AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0365510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365510 MtrunA17_Chr3g0105811 97.946 925 19 0 1 925 1 925 0.0 1881
Msa0365510 MtrunA17_Chr4g0005681 58.404 940 371 9 1 922 9 946 0.0 1109
Msa0365510 MtrunA17_Chr7g0243131 64.774 687 242 0 236 922 1 687 0.0 942
Msa0365510 MtrunA17_Chr1g0185181 47.535 852 421 6 74 920 51 881 0.0 787
Msa0365510 MtrunA17_Chr7g0243111 44.211 190 95 3 1 183 9 194 1.90e-38 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365510 AT3G51770.2 59.748 954 348 8 1 924 9 956 0.0 1157
Msa0365510 AT3G51770.1 59.748 954 348 8 1 924 1 948 0.0 1156
Msa0365510 AT5G58550.1 56.587 926 378 7 1 919 1 909 0.0 1031
Msa0365510 AT4G02680.1 48.531 851 416 5 74 920 51 883 0.0 780

Find 172 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACACACCTTGATCCTTTA+AGG 0.060854 3_1:+59682316 Msa0365510:CDS
CTACAAGGTTGATTGGTTTA+AGG 0.163869 3_1:-59679643 None:intergenic
AAGGAAAAGTTGGAAAATTT+AGG 0.184841 3_1:+59680511 Msa0365510:CDS
GCAAATAAAGGAAGGGATTA+TGG 0.210325 3_1:+59680990 Msa0365510:CDS
CCAAAGAAGAATTTGGAAAA+TGG 0.220561 3_1:+59679929 Msa0365510:CDS
TACAATATGGGAAGAGAAAA+AGG 0.232145 3_1:+59680883 Msa0365510:CDS
TCCAATGCTCTATATTTATA+CGG 0.234438 3_1:-59680952 None:intergenic
TGAATGTCCAAAGAAGAATT+TGG 0.244879 3_1:+59679922 Msa0365510:CDS
AGTTCAACACTTTAGCTTAA+AGG 0.245361 3_1:+59679349 Msa0365510:five_prime_UTR
CAGTGATCATTAATTGAAAA+AGG 0.250740 3_1:-59679959 None:intergenic
CGTTGATGATGTTGGTTCTT+TGG 0.260043 3_1:+59681260 Msa0365510:CDS
ATCTTCTTGTGATTCTCATT+TGG 0.274382 3_1:+59680324 Msa0365510:CDS
AGCTTCTGTCATTTGCTAAT+AGG 0.284678 3_1:+59680281 Msa0365510:CDS
ATGGAGTTAGATAAGTTTCT+AGG 0.286460 3_1:+59681009 Msa0365510:CDS
GCATTGATACTTATTGAGTA+TGG 0.289441 3_1:+59680373 Msa0365510:CDS
AACTTTGAATGAAAATAAAC+TGG 0.292569 3_1:-59679330 None:intergenic
ATTAACTTATAAGCCGAATA+TGG 0.292646 3_1:-59680802 None:intergenic
AGGAAAAGTTGGAAAATTTA+GGG 0.292799 3_1:+59680512 Msa0365510:CDS
TTTGATGAAGCGGTTGAATT+AGG 0.296029 3_1:+59680727 Msa0365510:CDS
CCTGCTGCCCTGTATCTATA+AGG 0.297319 3_1:-59682345 None:intergenic
GTTCAACACTTTAGCTTAAA+GGG 0.306153 3_1:+59679350 Msa0365510:five_prime_UTR
CTATAAGGGTATGTCCTTAA+AGG 0.309106 3_1:-59682330 None:intergenic
AGAGAGAGCATTGTACAATA+TGG 0.319911 3_1:+59680870 Msa0365510:CDS
TTTGTTTATAGTATCAAATA+TGG 0.323757 3_1:+59683029 Msa0365510:three_prime_UTR
ACCTGATTGTTTAGAGTTGA+GGG 0.350604 3_1:+59681044 Msa0365510:CDS
CAAAGAAGAATTTGGAAAAT+GGG 0.354347 3_1:+59679930 Msa0365510:CDS
TCTCATTTGGCTTCAATTGT+TGG 0.360828 3_1:+59680337 Msa0365510:CDS
AACTCTAGCAGGCTCTTTCC+AGG 0.361101 3_1:-59681312 None:intergenic
AGTTATGTAATTAGCCTCTA+TGG 0.365662 3_1:-59681130 None:intergenic
ATAACATAAGAAGAAGATTC+AGG 0.375878 3_1:-59681896 None:intergenic
TTAAGGCAAGGTTCTATAGA+TGG 0.381064 3_1:-59679626 None:intergenic
AAATGATTTCTGAATTTCAA+TGG 0.382753 3_1:-59681825 None:intergenic
AGTTCTTCATCTGAAACTAA+TGG 0.389641 3_1:+59679458 Msa0365510:CDS
AATATAAACCTTTGAGAAAA+GGG 0.390822 3_1:-59679299 None:intergenic
TTTGAATTATGAAGCGAATT+CGG 0.390936 3_1:-59680457 None:intergenic
TAAACAAGGTCAACCATATT+CGG 0.393755 3_1:+59680789 Msa0365510:CDS
AGAAGCTCTAAAACAGTATT+GGG 0.396365 3_1:-59680265 None:intergenic
AAATATAAACCTTTGAGAAA+AGG 0.397426 3_1:-59679300 None:intergenic
CACCTGATTGTTTAGAGTTG+AGG 0.398050 3_1:+59681043 Msa0365510:CDS
