AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0351760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0351760 MtrunA17_Chr3g0079271 96.601 559 16 1 1 556 1 559 0.0 1100
Msa0351760 MtrunA17_Chr2g0293351 45.558 439 216 5 96 523 21 447 8.58e-123 369
Msa0351760 MtrunA17_Chr2g0293371 41.226 359 190 4 174 521 9 357 1.88e-80 256
Msa0351760 MtrunA17_Chr3g0098661 32.000 475 265 5 95 511 13 487 1.01e-64 219
Msa0351760 MtrunA17_Chr2g0293361 42.803 264 140 2 261 524 1 253 6.31e-64 209
Msa0351760 MtrunA17_Chr1g0205221 29.798 396 266 5 106 495 120 509 8.84e-37 143
Msa0351760 MtrunA17_Chr1g0150001 28.395 405 270 7 121 517 75 467 2.64e-34 135
Msa0351760 MtrunA17_Chr1g0150031 29.299 157 111 0 355 511 5 161 9.96e-17 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0351760 AT2G33280.1 56.387 548 221 6 10 551 2 537 0.0 565
Msa0351760 AT1G04570.1 55.835 557 226 6 1 556 5 542 2.28e-179 517
Msa0351760 AT2G33280.3 62.704 429 160 0 123 551 1 429 5.23e-179 511
Msa0351760 AT2G33280.2 61.127 355 138 0 197 551 1 355 1.26e-140 411
Msa0351760 AT1G04570.2 60.836 383 145 2 175 556 16 394 1.80e-129 384
Msa0351760 AT1G64890.1 42.723 426 230 3 101 519 22 440 5.80e-100 310
Msa0351760 AT5G54860.1 32.696 471 262 6 95 511 13 482 3.95e-66 223
Msa0351760 AT2G32040.1 24.806 516 339 9 19 495 20 525 6.13e-35 139
Msa0351760 AT2G32040.2 28.715 397 271 6 106 495 3 394 2.03e-33 132
Msa0351760 AT5G25050.1 24.413 426 300 7 117 533 66 478 1.37e-28 119
Msa0351760 AT1G79710.2 23.113 424 312 5 120 538 73 487 1.44e-24 107
Msa0351760 AT1G79710.1 23.113 424 312 5 120 538 73 487 1.44e-24 107
Msa0351760 AT5G25040.2 24.841 471 303 12 103 539 58 511 1.84e-24 107
Msa0351760 AT5G25040.4 24.834 451 303 11 103 539 58 486 1.50e-23 104
Msa0351760 AT5G10820.1 26.463 393 246 11 143 514 104 474 2.94e-23 103
Msa0351760 AT5G25040.1 26.158 367 239 10 103 459 58 402 5.66e-19 90.1
Msa0351760 AT1G79710.3 23.353 334 242 5 120 448 73 397 6.78e-19 89.4
Msa0351760 AT5G25040.5 24.501 351 238 8 202 539 3 339 8.03e-16 79.3
Msa0351760 AT5G25040.3 26.911 327 205 11 103 418 58 361 4.09e-14 74.7

Find 149 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTCAACAACCTACATTTA+TGG 0.130903 3_1:-19113413 Msa0351760:CDS
GATATGTACTCTAGCTATTT+TGG 0.163551 3_1:-19110160 Msa0351760:three_prime_UTR
AGAGGAGAATAAGAAGAAAA+AGG 0.187976 3_1:-19113314 Msa0351760:CDS
CTTTCTGATGTTATCTATAT+TGG 0.193250 3_1:-19113091 Msa0351760:CDS
GGTCAGTTGATGCTTCTTTC+AGG 0.200974 3_1:-19111147 Msa0351760:CDS
TTGTGATGTTTGTGTAAATT+TGG 0.237519 3_1:+19113496 None:intergenic
GATGCACTCATTGTACTTAT+TGG 0.251954 3_1:+19113680 None:intergenic
CCGTACTTTATAACCGATAT+TGG 0.258220 3_1:-19111122 Msa0351760:CDS
ATGCTTATATTGTGTGGATT+TGG 0.263672 3_1:-19113259 Msa0351760:CDS
TATGGCTAGTAATCTCAATT+TGG 0.267578 3_1:-19113185 Msa0351760:CDS
GATGCTCTTGTAGCTGAGTA+TGG 0.275436 3_1:-19111588 Msa0351760:CDS
GGTATTGGTTACAAGGGTTT+AGG 0.283019 3_1:-19113237 Msa0351760:CDS
GTTACTTCTTGATCTTGTTT+TGG 0.301857 3_1:-19111043 Msa0351760:CDS
GTTTAAACTCCTTCCTTTCT+CGG 0.304522 3_1:-19110938 Msa0351760:CDS
ATCGAACCAATCCATCTTAA+AGG 0.311135 3_1:+19110724 None:intergenic
GAGATAGAAAAGAATAATAA+AGG 0.313895 3_1:+19113622 None:intergenic
GGATCTGCACTGCGCCTATC+AGG 0.329497 3_1:+19111079 None:intergenic
CAAGGAGCGAACACCTCATT+TGG 0.337799 3_1:+19110991 None:intergenic
ATGATCAATTCTTACCTTTG+TGG 0.339144 3_1:-19110557 Msa0351760:three_prime_UTR
AATATCATGAACACGATTCT+TGG 0.342943 3_1:+19111459 None:intergenic
GCCACTGTTCCAATGCTTAC+GGG 0.347306 3_1:-19111240 Msa0351760:CDS
GGTTCAAGTACTAGTCAAAT+TGG 0.348370 3_1:-19113292 Msa0351760:CDS
TCAACAAGAGAGGATTCTTT+AGG 0.351653 3_1:-19111399 Msa0351760:CDS
TATTGTGTGGATTTGGGTAT+TGG 0.353151 3_1:-19113252 Msa0351760:CDS
ATATTTGAGATCAGTTGATA+TGG 0.353975 3_1:+19110121 None:intergenic
GTTGCAAGATTTAGAGTTGA+TGG 0.359251 3_1:+19111366 None:intergenic
CCATGAACGCGTATGATTGT+AGG 0.365663 3_1:+19111544 None:intergenic
ATCCTATCATCAATAGTTAG+TGG 0.367560 3_1:-19110847 Msa0351760:CDS
GAGTGTGTTTATTGAGAAAG+AGG 0.371786 3_1:-19113332 Msa0351760:CDS
CTGTGTCTGATAGCAAAATA+TGG 0.376189 3_1:+19111215 None:intergenic
AGACAGATAAATCTTAAATT+CGG 0.377256 3_1:-19111018 Msa0351760:CDS
