AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1423320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1423320 MtrunA17_Chr7g0235551 99.016 508 5 0 1 508 1 508 0.0 1046
Msa1423320 MtrunA17_Chr7g0258221 47.115 520 260 6 1 514 1 511 2.67e-171 493
Msa1423320 MtrunA17_Chr1g0174471 46.693 514 256 8 1 506 16 519 1.47e-164 477
Msa1423320 MtrunA17_Chr3g0084921 45.631 515 269 5 1 508 1 511 6.53e-164 474
Msa1423320 MtrunA17_Chr1g0174451 44.639 513 272 6 1 508 1 506 9.28e-158 459
Msa1423320 MtrunA17_Chr1g0174481 43.969 514 274 8 1 511 1 503 9.34e-158 458
Msa1423320 MtrunA17_Chr1g0174461 44.922 512 271 6 1 508 1 505 1.61e-157 458
Msa1423320 MtrunA17_Chr8g0362701 45.825 515 268 6 1 511 1 508 1.49e-154 451
Msa1423320 MtrunA17_Chr8g0362481 48.430 446 220 5 69 511 1 439 2.61e-150 437
Msa1423320 MtrunA17_Chr1g0174441 42.553 517 285 6 1 511 20 530 4.34e-149 437
Msa1423320 MtrunA17_Chr4g0030701 44.239 486 256 6 35 508 36 518 1.00e-139 413
Msa1423320 MtrunA17_Chr7g0224551 42.105 513 272 6 9 508 9 509 1.96e-138 410
Msa1423320 MtrunA17_Chr7g0224561 42.188 512 258 7 18 505 9 506 2.48e-137 407
Msa1423320 MtrunA17_Chr4g0030711 42.977 477 256 6 45 508 48 521 2.11e-135 402
Msa1423320 MtrunA17_Chr8g0351801 40.956 481 271 5 44 512 44 523 4.38e-131 391
Msa1423320 MtrunA17_Chr1g0207841 40.909 484 260 6 45 511 49 523 1.74e-129 387
Msa1423320 MtrunA17_Chr8g0344151 41.279 516 283 10 1 510 6 507 1.02e-125 377
Msa1423320 MtrunA17_Chr8g0344181 41.942 484 263 9 31 508 36 507 7.72e-124 372
Msa1423320 MtrunA17_Chr3g0094171 38.569 503 296 8 9 508 16 508 1.44e-121 366
Msa1423320 MtrunA17_Chr7g0258211 41.151 469 261 6 43 505 48 507 2.07e-119 360
Msa1423320 MtrunA17_Chr8g0344191 38.672 512 295 10 4 508 40 539 1.03e-115 352
Msa1423320 MtrunA17_Chr3g0086661 39.535 473 273 5 43 508 41 507 7.29e-114 347
Msa1423320 MtrunA17_Chr3g0086651 38.901 473 276 5 43 508 41 507 3.55e-113 345
Msa1423320 MtrunA17_Chr5g0403351 36.581 503 291 12 3 491 4 492 8.54e-113 343
Msa1423320 MtrunA17_Chr4g0046351 38.683 486 274 8 34 505 35 510 1.05e-112 343
Msa1423320 MtrunA17_Chr4g0046321 38.889 486 273 8 34 505 35 510 4.44e-112 342
Msa1423320 MtrunA17_Chr3g0101631 38.833 497 274 12 2 489 3 478 1.26e-111 340
Msa1423320 MtrunA17_Chr3g0094231 36.140 487 296 9 24 508 27 500 2.62e-111 340
Msa1423320 MtrunA17_Chr4g0046331 38.115 488 276 8 34 505 35 512 6.96e-111 339
Msa1423320 MtrunA17_Chr3g0086691 36.364 473 288 5 43 508 41 507 4.62e-110 337
Msa1423320 MtrunA17_Chr1g0162811 38.289 491 278 11 7 488 7 481 4.65e-110 336
Msa1423320 MtrunA17_Chr5g0403321 38.819 474 264 11 27 488 28 487 7.68e-109 333
Msa1423320 MtrunA17_Chr3g0116741 36.965 514 297 12 3 507 21 516 8.23e-109 333
Msa1423320 MtrunA17_Chr5g0403331 37.827 497 283 13 7 494 12 491 8.40e-109 333
Msa1423320 MtrunA17_Chr3g0116681 37.425 497 281 13 4 489 8 485 2.37e-108 332
Msa1423320 MtrunA17_Chr4g0058281 35.913 504 307 8 10 508 23 515 2.42e-108 332
Msa1423320 MtrunA17_Chr4g0061381 37.053 475 280 7 43 508 40 504 6.48e-108 331
Msa1423320 MtrunA17_Chr6g0484841 38.710 465 262 8 32 488 36 485 2.89e-107 329
Msa1423320 MtrunA17_Chr3g0101691 36.183 503 301 11 10 505 14 503 5.87e-106 326
Msa1423320 MtrunA17_Chr4g0047631 36.686 507 300 9 8 511 28 516 1.58e-105 325
Msa1423320 MtrunA17_Chr3g0101611 38.013 463 266 10 32 488 37 484 4.94e-105 323
Msa1423320 MtrunA17_Chr6g0484811 35.968 506 305 10 9 508 14 506 1.17e-104 322
Msa1423320 MtrunA17_Chr3g0101711 35.913 504 304 10 10 507 14 504 1.25e-104 322
Msa1423320 MtrunA17_Chr4g0020041 37.728 493 286 10 8 494 12 489 1.44e-104 322
Msa1423320 MtrunA17_Chr3g0101581 34.990 503 311 9 8 507 13 502 2.06e-104 322
Msa1423320 MtrunA17_Chr4g0076161 35.516 504 305 12 10 507 14 503 9.06e-104 320
Msa1423320 MtrunA17_Chr3g0101661 36.275 510 302 12 10 511 14 508 1.43e-103 320
Msa1423320 MtrunA17_Chr5g0405001 36.346 509 287 12 9 505 28 511 1.86e-103 320
Msa1423320 MtrunA17_Chr4g0035921 34.100 522 312 12 4 509 8 513 3.68e-103 319
Msa1423320 MtrunA17_Chr8g0390881 35.236 508 309 8 9 508 10 505 4.49e-103 318
Msa1423320 MtrunA17_Chr3g0101601 37.702 496 278 12 7 494 12 484 5.34e-103 318
Msa1423320 MtrunA17_Chr3g0101731 36.032 494 297 10 6 494 9 488 5.86e-103 318
Msa1423320 MtrunA17_Chr4g0058231 36.364 506 290 11 12 500 1 491 9.62e-103 317
Msa1423320 MtrunA17_Chr5g0430031 35.220 477 285 9 8 474 8 470 2.54e-102 317
Msa1423320 MtrunA17_Chr1g0205361 35.785 503 306 7 8 506 7 496 5.49e-102 315
Msa1423320 MtrunA17_Chr5g0445441 35.685 496 293 12 4 494 54 528 8.44e-102 316
Msa1423320 MtrunA17_Chr4g0058261 36.743 479 284 9 35 505 64 531 9.01e-102 316
Msa1423320 MtrunA17_Chr3g0101571 36.147 462 274 9 32 488 35 480 9.54e-102 315
Msa1423320 MtrunA17_Chr6g0472311 35.577 520 307 12 7 508 9 518 1.32e-101 315
Msa1423320 MtrunA17_Chr3g0101701 37.214 481 283 10 33 507 38 505 3.37e-101 313
Msa1423320 MtrunA17_Chr5g0431641 32.677 508 315 10 7 504 12 502 4.09e-101 313
Msa1423320 MtrunA17_Chr5g0430081 35.714 504 301 10 9 504 11 499 5.05e-101 313
Msa1423320 MtrunA17_Chr6g0451751 36.157 484 287 7 40 508 47 523 5.97e-101 313
Msa1423320 MtrunA17_Chr6g0463791 36.864 491 286 12 10 494 14 486 7.20e-101 312
Msa1423320 MtrunA17_Chr2g0310391 33.201 503 323 6 8 508 3 494 8.72e-101 312
Msa1423320 MtrunA17_Chr5g0445451 34.545 495 298 11 9 494 10 487 9.46e-101 312
Msa1423320 MtrunA17_Chr2g0310381 35.356 478 296 6 33 508 28 494 1.71e-100 311
Msa1423320 MtrunA17_Chr4g0047661 35.375 506 304 11 15 510 28 520 1.74e-100 312
Msa1423320 MtrunA17_Chr5g0430131 34.646 508 309 9 4 504 9 500 5.29e-100 310
Msa1423320 MtrunA17_Chr8g0372251 37.045 494 283 11 23 505 27 503 2.30e-99 309
Msa1423320 MtrunA17_Chr4g0047691 36.441 472 283 8 32 500 51 508 7.88e-99 308
Msa1423320 MtrunA17_Chr5g0430101 34.122 507 304 9 12 504 8 498 1.30e-98 307
Msa1423320 MtrunA17_Chr3g0101651 35.343 481 292 10 33 507 38 505 1.81e-98 306
Msa1423320 MtrunA17_Chr3g0101621 36.382 492 286 11 2 488 3 472 2.69e-98 305
Msa1423320 MtrunA17_Chr4g0058191 35.729 473 288 8 38 507 29 488 4.50e-98 305
Msa1423320 MtrunA17_Chr3g0101721 36.117 479 286 10 22 494 26 490 1.66e-97 304
Msa1423320 MtrunA17_Chr1g0160851 35.010 477 295 6 31 505 32 495 1.78e-97 303
Msa1423320 MtrunA17_Chr4g0047641 33.789 512 320 9 7 510 19 519 2.14e-97 304
Msa1423320 MtrunA17_Chr8g0356001 35.294 476 295 7 32 505 40 504 2.41e-97 303
Msa1423320 MtrunA17_Chr3g0101801 34.483 522 305 14 8 509 11 515 2.85e-97 303
Msa1423320 MtrunA17_Chr7g0254641 35.758 495 300 11 23 508 30 515 3.04e-97 304
Msa1423320 MtrunA17_Chr3g0101811 34.725 527 303 14 6 506 9 520 7.60e-97 303
Msa1423320 MtrunA17_Chr8g0382901 34.879 496 307 7 15 508 474 955 7.71e-97 314
Msa1423320 MtrunA17_Chr8g0382901 35.269 465 268 9 27 488 22 456 5.32e-89 293
Msa1423320 MtrunA17_Chr5g0446161 36.875 480 280 10 32 507 40 500 7.72e-97 302
Msa1423320 MtrunA17_Chr6g0463801 35.700 493 285 13 11 489 5 479 7.77e-97 302
Msa1423320 MtrunA17_Chr3g0101751 35.438 491 293 12 7 488 14 489 2.42e-96 301
Msa1423320 MtrunA17_Chr5g0445531 34.542 469 279 11 33 491 38 488 3.36e-96 300
Msa1423320 MtrunA17_Chr6g0451781 35.802 486 286 8 40 508 80 556 5.17e-96 302
Msa1423320 MtrunA17_Chr3g0101761 36.032 494 288 12 8 488 4 482 1.13e-95 299
Msa1423320 MtrunA17_Chr8g0361471 33.608 485 300 11 2 479 3 472 5.91e-95 297
Msa1423320 MtrunA17_Chr1g0205371 34.553 492 303 8 19 505 19 496 8.93e-95 296
Msa1423320 MtrunA17_Chr6g0451691 36.105 493 279 9 40 508 47 527 1.06e-94 298
Msa1423320 MtrunA17_Chr5g0445461 33.669 496 301 11 9 494 10 487 2.27e-94 296
Msa1423320 MtrunA17_Chr1g0167321 37.323 493 285 13 10 494 11 487 2.28e-94 296
Msa1423320 MtrunA17_Chr5g0445381 33.725 510 308 12 10 506 38 530 2.33e-94 296
Msa1423320 MtrunA17_Chr4g0039901 34.038 473 298 6 32 502 34 494 3.65e-94 295
Msa1423320 MtrunA17_Chr5g0431671 32.712 483 297 11 33 504 38 503 3.66e-94 295
Msa1423320 MtrunA17_Chr5g0446151 35.861 488 285 12 27 507 35 501 6.06e-94 295
Msa1423320 MtrunA17_Chr8g0357421 35.542 498 295 11 7 494 7 488 6.70e-94 295
Msa1423320 MtrunA17_Chr6g0451741 35.441 522 300 11 12 508 36 545 8.81e-94 296
Msa1423320 MtrunA17_Chr5g0401691 35.728 515 299 12 5 511 23 513 2.06e-93 293
Msa1423320 MtrunA17_Chr4g0058201 35.625 480 290 10 33 507 28 493 2.31e-93 293
Msa1423320 MtrunA17_Chr5g0395331 34.827 491 296 10 9 489 10 486 2.47e-93 293
Msa1423320 MtrunA17_Chr1g0162801 35.700 493 293 13 10 494 14 490 4.14e-93 293
Msa1423320 MtrunA17_Chr5g0445421 32.252 493 289 10 9 493 84 539 5.28e-93 294
Msa1423320 MtrunA17_Chr6g0466331 32.851 484 305 10 2 479 3 472 5.34e-93 292
Msa1423320 MtrunA17_Chr1g0156101 34.183 471 287 8 21 479 23 482 1.33e-92 291
Msa1423320 MtrunA17_Chr2g0304871 37.045 494 279 11 32 508 36 514 1.88e-92 291
Msa1423320 MtrunA17_Chr6g0465511 33.058 484 304 10 2 479 3 472 1.90e-92 291
Msa1423320 MtrunA17_Chr3g0101741 37.176 425 241 10 69 488 1 404 5.81e-92 287
Msa1423320 MtrunA17_Chr8g0357431 34.940 498 299 11 7 494 7 489 6.62e-92 290
Msa1423320 MtrunA17_Chr3g0101821 35.341 498 293 14 7 494 10 488 1.03e-91 289
Msa1423320 MtrunA17_Chr3g0101671 34.362 486 296 11 12 488 15 486 1.47e-91 289
Msa1423320 MtrunA17_Chr4g0011961 33.871 496 313 7 9 500 4 488 3.98e-91 287
Msa1423320 MtrunA17_Chr5g0395321 33.063 493 303 8 2 488 7 478 7.45e-91 288
Msa1423320 MtrunA17_Chr7g0255531 33.462 517 308 13 8 508 1 497 1.09e-90 286
Msa1423320 MtrunA17_Chr3g0101831 34.930 501 295 12 9 494 5 489 4.74e-90 285
Msa1423320 MtrunA17_Chr5g0430091 31.818 506 323 9 6 504 11 501 7.81e-90 284
Msa1423320 MtrunA17_Chr4g0046631 33.667 499 305 9 24 510 36 520 2.17e-89 283
Msa1423320 MtrunA17_Chr6g0451641 34.047 514 307 13 15 508 15 516 2.47e-89 283
Msa1423320 MtrunA17_Chr8g0355961 34.454 476 299 7 32 505 40 504 3.44e-89 282
