1 exon 15971957 15972188 15971957 ID=Msa0350690-mRNA-1:exon:3882;Parent=Msa0350690-mRNA-1
chr3_1 exon 15972225 15972458 15972225 ID=Msa0350690-mRNA-1:exon:3883;Parent=Msa0350690-mRNA-1
chr3_1 exon 15978967 15979131 15978967 ID=Msa0350690-mRNA-1:exon:3884;Parent=Msa0350690-mRNA-1
chr3_1 exon 15979171 15979349 15979171 ID=Msa0350690-mRNA-1:exon:3885;Parent=Msa0350690-mRNA-1
chr3_1 exon 15981589 15982167 15981589 ID=Msa0350690-mRNA-1:exon:3886;Parent=Msa0350690-mRNA-1
chr3_1 CDS 15971957 15972188 15971957 ID=Msa0350690-mRNA-1:cds;Parent=Msa0350690-mRNA-1
chr3_1 CDS 15972225 15972458 15972225 ID=Msa0350690-mRNA-1:cds;Parent=Msa0350690-mRNA-1
chr3_1 CDS 15978967 15979131 15978967 ID=Msa0350690-mRNA-1:cds;Parent=Msa0350690-mRNA-1
chr3_1 CDS 15979171 15979349 15979171 ID=Msa0350690-mRNA-1:cds;Parent=Msa0350690-mRNA-1
chr3_1 CDS 15981589 15982167 15981589 ID=Msa0350690-mRNA-1:cds;Parent=Msa0350690-mRNA-1
Gene Sequence

>Msa0350690

ATGACTCTTTCACATAGTTTCATCTTTCTCTTCTCCCTCACACTCATTTCCACTCAACTAACATCCACAAATGGAGATTTCTCAAAACAATCAAACATCATATTACCCTCCGAACAACAAACTATAGAGAAGCTAACACATATCCATTTTTACTACCATGACATTAGAGGCAACAAAAACCCCACCATGTTACAAATCATTGACACACCCCAAAATGTAGCTAATGGATTTGGACCAGAATTAAGTTCAAAACACATTGGAAGAGCTCAAGGGATGTTTGGTCTTTGTTCACTTCATGATATTGCAGAGTGTATGATGATAAATATGGTTTTTAATGAAGGGAAATATGCTGGAAGCACTCTTAGTATGTTGGGAAGGAATCCTATTACCAAACAAAATAGAGAAACCTCAATTGTTGGTGGAACTGGTATTTTCAGATTTGCTAGAGGGTTTGCTATTGCAAATAGTAAAAATCCAACGGTTGTACAAATTATAGATCCATCAACTAATTCACCAAGTGGATTTGGAACAACATTCATGATGGACAACCTCTTAACTGAGGAACAAGAGCTAACCTCAAAACCTGTTGGTAGAGCTCAAGGGATGTTTGGTTTGGCATCTTTGCATGACCGTGATTTTGCTGGTAGTACTCTTAGTATGCTTGGAAGAAATCCTGTTCAAGACACTGTTAGAGAACTGCCTATTGTTGGTGGCACGGGAGTGTTTAGGTTTGCTAGAGGATATGCTACTGCTAAGAGTCTTTGGGAGATTTCAACTTCTGAACATTTTGTTGTTGAGTATGATGTCACTGAAGAAAAAATATTCTTACAAACAATGGCACTTTCACATAGTTTCTTTTTCCTCTTCTCCCTCACACTCATTTCCACAAATGGAGTTTTCTCACAACAATCCAACATCATATTACCCTCAGAACAACCACGAACAGAGAAACTAACACATATCCATTTCTACTACCATGACATTAGAGACAACAAAAGCCCCACCATAGTACAAATCATTGACACACCCAAAAATGTACCTAATGGATTTGGTTCAACTTTTATGATGGATGATGCAATGACTGAAGGGCCAGAGTTAAGTTCAAACCATATTGGAAGAGCTCAAGGGTTGTTTGGTCTTTCTTCACTTCAAGATCTTGGAATGTTTATGTTAACAAATTTTGTTTTTAAGGAGGGGGAATATAGTGGAAGTAGTCTTAGTATGTTGGGAAGGAATCCTATTTCTGAACAAAATAGAGAAATGCCTATTGTTGGTGGAACTGGTGTTTTTAGATTTGCTAGAGGGTATGCTATTGCAAATAGTGTTGATTCCATTTCTACCCCTGAACATTTTGTTGTTGAGTATAATATTACTGTTTCTCATCCCTAA
Protein sequence

>Msa0350690

MTLSHSFIFLFSLTLISTQLTSTNGDFSKQSNIILPSEQQTIEKLTHIHFYYHDIRGNKNPTMLQIIDTPQNVANGFGPELSSKHIGRAQGMFGLCSLHDIAECMMINMVFNEGKYAGSTLSMLGRNPITKQNRETSIVGGTGIFRFARGFAIANSKNPTVVQIIDPSTNSPSGFGTTFMMDNLLTEEQELTSKPVGRAQGMFGLASLHDRDFAGSTLSMLGRNPVQDTVRELPIVGGTGVFRFARGYATAKSLWEISTSEHFVVEYDVTEEKIFLQTMALSHSFFFLFSLTLISTNGVFSQQSNIILPSEQPRTEKLTHIHFYYHDIRDNKSPTIVQIIDTPKNVPNGFGSTFMMDDAMTEGPELSSNHIGRAQGLFGLSSLQDLGMFMLTNFVFKEGEYSGSSLSMLGRNPISEQNREMPIVGGTGVFRFARGYAIANSVDSISTPEHFVVEYNITVSHP*