CAAAAGAGGTATGTTTGTAT+AGG 0.380117 3_1:-19110314 Msa0351760:three_prime_UTR
TATGGGAAGAAACACAAAAT+TGG 0.382333 3_1:-19111570 Msa0351760:CDS
CCTACAATCATACGCGTTCA+TGG 0.384503 3_1:-19111544 Msa0351760:CDS
TGCTTATATTGTGTGGATTT+GGG 0.394434 3_1:-19113258 Msa0351760:CDS
CAGCTTTACTACCTTTAAGA+TGG 0.403194 3_1:-19110735 Msa0351760:CDS
AGCTGTGCTTCTCAGTAACT+TGG 0.405069 3_1:-19111637 Msa0351760:CDS
TGCCACTGTTCCAATGCTTA+CGG 0.411546 3_1:-19111241 Msa0351760:CDS
AGAGTTGGAAAAGTTGTGAT+TGG 0.420716 3_1:-19110631 Msa0351760:CDS
CTATGTTTGGATTCTTAACA+TGG 0.425424 3_1:-19110418 Msa0351760:three_prime_UTR
AGAGATCCTTCGCAGCCTTT+CGG 0.426540 3_1:+19110895 None:intergenic
GGATTTGGGTATTGGTTACA+AGG 0.435925 3_1:-19113244 Msa0351760:CDS
TTACTACCTTTAAGATGGAT+TGG 0.436316 3_1:-19110730 Msa0351760:CDS
CTAGACCAACCGATGATCAT+AGG 0.439316 3_1:+19111177 None:intergenic
AATGATCATGCAAGGATGAT+TGG 0.442413 3_1:-19110530 Msa0351760:three_prime_UTR
CCAATATCGGTTATAAAGTA+CGG 0.443188 3_1:+19111122 None:intergenic
TTAGCCGCAGGTGGAATCTT+AGG 0.445298 3_1:-19111519 Msa0351760:CDS
GAAGTAACGACGAAGCGTAT+AGG 0.450700 3_1:+19111058 None:intergenic
CACTTGTTAATAAGACCCTT+TGG 0.450718 3_1:-19110215 Msa0351760:three_prime_UTR
ATACCTCCAGTGATAATGTA+AGG 0.452475 3_1:+19113052 None:intergenic
ACCTATGTCACAGTCTGATT+CGG 0.454694 3_1:-19110701 Msa0351760:CDS
CATATAGGCGCGAAAGGGAA+TGG 0.456974 3_1:-19110597 Msa0351760:CDS
TGCTAGTTGTACAGATAGTA+AGG 0.458544 3_1:+19111431 None:intergenic
GATGTATTTATTACATTGAC+CGG 0.462794 3_1:-19110286 Msa0351760:three_prime_UTR
TCTGATGTTATCTATATTGG+TGG 0.463711 3_1:-19113088 Msa0351760:CDS
GCGCGTAGAAACAGAAGAGT+TGG 0.479766 3_1:-19110646 Msa0351760:CDS
ATCGGTTGGTCTAGAGTGAT+TGG 0.481020 3_1:-19111168 Msa0351760:CDS
TCTTTGCTCGGCATTACATC+CGG 0.488077 3_1:-19110802 Msa0351760:CDS
AGCCACTAACTATTGATGAT+AGG 0.489495 3_1:+19110845 None:intergenic
ATGGTGGCTAAACCACTCTA+TGG 0.489848 3_1:-19113118 Msa0351760:CDS
GTATTCTGCTAATCTTCCTA+TGG 0.490689 3_1:-19113137 Msa0351760:CDS
TGTTGTGAACATGTTATGAT+TGG 0.491516 3_1:+19113469 None:intergenic
GAATGCTAACATGTGTCCTT+AGG 0.492353 3_1:-19110353 Msa0351760:three_prime_UTR
GTAAGCACTTCACGTGCAGC+AGG 0.495854 3_1:+19111672 None:intergenic
GTTGGATTGGCCTCTTTGCT+CGG 0.508973 3_1:-19110814 Msa0351760:CDS
ATTTCATGATCAATGTCCTA+AGG 0.509696 3_1:+19110337 None:intergenic
TGTACAAGTTGCAATATTGA+AGG 0.509895 3_1:+19113160 None:intergenic
ATCCTTTGCAACTTCAGTAA+TGG 0.515704 3_1:+19111608 None:intergenic
AGATTTAGAGTTGATGGTTG+TGG 0.516019 3_1:+19111372 None:intergenic
TAGACAGTTCTACGAGGTTG+TGG 0.517314 3_1:+19113839 None:intergenic
TATTGGTGAATGAACAATGA+AGG 0.522733 3_1:+19113697 None:intergenic
TTCATCACAAAAGAATCCAT+TGG 0.525638 3_1:-19113533 Msa0351760:CDS
AATATGGAGCCCGTAAGCAT+TGG 0.527587 3_1:+19111231 None:intergenic
TAATGCATATAGGCGCGAAA+GGG 0.528536 3_1:-19110602 Msa0351760:CDS
TGAAATTGCAAGATGAATCA+TGG 0.530359 3_1:+19113552 None:intergenic
TCCGAATCAGACTGTGACAT+AGG 0.530550 3_1:+19110700 None:intergenic
TAAATTCGGAATTCCAAATG+AGG 0.534129 3_1:-19111004 Msa0351760:CDS
AAAATCCTACGCTTTGAAGC+AGG 0.534347 3_1:+19110449 None:intergenic
TTTGCGAACAGAACCGAGAA+AGG 0.535403 3_1:+19110925 None:intergenic
GATCCAACGATCCATAAAAG+TGG 0.536954 3_1:+19111267 None:intergenic
ATATAGGCGCGAAAGGGAAT+GGG 0.537383 3_1:-19110596 Msa0351760:CDS
ATTACATCCGGTGATTACTC+AGG 0.538427 3_1:-19110790 Msa0351760:CDS
AAACAAATGCTTATATTGTG+TGG 0.539138 3_1:-19113265 Msa0351760:CDS
AGAATCCCTTACATTATCAC+TGG 0.541279 3_1:-19113058 Msa0351760:CDS
CGAACAGAACCGAGAAAGGA+AGG 0.544556 3_1:+19110929 None:intergenic
TGTGAGCTAACAATGGCATA+AGG 0.546268 3_1:+19110482 None:intergenic
TTCTACGAGGTTGTGGCGAG+TGG 0.546685 3_1:+19113846 None:intergenic
AATAAAAGAGAGAGAAGAGA+GGG 0.548563 3_1:+19113755 None:intergenic
ATTGATCATGAAATCAAAAG+AGG 0.549129 3_1:-19110328 Msa0351760:three_prime_UTR
TGTAGATTGTTAAAATCCAA+AGG 0.553682 3_1:+19110199 None:intergenic
GCGTTCATGGCATTAGCCGC+AGG 0.556853 3_1:-19111531 Msa0351760:CDS
GATTTGGGTATTGGTTACAA+GGG 0.557556 3_1:-19113243 Msa0351760:CDS
GCTGTGCTTCTCAGTAACTT+GGG 0.559091 3_1:-19111636 Msa0351760:CDS
AACAAGTGTCTTAACGACAT+TGG 0.561515 3_1:+19110230 None:intergenic
ATCATGAACACGATTCTTGG+AGG 0.564323 3_1:+19111462 None:intergenic