Msa1423320 MtrunA17_Chr5g0401681 32.998 497 300 8 7 494 5 477 3.56e-89 282
Msa1423320 MtrunA17_Chr4g0052861 34.843 508 294 12 11 506 9 491 3.69e-89 282
Msa1423320 MtrunA17_Chr4g0057001 33.858 508 307 13 12 512 33 518 4.51e-89 283
Msa1423320 MtrunA17_Chr8g0339311 35.546 467 273 9 35 484 45 500 5.21e-89 283
Msa1423320 MtrunA17_Chr6g0466901 34.047 514 310 10 15 508 12 516 1.11e-88 281
Msa1423320 MtrunA17_Chr4g0024771 30.909 495 316 10 9 494 10 487 1.39e-88 281
Msa1423320 MtrunA17_Chr2g0314731 35.174 489 284 11 8 485 7 473 2.17e-88 280
Msa1423320 MtrunA17_Chr4g0008101 34.362 486 295 7 40 508 45 523 5.66e-88 280
Msa1423320 MtrunA17_Chr4g0052851 32.661 496 301 9 15 506 17 483 6.64e-88 279
Msa1423320 MtrunA17_Chr4g0011921 33.936 498 311 10 8 500 5 489 6.69e-88 279
Msa1423320 MtrunA17_Chr5g0431501 34.061 458 287 8 33 485 33 480 1.04e-87 278
Msa1423320 MtrunA17_Chr5g0431461 34.061 458 287 8 33 485 33 480 1.04e-87 278
Msa1423320 MtrunA17_Chr4g0056951 34.052 464 287 8 54 512 64 513 1.89e-87 278
Msa1423320 MtrunA17_Chr6g0466941 33.397 524 318 11 5 508 5 517 2.16e-87 278
Msa1423320 MtrunA17_Chr1g0164211 33.613 476 301 6 32 505 30 492 2.87e-87 277
Msa1423320 MtrunA17_Chr7g0246221 33.878 490 301 8 8 488 9 484 9.20e-87 276
Msa1423320 MtrunA17_Chr4g0011981 33.680 481 305 7 24 500 19 489 1.62e-86 275
Msa1423320 MtrunA17_Chr5g0395381 32.657 493 280 10 2 488 7 453 2.11e-86 274
Msa1423320 MtrunA17_Chr5g0430111 36.534 427 253 7 9 425 9 427 3.36e-86 272
Msa1423320 MtrunA17_Chr5g0431511 33.333 459 291 8 33 486 33 481 4.41e-86 274
Msa1423320 MtrunA17_Chr4g0053621 34.350 492 286 10 33 510 31 499 1.29e-85 273
Msa1423320 MtrunA17_Chr4g0011901 33.546 471 298 8 34 500 30 489 2.32e-84 270
Msa1423320 MtrunA17_Chr4g0017411 32.285 477 289 8 15 488 14 459 2.37e-84 269
Msa1423320 MtrunA17_Chr2g0314721 33.929 504 298 11 8 505 18 492 2.39e-84 270
Msa1423320 MtrunA17_Chr1g0200961 33.137 510 312 11 7 505 4 495 4.22e-84 269
Msa1423320 MtrunA17_Chr1g0197871 33.264 484 300 11 9 486 8 474 1.40e-83 267
Msa1423320 MtrunA17_Chr3g0082701 33.270 526 311 12 8 508 14 524 1.60e-83 268
Msa1423320 MtrunA17_Chr7g0218601 32.692 468 298 9 22 485 23 477 2.28e-83 267
Msa1423320 MtrunA17_Chr5g0419691 32.696 471 302 8 27 493 23 482 3.54e-83 266
Msa1423320 MtrunA17_Chr1g0197881 32.444 487 309 10 9 491 8 478 7.86e-83 265
Msa1423320 MtrunA17_Chr1g0176831 34.200 500 301 10 8 505 38 511 3.00e-82 265
Msa1423320 MtrunA17_Chr1g0197891 32.172 488 310 10 9 491 8 479 8.69e-82 263
Msa1423320 MtrunA17_Chr1g0197851 32.377 488 309 10 9 491 8 479 9.47e-82 263
Msa1423320 MtrunA17_Chr1g0156081 33.406 458 285 7 34 479 57 506 1.30e-81 263
Msa1423320 MtrunA17_Chr4g0011871 33.548 465 291 10 27 485 23 475 1.55e-81 262
Msa1423320 MtrunA17_Chr7g0265611 31.225 506 320 10 8 504 28 514 2.05e-81 263
Msa1423320 MtrunA17_Chr2g0280261 34.038 473 288 11 27 494 28 481 2.75e-81 261
Msa1423320 MtrunA17_Chr7g0246121 33.261 460 278 10 55 503 55 496 2.76e-81 262
Msa1423320 MtrunA17_Chr7g0218611 32.613 463 297 8 27 485 27 478 1.12e-80 260
Msa1423320 MtrunA17_Chr4g0039391 32.484 471 291 10 44 504 45 498 2.73e-80 259
Msa1423320 MtrunA17_Chr1g0174431 56.311 206 89 1 304 508 1 206 4.23e-80 249
Msa1423320 MtrunA17_Chr4g0011881 33.263 472 299 8 26 493 23 482 5.41e-80 258
Msa1423320 MtrunA17_Chr4g0052881 33.984 512 300 12 1 502 3 486 1.14e-79 257
Msa1423320 MtrunA17_Chr2g0296651 32.443 524 315 11 1 512 1 497 1.80e-79 257
Msa1423320 MtrunA17_Chr1g0174421 43.667 300 163 5 4 300 16 312 3.38e-77 246
Msa1423320 MtrunA17_Chr8g0339331 33.470 487 301 10 34 508 39 514 4.60e-77 251
Msa1423320 MtrunA17_Chr7g0246131 31.200 500 332 6 8 503 9 500 1.35e-76 249
Msa1423320 MtrunA17_Chr7g0246151 32.533 458 290 8 55 505 55 500 2.53e-76 249
Msa1423320 MtrunA17_Chr1g0156061 33.259 448 232 8 34 479 56 438 2.41e-75 245
Msa1423320 MtrunA17_Chr6g0451681 31.641 512 283 10 1 508 28 476 3.77e-75 245
Msa1423320 MtrunA17_Chr7g0246181 32.237 456 294 7 55 505 55 500 1.04e-74 244
Msa1423320 MtrunA17_Chr5g0406651 32.479 468 301 8 26 489 23 479 6.25e-74 242
Msa1423320 MtrunA17_Chr1g0213671 32.922 486 307 12 31 507 32 507 6.52e-74 243
Msa1423320 MtrunA17_Chr6g0458561 33.333 486 300 10 34 508 55 527 3.45e-73 241
Msa1423320 MtrunA17_Chr2g0296661 32.272 471 285 10 49 506 47 496 5.37e-73 240
Msa1423320 MtrunA17_Chr5g0419451 32.803 503 291 14 20 506 45 516 2.36e-72 239
Msa1423320 MtrunA17_Chr8g0377341 32.816 515 296 14 16 505 34 523 1.51e-71 237
Msa1423320 MtrunA17_Chr1g0200951 32.290 511 322 12 7 508 34 529 1.09e-70 234
Msa1423320 MtrunA17_Chr1g0160861 35.000 340 207 5 168 505 9 336 5.05e-70 227
Msa1423320 MtrunA17_Chr5g0430071 36.637 333 191 7 183 508 39 358 1.76e-67 221
Msa1423320 MtrunA17_Chr4g0030741 41.438 292 157 5 39 327 69 349 2.70e-65 215
Msa1423320 MtrunA17_Chr8g0346261 31.875 480 298 13 35 506 86 544 7.65e-64 217
Msa1423320 MtrunA17_Chr5g0431591 33.333 312 190 7 181 488 2 299 5.02e-62 206
Msa1423320 MtrunA17_Chr5g0432751 30.000 470 305 13 31 490 31 486 4.01e-60 206
Msa1423320 MtrunA17_Chr3g0107611 29.472 492 315 12 5 474 18 499 4.08e-60 207
Msa1423320 MtrunA17_Chr8g0370641 28.817 524 327 17 10 508 17 519 5.38e-56 196
Msa1423320 MtrunA17_Chr8g0370651 29.622 503 306 18 32 508 43 523 1.48e-55 194
Msa1423320 MtrunA17_Chr3g0107541 27.500 480 322 9 43 508 59 526 1.23e-54 192
Msa1423320 MtrunA17_Chr4g0058211 42.233 206 111 3 303 507 18 216 2.02e-53 179
Msa1423320 MtrunA17_Chr1g0210091 29.778 450 288 13 53 490 85 518 2.12e-53 189
Msa1423320 MtrunA17_Chr1g0207851 37.079 267 156 4 45 302 49 312 5.01e-53 183
Msa1423320 MtrunA17_Chr5g0446101 31.611 329 206 6 181 507 2 313 9.17e-53 181
Msa1423320 MtrunA17_Chr6g0451811 43.269 208 111 3 302 508 3 204 1.53e-52 177
Msa1423320 MtrunA17_Chr2g0314781 50.299 167 75 3 320 485 1 160 2.36e-51 172
Msa1423320 MtrunA17_Chr5g0413911 28.235 510 322 16 20 502 31 523 4.07e-51 182
Msa1423320 MtrunA17_Chr4g0011851 43.229 192 101 3 296 485 8 193 4.07e-50 171
Msa1423320 MtrunA17_Chr8g0390871 38.496 226 131 3 282 505 5 224 4.27e-50 171
Msa1423320 MtrunA17_Chr4g0011941 40.887 203 112 3 304 504 1 197 1.25e-49 169
Msa1423320 MtrunA17_Chr4g0046681 40.291 206 116 3 304 508 31 230 3.18e-49 169
Msa1423320 MtrunA17_Chr6g0463621 41.546 207 116 4 304 508 1 204 3.36e-49 168
Msa1423320 MtrunA17_Chr2g0310351 41.176 204 112 3 304 505 1 198 1.38e-48 166
Msa1423320 MtrunA17_Chr6g0451771 42.211 199 108 3 304 501 22 214 1.24e-47 165
Msa1423320 MtrunA17_Chr1g0198191 28.381 525 328 21 8 511 22 519 1.23e-46 170
Msa1423320 MtrunA17_Chr5g0402981 44.221 199 97 4 315 508 3 192 1.77e-45 158
Msa1423320 MtrunA17_Chr8g0364651 27.376 526 320 18 14 508 5 499 2.22e-45 166
Msa1423320 MtrunA17_Chr5g0409051 24.853 511 351 15 13 501 3 502 2.02e-44 164
Msa1423320 MtrunA17_Chr8g0387101 27.565 497 294 15 40 508 49 507 1.45e-43 161
Msa1423320 MtrunA17_Chr4g0046661 40.000 205 116 3 298 501 19 217 5.25e-43 152
Msa1423320 MtrunA17_Chr5g0423621 43.085 188 97 4 320 505 1 180 3.00e-42 149
Msa1423320 MtrunA17_Chr3g0101591 33.937 221 136 4 270 488 7 219 5.74e-42 150
Msa1423320 MtrunA17_Chr4g0074581 25.859 495 326 16 33 507 69 542 7.94e-42 157
Msa1423320 MtrunA17_Chr3g0086681 44.720 161 85 3 350 508 11 169 4.48e-40 143
Msa1423320 MtrunA17_Chr5g0445371 32.941 255 128 7 242 494 4 217 6.72e-40 144
Msa1423320 MtrunA17_Chr5g0445761 39.548 177 100 2 304 479 1 171 5.17e-39 141
Msa1423320 MtrunA17_Chr2g0280121 26.955 486 296 18 52 508 55 510 7.50e-39 148
Msa1423320 MtrunA17_Chr2g0280081 26.294 483 301 16 48 508 556 1005 9.99e-39 151
Msa1423320 MtrunA17_Chr2g0280081 24.724 453 320 9 52 495 51 491 1.30e-30 126
Msa1423320 MtrunA17_Chr5g0445351 40.000 165 91 3 332 494 52 210 1.59e-38 140
Msa1423320 MtrunA17_Chr6g0477081 32.400 250 149 5 168 414 10 242 1.94e-38 140
Msa1423320 MtrunA17_Chr3g0101541 46.715 137 65 3 355 489 4 134 2.68e-38 137
Msa1423320 MtrunA17_Chr6g0463611 30.952 294 184 9 10 299 28 306 2.22e-37 140
Msa1423320 MtrunA17_Chr5g0444981 46.707 167 81 3 309 474 16 175 3.14e-37 136
Msa1423320 MtrunA17_Chr2g0280071 25.806 527 335 17 7 506 38 535 5.56e-37 145
Msa1423320 MtrunA17_Chr4g0046701 42.857 161 85 3 349 508 4 158 1.04e-36 133
Msa1423320 MtrunA17_Chr2g0334021 24.842 475 315 12 29 485 29 479 5.03e-36 140
Msa1423320 MtrunA17_Chr5g0402971 33.333 264 162 5 31 283 37 297 1.06e-35 135
Msa1423320 MtrunA17_Chr5g0445751 33.455 275 169 8 33 304 44 307 7.31e-35 133
Msa1423320 MtrunA17_Chr4g0030761 41.772 158 67 3 355 505 1 140 9.29e-35 127
Msa1423320 MtrunA17_Chr3g0107551 33.816 207 131 3 303 508 4 205 4.54e-33 125
Msa1423320 MtrunA17_Chr6g0451801 30.034 293 188 6 8 284 14 305 1.44e-32 127
Msa1423320 MtrunA17_Chr3g0105761 36.275 204 122 5 306 508 2 198 5.28e-32 122
Msa1423320 MtrunA17_Chr3g0117301 43.802 121 61 2 355 474 1 115 7.05e-32 119
Msa1423320 MtrunA17_Chr5g0430041 38.776 147 82 3 330 474 1 141 7.89e-32 120
Msa1423320 MtrunA17_Chr2g0280011 33.971 209 124 5 307 508 11 212 1.34e-31 121
Msa1423320 MtrunA17_Chr8g0364631 26.844 488 323 16 33 503 32 502 2.17e-31 127
Msa1423320 MtrunA17_Chr4g0046671 29.368 269 164 6 34 286 44 302 3.30e-31 123
Msa1423320 MtrunA17_Chr5g0445361 41.481 135 72 2 374 507 9 137 8.55e-31 116
Msa1423320 MtrunA17_Chr5g0430151 35.632 174 103 4 334 504 5 172 2.20e-30 117
Msa1423320 MtrunA17_Chr2g0280041 24.230 487 327 13 43 508 71 536 5.51e-30 123
Msa1423320 MtrunA17_Chr4g0028321 43.089 123 64 2 373 494 27 144 9.03e-30 114
Msa1423320 MtrunA17_Chr4g0046691 29.057 265 177 5 33 293 38 295 1.16e-29 118
Msa1423320 MtrunA17_Chr2g0280061 33.019 212 122 6 307 508 11 212 1.96e-29 115
Msa1423320 MtrunA17_Chr3g0116731 38.816 152 72 4 357 507 3 134 8.42e-29 110