TTTCCGATGAGAAACCTGAT+AGG 0.566163 3_1:-19111093 Msa0351760:CDS
GTAGATTGTTAAAATCCAAA+GGG 0.568093 3_1:+19110200 None:intergenic
CTTTGACAATTCACAAGGTG+TGG 0.571816 3_1:+19110393 None:intergenic
ATCCATTACTGAAGTTGCAA+AGG 0.575712 3_1:-19111610 Msa0351760:CDS
TTGGTTCGATTAATGCATAT+AGG 0.577741 3_1:-19110612 Msa0351760:CDS
GGGAAGAAACACAAAATTGG+CGG 0.578871 3_1:-19111567 Msa0351760:CDS
AATCTTGATCCTATGATCAT+CGG 0.579039 3_1:-19111186 Msa0351760:CDS
TCAAGTACTAGTCAAATTGG+AGG 0.580285 3_1:-19113289 Msa0351760:CDS
TTAATGCATATAGGCGCGAA+AGG 0.580820 3_1:-19110603 Msa0351760:CDS
TTATGTCCGAAAGGCTGCGA+AGG 0.582846 3_1:-19110901 Msa0351760:CDS
ATGCTCTTGTAGCTGAGTAT+GGG 0.582866 3_1:-19111587 Msa0351760:CDS
GGTTTGTTAATAATCACCAA+TGG 0.584719 3_1:+19113517 None:intergenic
AATTTCTTTCTCAACAAGAG+AGG 0.586622 3_1:-19111409 Msa0351760:CDS
TACCTCCAGTGATAATGTAA+GGG 0.586765 3_1:+19113053 None:intergenic
TGTGTGTCAACCATAAATGT+AGG 0.588044 3_1:+19113403 None:intergenic
ACCTTGTGAATTGTCAAAGG+TGG 0.589692 3_1:-19110389 Msa0351760:three_prime_UTR
AAGTGTCTTAACGACATTGG+AGG 0.590034 3_1:+19110233 None:intergenic
TCAGAAAGAATTCCATAGAG+TGG 0.590482 3_1:+19113106 None:intergenic
TCTTGCAACACAATCCATCT+CGG 0.591171 3_1:-19111352 Msa0351760:CDS
GTACAAGTTGCAATATTGAA+GGG 0.593637 3_1:+19113161 None:intergenic
ATCCAACGATCCATAAAAGT+GGG 0.595254 3_1:+19111268 None:intergenic
ATAGCTAGAGTACATATCAA+AGG 0.595634 3_1:+19110165 None:intergenic
TTCTGCTAATCTTCCTATGG+TGG 0.599176 3_1:-19113134 Msa0351760:CDS
TTCATGGCATTAGCCGCAGG+TGG 0.601108 3_1:-19111528 Msa0351760:CDS
CACACCTTGTGAATTGTCAA+AGG 0.601536 3_1:-19110392 Msa0351760:three_prime_UTR
CATGATCATTAAAGCCACAA+AGG 0.601547 3_1:+19110543 None:intergenic
GATTACTCAGGCTTGACTGT+GGG 0.603520 3_1:-19110778 Msa0351760:CDS
ATCTTAGGCAACTTGATCGG+TGG 0.604287 3_1:-19111504 Msa0351760:CDS
TTCGCAAATTTATGTCCGAA+AGG 0.605242 3_1:-19110910 Msa0351760:CDS
GCCCGTAAGCATTGGAACAG+TGG 0.605847 3_1:+19111239 None:intergenic
GAATAAAAGAGAGAGAAGAG+AGG 0.607153 3_1:+19113754 None:intergenic
ATAGGATCAAAGCTGATGCA+AGG 0.610715 3_1:+19110863 None:intergenic
TGCCTCCTGCTTCAAAGCGT+AGG 0.610870 3_1:-19110454 Msa0351760:three_prime_UTR
GGAATCTTAGGCAACTTGAT+CGG 0.615694 3_1:-19111507 Msa0351760:CDS
ATCCTACGCTTTGAAGCAGG+AGG 0.619848 3_1:+19110452 None:intergenic
TTGATCCTATGATCATCGGT+TGG 0.620203 3_1:-19111182 Msa0351760:CDS
ATCCCTTACATTATCACTGG+AGG 0.623901 3_1:-19113055 Msa0351760:intron
AGTCAAGCCTGAGTAATCAC+CGG 0.627145 3_1:+19110783 None:intergenic
TCTGCCAAACCCGAAAAGCA+AGG 0.628364 3_1:+19110973 None:intergenic
CAAGTACTAGTCAAATTGGA+GGG 0.629681 3_1:-19113288 Msa0351760:CDS
AAGCACAGCTGCAACTAAGA+CGG 0.631279 3_1:+19111650 None:intergenic
ACCACCTTTGACAATTCACA+AGG 0.633543 3_1:+19110388 None:intergenic
GTGGCTTTAATGATCATGCA+AGG 0.634484 3_1:-19110538 Msa0351760:three_prime_UTR
TAGAGTGGTTTAGCCACCAT+AGG 0.639848 3_1:+19113121 None:intergenic
GCGCCTATCAGGTTTCTCAT+CGG 0.641117 3_1:+19111090 None:intergenic
TGATTACTCAGGCTTGACTG+TGG 0.648155 3_1:-19110779 Msa0351760:CDS
AAAGGGAATGGGAATCGCAA+AGG 0.648256 3_1:-19110585 Msa0351760:CDS
GTTGCCTAAGATTCCACCTG+CGG 0.660068 3_1:+19111515 None:intergenic
TGAAGATACAAGTAAAACAC+CGG 0.663374 3_1:+19110267 None:intergenic
TAAGCACTTCACGTGCAGCA+GGG 0.666791 3_1:+19111673 None:intergenic
TGAAAATTAAGAGCAAGCCA+AGG 0.671783 3_1:+19113208 None:intergenic
GGATGTAATGCCGAGCAAAG+AGG 0.684382 3_1:+19110804 None:intergenic
CAACTCGTGTGAGCTAACAA+TGG 0.700698 3_1:+19110475 None:intergenic
ATATTGTAGACAGTTCTACG+AGG 0.797859 3_1:+19113833 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATAATAAAGGAAAAATA+GGG + chr3_1:19110356-19110375 None:intergenic 15.0%
!! AAGAATAATAAAGGAAAAAT+AGG + chr3_1:19110357-19110376 None:intergenic 15.0%
!!! CATTGATTTCTTTTATAAAT+AGG - chr3_1:19111415-19111434 Msa0351760:CDS 15.0%
!!! GATTTTATTATCATCAATTT+TGG - chr3_1:19111508-19111527 Msa0351760:CDS 15.0%
!! TAAAACCTTTATATTACATT+AGG - chr3_1:19111832-19111851 Msa0351760:intron 15.0%
!! AAAACCTTTATATTACATTA+GGG - chr3_1:19111833-19111852 Msa0351760:intron 15.0%
!!! TTTTAAGTTATTTTGTGTTT+AGG - chr3_1:19111923-19111942 Msa0351760:intron 15.0%
!! ACAAATATCAAGTTAAATAA+AGG + chr3_1:19112160-19112179 None:intergenic 15.0%