Msa1423320 MtrunA17_Chr4g0076171 35.079 191 101 4 320 508 1 170 8.95e-29 112
Msa1423320 MtrunA17_Chr5g0430171 29.596 223 151 3 6 228 11 227 1.32e-27 110
Msa1423320 MtrunA17_Chr8g0381571 27.035 344 216 8 127 465 139 452 1.79e-27 115
Msa1423320 MtrunA17_Chr3g0141801 26.113 494 304 16 7 481 11 462 2.22e-27 115
Msa1423320 MtrunA17_Chr8g0381541 27.035 344 216 8 127 465 139 452 2.68e-27 115
Msa1423320 MtrunA17_Chr4g0011861 27.027 259 180 6 27 281 23 276 1.89e-26 109
Msa1423320 MtrunA17_Chr0c19g0493771 23.666 431 302 10 58 479 211 623 3.01e-26 112
Msa1423320 MtrunA17_Chr5g0396521 34.673 199 98 5 302 473 346 539 1.87e-25 110
Msa1423320 MtrunA17_Chr5g0445411 39.490 157 84 4 15 161 19 174 3.03e-25 102
Msa1423320 MtrunA17_Chr2g0293411 27.352 457 281 21 31 473 39 458 3.68e-25 108
Msa1423320 MtrunA17_Chr1g0151221 22.814 469 317 12 35 472 41 495 9.52e-25 107
Msa1423320 MtrunA17_Chr8g0372591 33.562 146 94 2 302 446 1 144 1.61e-24 99.4
Msa1423320 MtrunA17_Chr3g0135841 22.622 473 318 13 35 472 44 503 3.42e-24 106
Msa1423320 MtrunA17_Chr6g0451761 28.920 287 158 8 15 284 17 274 1.13e-23 100
Msa1423320 MtrunA17_Chr4g0011931 27.536 276 193 5 9 281 4 275 4.09e-23 99.8
Msa1423320 MtrunA17_Chr5g0400411 25.333 450 285 13 33 469 45 456 5.27e-23 102
Msa1423320 MtrunA17_Chr1g0176851 26.778 239 170 2 120 358 1 234 6.54e-23 97.4
Msa1423320 MtrunA17_Chr1g0179811 22.931 423 299 9 58 470 101 506 3.84e-22 99.8
Msa1423320 MtrunA17_Chr3g0117321 42.149 121 69 1 32 152 6 125 4.90e-22 91.7
Msa1423320 MtrunA17_Chr1g0203151 27.596 337 202 11 173 482 169 490 2.89e-21 97.1
Msa1423320 MtrunA17_Chr1g0203141 26.852 324 213 8 163 482 191 494 4.88e-21 96.3
Msa1423320 MtrunA17_Chr2g0310371 34.722 144 93 1 8 151 3 145 2.05e-20 87.8
Msa1423320 MtrunA17_Chr8g0339861 26.113 337 207 11 129 457 139 441 2.92e-20 93.6
Msa1423320 MtrunA17_Chr2g0293421 24.115 452 291 18 31 469 43 455 1.81e-19 91.3
Msa1423320 MtrunA17_Chr8g0351401 21.127 497 340 15 34 504 39 509 3.91e-19 90.5
Msa1423320 MtrunA17_Chr8g0372711 30.435 207 129 3 276 478 265 460 5.06e-19 90.1
Msa1423320 MtrunA17_Chr6g0472221 26.168 321 205 11 171 482 208 505 8.03e-19 89.4
Msa1423320 MtrunA17_Chr5g0408181 23.918 485 302 14 9 481 13 442 1.02e-18 89.0
Msa1423320 MtrunA17_Chr1g0164371 25.551 454 290 15 32 479 43 454 1.08e-18 89.0
Msa1423320 MtrunA17_Chr6g0479681 26.062 353 203 13 173 482 171 508 1.26e-18 89.0
Msa1423320 MtrunA17_Chr8g0369791 24.694 490 295 17 8 476 3 439 5.51e-18 86.7
Msa1423320 MtrunA17_Chr5g0431631 33.333 138 89 2 6 141 23 159 9.60e-18 80.5
Msa1423320 MtrunA17_Chr3g0116721 32.663 199 113 9 141 329 2 189 2.12e-17 80.5
Msa1423320 MtrunA17_Chr1g0154731 26.519 181 122 2 303 482 312 482 4.01e-17 84.3
Msa1423320 MtrunA17_Chr2g0313771 24.784 464 301 18 47 499 86 512 4.88e-17 84.0
Msa1423320 MtrunA17_Chr7g0215181 29.508 244 148 8 246 482 262 488 7.09e-17 83.6
Msa1423320 MtrunA17_Chr6g0449341 29.493 217 138 7 276 484 333 542 9.85e-17 83.2
Msa1423320 MtrunA17_Chr7g0248991 31.613 155 100 3 277 430 212 361 1.51e-16 81.3
Msa1423320 MtrunA17_Chr8g0380931 25.000 256 165 5 229 476 243 479 1.78e-16 82.0
Msa1423320 MtrunA17_Chr2g0313781 25.882 255 167 7 237 482 266 507 2.97e-16 81.6
Msa1423320 MtrunA17_Chr2g0288661 25.806 310 205 11 181 482 205 497 3.45e-16 81.3
Msa1423320 MtrunA17_Chr3g0089361 26.400 250 159 7 229 474 221 449 4.02e-16 80.9
Msa1423320 MtrunA17_Chr5g0403931 27.193 228 146 3 256 478 244 456 4.26e-16 80.9
Msa1423320 MtrunA17_Chr3g0104351 21.748 469 310 15 36 469 36 482 5.01e-16 80.9
Msa1423320 MtrunA17_Chr6g0449331 28.505 214 140 6 264 469 273 481 5.87e-16 80.5
Msa1423320 MtrunA17_Chr5g0400421 21.508 451 294 12 33 465 45 453 6.77e-16 80.1
Msa1423320 MtrunA17_Chr4g0063221 29.586 169 112 2 303 470 324 486 7.26e-16 80.5
Msa1423320 MtrunA17_Chr2g0313761 27.451 255 160 10 242 482 247 490 8.89e-16 80.1
Msa1423320 MtrunA17_Chr3g0128461 23.567 314 223 8 171 483 207 504 8.92e-16 80.1
Msa1423320 MtrunA17_Chr7g0225531 23.422 491 319 19 9 472 20 480 1.04e-15 79.7
Msa1423320 MtrunA17_Chr3g0107561 24.299 321 208 10 1 299 9 316 1.38e-15 78.2
Msa1423320 MtrunA17_Chr4g0056981 45.714 70 37 1 331 399 2 71 3.15e-15 70.5
Msa1423320 MtrunA17_Chr2g0313791 24.506 253 173 7 237 482 249 490 3.30e-15 78.2
Msa1423320 MtrunA17_Chr8g0341951 29.258 229 141 6 250 474 235 446 3.99e-15 77.8
Msa1423320 MtrunA17_Chr2g0321171 24.074 378 241 11 123 484 130 477 4.09e-15 77.8
Msa1423320 MtrunA17_Chr3g0113321 23.636 220 153 4 259 475 235 442 4.28e-15 77.8
Msa1423320 MtrunA17_Chr1g0153371 25.738 474 300 19 8 472 9 439 5.26e-15 77.4
Msa1423320 MtrunA17_Chr3g0105751 23.510 302 206 7 13 299 27 318 6.61e-15 76.6
Msa1423320 MtrunA17_Chr2g0313801 26.106 226 148 5 266 482 280 495 7.28e-15 77.0
Msa1423320 MtrunA17_Chr3g0089351 29.412 204 128 6 273 474 178 367 1.13e-14 75.9
Msa1423320 MtrunA17_Chr8g0371761 29.054 148 90 2 323 458 1 145 1.40e-14 71.2
Msa1423320 MtrunA17_Chr5g0430051 35.780 109 65 2 8 112 9 116 1.47e-14 70.1
Msa1423320 MtrunA17_Chr5g0397971 23.400 453 298 15 32 474 30 443 1.66e-14 75.9
Msa1423320 MtrunA17_Chr2g0313811 26.106 226 148 6 266 482 292 507 1.89e-14 75.9
Msa1423320 MtrunA17_Chr4g0076181 42.105 76 44 0 69 144 1 76 2.27e-14 70.9
Msa1423320 MtrunA17_Chr6g0484771 28.226 124 89 0 69 192 1 124 2.59e-14 70.5
Msa1423320 MtrunA17_Chr5g0431601 39.759 83 49 1 69 151 1 82 2.71e-14 68.2
Msa1423320 MtrunA17_Chr8g0383801 52.632 57 23 1 405 461 3 55 2.74e-14 68.9
Msa1423320 MtrunA17_Chr1g0163451 23.442 337 228 10 161 479 176 500 2.79e-14 75.5
Msa1423320 MtrunA17_Chr8g0380471 26.613 248 166 6 244 485 223 460 2.80e-14 75.1
Msa1423320 MtrunA17_Chr5g0445341 42.169 83 47 1 69 150 1 83 3.54e-14 68.2
Msa1423320 MtrunA17_Chr7g0219961 25.000 252 161 6 229 474 207 436 3.67e-14 74.7
Msa1423320 MtrunA17_Chr8g0364081 22.518 413 262 18 101 482 135 520 4.33e-14 74.7
Msa1423320 MtrunA17_Chr5g0443731 22.658 459 297 19 32 474 28 444 5.83e-14 74.3
Msa1423320 MtrunA17_Chr8g0373441 22.558 430 274 12 15 421 10 403 7.19e-14 73.6
Msa1423320 MtrunA17_Chr4g0038271 23.307 502 319 17 1 469 58 526 8.75e-14 73.9
Msa1423320 MtrunA17_Chr6g0449351 24.670 227 160 5 259 479 218 439 1.02e-13 73.6
Msa1423320 MtrunA17_Chr7g0262111 25.581 215 149 2 269 482 280 484 1.83e-13 72.8
Msa1423320 MtrunA17_Chr3g0107501 23.153 203 144 3 276 474 255 449 2.17e-13 72.4
Msa1423320 MtrunA17_Chr8g0372331 33.594 128 80 3 381 508 2 124 2.60e-13 67.0
Msa1423320 MtrunA17_Chr1g0163421 23.922 255 175 8 248 496 286 527 5.00e-13 71.6
Msa1423320 MtrunA17_Chr1g0163281 22.034 472 300 19 38 472 48 488 5.62e-13 71.2
Msa1423320 MtrunA17_Chr7g0226771 25.909 220 140 5 259 474 243 443 5.63e-13 71.2
Msa1423320 MtrunA17_Chr3g0078411 24.752 202 139 3 276 474 246 437 8.65e-13 70.5
Msa1423320 MtrunA17_Chr8g0351461 21.584 505 333 20 10 482 14 487 1.63e-12 69.7
Msa1423320 MtrunA17_Chr7g0235261 22.706 436 299 16 58 482 81 489 2.00e-12 69.3
Msa1423320 MtrunA17_Chr1g0163501 22.995 374 261 9 134 492 127 488 3.24e-12 68.9
Msa1423320 MtrunA17_Chr3g0107511 24.000 175 121 2 304 474 283 449 4.37e-12 68.2
Msa1423320 MtrunA17_Chr6g0472171 31.579 133 76 4 356 482 14 137 6.72e-12 63.9
Msa1423320 MtrunA17_Chr5g0404861 29.688 128 82 1 347 474 14 133 6.89e-12 63.9
Msa1423320 MtrunA17_Chr1g0163491 26.250 240 137 8 250 479 288 497 1.40e-11 67.0
Msa1423320 MtrunA17_Chr5g0445541 33.071 127 78 3 9 129 10 135 1.93e-11 62.0
Msa1423320 MtrunA17_Chr1g0171041 27.053 207 129 6 301 495 303 499 2.44e-11 65.9
Msa1423320 MtrunA17_Chr2g0310361 25.714 140 100 2 163 302 3 138 3.70e-11 61.2
Msa1423320 MtrunA17_Chr6g0455461 23.529 187 131 2 291 474 260 437 4.20e-11 65.1
Msa1423320 MtrunA17_Chr8g0381561 35.135 111 62 1 355 465 3 103 9.22e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1423320 AT5G06900.1 40.196 510 280 9 1 505 1 490 5.05e-132 393
Msa1423320 AT2G42250.1 40.041 482 280 5 32 511 40 514 1.63e-125 377
Msa1423320 AT5G06905.1 41.597 476 264 6 11 476 8 479 1.08e-120 365
Msa1423320 AT5G07990.1 38.402 513 293 11 8 508 2 503 6.25e-118 357
Msa1423320 AT3G20940.1 38.353 498 290 9 18 510 27 512 1.31e-116 354
Msa1423320 AT5G47990.1 38.745 462 266 8 54 512 63 510 1.29e-112 343
Msa1423320 AT3G20950.1 36.852 521 305 10 2 510 7 515 2.11e-112 343
Msa1423320 AT3G20130.1 38.578 464 272 7 45 505 53 506 2.15e-112 343
Msa1423320 AT1G50520.1 35.977 517 301 10 10 511 13 514 3.05e-112 343
Msa1423320 AT1G50560.1 37.331 517 289 12 10 508 13 512 9.41e-109 334
Msa1423320 AT3G20100.1 36.986 511 305 8 3 505 5 506 2.66e-107 330
Msa1423320 AT3G20120.4 38.065 465 273 6 50 511 58 510 1.17e-106 328
Msa1423320 AT4G15360.1 35.547 512 308 10 1 504 5 502 7.84e-106 327
Msa1423320 AT3G20090.2 36.559 465 282 7 45 506 54 508 1.66e-105 325
Msa1423320 AT2G27000.1 38.116 467 273 9 45 506 50 505 3.10e-105 325
Msa1423320 AT4G12320.1 34.961 512 319 7 2 510 13 513 7.71e-105 323
Msa1423320 AT4G15350.1 36.809 470 282 7 46 511 48 506 1.54e-104 323
Msa1423320 AT2G14100.1 36.797 462 278 6 50 509 60 509 2.23e-104 322
Msa1423320 AT1G13080.1 36.791 511 293 14 7 505 7 499 3.21e-104 322
Msa1423320 AT3G20110.1 36.779 503 294 9 10 506 12 496 4.65e-104 321
Msa1423320 AT4G15330.1 34.104 519 325 9 1 515 5 510 9.22e-103 318
Msa1423320 AT4G12300.1 34.387 506 310 7 8 510 25 511 2.27e-102 317
Msa1423320 AT3G20140.1 36.820 478 284 8 31 505 40 502 3.10e-102 317
Msa1423320 AT3G32047.1 36.878 442 265 5 50 490 59 487 4.37e-101 313
Msa1423320 AT3G20130.2 37.284 464 250 9 45 505 53 478 5.77e-100 310
Msa1423320 AT3G26310.1 34.413 494 298 10 13 494 4 483 1.09e-99 310
Msa1423320 AT3G48280.1 35.363 509 299 12 8 508 3 489 7.51e-99 307
Msa1423320 AT3G20960.2 34.667 450 282 6 60 507 68 507 2.28e-98 307
Msa1423320 AT3G26170.1 35.283 513 302 14 6 505 4 499 8.49e-98 305
Msa1423320 AT3G20080.2 36.049 491 301 9 20 507 29 509 1.10e-97 305
Msa1423320 AT3G20080.1 36.049 491 301 9 20 507 29 509 1.10e-97 305
Msa1423320 AT4G36220.1 34.719 481 290 5 41 508 47 516 3.47e-97 304
Msa1423320 AT5G67310.1 35.616 511 297 14 10 511 18 505 9.49e-97 302
Msa1423320 AT2G45560.1 34.933 521 315 10 4 512 4 512 6.89e-96 300
Msa1423320 AT4G12310.1 34.820 471 296 5 43 510 53 515 7.50e-96 300
Msa1423320 AT4G31940.1 35.960 495 289 12 35 509 33 519 8.56e-96 300
Msa1423320 AT3G26300.1 35.614 497 289 14 13 494 4 484 1.43e-95 299
Msa1423320 AT5G44620.1 33.333 471 300 6 43 510 55 514 1.34e-94 297
Msa1423320 AT5G42580.1 35.683 454 266 8 55 505 61 491 1.80e-94 296
Msa1423320 AT3G26180.1 34.570 512 307 13 6 505 4 499 3.53e-94 295
Msa1423320 AT2G30770.1 37.657 478 275 11 33 504 33 493 4.18e-94 295
Msa1423320 AT5G25120.1 33.794 506 309 11 7 505 5 491 4.62e-94 295
Msa1423320 AT4G22710.1 34.322 472 293 8 43 510 62 520 8.24e-94 295
Msa1423320 AT4G31970.1 35.425 494 292 10 35 509 33 518 1.09e-93 295
Msa1423320 AT4G22690.1 34.322 472 293 8 43 510 93 551 2.76e-93 295
Msa1423320 AT4G13310.1 34.623 491 298 11 22 504 19 494 3.00e-93 293
Msa1423320 AT3G26280.1 36.008 511 287 12 9 505 15 499 3.31e-93 293
Msa1423320 AT3G26280.2 36.008 511 287 12 9 505 32 516 5.41e-93 293
Msa1423320 AT5G04330.1 33.195 482 306 8 34 508 33 505 7.40e-92 290
Msa1423320 AT5G25180.1 34.167 480 292 10 33 505 29 491 1.00e-91 289
Msa1423320 AT4G15330.2 33.141 519 302 11 1 515 5 482 2.69e-91 288
Msa1423320 AT1G13110.1 34.653 505 303 11 15 507 14 503 2.77e-91 288
Msa1423320 AT1G11610.1 37.526 477 277 10 33 504 33 493 1.12e-90 286
Msa1423320 AT4G37430.1 35.453 519 298 14 7 511 3 498 1.23e-90 286
Msa1423320 AT4G31500.1 33.939 495 308 10 20 508 18 499 1.56e-90 286
Msa1423320 AT3G20960.1 35.351 413 255 6 97 507 2 404 2.29e-90 283
Msa1423320 AT3G48270.1 34.914 464 272 12 35 493 33 471 2.50e-90 285
Msa1423320 AT2G45570.1 35.792 461 273 8 55 505 59 506 2.98e-90 286
Msa1423320 AT4G37410.1 34.951 515 304 11 6 511 3 495 3.96e-90 285
Msa1423320 AT1G11610.2 38.022 455 262 9 33 483 33 471 4.74e-90 285
Msa1423320 AT1G28430.1 31.721 517 318 10 9 510 14 510 1.41e-89 284
Msa1423320 AT3G26330.1 34.839 465 275 10 34 488 32 478 1.55e-89 283
Msa1423320 AT3G48300.1 35.556 450 266 10 35 481 31 459 1.79e-89 283
Msa1423320 AT3G48300.2 35.556 450 266 10 35 481 33 461 1.89e-89 283
Msa1423320 AT3G48310.1 34.763 443 266 8 35 474 33 455 1.92e-89 283
Msa1423320 AT5G36220.1 34.857 525 303 12 1 511 1 500 2.15e-89 283
Msa1423320 AT5G25140.1 33.004 506 309 13 13 505 3 491 2.24e-89 283
Msa1423320 AT3G26150.1 34.185 509 309 14 8 505 6 499 5.34e-89 282
Msa1423320 AT3G26320.1 33.617 470 290 10 26 488 24 478 6.46e-89 282
Msa1423320 AT2G30750.1 37.448 478 276 11 33 504 33 493 9.22e-89 281
Msa1423320 AT5G25130.1 33.267 505 313 10 7 505 5 491 1.10e-88 281
Msa1423320 AT1G74550.1 34.274 496 297 11 11 501 3 474 1.37e-88 281
Msa1423320 AT2G45580.1 36.207 464 267 8 55 505 59 506 1.41e-88 281
Msa1423320 AT1G33720.1 33.723 513 318 10 4 505 4 505 2.28e-88 281
Msa1423320 AT4G37330.1 34.911 507 294 13 5 503 5 483 2.71e-88 280
Msa1423320 AT3G20120.2 38.342 386 223 6 129 511 1 374 4.02e-88 276
Msa1423320 AT3G20120.3 38.342 386 223 6 129 511 1 374 4.02e-88 276
Msa1423320 AT3G20120.1 38.342 386 223 6 129 511 1 374 4.02e-88 276
Msa1423320 AT3G26160.1 33.792 509 311 13 8 505 6 499 4.81e-88 280
Msa1423320 AT4G15380.1 33.850 452 285 7 60 510 69 507 4.97e-88 280
Msa1423320 AT4G13290.1 34.827 491 289 12 22 504 20 487 5.25e-88 279
Msa1423320 AT1G01280.1 32.839 472 303 6 43 508 41 504 9.25e-88 279
Msa1423320 AT2G40890.1 32.943 513 307 14 14 508 3 496 1.11e-87 279
Msa1423320 AT2G45550.1 33.333 513 320 9 4 505 4 505 1.41e-87 279
Msa1423320 AT4G12330.1 31.857 474 302 8 43 510 55 513 2.87e-87 278
Msa1423320 AT2G27010.1 32.976 467 279 8 45 506 46 483 5.07e-87 277
Msa1423320 AT4G37400.1 35.208 480 280 11 43 513 40 497 1.15e-86 276
Msa1423320 AT3G26210.1 33.824 476 293 11 43 510 40 501 2.32e-86 275
Msa1423320 AT2G24180.1 33.403 479 295 10 33 505 36 496 5.92e-86 274
Msa1423320 AT5G57260.1 33.678 484 299 9 34 508 31 501 9.31e-86 274
Msa1423320 AT5G24950.1 34.100 478 293 11 33 504 32 493 1.94e-85 273
Msa1423320 AT4G37370.1 33.269 517 307 12 2 508 1 489 2.10e-85 273
Msa1423320 AT3G26200.1 34.845 485 294 11 32 507 27 498 2.48e-85 273
Msa1423320 AT3G48290.1 33.546 471 288 11 34 500 34 483 6.57e-85 271
Msa1423320 AT3G26230.1 33.071 508 319 14 8 507 3 497 7.26e-85 271
Msa1423320 AT2G25160.1 34.411 526 304 14 8 508 4 513 1.19e-84 271
Msa1423320 AT3G26190.1 35.052 485 293 12 32 507 27 498 1.81e-84 270
Msa1423320 AT3G26290.1 34.091 484 291 12 35 508 33 498 2.72e-84 270
Msa1423320 AT3G26290.2 34.298 484 290 12 35 508 46 511 2.98e-84 270
Msa1423320 AT5G57220.1 33.742 489 290 13 7 488 3 464 1.16e-82 265
Msa1423320 AT4G37340.1 34.269 499 290 11 2 490 1 471 1.78e-82 265
Msa1423320 AT3G48320.1 32.454 493 307 11 12 500 12 482 5.98e-82 263
Msa1423320 AT3G61040.1 33.814 485 288 8 32 505 32 494 1.33e-81 263
Msa1423320 AT3G26270.1 33.473 478 302 11 33 505 32 498 2.69e-81 262
Msa1423320 AT3G20090.1 36.220 381 231 6 129 507 1 371 3.96e-81 258
Msa1423320 AT2G23220.1 34.843 508 282 17 19 507 31 508 5.32e-81 262
Msa1423320 AT4G37310.1 33.333 507 306 11 9 500 4 493 5.99e-81 261
Msa1423320 AT2G02580.1 32.039 515 311 12 13 508 4 498 7.90e-81 261
Msa1423320 AT1G74540.1 32.738 504 303 12 7 501 4 480 8.84e-81 261
Msa1423320 AT4G31950.1 34.343 495 285 14 35 509 33 507 8.92e-81 261
Msa1423320 AT4G37360.1 33.925 507 303 12 4 502 1 483 1.35e-80 260
Msa1423320 AT2G05180.1 36.408 412 247 5 23 424 22 428 6.56e-80 256
Msa1423320 AT3G20080.4 37.008 381 229 7 129 507 1 372 1.61e-79 254
Msa1423320 AT3G20080.5 37.008 381 229 7 129 507 1 372 1.61e-79 254
Msa1423320 AT3G20080.6 37.008 381 229 7 129 507 1 372 1.61e-79 254
Msa1423320 AT3G20080.3 37.008 381 229 7 129 507 1 372 1.61e-79 254
Msa1423320 AT1G13090.2 33.769 459 268 12 31 474 26 463 3.02e-79 256
Msa1423320 AT3G44250.1 36.538 468 270 12 32 488 27 478 4.03e-79 256
Msa1423320 AT3G48290.2 31.791 497 288 12 34 500 34 509 4.75e-79 256
Msa1423320 AT4G37320.1 31.746 504 312 12 9 503 6 486 9.64e-79 255
Msa1423320 AT3G52970.1 32.265 499 322 12 19 507 21 513 1.84e-78 255
Msa1423320 AT3G26830.1 33.612 479 288 11 7 474 4 463 2.45e-78 254
Msa1423320 AT5G24960.1 34.447 479 294 10 33 506 33 496 4.03e-78 254
Msa1423320 AT3G28740.1 34.362 486 285 10 33 507 39 501 3.89e-77 251
Msa1423320 AT3G26220.1 33.922 510 308 15 10 507 8 500 9.05e-77 250
Msa1423320 AT4G13770.1 31.148 488 311 12 27 504 24 496 3.00e-76 249
Msa1423320 AT3G52970.2 31.384 513 322 12 19 507 21 527 3.87e-76 249
Msa1423320 AT1G13100.1 33.480 454 268 10 61 496 52 489 4.64e-76 248
Msa1423320 AT3G53300.1 33.195 482 302 10 32 505 27 496 1.26e-75 247
Msa1423320 AT3G25180.1 32.669 502 309 12 19 508 23 507 1.21e-74 245
Msa1423320 AT2G23190.1 32.567 522 304 17 4 507 45 536 2.73e-74 245
Msa1423320 AT5G42590.1 32.577 485 306 12 2 481 1 469 4.42e-74 243
Msa1423320 AT3G53280.1 33.607 488 294 15 32 508 27 495 2.21e-72 239
Msa1423320 AT1G33720.4 35.602 382 231 6 129 505 2 373 7.58e-72 234
Msa1423320 AT1G33720.3 35.602 382 231 6 129 505 2 373 7.58e-72 234
Msa1423320 AT1G33720.5 35.602 382 231 6 129 505 2 373 7.58e-72 234
Msa1423320 AT1G33730.1 36.631 374 222 6 132 500 1 364 1.43e-71 233
Msa1423320 AT1G33730.2 36.631 374 222 6 132 500 1 364 1.43e-71 233
Msa1423320 AT2G45580.2 37.921 356 192 8 163 505 13 352 7.58e-71 230
Msa1423320 AT1G66540.1 35.969 392 211 10 121 500 5 368 1.01e-70 231
Msa1423320 AT5G10600.1 29.572 514 333 13 3 508 17 509 7.96e-70 232
Msa1423320 AT5G35715.1 32.511 446 280 10 69 505 1 434 4.12e-69 228
Msa1423320 AT1G13080.2 35.405 370 212 12 148 505 27 381 4.34e-69 226
Msa1423320 AT5G10610.1 28.740 508 326 12 13 506 4 489 5.43e-69 230
Msa1423320 AT2G46660.1 32.489 474 294 13 35 503 72 524 6.57e-69 230
Msa1423320 AT4G13310.2 34.646 381 234 8 22 396 19 390 9.88e-69 226
Msa1423320 AT1G13710.1 32.311 489 282 14 35 506 55 511 1.36e-68 229
Msa1423320 AT1G74110.1 30.682 528 326 15 2 506 25 535 3.71e-68 228
Msa1423320 AT3G20935.1 36.311 347 189 9 188 511 1 338 3.09e-67 221
Msa1423320 AT1G33720.2 33.661 407 230 8 129 505 2 398 2.04e-66 220
Msa1423320 AT3G61880.1 32.305 486 290 17 35 506 68 528 1.48e-65 221
Msa1423320 AT3G61880.2 32.305 486 290 17 35 506 68 528 2.98e-65 221
Msa1423320 AT5G09970.1 31.458 480 297 16 35 502 71 530 4.96e-65 220
Msa1423320 AT1G01190.1 32.780 482 282 19 32 500 72 524 8.53e-64 217
Msa1423320 AT1G01190.2 32.780 482 282 19 32 500 77 529 1.01e-63 217
Msa1423320 AT1G79370.1 27.977 529 340 13 8 508 18 533 7.69e-63 214
Msa1423320 AT1G58260.1 27.168 519 349 10 11 508 10 520 2.40e-62 213
Msa1423320 AT1G66540.2 37.654 324 172 9 182 500 11 309 3.48e-62 207
Msa1423320 AT5G05260.2 29.026 503 310 14 33 508 40 522 4.81e-62 212
Msa1423320 AT4G20240.1 34.422 398 246 7 32 425 32 418 2.25e-61 208
Msa1423320 AT2G22330.1 27.290 513 340 13 4 500 31 526 5.04e-61 210
Msa1423320 AT2G22330.2 27.290 513 340 13 4 500 54 549 7.83e-61 210
Msa1423320 AT5G36220.2 37.069 348 187 9 171 511 32 354 9.82e-61 204
Msa1423320 AT4G39950.1 27.096 513 340 14 4 500 30 524 3.25e-60 207
Msa1423320 AT4G39950.2 27.096 513 340 14 4 500 70 564 6.70e-60 207
Msa1423320 AT5G05260.1 28.370 497 289 13 33 508 40 490 5.12e-58 201
Msa1423320 AT3G26180.2 38.868 265 145 7 246 505 113 365 1.72e-55 190
Msa1423320 AT2G25160.2 33.333 411 245 12 8 400 4 403 1.75e-54 189
Msa1423320 AT4G20240.2 34.239 368 228 6 32 396 32 388 4.55e-54 187
Msa1423320 AT2G30490.1 28.051 467 305 12 53 502 53 505 5.69e-53 187
Msa1423320 AT5G24960.2 33.693 371 228 8 33 397 33 391 4.74e-52 182