!! TGTGTAAGTTTAAAAATTGA+GGG + chr3_1:19110199-19110218 None:intergenic 20.0%
!! GAGATAGAAAAGAATAATAA+AGG + chr3_1:19110366-19110385 None:intergenic 20.0%
!! ATTTAACACATTAACAGAAA+AGG + chr3_1:19110983-19111002 None:intergenic 20.0%
!! TTTCAAATTATTAGTTGTGT+CGG + chr3_1:19111085-19111104 None:intergenic 20.0%
!!! AATTGAATATCTCATTTTAG+TGG - chr3_1:19111462-19111481 Msa0351760:CDS 20.0%
!!! ATGTAATATAAAGGTTTTAG+AGG + chr3_1:19111831-19111850 None:intergenic 20.0%
!! GTTATGAATAAAATTTACCT+TGG - chr3_1:19112053-19112072 Msa0351760:intron 20.0%
!!! GTAATATTTTTATTCAACCA+AGG + chr3_1:19112073-19112092 None:intergenic 20.0%
!!! CCAAATAAGTTTCATTTTAT+GGG + chr3_1:19112240-19112259 None:intergenic 20.0%
!!! ACCAAATAAGTTTCATTTTA+TGG + chr3_1:19112241-19112260 None:intergenic 20.0%
!! AGACAGATAAATCTTAAATT+CGG - chr3_1:19112967-19112986 Msa0351760:intron 20.0%
!!! ATTTTGTTTTTCTCTATGTT+TGG - chr3_1:19113554-19113573 Msa0351760:exon 20.0%
! GTGTAAGTTTAAAAATTGAG+GGG + chr3_1:19110198-19110217 None:intergenic 25.0%
! GTGTGTAAGTTTAAAAATTG+AGG + chr3_1:19110200-19110219 None:intergenic 25.0%
! AATAAAGGAAAAATAGGGTA+TGG + chr3_1:19110351-19110370 None:intergenic 25.0%
! TTGTGATGTTTGTGTAAATT+TGG + chr3_1:19110492-19110511 None:intergenic 25.0%
! AAACAAATGCTTATATTGTG+TGG - chr3_1:19110720-19110739 Msa0351760:CDS 25.0%
! CTTTCTGATGTTATCTATAT+TGG - chr3_1:19110894-19110913 Msa0351760:CDS 25.0%
! TGATATTGAGATGTAGATAT+TGG - chr3_1:19111181-19111200 Msa0351760:CDS 25.0%
! TAGGAAATTGAGAAAATCAA+AGG - chr3_1:19111341-19111360 Msa0351760:CDS 25.0%
! TATTCATAACGAAATTGATC+TGG + chr3_1:19112043-19112062 None:intergenic 25.0%
! GTGTATTATAAGATTTCAAG+AGG - chr3_1:19112094-19112113 Msa0351760:intron 25.0%
! AAAAGACATTAAGAAATGCA+AGG - chr3_1:19112127-19112146 Msa0351760:intron 25.0%
! CCCATAAAATGAAACTTATT+TGG - chr3_1:19112237-19112256 Msa0351760:intron 25.0%
! ATTGATCATGAAATCAAAAG+AGG - chr3_1:19113657-19113676 Msa0351760:five_prime_UTR 25.0%
! GATGTATTTATTACATTGAC+CGG - chr3_1:19113699-19113718 Msa0351760:five_prime_UTR 25.0%
! GTAGATTGTTAAAATCCAAA+GGG + chr3_1:19113788-19113807 None:intergenic 25.0%
! TGTAGATTGTTAAAATCCAA+AGG + chr3_1:19113789-19113808 None:intergenic 25.0%
AATAAAAGAGAGAGAAGAGA+GGG + chr3_1:19110233-19110252 None:intergenic 30.0%
TATTGGTGAATGAACAATGA+AGG + chr3_1:19110291-19110310 None:intergenic 30.0%
TGAAATTGCAAGATGAATCA+TGG + chr3_1:19110436-19110455 None:intergenic 30.0%
TTCATCACAAAAGAATCCAT+TGG - chr3_1:19110452-19110471 Msa0351760:three_prime_UTR 30.0%
!! GGTTTGTTAATAATCACCAA+TGG + chr3_1:19110471-19110490 None:intergenic 30.0%
TGTTGTGAACATGTTATGAT+TGG + chr3_1:19110519-19110538 None:intergenic 30.0%
ATCTCAACAACCTACATTTA+TGG - chr3_1:19110572-19110591 Msa0351760:exon 30.0%
GAGAGAGAATAAGAAAAAGA+AGG - chr3_1:19110620-19110639 Msa0351760:CDS 30.0%
GAATAAGAAAAAGAAGGAAG+AGG - chr3_1:19110626-19110645 Msa0351760:CDS 30.0%
AGAGGAGAATAAGAAGAAAA+AGG - chr3_1:19110671-19110690 Msa0351760:CDS 30.0%
GAGGAGAATAAGAAGAAAAA+GGG - chr3_1:19110672-19110691 Msa0351760:CDS 30.0%
ATGCTTATATTGTGTGGATT+TGG - chr3_1:19110726-19110745 Msa0351760:CDS 30.0%
TGCTTATATTGTGTGGATTT+GGG - chr3_1:19110727-19110746 Msa0351760:CDS 30.0%
! GCTTGCTCTTAATTTTCATA+TGG - chr3_1:19110782-19110801 Msa0351760:CDS 30.0%
TATGGCTAGTAATCTCAATT+TGG - chr3_1:19110800-19110819 Msa0351760:CDS 30.0%
GTACAAGTTGCAATATTGAA+GGG + chr3_1:19110827-19110846 None:intergenic 30.0%
TGTACAAGTTGCAATATTGA+AGG + chr3_1:19110828-19110847 None:intergenic 30.0%
TCTGATGTTATCTATATTGG+TGG - chr3_1:19110897-19110916 Msa0351760:CDS 30.0%
ACACGATTCAGTGTAAATAT+AGG - chr3_1:19111110-19111129 Msa0351760:CDS 30.0%
TTCAGTGTAAATATAGGTGT+CGG - chr3_1:19111116-19111135 Msa0351760:CDS 30.0%
TGAGATGTAGATATTGGTAA+TGG - chr3_1:19111187-19111206 Msa0351760:CDS 30.0%
! ATGTCTTTAATCTGAAGTGT+CGG - chr3_1:19111285-19111304 Msa0351760:CDS 30.0%
TTAGATAGATTAGTAGTCAC+TGG + chr3_1:19111643-19111662 None:intergenic 30.0%
TTTGATATTGCGACAAAATG+CGG - chr3_1:19111763-19111782 Msa0351760:intron 30.0%
ACAGCCCTAATGTAATATAA+AGG + chr3_1:19111840-19111859 None:intergenic 30.0%
ATCCAAACAAAAGGAATTAC+AGG + chr3_1:19111890-19111909 None:intergenic 30.0%