Msa1423320 AT2G45580.3 33.051 354 215 6 55 396 59 402 1.40e-51 181
Msa1423320 AT1G16400.1 26.527 524 352 13 6 508 16 527 8.62e-51 182
Msa1423320 AT1G16410.1 25.540 509 357 10 15 508 27 528 5.93e-50 180
Msa1423320 AT1G64940.1 27.096 513 336 16 15 506 12 507 2.05e-49 177
Msa1423320 AT1G64930.1 27.944 501 325 16 25 506 24 507 4.93e-47 171
Msa1423320 AT3G25180.2 31.414 382 241 10 19 388 23 395 6.58e-47 168
Msa1423320 AT3G61040.2 30.343 379 238 6 32 400 32 394 6.09e-46 166
Msa1423320 AT5G04630.1 26.908 524 342 18 1 503 1 504 2.02e-45 167
Msa1423320 AT1G64950.1 27.711 498 327 15 26 506 25 506 6.10e-44 162
Msa1423320 AT3G10560.1 26.602 515 335 16 16 509 22 514 1.00e-43 162
Msa1423320 AT3G53290.1 30.805 435 253 13 84 507 8 405 1.22e-43 159
Msa1423320 AT3G03470.1 25.143 525 356 16 2 506 1 508 3.96e-43 160
Msa1423320 AT2G12190.1 26.600 500 330 16 26 505 25 507 6.21e-42 157
Msa1423320 AT5G35917.1 26.243 503 283 16 33 508 42 483 1.51e-41 155
Msa1423320 AT1G11600.1 26.154 520 338 17 8 503 8 505 6.57e-41 154
Msa1423320 AT3G10570.1 26.882 465 299 16 61 508 73 513 8.27e-40 151
Msa1423320 AT5G04660.1 25.870 460 311 13 61 508 71 512 8.32e-40 151
Msa1423320 AT5G25900.1 26.383 470 307 15 33 485 41 488 1.03e-39 151
Msa1423320 AT1G64900.1 25.615 488 318 14 41 506 38 502 1.28e-34 136
Msa1423320 AT5G61320.1 25.847 472 292 12 49 505 57 485 1.67e-34 136
Msa1423320 AT1G16410.2 24.235 392 278 7 15 391 27 414 1.56e-31 126
Msa1423320 AT1G31800.1 24.736 473 311 13 58 508 132 581 1.09e-24 108
Msa1423320 AT2G45560.2 27.333 300 202 7 4 293 4 297 2.07e-24 104
Msa1423320 AT4G15110.1 34.359 195 104 4 302 473 354 547 2.55e-24 107
Msa1423320 AT3G53305.1 40.397 151 77 4 342 490 175 314 2.14e-23 101
Msa1423320 AT1G19630.1 25.678 479 288 18 20 478 20 450 4.39e-23 102
Msa1423320 AT1G13090.1 32.919 161 107 1 31 191 26 185 7.43e-23 99.4
Msa1423320 AT2G45560.3 28.151 238 162 4 4 233 4 240 1.60e-22 97.1
Msa1423320 AT1G19630.3 25.420 476 287 18 20 475 20 447 9.14e-22 98.6
Msa1423320 AT3G26125.1 22.353 510 335 17 36 506 44 531 1.33e-21 98.6
Msa1423320 AT1G63710.1 24.291 494 317 16 4 469 9 473 1.45e-20 95.5
Msa1423320 AT3G53130.1 22.170 424 301 12 58 470 101 506 2.53e-20 94.7
Msa1423320 AT4G39490.1 22.316 475 323 14 38 480 33 493 3.07e-20 94.4
Msa1423320 AT1G57750.1 26.459 257 158 7 234 479 236 472 7.59e-20 92.8
Msa1423320 AT4G19230.1 24.691 486 294 19 9 476 5 436 8.01e-20 92.8
Msa1423320 AT2G26170.2 29.787 235 150 6 246 472 178 405 1.10e-19 92.0
Msa1423320 AT2G26170.1 29.787 235 150 6 246 472 261 488 1.61e-19 92.0
Msa1423320 AT5G05690.3 29.064 203 130 4 276 475 132 323 4.21e-19 89.4
Msa1423320 AT5G24910.1 25.649 308 211 7 181 483 218 512 7.36e-19 90.1
Msa1423320 AT5G05690.1 29.064 203 130 4 276 475 251 442 7.96e-19 89.7
Msa1423320 AT2G26710.1 27.365 296 192 7 181 472 208 484 9.66e-19 89.7
Msa1423320 AT3G19270.2 24.025 487 320 13 1 480 1 444 1.06e-18 89.4
Msa1423320 AT1G19630.2 25.592 422 257 16 20 421 20 404 2.49e-18 87.8
Msa1423320 AT5G24900.2 29.098 244 155 9 246 482 157 389 4.28e-18 87.0
Msa1423320 AT4G19230.2 25.160 469 279 19 9 459 5 419 4.44e-18 87.4
Msa1423320 AT1G65340.1 26.984 252 169 6 234 479 237 479 4.71e-18 87.4
Msa1423320 AT5G35920.1 33.557 149 92 4 361 508 6 148 5.07e-18 81.6
Msa1423320 AT5G24900.1 29.098 244 155 9 246 482 274 506 5.86e-18 87.4
Msa1423320 AT5G02900.1 28.839 267 156 10 234 480 203 455 9.36e-18 86.3
Msa1423320 AT5G52400.1 25.228 329 211 11 162 482 197 498 1.18e-17 86.3
Msa1423320 AT5G45340.1 24.689 482 290 16 8 476 15 436 1.45e-17 85.9
Msa1423320 AT4G20235.1 26.800 250 150 7 15 257 11 234 1.74e-17 84.3
Msa1423320 AT4G20235.1 32.450 151 83 5 337 485 206 339 2.07e-12 68.9
Msa1423320 AT1G75130.1 25.116 215 150 3 269 482 278 482 2.21e-17 85.5
Msa1423320 AT3G56630.1 25.591 465 283 19 40 472 33 466 2.30e-17 85.5
Msa1423320 AT1G47620.1 25.000 256 176 7 234 480 244 492 2.79e-17 85.1
Msa1423320 AT3G14610.1 22.588 425 308 12 60 482 86 491 2.92e-17 85.1
Msa1423320 AT1G78490.1 23.110 463 289 12 32 474 34 449 3.57e-17 84.7
Msa1423320 AT3G19270.1 23.760 484 319 13 1 477 1 441 3.92e-17 84.3
Msa1423320 AT2G29090.2 24.667 450 293 11 32 476 48 456 4.14e-17 84.3
Msa1423320 AT2G29090.1 24.667 450 293 11 32 476 48 456 4.14e-17 84.3
Msa1423320 AT3G14620.1 27.397 219 147 5 266 482 286 494 4.29e-17 84.7
Msa1423320 AT2G45510.1 23.340 467 302 14 46 481 44 485 4.63e-17 84.3
Msa1423320 AT2G44890.1 22.727 440 298 11 64 481 66 485 4.63e-17 84.3
Msa1423320 AT1G24540.1 22.653 490 332 18 19 480 27 497 4.67e-17 84.3
Msa1423320 AT4G39510.1 28.571 259 162 9 234 480 235 482 4.80e-17 84.3
Msa1423320 AT4G32170.1 23.316 386 259 13 115 480 112 480 1.39e-16 82.8
Msa1423320 AT1G73340.1 22.642 477 318 17 6 475 22 454 2.07e-16 82.4
Msa1423320 AT3G48520.1 22.515 493 327 19 10 475 7 471 2.47e-16 82.0
Msa1423320 AT2G23180.1 25.869 259 174 7 234 479 235 488 5.05e-16 81.3
Msa1423320 AT5G52320.2 26.295 251 171 6 234 479 237 478 8.34e-16 80.5
Msa1423320 AT5G52320.1 26.295 251 171 6 234 479 237 478 8.63e-16 80.5
Msa1423320 AT5G38970.2 22.222 252 168 5 229 474 128 357 1.04e-15 79.3
Msa1423320 AT5G38970.4 22.222 252 168 5 229 474 128 357 1.04e-15 79.3
Msa1423320 AT5G38970.1 22.222 252 168 5 229 474 209 438 1.07e-15 80.1
Msa1423320 AT4G39480.1 25.969 258 163 7 240 479 242 489 1.61e-15 79.7
Msa1423320 AT2G29090.3 29.442 197 124 2 284 476 176 361 2.57e-15 78.2
Msa1423320 AT1G12740.1 23.414 457 293 15 32 474 30 443 2.81e-15 78.6
Msa1423320 AT1G34540.1 24.516 465 288 19 40 472 33 466 3.14e-15 78.6
Msa1423320 AT2G32440.2 24.516 465 287 18 19 465 32 450 3.17e-15 78.6
Msa1423320 AT2G32440.1 24.516 465 287 18 19 465 32 450 3.17e-15 78.6
Msa1423320 AT3G44970.1 22.907 454 299 15 32 473 34 448 3.79e-15 78.2
Msa1423320 AT5G23190.1 23.690 477 310 18 36 479 61 516 4.40e-15 78.6
Msa1423320 AT4G39500.2 24.533 375 248 14 126 480 134 493 4.54e-15 78.2
Msa1423320 AT1G65670.1 23.918 439 276 18 32 459 34 425 5.37e-15 77.8
Msa1423320 AT4G39500.1 25.532 376 243 16 126 480 84 443 6.95e-15 77.4
Msa1423320 AT1G12740.2 23.011 465 291 16 32 474 30 449 8.71e-15 77.0
Msa1423320 AT5G58860.1 22.078 462 313 14 36 469 32 474 1.63e-14 76.6
Msa1423320 AT4G36380.1 26.360 239 149 6 249 478 270 490 1.69e-14 76.6
Msa1423320 AT5G08250.2 22.312 493 306 20 36 485 62 520 3.46e-14 75.5
Msa1423320 AT1G78490.2 23.171 410 256 11 32 421 34 404 3.52e-14 75.1
Msa1423320 AT5G08250.1 22.131 488 304 19 41 485 4 458 3.52e-14 75.5
Msa1423320 AT3G30180.1 23.214 280 187 7 229 504 209 464 4.88e-14 74.7
Msa1423320 AT1G55940.2 21.987 473 307 17 32 484 44 474 7.80e-14 74.3
Msa1423320 AT3G50660.1 27.083 192 133 2 290 474 294 485 9.60e-14 73.9
Msa1423320 AT3G13730.1 27.962 211 132 4 272 478 275 469 1.33e-13 73.6
Msa1423320 AT5G38450.1 29.747 158 101 4 326 482 347 495 2.02e-13 73.2
Msa1423320 AT2G45970.1 22.379 496 331 19 2 469 7 476 2.18e-13 73.2
Msa1423320 AT1G55940.1 21.909 461 299 16 32 472 44 463 2.85e-13 72.4
Msa1423320 AT4G27710.1 21.789 436 294 13 63 482 92 496 3.14e-13 72.4
Msa1423320 AT2G27690.1 22.876 459 288 17 46 473 38 461 3.77e-13 72.0
Msa1423320 AT2G42850.1 30.216 139 86 2 336 474 328 455 5.05e-13 71.6
Msa1423320 AT3G14660.2 25.159 314 204 13 177 482 55 345 1.12e-12 70.1
Msa1423320 AT3G14650.1 23.392 342 233 11 148 482 172 491 1.59e-12 70.1
Msa1423320 AT3G14680.1 23.794 311 212 12 177 482 201 491 1.71e-12 70.1
Msa1423320 AT2G46960.1 23.504 234 165 4 243 475 152 372 2.00e-12 69.3
Msa1423320 AT2G46960.2 23.504 234 165 4 243 475 268 488 2.07e-12 69.7
Msa1423320 AT3G14660.1 25.159 314 204 13 177 482 201 491 2.87e-12 69.3
Msa1423320 AT5G36110.1 25.735 272 174 6 208 474 199 447 2.92e-12 69.3
Msa1423320 AT1G11680.1 25.980 204 140 5 276 473 257 455 2.94e-12 69.3
Msa1423320 AT3G14690.2 24.127 315 206 13 177 482 236 526 3.59e-12 69.3
Msa1423320 AT3G14690.1 24.127 315 206 13 177 482 201 491 4.05e-12 68.9
Msa1423320 AT2G28850.1 25.352 355 222 14 164 504 168 493 1.04e-11 67.8
Msa1423320 AT5G05690.2 27.815 151 102 2 276 423 251 397 1.17e-11 67.0
Msa1423320 AT1G67110.1 25.316 158 108 2 326 482 341 489 1.23e-11 67.4
Msa1423320 AT3G01900.1 22.062 417 281 14 73 473 72 460 1.45e-11 67.0
Msa1423320 AT2G34490.1 24.719 356 225 14 177 504 157 497 3.19e-11 66.2
Msa1423320 AT2G46950.1 24.017 229 165 4 245 472 319 539 3.36e-11 66.2
Msa1423320 AT1G58265.1 30.841 107 72 1 394 500 13 117 4.16e-11 62.0
Msa1423320 AT5G14400.3 24.719 267 155 10 218 475 161 390 5.74e-11 64.7
Msa1423320 AT2G28860.1 24.432 352 227 14 165 504 169 493 8.95e-11 64.7

Find 118 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGCCTGTTCCACATTTA+AGG 0.123967 tig0025528:-14443 Msa1423320:CDS
TGTTCCACATTTAAGGAATT+TGG 0.130973 tig0025528:-14436 Msa1423320:CDS
TCACTTTGTAAGAATCTTTC+AGG 0.150563 tig0025528:+14696 None:intergenic
AGAAAAGTTGTTAGGGAAAT+TGG 0.156754 tig0025528:-17224 Msa1423320:CDS
TTTAATTTAGGTGATATTAT+TGG 0.178766 tig0025528:-17185 Msa1423320:CDS
ACGTAGTATTATTTCTATTA+TGG 0.189133 tig0025528:-17817 Msa1423320:CDS
TCATACCTTATGGAAATTAT+TGG 0.214034 tig0025528:-17481 Msa1423320:CDS
GCTTGAAGATAAGGTAAATT+TGG 0.236561 tig0025528:+14891 None:intergenic
CCAATTTCATTTCCAATCTT+AGG 0.252882 tig0025528:-17725 Msa1423320:CDS
CCAAGCATAATATGCATTAA+AGG 0.254558 tig0025528:+17638 None:intergenic
CCTTTAGATCTACAAGGATT+TGG 0.264691 tig0025528:-17152 Msa1423320:CDS
CATCATTTCTAGAATGACTA+TGG 0.268372 tig0025528:-17288 Msa1423320:CDS
TTAAGGTGTATAGTTGAAAA+AGG 0.271496 tig0025528:+14085 None:intergenic
AAATGAGGCATGAACTTATT+AGG 0.281825 tig0025528:-17322 Msa1423320:CDS
TTAATTTAGGTGATATTATT+GGG 0.300078 tig0025528:-17184 Msa1423320:CDS
GGTAATTGGTGTGACTAAAA+AGG 0.311721 tig0025528:+17876 None:intergenic
GTAGCTTCTCTAGCAAATAT+TGG 0.314464 tig0025528:+14831 None:intergenic
ATTAAAAGACAGAGAAGAAT+TGG 0.318142 tig0025528:+14268 None:intergenic
TGAGTATTTGAGTTGGTAAT+TGG 0.324446 tig0025528:+17862 None:intergenic
GTCAATTGAGAAAAGTTGTT+AGG 0.324528 tig0025528:-17232 Msa1423320:CDS
TACAAACTTTCAAATCGTTA+TGG 0.325684 tig0025528:-17662 Msa1423320:CDS
CTCTAGCAAATATTGGAGTT+GGG 0.340950 tig0025528:+14838 None:intergenic
TAACAAGTGTTCACTCTTCT+CGG 0.341102 tig0025528:-14209 Msa1423320:three_prime_UTR
AATACCAAACTCAAATATAA+TGG 0.346339 tig0025528:+17917 None:intergenic
GTTTGATACAATGCTTTGAT+TGG 0.348484 tig0025528:-14548 Msa1423320:CDS
CCTAAGATTGGAAATGAAAT+TGG 0.351796 tig0025528:+17725 None:intergenic
CTTTAGATCTACAAGGATTT+GGG 0.352476 tig0025528:-17151 Msa1423320:CDS
AGTGGATTGTCCCAATAGTT+AGG 0.361549 tig0025528:+14729 None:intergenic
TTCATCAATGCATGGGCTAT+TGG 0.361830 tig0025528:-14759 Msa1423320:CDS
GAAGAGATTGACTCTATTGT+TGG 0.364313 tig0025528:-14945 Msa1423320:CDS
TCTTGATTTGAAAAGTGAAA+TGG 0.366540 tig0025528:+14115 None:intergenic
GCCCATTCTAACACACTTGC+TGG 0.377184 tig0025528:+15014 None:intergenic
AGTTCCATTATATTTGAGTT+TGG 0.378623 tig0025528:-17921 Msa1423320:five_prime_UTR
AGCAATCATAATAGGTCTAT+TGG 0.382828 tig0025528:+17541 None:intergenic
TTAACTACTGCTTGAAGATA+AGG 0.388116 tig0025528:+14882 None:intergenic
GTGATATTATTGGGTTTATG+AGG 0.393336 tig0025528:-17175 Msa1423320:CDS
TGAATTTGATTCTTCTTCAC+TGG 0.399183 tig0025528:+14400 None:intergenic
AAATTCCTTAAATGTGGAAC+AGG 0.406285 tig0025528:+14438 None:intergenic
AGGGAAATTGGTGAACTTCT+TGG 0.412764 tig0025528:-17212 Msa1423320:CDS
CCATGCATTGATGAAAATCT+TGG 0.417133 tig0025528:+14767 None:intergenic
TTACAAATAGATCACTTAAA+CGG 0.417533 tig0025528:+14164 None:intergenic
AGTTCATGCCTCATTTCAAT+TGG 0.422977 tig0025528:+17329 None:intergenic
ATGTTCATTGCAGGAACAAA+TGG 0.423179 tig0025528:-15038 Msa1423320:CDS
TCTCTAGCAAATATTGGAGT+TGG 0.424519 tig0025528:+14837 None:intergenic
CAACAGGACATGTTCATTGC+AGG 0.427056 tig0025528:-15047 Msa1423320:intron
ACTCTATTGTTGGCAAAGAA+AGG 0.431589 tig0025528:-14935 Msa1423320:CDS
ACAAGAAGTTGTCAAGTTGA+TGG 0.432711 tig0025528:-14810 Msa1423320:CDS
TTGGTAGAGACCCTAACTAT+TGG 0.434136 tig0025528:-14740 Msa1423320:CDS
CAGTCATACAAAGCTTCTTA+AGG 0.436267 tig0025528:+17453 None:intergenic
TCAATTGAGAAAAGTTGTTA+GGG 0.438122 tig0025528:-17231 Msa1423320:CDS
TTCTCACTAGCAATCATAAT+AGG 0.439455 tig0025528:+17533 None:intergenic
GACCAGCAAGTGTGTTAGAA+TGG 0.442776 tig0025528:-15016 Msa1423320:CDS
TGGTAGAGACCCTAACTATT+GGG 0.444351 tig0025528:-14739 Msa1423320:CDS
CCTTTAATGCATATTATGCT+TGG 0.444595 tig0025528:-17638 Msa1423320:CDS
GGAACAGGCTTGCACTTCAA+TGG 0.445115 tig0025528:+14453 None:intergenic
AAGAAGGTGCTGGTAGTGAT+AGG 0.447091 tig0025528:-17049 Msa1423320:CDS
ATCTAAATCTTGAACTATGA+TGG 0.448423 tig0025528:+17965 None:intergenic
GCTAGTGAGAATTTAACATA+TGG 0.449747 tig0025528:-17521 Msa1423320:CDS
CCAAATCCTTGTAGATCTAA+AGG 0.455882 tig0025528:+17152 None:intergenic
TATGGTGCATGTCCTAAGAT+TGG 0.455894 tig0025528:+17713 None:intergenic
TTTAAGGAATTTGGATGGAA+TGG 0.457055 tig0025528:-14427 Msa1423320:CDS
ATCTACAAGGATTTGGGAAG+AGG 0.457469 tig0025528:-17145 Msa1423320:CDS
ATGAAAATCTTGGAAAATGC+TGG 0.458948 tig0025528:+14777 None:intergenic
TGAAGAAGTGATCTAAGATA+TGG 0.460096 tig0025528:+17695 None:intergenic
TTATCTTCAAGCAGTAGTTA+AGG 0.465803 tig0025528:-14880 Msa1423320:CDS
GCAAGAGTAAGATTGATGTA+AGG 0.466778 tig0025528:-14665 Msa1423320:CDS
AATGATGGAGAAAGTGTTGA+AGG 0.466848 tig0025528:-17093 Msa1423320:CDS
CTTGCTTTCTTGAAAACATG+TGG 0.471084 tig0025528:+14969 None:intergenic
TGTATGACTGAGCTTCTTAG+TGG 0.488421 tig0025528:-17440 Msa1423320:CDS
TACCTTATGGAAATTATTGG+AGG 0.492690 tig0025528:-17478 Msa1423320:CDS
AAGTGTATGTGAAAACTTCA+TGG 0.492743 tig0025528:-14318 Msa1423320:three_prime_UTR
AACTTGATTGAAGCTGATGA+TGG 0.494391 tig0025528:-16999 Msa1423320:CDS
TAGATTCATCTTAAGCATAG+AGG 0.495059 tig0025528:-17947 Msa1423320:five_prime_UTR
TTTGATTGGGTTGTTAATGA+TGG 0.497482 tig0025528:-14534 Msa1423320:CDS
CACTTTGTAAGAATCTTTCA+GGG 0.503289 tig0025528:+14697 None:intergenic
AACCTCCAATAATTTCCATA+AGG 0.504527 tig0025528:+17476 None:intergenic
CAAGAGTAAGATTGATGTAA+GGG 0.510655 tig0025528:-14664 Msa1423320:CDS
CTTCTTCTCCCACTACCAAA+TGG 0.510748 tig0025528:+14621 None:intergenic
TTTGATACAATGCTTTGATT+GGG 0.510930 tig0025528:-14547 Msa1423320:CDS
TTGATATGTCTGAAGTAGGA+AGG 0.511280 tig0025528:-14497 Msa1423320:CDS
GTGGATTGTCCCAATAGTTA+GGG 0.511310 tig0025528:+14730 None:intergenic
GAAATAATACTACGTAGCCT+TGG 0.513212 tig0025528:+17825 None:intergenic
CCATCCAAATTCCTTAAATG+TGG 0.515469 tig0025528:+14432 None:intergenic
CTTTCAGGGTTAAAGACTAG+TGG 0.515874 tig0025528:+14711 None:intergenic
TCAAACTTGCAAGTGTTGCT+TGG 0.517020 tig0025528:+14565 None:intergenic
ACCAGCAAGTGTGTTAGAAT+GGG 0.522260 tig0025528:-15015 Msa1423320:CDS
GTATGTGAAAACTTCATGGC+AGG 0.523763 tig0025528:-14314 Msa1423320:three_prime_UTR
GATATTGATATGTCTGAAGT+AGG 0.525115 tig0025528:-14501 Msa1423320:CDS
GTAGCCTTGGATTTCAAGCA+TGG 0.527572 tig0025528:+17838 None:intergenic
CAAAGATACACATCATAAGA+TGG 0.530706 tig0025528:-17120 Msa1423320:CDS
TCATAAGATGGATTTAATGA+TGG 0.535295 tig0025528:-17108 Msa1423320:CDS
GGAAATGAAATTGGTGGTCC+AGG 0.538379 tig0025528:+17734 None:intergenic
TCTAGCAAATATTGGAGTTG+GGG 0.540518 tig0025528:+14839 None:intergenic
ACATCAATCTTACTCTTGCT+AGG 0.541980 tig0025528:+14669 None:intergenic
ATGAGGCCTTTAGATCTACA+AGG 0.550635 tig0025528:-17158 Msa1423320:CDS
CCACATTTAAGGAATTTGGA+TGG 0.557068 tig0025528:-14432 Msa1423320:CDS
ATCATTTCTAGAATGACTAT+GGG 0.558323 tig0025528:-17287 Msa1423320:CDS
ATGGTAAACCAATTGAAATG+AGG 0.558847 tig0025528:-17337 Msa1423320:CDS
AAGATTGGAAATGAAATTGG+TGG 0.560938 tig0025528:+17728 None:intergenic
AAGGAATTTGGATGGAATGG+TGG 0.565579 tig0025528:-14424 Msa1423320:CDS
AGCAAAGCAAGTGAAGAACC+AGG 0.568709 tig0025528:+14594 None:intergenic
TGCTGGTAGTGATAGGAAGA+AGG 0.570473 tig0025528:-17042 Msa1423320:CDS
GCTAGAGCTAAAGAAGGTGC+TGG 0.574010 tig0025528:-17059 Msa1423320:CDS
AGTGGGAGAAGAAGTTGCCC+TGG 0.576685 tig0025528:-14612 Msa1423320:CDS
GCATGGTTGAGTATTTGAGT+TGG 0.580993 tig0025528:+17855 None:intergenic
CTAGCAAATATTGGAGTTGG+GGG 0.586611 tig0025528:+14840 None:intergenic
GAAGAAGCTAGAGCTAAAGA+AGG 0.587593 tig0025528:-17065 Msa1423320:CDS
GGTGGGATGAATGATGAAGT+TGG 0.588510 tig0025528:-17254 Msa1423320:CDS
AAATAGATCACTTAAACGGA+TGG 0.588975 tig0025528:+14168 None:intergenic
GTATGACTGAGCTTCTTAGT+GGG 0.590586 tig0025528:-17439 Msa1423320:CDS
TGATATGTCTGAAGTAGGAA+GGG 0.594846 tig0025528:-14496 Msa1423320:CDS
TCAACCATGCTTGAAATCCA+AGG 0.604280 tig0025528:-17842 Msa1423320:exon
AGGTGGTAATTTGTAACACA+CGG 0.638216 tig0025528:+17754 None:intergenic
GTGTGTTACAAATTACCACC+TGG 0.643051 tig0025528:-17752 Msa1423320:CDS
AAGAGTAAGATTGATGTAAG+GGG 0.649488 tig0025528:-14663 Msa1423320:CDS
GCAAAGCAAGTGAAGAACCA+GGG 0.660635 tig0025528:+14595 None:intergenic
TAGCAAATATTGGAGTTGGG+GGG 0.700370 tig0025528:+14841 None:intergenic
AATGAAATTGGTGGTCCAGG+TGG 0.733213 tig0025528:+17737 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATATATTTTATATAA+TGG - tig0025528:16935-16954 Msa1423320:intron 0.0%
!! ATTGTTTAAAGAATTAAAAA+AGG - tig0025528:15468-15487 Msa1423320:intron 10.0%
!! AAATGATATATTTATTACTT+TGG - tig0025528:15506-15525 Msa1423320:intron 10.0%
!!! ATTTTTAGATATTTCCAAAA+GGG + tig0025528:14744-14763 None:intergenic 15.0%
!!! TTTAATTTAGGTGATATTAT+TGG - tig0025528:14914-14933 Msa1423320:CDS 15.0%
!! TTAATTTAGGTGATATTATT+GGG - tig0025528:14915-14934 Msa1423320:CDS 15.0%
!!! TTTTTACTATTTCATTCATT+TGG - tig0025528:15228-15247 Msa1423320:intron 15.0%
!! ATCTTATAACATTGTTAAAT+AGG - tig0025528:15286-15305 Msa1423320:intron 15.0%
!!! TGTTTTTTTTTTTTTTTGTG+TGG - tig0025528:16082-16101 Msa1423320:intron 15.0%
!!! GTTTTTTTTTTTTTTTGTGT+GGG - tig0025528:16083-16102 Msa1423320:intron 15.0%
!!! TTTTTTTTTTTTTTTGTGTG+GGG - tig0025528:16084-16103 Msa1423320:intron 15.0%
!! ATTAAAAAATGCAATGATTA+AGG - tig0025528:16257-16276 Msa1423320:intron 15.0%
!! TTAAAAAATGCAATGATTAA+GGG - tig0025528:16258-16277 Msa1423320:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG + tig0025528:16303-16322 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - tig0025528:16302-16321 Msa1423320:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - tig0025528:16326-16345 Msa1423320:intron 15.0%
!! AATTAACCCTATAAAATATT+AGG + tig0025528:16613-16632 None:intergenic 15.0%
!!! TTTATTGTGTTTTTATGTTA+TGG - tig0025528:17756-17775 Msa1423320:CDS 15.0%
!!! TTATTGTGTTTTTATGTTAT+GGG - tig0025528:17757-17776 Msa1423320:CDS 15.0%
!! AATACCAAACTCAAATATAA+TGG + tig0025528:14185-14204 None:intergenic 20.0%
!!! ACGTAGTATTATTTCTATTA+TGG - tig0025528:14282-14301 Msa1423320:three_prime_UTR 20.0%
!!! TCATTTCAACTATTTTCATT+AGG - tig0025528:14306-14325 Msa1423320:three_prime_UTR 20.0%
!!! GATTATTTTTTCATACCTTA+TGG - tig0025528:14608-14627 Msa1423320:CDS 20.0%
!!! AGATGAAATTAAGTGTTTTA+TGG - tig0025528:14715-14734 Msa1423320:CDS 20.0%
!!! GATGAAATTAAGTGTTTTAT+GGG - tig0025528:14716-14735 Msa1423320:CDS 20.0%
!!! ATGAAATTAAGTGTTTTATG+GGG - tig0025528:14717-14736 Msa1423320:CDS 20.0%
!!! CATTTTTAGATATTTCCAAA+AGG + tig0025528:14745-14764 None:intergenic 20.0%
!!! CTTTTGGAAATATCTAAAAA+TGG - tig0025528:14743-14762 Msa1423320:CDS 20.0%
!! GAAAGCTATCATATAATTAA+AGG + tig0025528:15340-15359 None:intergenic 20.0%
!! TAATTATATGATAGCTTTCA+AGG - tig0025528:15341-15360 Msa1423320:intron 20.0%
!! TATAAATCTTTCGAAATATG+AGG - tig0025528:15374-15393 Msa1423320:intron 20.0%
!! TGTTATGTTACTAATTACAT+AGG + tig0025528:15408-15427 None:intergenic 20.0%
!!! ATAACATCAATCAGTTTTTT+AGG - tig0025528:15422-15441 Msa1423320:intron 20.0%