TAACATGTGGTATGTTCAAT+TGG - chr3_1:19111973-19111992 Msa0351760:intron 30.0%
!!! TTTTTTTGCAGATCTTTGCT+TGG - chr3_1:19112272-19112291 Msa0351760:intron 30.0%
TATGGGAAGAAACACAAAAT+TGG - chr3_1:19112415-19112434 Msa0351760:intron 30.0%
AATATCATGAACACGATTCT+TGG + chr3_1:19112529-19112548 None:intergenic 30.0%
AATTTCTTTCTCAACAAGAG+AGG - chr3_1:19112576-19112595 Msa0351760:intron 30.0%
!!! TTTTTTGATAGTTTCCGAGA+TGG + chr3_1:19112650-19112669 None:intergenic 30.0%
AACTATCAAAAAACAAGCGT+CGG - chr3_1:19112657-19112676 Msa0351760:intron 30.0%
!! GTATTTCTTACCCACTTTTA+TGG - chr3_1:19112707-19112726 Msa0351760:intron 30.0%
AATCTTGATCCTATGATCAT+CGG - chr3_1:19112799-19112818 Msa0351760:intron 30.0%
! CCAATATCGGTTATAAAGTA+CGG + chr3_1:19112866-19112885 None:intergenic 30.0%
!! TCGGAAACTTTTTCCAATAT+CGG + chr3_1:19112879-19112898 None:intergenic 30.0%
!! GTTACTTCTTGATCTTGTTT+TGG - chr3_1:19112942-19112961 Msa0351760:intron 30.0%
TAAATTCGGAATTCCAAATG+AGG - chr3_1:19112981-19113000 Msa0351760:intron 30.0%
ATCCTATCATCAATAGTTAG+TGG - chr3_1:19113138-19113157 Msa0351760:CDS 30.0%
!!! TCAATAGTTAGTGGCTTTTT+TGG - chr3_1:19113147-19113166 Msa0351760:CDS 30.0%
!! TTACTACCTTTAAGATGGAT+TGG - chr3_1:19113255-19113274 Msa0351760:CDS 30.0%
! TTGGTTCGATTAATGCATAT+AGG - chr3_1:19113373-19113392 Msa0351760:CDS 30.0%
ATGATCAATTCTTACCTTTG+TGG - chr3_1:19113428-19113447 Msa0351760:CDS 30.0%
CTATGTTTGGATTCTTAACA+TGG - chr3_1:19113567-19113586 Msa0351760:exon 30.0%
ATTTCATGATCAATGTCCTA+AGG + chr3_1:19113651-19113670 None:intergenic 30.0%
! CAAAAGAGGTATGTTTGTAT+AGG - chr3_1:19113671-19113690 Msa0351760:five_prime_UTR 30.0%
TGAAGATACAAGTAAAACAC+CGG + chr3_1:19113721-19113740 None:intergenic 30.0%
ATAGCTAGAGTACATATCAA+AGG + chr3_1:19113823-19113842 None:intergenic 30.0%
! GATATGTACTCTAGCTATTT+TGG - chr3_1:19113825-19113844 Msa0351760:five_prime_UTR 30.0%
ATATTGTAGACAGTTCTACG+AGG + chr3_1:19110155-19110174 None:intergenic 35.0%
GAATAAAAGAGAGAGAAGAG+AGG + chr3_1:19110234-19110253 None:intergenic 35.0%
GATGCACTCATTGTACTTAT+TGG + chr3_1:19110308-19110327 None:intergenic 35.0%
TGTGTGTCAACCATAAATGT+AGG + chr3_1:19110585-19110604 None:intergenic 35.0%
GAGTGTGTTTATTGAGAAAG+AGG - chr3_1:19110653-19110672 Msa0351760:CDS 35.0%
GGTTCAAGTACTAGTCAAAT+TGG - chr3_1:19110693-19110712 Msa0351760:CDS 35.0%
TCAAGTACTAGTCAAATTGG+AGG - chr3_1:19110696-19110715 Msa0351760:CDS 35.0%
CAAGTACTAGTCAAATTGGA+GGG - chr3_1:19110697-19110716 Msa0351760:CDS 35.0%
TATTGTGTGGATTTGGGTAT+TGG - chr3_1:19110733-19110752 Msa0351760:CDS 35.0%
!! GATTTGGGTATTGGTTACAA+GGG - chr3_1:19110742-19110761 Msa0351760:CDS 35.0%
TGAAAATTAAGAGCAAGCCA+AGG + chr3_1:19110780-19110799 None:intergenic 35.0%
GTATTCTGCTAATCTTCCTA+TGG - chr3_1:19110848-19110867 Msa0351760:CDS 35.0%
TCAGAAAGAATTCCATAGAG+TGG + chr3_1:19110882-19110901 None:intergenic 35.0%
AGAATCCCTTACATTATCAC+TGG - chr3_1:19110927-19110946 Msa0351760:CDS 35.0%
! TACCTCCAGTGATAATGTAA+GGG + chr3_1:19110935-19110954 None:intergenic 35.0%
! ATACCTCCAGTGATAATGTA+AGG + chr3_1:19110936-19110955 None:intergenic 35.0%
GAAAGTGATTGAACGTAAAC+CGG - chr3_1:19111226-19111245 Msa0351760:CDS 35.0%
TTCCTAACTACTCACTTTAG+AGG + chr3_1:19111327-19111346 None:intergenic 35.0%
!! TCACAGCTTGTTACAGATAA+GGG + chr3_1:19111542-19111561 None:intergenic 35.0%
AGGTAACAACTCACAAGAAT+TGG - chr3_1:19111561-19111580 Msa0351760:CDS 35.0%
CATAATCCATAATGCATGTG+TGG - chr3_1:19111693-19111712 Msa0351760:CDS 35.0%
TCTTAACCACACATGCATTA+TGG + chr3_1:19111702-19111721 None:intergenic 35.0%
TAATGCATGTGTGGTTAAGA+TGG - chr3_1:19111702-19111721 Msa0351760:CDS 35.0%
! GACCTGTAATTCCTTTTGTT+TGG - chr3_1:19111885-19111904 Msa0351760:intron 35.0%
ATCAGACTGATCCAAACAAA+AGG + chr3_1:19111899-19111918 None:intergenic 35.0%
ACTCTTTCCATGTTAACATG+TGG - chr3_1:19111960-19111979 Msa0351760:intron 35.0%
GAACATACCACATGTTAACA+TGG + chr3_1:19111970-19111989 None:intergenic 35.0%
AGACATTAAGAAATGCAAGG+TGG - chr3_1:19112130-19112149 Msa0351760:intron 35.0%
GCAAAGATCTGCAAAAAAAC+TGG + chr3_1:19112271-19112290 None:intergenic 35.0%
ATCCATTACTGAAGTTGCAA+AGG - chr3_1:19112375-19112394 Msa0351760:intron 35.0%
ATCCTTTGCAACTTCAGTAA+TGG + chr3_1:19112380-19112399 None:intergenic 35.0%
TGCTAGTTGTACAGATAGTA+AGG + chr3_1:19112557-19112576 None:intergenic 35.0%
TCAACAAGAGAGGATTCTTT+AGG - chr3_1:19112586-19112605 Msa0351760:intron 35.0%
!! AGATTTAGAGTTGATGGTTG+TGG + chr3_1:19112616-19112635 None:intergenic 35.0%
! GTTGCAAGATTTAGAGTTGA+TGG + chr3_1:19112622-19112641 None:intergenic 35.0%
ATCCAACGATCCATAAAAGT+GGG + chr3_1:19112720-19112739 None:intergenic 35.0%
CTGTGTCTGATAGCAAAATA+TGG + chr3_1:19112773-19112792 None:intergenic 35.0%
CCGTACTTTATAACCGATAT+TGG - chr3_1:19112863-19112882 Msa0351760:intron 35.0%
GTTTAAACTCCTTCCTTTCT+CGG - chr3_1:19113047-19113066 Msa0351760:intron 35.0%
TTCGCAAATTTATGTCCGAA+AGG - chr3_1:19113075-19113094 Msa0351760:CDS 35.0%
! AGCCACTAACTATTGATGAT+AGG + chr3_1:19113143-19113162 None:intergenic 35.0%
! CAGCTTTACTACCTTTAAGA+TGG - chr3_1:19113250-19113269 Msa0351760:CDS 35.0%
ATCGAACCAATCCATCTTAA+AGG + chr3_1:19113264-19113283 None:intergenic 35.0%
AGAGTTGGAAAAGTTGTGAT+TGG - chr3_1:19113354-19113373 Msa0351760:CDS 35.0%
CATGATCATTAAAGCCACAA+AGG + chr3_1:19113445-19113464 None:intergenic 35.0%
AATGATCATGCAAGGATGAT+TGG - chr3_1:19113455-19113474 Msa0351760:CDS 35.0%
! ATTGTCAAAGGTGGTTTTTG+AGG - chr3_1:19113605-19113624 Msa0351760:five_prime_UTR 35.0%
AACAAGTGTCTTAACGACAT+TGG + chr3_1:19113758-19113777 None:intergenic 35.0%
! CACTTGTTAATAAGACCCTT+TGG - chr3_1:19113770-19113789 Msa0351760:five_prime_UTR 35.0%
!! GGATTTGGGTATTGGTTACA+AGG - chr3_1:19110741-19110760 Msa0351760:CDS 40.0%
!! GGTATTGGTTACAAGGGTTT+AGG - chr3_1:19110748-19110767 Msa0351760:CDS 40.0%
! AAGGGTTTAGGTGTTTTCCT+TGG - chr3_1:19110760-19110779 Msa0351760:CDS 40.0%
TTCTGCTAATCTTCCTATGG+TGG - chr3_1:19110851-19110870 Msa0351760:CDS 40.0%
ATCCCTTACATTATCACTGG+AGG - chr3_1:19110930-19110949 Msa0351760:CDS 40.0%
AGAAAAGGCAAAAGCTACGT+GGG + chr3_1:19110968-19110987 None:intergenic 40.0%
AATGAAACACAGACACTCCT+CGG + chr3_1:19111157-19111176 None:intergenic 40.0%
!! AGCCTCTAAAGTGAGTAGTT+AGG - chr3_1:19111322-19111341 Msa0351760:CDS 40.0%
!! CTCACAGCTTGTTACAGATA+AGG + chr3_1:19111543-19111562 None:intergenic 40.0%
CTTATCTGTAACAAGCTGTG+AGG - chr3_1:19111541-19111560 Msa0351760:CDS 40.0%
!! ATGGTTCTAATTTGCAGCCA+CGG - chr3_1:19111721-19111740 Msa0351760:intron 40.0%
AACTGCAATTACGGCTGTAT+TGG + chr3_1:19111790-19111809 None:intergenic 40.0%
TGGCACAACAACTGCAATTA+CGG + chr3_1:19111799-19111818 None:intergenic 40.0%
CTGAAGTAGGTTATCAGTTG+CGG + chr3_1:19111866-19111885 None:intergenic 40.0%
! AGGAATTACAGGTCTGAAGT+AGG + chr3_1:19111879-19111898 None:intergenic 40.0%
ATGCTCTTGTAGCTGAGTAT+GGG - chr3_1:19112398-19112417 Msa0351760:intron 40.0%
GGGAAGAAACACAAAATTGG+CGG - chr3_1:19112418-19112437 Msa0351760:intron 40.0%
GGAATCTTAGGCAACTTGAT+CGG - chr3_1:19112478-19112497 Msa0351760:intron 40.0%
ATCATGAACACGATTCTTGG+AGG + chr3_1:19112526-19112545 None:intergenic 40.0%
TCTTGCAACACAATCCATCT+CGG - chr3_1:19112633-19112652 Msa0351760:intron 40.0%
!! TACCCACTTTTATGGATCGT+TGG - chr3_1:19112715-19112734 Msa0351760:intron 40.0%
GATCCAACGATCCATAAAAG+TGG + chr3_1:19112721-19112740 None:intergenic 40.0%
TTGATCCTATGATCATCGGT+TGG - chr3_1:19112803-19112822 Msa0351760:intron 40.0%
TTTCCGATGAGAAACCTGAT+AGG - chr3_1:19112892-19112911 Msa0351760:intron 40.0%
ATAGGATCAAAGCTGATGCA+AGG + chr3_1:19113125-19113144 None:intergenic 40.0%
!!! GTTAGTGGCTTTTTTGGTGT+TGG - chr3_1:19113153-19113172 Msa0351760:CDS 40.0%
!!! TGGCTTTTTTGGTGTTGGAT+TGG - chr3_1:19113158-19113177 Msa0351760:CDS 40.0%
ATTACATCCGGTGATTACTC+AGG - chr3_1:19113195-19113214 Msa0351760:CDS 40.0%
ACCTATGTCACAGTCTGATT+CGG - chr3_1:19113284-19113303 Msa0351760:CDS 40.0%
TTAATGCATATAGGCGCGAA+AGG - chr3_1:19113382-19113401 Msa0351760:CDS 40.0%
TAATGCATATAGGCGCGAAA+GGG - chr3_1:19113383-19113402 Msa0351760:CDS 40.0%
!! GTGGCTTTAATGATCATGCA+AGG - chr3_1:19113447-19113466 Msa0351760:CDS 40.0%
TGTGAGCTAACAATGGCATA+AGG + chr3_1:19113506-19113525 None:intergenic 40.0%
!! AAAATCCTACGCTTTGAAGC+AGG + chr3_1:19113539-19113558 None:intergenic 40.0%
CTTTGACAATTCACAAGGTG+TGG + chr3_1:19113595-19113614 None:intergenic 40.0%
CACACCTTGTGAATTGTCAA+AGG - chr3_1:19113593-19113612 Msa0351760:five_prime_UTR 40.0%