!! ATCTTGTACAATACTAAATA+TGG - tig0025528:15604-15623 Msa1423320:intron 20.0%
!!! TTTTACCAAAAATATGATCT+CGG - tig0025528:15738-15757 Msa1423320:intron 20.0%
!!! TCATTTCTCTTTTATCAATT+AGG + tig0025528:15863-15882 None:intergenic 20.0%
!! AAAAAAAAAAAACACCTGAA+TGG + tig0025528:16076-16095 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + tig0025528:16312-16331 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - tig0025528:16389-16408 Msa1423320:intron 20.0%
!!! TTATATTTAATTGGCTTTGT+AGG - tig0025528:16486-16505 Msa1423320:intron 20.0%
!! GCAAAAATATTTCTCTATAT+AGG - tig0025528:16587-16606 Msa1423320:intron 20.0%
!!! ATATAGGCCTAATATTTTAT+AGG - tig0025528:16603-16622 Msa1423320:intron 20.0%
!!! TATAGGCCTAATATTTTATA+GGG - tig0025528:16604-16623 Msa1423320:intron 20.0%
!! TATAGGGTTAATTAAGTAAA+TGG - tig0025528:16620-16639 Msa1423320:intron 20.0%
!!! GTTGATGGAAAAATTTTATA+GGG + tig0025528:16738-16757 None:intergenic 20.0%
!!! TGTTGATGGAAAAATTTTAT+AGG + tig0025528:16739-16758 None:intergenic 20.0%
!!! AAAAATTTCCATCAACATTT+TGG - tig0025528:16774-16793 Msa1423320:intron 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG - tig0025528:16834-16853 Msa1423320:intron 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG - tig0025528:16835-16854 Msa1423320:intron 20.0%
!! ACAAAACTGTGAATATTTAT+AGG - tig0025528:16865-16884 Msa1423320:intron 20.0%
!! CAAAACTGTGAATATTTATA+GGG - tig0025528:16866-16885 Msa1423320:intron 20.0%
!! ATGGTTCATTATTATAGTAA+AGG - tig0025528:16954-16973 Msa1423320:CDS 20.0%
!!! TATTGTGTTTTTATGTTATG+GGG - tig0025528:17758-17777 Msa1423320:CDS 20.0%
!! TTACAAATAGATCACTTAAA+CGG + tig0025528:17938-17957 None:intergenic 20.0%
! ATCTAAATCTTGAACTATGA+TGG + tig0025528:14137-14156 None:intergenic 25.0%
!! AGTTCCATTATATTTGAGTT+TGG - tig0025528:14178-14197 Msa1423320:three_prime_UTR 25.0%
! TACAAACTTTCAAATCGTTA+TGG - tig0025528:14437-14456 Msa1423320:CDS 25.0%
! TCATACCTTATGGAAATTAT+TGG - tig0025528:14618-14637 Msa1423320:CDS 25.0%
!!! ATCATTTCTAGAATGACTAT+GGG - tig0025528:14812-14831 Msa1423320:CDS 25.0%
! TCAATTGAGAAAAGTTGTTA+GGG - tig0025528:14868-14887 Msa1423320:CDS 25.0%
!! TCATAAGATGGATTTAATGA+TGG - tig0025528:14991-15010 Msa1423320:CDS 25.0%
!!! TTTTAGGAAAATAACAACTG+AGG - tig0025528:15438-15457 Msa1423320:intron 25.0%
! CATGTTAGTAAATCCATAAT+GGG + tig0025528:15564-15583 None:intergenic 25.0%
! TCATGTTAGTAAATCCATAA+TGG + tig0025528:15565-15584 None:intergenic 25.0%
! ACAATACTAAATATGGACTT+TGG - tig0025528:15611-15630 Msa1423320:intron 25.0%
! AAATCCAAATTGTTTGTAGA+TGG - tig0025528:15818-15837 Msa1423320:intron 25.0%
! ATTACCATCTACAAACAATT+TGG + tig0025528:15825-15844 None:intergenic 25.0%
!! TTCTCTTTTATCAATTAGGT+AGG + tig0025528:15859-15878 None:intergenic 25.0%
! GTCTAAAAGTTGTCAAAAAA+TGG + tig0025528:15897-15916 None:intergenic 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + tig0025528:15977-15996 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + tig0025528:15990-16009 None:intergenic 25.0%
!!! ATGATATTTTGACATCCATT+TGG + tig0025528:16033-16052 None:intergenic 25.0%
! TGATAAAATTAACACCATTC+AGG - tig0025528:16059-16078 Msa1423320:intron 25.0%
!! AGTTGATACAAATTTGTGTA+TGG + tig0025528:16111-16130 None:intergenic 25.0%
! TACACAAATTTGTATCAACT+TGG - tig0025528:16111-16130 Msa1423320:intron 25.0%
!!! GAGGGAGTATTATATTTAAT+TGG - tig0025528:16477-16496 Msa1423320:intron 25.0%
!!! AAAATGCTTGGTTACTTTTT+TGG + tig0025528:16537-16556 None:intergenic 25.0%
!! GTGCAACTCAATTTTTATTA+AGG - tig0025528:16565-16584 Msa1423320:intron 25.0%
!! TGCTGATGGAAAATTTTATA+TGG + tig0025528:16707-16726 None:intergenic 25.0%
!! AAATTTTCCATCAGCATTTT+TGG - tig0025528:16711-16730 Msa1423320:intron 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG + tig0025528:16801-16820 None:intergenic 25.0%
! ATTATCCCTACTTTGTATAA+TGG - tig0025528:16901-16920 Msa1423320:intron 25.0%
! CAAAACCATTATACAAAGTA+GGG + tig0025528:16909-16928 None:intergenic 25.0%
!! TATTATCAACTTTTGCCATT+TGG - tig0025528:17463-17482 Msa1423320:CDS 25.0%
! TTTGATACAATGCTTTGATT+GGG - tig0025528:17552-17571 Msa1423320:CDS 25.0%
! CAGGATAAAAATAAGTGATT+AGG - tig0025528:17804-17823 Msa1423320:CDS 25.0%
! ATTAAAAGACAGAGAAGAAT+TGG + tig0025528:17834-17853 None:intergenic 25.0%
! GTTGGCACAAAAAAATTTAA+TGG - tig0025528:17854-17873 Msa1423320:exon 25.0%
!! TGAAATGGATCATTCATTTT+AGG + tig0025528:17972-17991 None:intergenic 25.0%
!! TCTTGATTTGAAAAGTGAAA+TGG + tig0025528:17987-18006 None:intergenic 25.0%
TAGATTCATCTTAAGCATAG+AGG - tig0025528:14152-14171 Msa1423320:three_prime_UTR 30.0%
!! TGAGTATTTGAGTTGGTAAT+TGG + tig0025528:14240-14259 None:intergenic 30.0%
AAGATTGGAAATGAAATTGG+TGG + tig0025528:14374-14393 None:intergenic 30.0%
CCTAAGATTGGAAATGAAAT+TGG + tig0025528:14377-14396 None:intergenic 30.0%
CCAATTTCATTTCCAATCTT+AGG - tig0025528:14374-14393 Msa1423320:three_prime_UTR 30.0%
! TGAAGAAGTGATCTAAGATA+TGG + tig0025528:14407-14426 None:intergenic 30.0%
CCAAGCATAATATGCATTAA+AGG + tig0025528:14464-14483 None:intergenic 30.0%
CCTTTAATGCATATTATGCT+TGG - tig0025528:14461-14480 Msa1423320:CDS 30.0%
AGCAATCATAATAGGTCTAT+TGG + tig0025528:14561-14580 None:intergenic 30.0%
TTCTCACTAGCAATCATAAT+AGG + tig0025528:14569-14588 None:intergenic 30.0%
GCTAGTGAGAATTTAACATA+TGG - tig0025528:14578-14597 Msa1423320:CDS 30.0%
TACCTTATGGAAATTATTGG+AGG - tig0025528:14621-14640 Msa1423320:CDS 30.0%
AACCTCCAATAATTTCCATA+AGG + tig0025528:14626-14645 None:intergenic 30.0%
ATGGTAAACCAATTGAAATG+AGG - tig0025528:14762-14781 Msa1423320:CDS 30.0%
AAATGAGGCATGAACTTATT+AGG - tig0025528:14777-14796 Msa1423320:CDS 30.0%
!! CATCATTTCTAGAATGACTA+TGG - tig0025528:14811-14830 Msa1423320:CDS 30.0%
GTCAATTGAGAAAAGTTGTT+AGG - tig0025528:14867-14886 Msa1423320:CDS 30.0%
AGAAAAGTTGTTAGGGAAAT+TGG - tig0025528:14875-14894 Msa1423320:CDS 30.0%
!!! CTTCTTGGTGCTTTTAATTT+AGG - tig0025528:14902-14921 Msa1423320:CDS 30.0%
GTGATATTATTGGGTTTATG+AGG - tig0025528:14924-14943 Msa1423320:CDS 30.0%
CTTTAGATCTACAAGGATTT+GGG - tig0025528:14948-14967 Msa1423320:CDS 30.0%
CAAAGATACACATCATAAGA+TGG - tig0025528:14979-14998 Msa1423320:CDS 30.0%
!!! ATGGGAATTCTGTTTTAGAA+AGG + tig0025528:15546-15565 None:intergenic 30.0%
CTAAAACAGAATTCCCATTA+TGG - tig0025528:15548-15567 Msa1423320:intron 30.0%
ACTAAATATGGACTTTGGAT+TGG - tig0025528:15616-15635 Msa1423320:intron 30.0%
CTAAATATGGACTTTGGATT+GGG - tig0025528:15617-15636 Msa1423320:intron 30.0%
ACCATTCGATCTTAAATCAA+CGG + tig0025528:15701-15720 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + tig0025528:15964-15983 None:intergenic 30.0%
TTGTATCAACTTGGTATCAA+TGG - tig0025528:16120-16139 Msa1423320:intron 30.0%
!! TTAATTGGCTTTGTAGGTAT+TGG - tig0025528:16492-16511 Msa1423320:intron 30.0%
!! GTTGATGGAAATTTTTGACA+GGG + tig0025528:16770-16789 None:intergenic 30.0%
!! TGTTGATGGAAATTTTTGAC+AGG + tig0025528:16771-16790 None:intergenic 30.0%
! GCATTTTCCTTAAGCATTTT+AGG + tig0025528:16802-16821 None:intergenic 30.0%
CCAAAACCATTATACAAAGT+AGG + tig0025528:16910-16929 None:intergenic 30.0%
! CCTACTTTGTATAATGGTTT+TGG - tig0025528:16907-16926 Msa1423320:intron 30.0%
GCTTGAAGATAAGGTAAATT+TGG + tig0025528:17211-17230 None:intergenic 30.0%
TTAACTACTGCTTGAAGATA+AGG + tig0025528:17220-17239 None:intergenic 30.0%
TTATCTTCAAGCAGTAGTTA+AGG - tig0025528:17219-17238 Msa1423320:CDS 30.0%
ATGAAAATCTTGGAAAATGC+TGG + tig0025528:17325-17344 None:intergenic 30.0%
! CAAGATTTTCATCAATGCAT+GGG - tig0025528:17333-17352 Msa1423320:CDS 30.0%
CACTTTGTAAGAATCTTTCA+GGG + tig0025528:17405-17424 None:intergenic 30.0%
TCACTTTGTAAGAATCTTTC+AGG + tig0025528:17406-17425 None:intergenic 30.0%
CAAGAGTAAGATTGATGTAA+GGG - tig0025528:17435-17454 Msa1423320:CDS 30.0%
AAGAGTAAGATTGATGTAAG+GGG - tig0025528:17436-17455 Msa1423320:CDS 30.0%
GTTTGATACAATGCTTTGAT+TGG - tig0025528:17551-17570 Msa1423320:CDS 30.0%
! TTTGATTGGGTTGTTAATGA+TGG - tig0025528:17565-17584 Msa1423320:CDS 30.0%
! GATATTGATATGTCTGAAGT+AGG - tig0025528:17598-17617 Msa1423320:CDS 30.0%
AAATTCCTTAAATGTGGAAC+AGG + tig0025528:17664-17683 None:intergenic 30.0%
TGTTCCACATTTAAGGAATT+TGG - tig0025528:17663-17682 Msa1423320:CDS 30.0%
TTTAAGGAATTTGGATGGAA+TGG - tig0025528:17672-17691 Msa1423320:CDS 30.0%
TGAATTTGATTCTTCTTCAC+TGG + tig0025528:17702-17721 None:intergenic 30.0%
AAGTGTATGTGAAAACTTCA+TGG - tig0025528:17781-17800 Msa1423320:CDS 30.0%
! TCTTCTCTGTCTTTTAATGT+TGG - tig0025528:17836-17855 Msa1423320:CDS 30.0%
AAATAGATCACTTAAACGGA+TGG + tig0025528:17934-17953 None:intergenic 30.0%
GGTAATTGGTGTGACTAAAA+AGG + tig0025528:14226-14245 None:intergenic 35.0%
GAAATAATACTACGTAGCCT+TGG + tig0025528:14277-14296 None:intergenic 35.0%
! AGGTGGTAATTTGTAACACA+CGG + tig0025528:14348-14367 None:intergenic 35.0%
CAGTCATACAAAGCTTCTTA+AGG + tig0025528:14649-14668 None:intergenic 35.0%
AGTTCATGCCTCATTTCAAT+TGG + tig0025528:14773-14792 None:intergenic 35.0%
ATGACTATGGGAAAAAAGAG+TGG - tig0025528:14824-14843 Msa1423320:CDS 35.0%
CCAAATCCTTGTAGATCTAA+AGG + tig0025528:14950-14969 None:intergenic 35.0%
CCTTTAGATCTACAAGGATT+TGG - tig0025528:14947-14966 Msa1423320:CDS 35.0%
!! AATGATGGAGAAAGTGTTGA+AGG - tig0025528:15006-15025 Msa1423320:CDS 35.0%
AACTTGATTGAAGCTGATGA+TGG - tig0025528:15100-15119 Msa1423320:intron 35.0%
TTTCGAAATATGAGGTAGCA+TGG - tig0025528:15382-15401 Msa1423320:intron 35.0%
ATGAAAACACTTAACAGCAG+CGG + tig0025528:15651-15670 None:intergenic 35.0%
! TGCTGTTAAGTGTTTTCATG+CGG - tig0025528:15652-15671 Msa1423320:intron 35.0%
!! ACCGTTGATTTAAGATCGAA+TGG - tig0025528:15697-15716 Msa1423320:intron 35.0%
TCAACAAAGTTGTCACCAAA+TGG - tig0025528:16015-16034 Msa1423320:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + tig0025528:16419-16438 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG - tig0025528:16221-16240 Msa1423320:intron 35.0%