ACCTTGTGAATTGTCAAAGG+TGG - chr3_1:19113596-19113615 Msa0351760:five_prime_UTR 40.0%
ACCACCTTTGACAATTCACA+AGG + chr3_1:19113600-19113619 None:intergenic 40.0%
GAATGCTAACATGTGTCCTT+AGG - chr3_1:19113632-19113651 Msa0351760:five_prime_UTR 40.0%
AAGTGTCTTAACGACATTGG+AGG + chr3_1:19113755-19113774 None:intergenic 40.0%
TAGACAGTTCTACGAGGTTG+TGG + chr3_1:19110149-19110168 None:intergenic 45.0%
TAGAGTGGTTTAGCCACCAT+AGG + chr3_1:19110867-19110886 None:intergenic 45.0%
ATGGTGGCTAAACCACTCTA+TGG - chr3_1:19110867-19110886 Msa0351760:CDS 45.0%
GAAAAGGCAAAAGCTACGTG+GGG + chr3_1:19110967-19110986 None:intergenic 45.0%
CAGAAAAGGCAAAAGCTACG+TGG + chr3_1:19110969-19110988 None:intergenic 45.0%
GATGAAGCACGTATACGACA+TGG - chr3_1:19111048-19111067 Msa0351760:CDS 45.0%
AAACCGGTAACCACATGTGT+TGG - chr3_1:19111242-19111261 Msa0351760:CDS 45.0%
ACACCAACACATGTGGTTAC+CGG + chr3_1:19111248-19111267 None:intergenic 45.0%
TGACACAACACCAACACATG+TGG + chr3_1:19111255-19111274 None:intergenic 45.0%
!! TAGTAGTCACTGGCTTTGCT+TGG + chr3_1:19111633-19111652 None:intergenic 45.0%
!!! GGTTTTAGAGGTCACTACGA+TGG + chr3_1:19111819-19111838 None:intergenic 45.0%
AAGCACAGCTGCAACTAAGA+CGG + chr3_1:19112338-19112357 None:intergenic 45.0%
AGCTGTGCTTCTCAGTAACT+TGG - chr3_1:19112348-19112367 Msa0351760:intron 45.0%
GCTGTGCTTCTCAGTAACTT+GGG - chr3_1:19112349-19112368 Msa0351760:intron 45.0%
GATGCTCTTGTAGCTGAGTA+TGG - chr3_1:19112397-19112416 Msa0351760:intron 45.0%
CCATGAACGCGTATGATTGT+AGG + chr3_1:19112444-19112463 None:intergenic 45.0%
CCTACAATCATACGCGTTCA+TGG - chr3_1:19112441-19112460 Msa0351760:intron 45.0%
ATCTTAGGCAACTTGATCGG+TGG - chr3_1:19112481-19112500 Msa0351760:intron 45.0%
!!! ACAAGCGTCGGATCTTTTTG+TGG - chr3_1:19112669-19112688 Msa0351760:intron 45.0%
TGCCACTGTTCCAATGCTTA+CGG - chr3_1:19112744-19112763 Msa0351760:intron 45.0%
AATATGGAGCCCGTAAGCAT+TGG + chr3_1:19112757-19112776 None:intergenic 45.0%
CTAGACCAACCGATGATCAT+AGG + chr3_1:19112811-19112830 None:intergenic 45.0%
!! ATCGGTTGGTCTAGAGTGAT+TGG - chr3_1:19112817-19112836 Msa0351760:intron 45.0%
! GGTCAGTTGATGCTTCTTTC+AGG - chr3_1:19112838-19112857 Msa0351760:intron 45.0%
GAAGTAACGACGAAGCGTAT+AGG + chr3_1:19112930-19112949 None:intergenic 45.0%
TTTGCGAACAGAACCGAGAA+AGG + chr3_1:19113063-19113082 None:intergenic 45.0%
TCTTTGCTCGGCATTACATC+CGG - chr3_1:19113183-19113202 Msa0351760:CDS 45.0%
AGTCAAGCCTGAGTAATCAC+CGG + chr3_1:19113205-19113224 None:intergenic 45.0%
TGATTACTCAGGCTTGACTG+TGG - chr3_1:19113206-19113225 Msa0351760:CDS 45.0%
GATTACTCAGGCTTGACTGT+GGG - chr3_1:19113207-19113226 Msa0351760:CDS 45.0%
TCCGAATCAGACTGTGACAT+AGG + chr3_1:19113288-19113307 None:intergenic 45.0%
ATATAGGCGCGAAAGGGAAT+GGG - chr3_1:19113389-19113408 Msa0351760:CDS 45.0%
AAAGGGAATGGGAATCGCAA+AGG - chr3_1:19113400-19113419 Msa0351760:CDS 45.0%
CAACTCGTGTGAGCTAACAA+TGG + chr3_1:19113513-19113532 None:intergenic 45.0%
!! GTCAAAGGTGGTTTTTGAGG+AGG - chr3_1:19113608-19113627 Msa0351760:five_prime_UTR 45.0%
!! ATATAGGTGTCGGTGTCGTG+TGG - chr3_1:19111126-19111145 Msa0351760:CDS 50.0%
! CTAATTTGCAGCCACGGTTG+CGG - chr3_1:19111727-19111746 Msa0351760:intron 50.0%
TAAGCACTTCACGTGCAGCA+GGG + chr3_1:19112315-19112334 None:intergenic 50.0%
TTAGCCGCAGGTGGAATCTT+AGG - chr3_1:19112466-19112485 Msa0351760:intron 50.0%
GTTGCCTAAGATTCCACCTG+CGG + chr3_1:19112473-19112492 None:intergenic 50.0%
GCCACTGTTCCAATGCTTAC+GGG - chr3_1:19112745-19112764 Msa0351760:intron 50.0%
GCGCCTATCAGGTTTCTCAT+CGG + chr3_1:19112898-19112917 None:intergenic 50.0%
CAAGGAGCGAACACCTCATT+TGG + chr3_1:19112997-19113016 None:intergenic 50.0%
!! GGTGTTCGCTCCTTGCTTTT+CGG - chr3_1:19113002-19113021 Msa0351760:intron 50.0%
!! GTGTTCGCTCCTTGCTTTTC+GGG - chr3_1:19113003-19113022 Msa0351760:intron 50.0%
TCTGCCAAACCCGAAAAGCA+AGG + chr3_1:19113015-19113034 None:intergenic 50.0%
CGAACAGAACCGAGAAAGGA+AGG + chr3_1:19113059-19113078 None:intergenic 50.0%
TTATGTCCGAAAGGCTGCGA+AGG - chr3_1:19113084-19113103 Msa0351760:CDS 50.0%
AGAGATCCTTCGCAGCCTTT+CGG + chr3_1:19113093-19113112 None:intergenic 50.0%
!! GTTGGATTGGCCTCTTTGCT+CGG - chr3_1:19113171-19113190 Msa0351760:CDS 50.0%
GGATGTAATGCCGAGCAAAG+AGG + chr3_1:19113184-19113203 None:intergenic 50.0%
GCGCGTAGAAACAGAAGAGT+TGG - chr3_1:19113339-19113358 Msa0351760:CDS 50.0%
CATATAGGCGCGAAAGGGAA+TGG - chr3_1:19113388-19113407 Msa0351760:CDS 50.0%
!! ATCCTACGCTTTGAAGCAGG+AGG + chr3_1:19113536-19113555 None:intergenic 50.0%
TTCTACGAGGTTGTGGCGAG+TGG + chr3_1:19110142-19110161 None:intergenic 55.0%
TTGCAGCATAACCGCAACCG+TGG + chr3_1:19111741-19111760 None:intergenic 55.0%
GTAAGCACTTCACGTGCAGC+AGG + chr3_1:19112316-19112335 None:intergenic 55.0%
TTCATGGCATTAGCCGCAGG+TGG - chr3_1:19112457-19112476 Msa0351760:intron 55.0%
!! GCCCGTAAGCATTGGAACAG+TGG + chr3_1:19112749-19112768 None:intergenic 55.0%
!!! CGCTCCTTGCTTTTCGGGTT+TGG - chr3_1:19113008-19113027 Msa0351760:intron 55.0%
TGCCTCCTGCTTCAAAGCGT+AGG - chr3_1:19113531-19113550 Msa0351760:CDS 55.0%
! GGTGTCGTGTGGCTAATCCG+AGG - chr3_1:19111137-19111156 Msa0351760:CDS 60.0%
GCGTTCATGGCATTAGCCGC+AGG - chr3_1:19112454-19112473 Msa0351760:intron 60.0%
GGATCTGCACTGCGCCTATC+AGG + chr3_1:19112909-19112928 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 19110132 19113875 19110132 ID=Msa0351760;Name=Msa0351760
chr3_1 mRNA 19110132 19113875 19110132 ID=Msa0351760-mRNA-1;Parent=Msa0351760;Name=Msa0351760-mRNA-1;_AED=0.00;_eAED=0.00;_QI=303|1|1|1|1|1|2|450|556
chr3_1 exon 19110132 19111735 19110132 ID=Msa0351760-mRNA-1:exon:4485;Parent=Msa0351760-mRNA-1
chr3_1 exon 19113056 19113875 19113056 ID=Msa0351760-mRNA-1:exon:4484;Parent=Msa0351760-mRNA-1
chr3_1 five_prime_UTR 19113573 19113875 19113573 ID=Msa0351760-mRNA-1:five_prime_utr;Parent=Msa0351760-mRNA-1
chr3_1 CDS 19113056 19113572 19113056 ID=Msa0351760-mRNA-1:cds;Parent=Msa0351760-mRNA-1
chr3_1 CDS 19110582 19111735 19110582 ID=Msa0351760-mRNA-1:cds;Parent=Msa0351760-mRNA-1
chr3_1 three_prime_UTR 19110132 19110581 19110132 ID=Msa0351760-mRNA-1:three_prime_utr;Parent=Msa0351760-mRNA-1
Gene Sequence

>Msa0351760

ATGATTCATCTTGCAATTTCATCACAAAAGAATCCATTGGTGATTATTAACAAACCAAATTTACACAAACATCACAAAAGACCAATCATAACATGTTCACAACATCACAAGAATTCAAGAAACTTCATTGAGAAACAATCTCAACAACCTACATTTATGGTTGACACACATAAAAATTTTGTTGTGAGAGAGAATAAGAAAAAGAAGGAAGAGGAGAAGAGTGTGTTTATTGAGAAAGAGGAGAATAAGAAGAAAAAGGGTTCAAGTACTAGTCAAATTGGAGGGAAACAAATGCTTATATTGTGTGGATTTGGGTATTGGTTACAAGGGTTTAGGTGTTTTCCTTGGCTTGCTCTTAATTTTCATATGGCTAGTAATCTCAATTTGGACCCTTCAATATTGCAACTTGTACAGTATTCTGCTAATCTTCCTATGGTGGCTAAACCACTCTATGGAATTCTTTCTGATGTTATCTATATTGGTGGTGCTCACAGAATCCCTTACATTATCACTGGAGTTTTTTTGCAGATCTTTGCTTGGAATTATCTAGCATTCGTCCCTGCTGCACGTGAAGTGCTTACCGTCTTAGTTGCAGCTGTGCTTCTCAGTAACTTGGGAGCATCCATTACTGAAGTTGCAAAGGATGCTCTTGTAGCTGAGTATGGGAAGAAACACAAAATTGGCGGCCTACAATCATACGCGTTCATGGCATTAGCCGCAGGTGGAATCTTAGGCAACTTGATCGGTGGTTATTTTCTACTGAAACTGCCTCCAAGAATCGTGTTCATGATATTTTCAGCCTTACTATCTGTACAACTAGCAATTTCTTTCTCAACAAGAGAGGATTCTTTAGGCATACCACAACCATCAACTCTAAATCTTGCAACACAATCCATCTCGGAAACTATCAAAAAACAAGCGTCGGATCTTTTTGTGGCTATCAGCGACAAAAGTATTTCTTACCCACTTTTATGGATCGTTGGATCAATTGCCACTGTTCCAATGCTTACGGGCTCCATATTTTGCTATCAGACACAGTGTCTAAATCTTGATCCTATGATCATCGGTTGGTCTAGAGTGATTGGTCAGTTGATGCTTCTTTCAGGAACCGTACTTTATAACCGATATTGGAAAAAGTTTCCGATGAGAAACCTGATAGGCGCAGTGCAGATCCTATACGCTTCGTCGTTACTTCTTGATCTTGTTTTGGTTAGACAGATAAATCTTAAATTCGGAATTCCAAATGAGGTGTTCGCTCCTTGCTTTTCGGGTTTGGCAGAAGTTCTAGCACAGTTTAAACTCCTTCCTTTCTCGGTTCTGTTCGCAAATTTATGTCCGAAAGGCTGCGAAGGATCTCTCATCTCTTTCCTTGCATCAGCTTTGATCCTATCATCAATAGTTAGTGGCTTTTTTGGTGTTGGATTGGCCTCTTTGCTCGGCATTACATCCGGTGATTACTCAGGCTTGACTGTGGGAATTCTTATACAGTTTGTCGCAGCTTTACTACCTTTAAGATGGATTGGTTCGATACCTATGTCACAGTCTGATTCGGAGAAGCAAAGAAGAAAAAGTATGAGTAGAAGAGCGCGTAGAAACAGAAGAGTTGGAAAAGTTGTGATTGGTTCGATTAATGCATATAGGCGCGAAAGGGAATGGGAATCGCAAAGGTGA

Protein sequence

>Msa0351760

MIHLAISSQKNPLVIINKPNLHKHHKRPIITCSQHHKNSRNFIEKQSQQPTFMVDTHKNFVVRENKKKKEEEKSVFIEKEENKKKKGSSTSQIGGKQMLILCGFGYWLQGFRCFPWLALNFHMASNLNLDPSILQLVQYSANLPMVAKPLYGILSDVIYIGGAHRIPYIITGVFLQIFAWNYLAFVPAAREVLTVLVAAVLLSNLGASITEVAKDALVAEYGKKHKIGGLQSYAFMALAAGGILGNLIGGYFLLKLPPRIVFMIFSALLSVQLAISFSTREDSLGIPQPSTLNLATQSISETIKKQASDLFVAISDKSISYPLLWIVGSIATVPMLTGSIFCYQTQCLNLDPMIIGWSRVIGQLMLLSGTVLYNRYWKKFPMRNLIGAVQILYASSLLLDLVLVRQINLKFGIPNEVFAPCFSGLAEVLAQFKLLPFSVLFANLCPKGCEGSLISFLASALILSSIVSGFFGVGLASLLGITSGDYSGLTVGILIQFVAALLPLRWIGSIPMSQSDSEKQRRKSMSRRARRNRRVGKVVIGSINAYRREREWESQR*