GTAGTGTGCATGGTATTAAT+TGG - tig0025528:16351-16370 Msa1423320:intron 35.0%
TGTGCATGGTATTAATTGGA+GGG - tig0025528:16355-16374 Msa1423320:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - tig0025528:16419-16438 Msa1423320:intron 35.0%
! GCACATTAGTCTAAAATGCT+TGG + tig0025528:16549-16568 None:intergenic 35.0%
ACAGGGACTAAAAATGTTGA+TGG + tig0025528:16753-16772 None:intergenic 35.0%
TTTAGGGACCAAAATGTTGA+TGG + tig0025528:16785-16804 None:intergenic 35.0%
TTTGGTCCCTAAAATGCTTA+AGG - tig0025528:16792-16811 Msa1423320:intron 35.0%
!! ATCACACTTTTTAGTCTCTG+TGG + tig0025528:16824-16843 None:intergenic 35.0%
GCTTAATGTGTTTGTTCAAC+AGG - tig0025528:17036-17055 Msa1423320:CDS 35.0%
ATGTTCATTGCAGGAACAAA+TGG - tig0025528:17061-17080 Msa1423320:CDS 35.0%
CTTGCTTTCTTGAAAACATG+TGG + tig0025528:17133-17152 None:intergenic 35.0%
! GAAGAGATTGACTCTATTGT+TGG - tig0025528:17154-17173 Msa1423320:CDS 35.0%
ACTCTATTGTTGGCAAAGAA+AGG - tig0025528:17164-17183 Msa1423320:CDS 35.0%
TCTAGCAAATATTGGAGTTG+GGG + tig0025528:17263-17282 None:intergenic 35.0%
CTCTAGCAAATATTGGAGTT+GGG + tig0025528:17264-17283 None:intergenic 35.0%
TCTCTAGCAAATATTGGAGT+TGG + tig0025528:17265-17284 None:intergenic 35.0%
GTAGCTTCTCTAGCAAATAT+TGG + tig0025528:17271-17290 None:intergenic 35.0%
!! ACAAGAAGTTGTCAAGTTGA+TGG - tig0025528:17289-17308 Msa1423320:CDS 35.0%
! CCATGCATTGATGAAAATCT+TGG + tig0025528:17335-17354 None:intergenic 35.0%
! CCAAGATTTTCATCAATGCA+TGG - tig0025528:17332-17351 Msa1423320:CDS 35.0%
ACATCAATCTTACTCTTGCT+AGG + tig0025528:17433-17452 None:intergenic 35.0%
GCAAGAGTAAGATTGATGTA+AGG - tig0025528:17434-17453 Msa1423320:CDS 35.0%
!! AACTTTTGCCATTTGGTAGT+GGG - tig0025528:17470-17489 Msa1423320:CDS 35.0%
! TTGATATGTCTGAAGTAGGA+AGG - tig0025528:17602-17621 Msa1423320:CDS 35.0%
! TGATATGTCTGAAGTAGGAA+GGG - tig0025528:17603-17622 Msa1423320:CDS 35.0%
CCATCCAAATTCCTTAAATG+TGG + tig0025528:17670-17689 None:intergenic 35.0%
CCACATTTAAGGAATTTGGA+TGG - tig0025528:17667-17686 Msa1423320:CDS 35.0%
TAACAAGTGTTCACTCTTCT+CGG - tig0025528:17890-17909 Msa1423320:five_prime_UTR 35.0%
GCATGGTTGAGTATTTGAGT+TGG + tig0025528:14247-14266 None:intergenic 40.0%
TCAACCATGCTTGAAATCCA+AGG - tig0025528:14257-14276 Msa1423320:three_prime_UTR 40.0%
GTGTGTTACAAATTACCACC+TGG - tig0025528:14347-14366 Msa1423320:three_prime_UTR 40.0%
TATGGTGCATGTCCTAAGAT+TGG + tig0025528:14389-14408 None:intergenic 40.0%
TGTATGACTGAGCTTCTTAG+TGG - tig0025528:14659-14678 Msa1423320:CDS 40.0%
GTATGACTGAGCTTCTTAGT+GGG - tig0025528:14660-14679 Msa1423320:CDS 40.0%
ACTATGGGAAAAAAGAGTGG+TGG - tig0025528:14827-14846 Msa1423320:CDS 40.0%
CTATGGGAAAAAAGAGTGGT+GGG - tig0025528:14828-14847 Msa1423320:CDS 40.0%
AGGGAAATTGGTGAACTTCT+TGG - tig0025528:14887-14906 Msa1423320:CDS 40.0%
ATGAGGCCTTTAGATCTACA+AGG - tig0025528:14941-14960 Msa1423320:CDS 40.0%
ATCTACAAGGATTTGGGAAG+AGG - tig0025528:14954-14973 Msa1423320:CDS 40.0%
GAAGAAGCTAGAGCTAAAGA+AGG - tig0025528:15034-15053 Msa1423320:CDS 40.0%
! AAGTGCTAAAGCTTTTGCTC+TGG - tig0025528:15147-15166 Msa1423320:intron 40.0%
GGTCAAGATCAGTTTCAACA+TGG + tig0025528:15680-15699 None:intergenic 40.0%
! GACAGCCGAGATCATATTTT+TGG + tig0025528:15746-15765 None:intergenic 40.0%
!!! TCTCGGCTGTCTATTTTGAT+CGG - tig0025528:15755-15774 Msa1423320:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + tig0025528:16459-16478 None:intergenic 40.0%
! TACTTTGGAAGTAGTGTGCA+TGG - tig0025528:16341-16360 Msa1423320:intron 40.0%
GTGTGCATGGTATTAATTGG+AGG - tig0025528:16354-16373 Msa1423320:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - tig0025528:16459-16478 Msa1423320:intron 40.0%
!! TGTAGGTATTGGAGCATGTA+AGG - tig0025528:16503-16522 Msa1423320:intron 40.0%
ATAGGGACCAAAAATGCTGA+TGG + tig0025528:16721-16740 None:intergenic 40.0%
ACCAGCAAGTGTGTTAGAAT+GGG - tig0025528:17084-17103 Msa1423320:CDS 40.0%
TAGCAAATATTGGAGTTGGG+GGG + tig0025528:17261-17280 None:intergenic 40.0%
CTAGCAAATATTGGAGTTGG+GGG + tig0025528:17262-17281 None:intergenic 40.0%
! TTCATCAATGCATGGGCTAT+TGG - tig0025528:17340-17359 Msa1423320:CDS 40.0%
TTGGTAGAGACCCTAACTAT+TGG - tig0025528:17359-17378 Msa1423320:CDS 40.0%
TGGTAGAGACCCTAACTATT+GGG - tig0025528:17360-17379 Msa1423320:CDS 40.0%
! GTGGATTGTCCCAATAGTTA+GGG + tig0025528:17372-17391 None:intergenic 40.0%
!! AGTGGATTGTCCCAATAGTT+AGG + tig0025528:17373-17392 None:intergenic 40.0%
CTTTCAGGGTTAAAGACTAG+TGG + tig0025528:17391-17410 None:intergenic 40.0%
!! CAACTTTTGCCATTTGGTAG+TGG - tig0025528:17469-17488 Msa1423320:CDS 40.0%
! TCAAACTTGCAAGTGTTGCT+TGG + tig0025528:17537-17556 None:intergenic 40.0%
! AGGAAGGGTTACTGTGTTTT+TGG - tig0025528:17618-17637 Msa1423320:CDS 40.0%
AAGGAATTTGGATGGAATGG+TGG - tig0025528:17675-17694 Msa1423320:CDS 40.0%
GTATGTGAAAACTTCATGGC+AGG - tig0025528:17785-17804 Msa1423320:CDS 40.0%
! GTAGCCTTGGATTTCAAGCA+TGG + tig0025528:14264-14283 None:intergenic 45.0%
! AATGAAATTGGTGGTCCAGG+TGG + tig0025528:14365-14384 None:intergenic 45.0%
! GGAAATGAAATTGGTGGTCC+AGG + tig0025528:14368-14387 None:intergenic 45.0%
! GTGTTTTATGGGGACCCTTT+TGG - tig0025528:14727-14746 Msa1423320:CDS 45.0%
GGTGGGATGAATGATGAAGT+TGG - tig0025528:14845-14864 Msa1423320:CDS 45.0%
!! AAGAAGGTGCTGGTAGTGAT+AGG - tig0025528:15050-15069 Msa1423320:intron 45.0%
! TGCTGGTAGTGATAGGAAGA+AGG - tig0025528:15057-15076 Msa1423320:intron 45.0%
!!! GGCTGTCTATTTTGATCGGA+TGG - tig0025528:15759-15778 Msa1423320:intron 45.0%
!!! GTCTATTTTGATCGGATGGC+TGG - tig0025528:15763-15782 Msa1423320:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + tig0025528:16458-16477 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - tig0025528:16458-16477 Msa1423320:intron 45.0%
CAACAGGACATGTTCATTGC+AGG - tig0025528:17052-17071 Msa1423320:CDS 45.0%
GACCAGCAAGTGTGTTAGAA+TGG - tig0025528:17083-17102 Msa1423320:CDS 45.0%
CTTCTTCTCCCACTACCAAA+TGG + tig0025528:17481-17500 None:intergenic 45.0%
GCAAAGCAAGTGAAGAACCA+GGG + tig0025528:17507-17526 None:intergenic 45.0%
AGCAAAGCAAGTGAAGAACC+AGG + tig0025528:17508-17527 None:intergenic 45.0%
GCAAGCCTGTTCCACATTTA+AGG - tig0025528:17656-17675 Msa1423320:CDS 45.0%
!! TATTTATAAAAAAAAAATGA+GGG + tig0025528:15188-15207 None:intergenic 5.0%
!! ATATTTATAAAAAAAAAATG+AGG + tig0025528:15189-15208 None:intergenic 5.0%
!!! AATTGTAATTTTATTTTATA+AGG + tig0025528:16678-16697 None:intergenic 5.0%
! GCTAGAGCTAAAGAAGGTGC+TGG - tig0025528:15040-15059 Msa1423320:CDS 50.0%
GCCCATTCTAACACACTTGC+TGG + tig0025528:17088-17107 None:intergenic 50.0%
GGAACAGGCTTGCACTTCAA+TGG + tig0025528:17649-17668 None:intergenic 50.0%
AGTGGGAGAAGAAGTTGCCC+TGG - tig0025528:17487-17506 Msa1423320:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0025528 gene 14100 18021 14100 ID=Msa1423320;Name=Msa1423320
tig0025528 mRNA 14100 18021 14100 ID=Msa1423320-mRNA-1;Parent=Msa1423320;Name=Msa1423320-mRNA-1;_AED=0.01;_eAED=0.01;_QI=163|1|1|1|1|1|2|316|517
tig0025528 exon 14100 15063 14100 ID=Msa1423320-mRNA-1:exon:3170;Parent=Msa1423320-mRNA-1
tig0025528 exon 16953 18021 16953 ID=Msa1423320-mRNA-1:exon:3169;Parent=Msa1423320-mRNA-1
tig0025528 five_prime_UTR 17859 18021 17859 ID=Msa1423320-mRNA-1:five_prime_utr;Parent=Msa1423320-mRNA-1
tig0025528 CDS 16953 17858 16953 ID=Msa1423320-mRNA-1:cds;Parent=Msa1423320-mRNA-1
tig0025528 CDS 14416 15063 14416 ID=Msa1423320-mRNA-1:cds;Parent=Msa1423320-mRNA-1
tig0025528 three_prime_UTR 14100 14415 14100 ID=Msa1423320-mRNA-1:three_prime_utr;Parent=Msa1423320-mRNA-1
Gene Sequence

>Msa1423320

ATGCTTGAAATCCAAGGCTACGTAGTATTATTTCTATTATGGTTCATTTCAACTATTTTCATTAGGTCACTTTTCAAAAAATCCGTGTGTTACAAATTACCACCTGGACCACCAATTTCATTTCCAATCTTAGGACATGCACCATATCTTAGATCACTTCTTCATAAATCACTTTACAAACTTTCAAATCGTTATGGACCTTTAATGCATATTATGCTTGGTTCACAACATGTAGTAGTTGCATCAACTGCTGAAAGTGCTAAGCAAATTTTAAAGACTTGTGAAGAGTCATTTACCAATAGACCTATTATGATTGCTAGTGAGAATTTAACATATGGTGCTGCTGATTATTTTTTCATACCTTATGGAAATTATTGGAGGTTCCTTAAGAAGCTTTGTATGACTGAGCTTCTTAGTGGGAAAACTCTTGAACACTTTGTTCACATACGTGAAGATGAAATTAAGTGTTTTATGGGGACCCTTTTGGAAATATCTAAAAATGGTAAACCAATTGAAATGAGGCATGAACTTATTAGGCATACTAATAACATCATTTCTAGAATGACTATGGGAAAAAAGAGTGGTGGGATGAATGATGAAGTTGGTCAATTGAGAAAAGTTGTTAGGGAAATTGGTGAACTTCTTGGTGCTTTTAATTTAGGTGATATTATTGGGTTTATGAGGCCTTTAGATCTACAAGGATTTGGGAAGAGGAACAAAGATACACATCATAAGATGGATTTAATGATGGAGAAAGTGTTGAAGGAGCATGAAGAAGCTAGAGCTAAAGAAGGTGCTGGTAGTGATAGGAAGAAGGATCTGTTTGATATTTTGTTGAACTTGATTGAAGCTGATGATGGAGCTGAAAGTAAACTCACTAGACAAAGTGCTAAAGCTTTTGCTCTGGACATGTTCATTGCAGGAACAAATGGACCAGCAAGTGTGTTAGAATGGGCACTAGCAGAACTAATAAGAAATCCACATGTTTTCAAGAAAGCAAGAGAAGAGATTGACTCTATTGTTGGCAAAGAAAGGCTTTTCAAAGAATCTGATATACCAAATTTACCTTATCTTCAAGCAGTAGTTAAGGAAACTCTAAGAATGCACCCCCCAACTCCAATATTTGCTAGAGAAGCTACAAGAAGTTGTCAAGTTGATGGATATGATGTTCCAGCATTTTCCAAGATTTTCATCAATGCATGGGCTATTGGTAGAGACCCTAACTATTGGGACAATCCACTAGTCTTTAACCCTGAAAGATTCTTACAAAGTGATGATCCTAGCAAGAGTAAGATTGATGTAAGGGGACAATATTATCAACTTTTGCCATTTGGTAGTGGGAGAAGAAGTTGCCCTGGTTCTTCACTTGCTTTGCTTGTTATCCAAGCAACACTTGCAAGTTTGATACAATGCTTTGATTGGGTTGTTAATGATGGTAAGAGTCATGATATTGATATGTCTGAAGTAGGAAGGGTTACTGTGTTTTTGGCTAAACCATTGAAGTGCAAGCCTGTTCCACATTTAAGGAATTTGGATGGAATGGTGGTCCAGTGA
Protein sequence

>Msa1423320

MLEIQGYVVLFLLWFISTIFIRSLFKKSVCYKLPPGPPISFPILGHAPYLRSLLHKSLYKLSNRYGPLMHIMLGSQHVVVASTAESAKQILKTCEESFTNRPIMIASENLTYGAADYFFIPYGNYWRFLKKLCMTELLSGKTLEHFVHIREDEIKCFMGTLLEISKNGKPIEMRHELIRHTNNIISRMTMGKKSGGMNDEVGQLRKVVREIGELLGAFNLGDIIGFMRPLDLQGFGKRNKDTHHKMDLMMEKVLKEHEEARAKEGAGSDRKKDLFDILLNLIEADDGAESKLTRQSAKAFALDMFIAGTNGPASVLEWALAELIRNPHVFKKAREEIDSIVGKERLFKESDIPNLPYLQAVVKETLRMHPPTPIFAREATRSCQVDGYDVPAFSKIFINAWAIGRDPNYWDNPLVFNPERFLQSDDPSKSKIDVRGQYYQLLPFGSGRRSCPGSSLALLVIQATLASLIQCFDWVVNDGKSHDIDMSEVGRVTVFLAKPLKCKPVPHLRNLDGMVVQ*