AAAGTCTCTACAAGGTTGAT+TGG 0.404114 3_1:-59679650 None:intergenic
TGCAATGCGCAGTTTGCGGC+TGG 0.409116 3_1:+59681700 Msa0365510:CDS
ATGAAGAAATCAAGTGTGTT+AGG 0.411575 3_1:+59680080 Msa0365510:CDS
AGATGAAGCATTTGAAGATC+TGG 0.417480 3_1:-59682804 None:intergenic
ACAACAATGCACTTGCGATT+AGG 0.421565 3_1:+59682121 Msa0365510:CDS
AGTCGAGGAGAAGCAAATAA+AGG 0.422463 3_1:+59680978 Msa0365510:CDS
TCTGTTAACGTTGTGAGGTT+TGG 0.428615 3_1:-59679492 None:intergenic
CATGGTTAAGATTTGAAAGA+AGG 0.429469 3_1:+59679846 Msa0365510:CDS
CAGAAGCTCTAAAACAGTAT+TGG 0.429864 3_1:-59680266 None:intergenic
GGATGGATTCTATATGATAC+TGG 0.433850 3_1:+59681767 Msa0365510:CDS
TAGAATTCAGAAGAAGAATC+AGG 0.435527 3_1:+59681200 Msa0365510:CDS
GAGGATCAAAGGTGAATGTT+TGG 0.435726 3_1:+59681161 Msa0365510:CDS
GGACATACCCTTATAGATAC+AGG 0.436012 3_1:+59682337 Msa0365510:CDS
AGCTATACATTGGATGAATC+AGG 0.436130 3_1:+59682980 Msa0365510:three_prime_UTR
GGCCATGTTTATTCTATAGC+AGG 0.437661 3_1:+59680748 Msa0365510:CDS
ACTTGTTGGTGTTTGTTCAA+TGG 0.438005 3_1:+59679877 Msa0365510:CDS
GACATCTTCTGAGTAACTTC+TGG 0.440906 3_1:-59679769 None:intergenic
TGCTTTCTTCCATTGCCACC+TGG 0.443243 3_1:-59680567 None:intergenic
AGGCTGCAATGCGCAGTTTG+CGG 0.457525 3_1:+59681696 Msa0365510:CDS
ATTGTTTAGAGTTGAGGGCT+TGG 0.457835 3_1:+59681049 Msa0365510:CDS
CCACAAAGCATTGCATTCAA+TGG 0.458652 3_1:-59680127 None:intergenic
TATAAAGAGATTCATACCTC+TGG 0.467553 3_1:+59683204 Msa0365510:three_prime_UTR
GAAAACAACAGCGATGTTGT+TGG 0.467904 3_1:+59680597 Msa0365510:CDS
GCTAATTACATAACTTTACA+TGG 0.469791 3_1:+59681138 Msa0365510:CDS
TAGAGCTTTGTTAACCATAG+AGG 0.473166 3_1:+59681116 Msa0365510:CDS
GCCCTCAACTCTAAACAATC+AGG 0.478669 3_1:-59681045 None:intergenic
AGAAGAATCAGGCTGATTGT+TGG 0.481618 3_1:+59681211 Msa0365510:CDS
GAGAGAGCATTGTACAATAT+GGG 0.482919 3_1:+59680871 Msa0365510:CDS
CTGCTGCCCTGTATCTATAA+GGG 0.484423 3_1:-59682344 None:intergenic
TGTAACTTGTATAACTGATC+AGG 0.484904 3_1:-59678992 None:intergenic
CACAAGAGCTCATCAAGGTC+TGG 0.485931 3_1:+59682146 Msa0365510:CDS
TAACATGGGGAGTATTTATG+TGG 0.495928 3_1:+59682065 Msa0365510:CDS
GATACTTATTGAGTATGGAT+TGG 0.496423 3_1:+59680378 Msa0365510:CDS
AGAGGCTAATTTATGAAGGA+TGG 0.497913 3_1:+59681750 Msa0365510:CDS
TCTCCTGCATTGAGGTGGAA+TGG 0.502258 3_1:-59681730 None:intergenic
CCATTGAATGCAATGCTTTG+TGG 0.503790 3_1:+59680127 Msa0365510:CDS
CAGATGCTAGAGAATGAGCC+TGG 0.507226 3_1:+59681294 Msa0365510:CDS
GACAATGCTGATTGAGAAAG+CGG 0.508703 3_1:+59682218 Msa0365510:CDS
CATCAACGGAAGACCATTGT+TGG 0.513844 3_1:-59681245 None:intergenic
AGCAGTAGAAGAACTCACTA+AGG 0.514403 3_1:+59682767 Msa0365510:CDS
TCCGTATAAATATAGAGCAT+TGG 0.515494 3_1:+59680951 Msa0365510:CDS
CTAAAGATGCTTACCTCAAG+AGG 0.517512 3_1:-59681350 None:intergenic
GGTAATGGATTATGCTCAGA+AGG 0.523902 3_1:+59680190 Msa0365510:CDS
GCACAGATTAAACTGTCAAA+AGG 0.527141 3_1:+59681676 Msa0365510:intron
AACAAGATTTGCAAATTCTG+AGG 0.534851 3_1:-59679570 None:intergenic
GACACAGAACAATATTGTCT+TGG 0.535289 3_1:+59679513 Msa0365510:CDS
AGGTTGATTGGTTTAAGGCA+AGG 0.538260 3_1:-59679638 None:intergenic
ACTTTACATGGGAGGATCAA+AGG 0.539277 3_1:+59681150 Msa0365510:CDS
GTCTGTCGCTACTCCTCTTG+AGG 0.540305 3_1:+59681337 Msa0365510:CDS
AAACCATTCCACCTCAATGC+AGG 0.545159 3_1:+59681727 Msa0365510:CDS
GGTATGTCCTTAAAGGATCA+AGG 0.546574 3_1:-59682323 None:intergenic
CCTTATAGATACAGGGCAGC+AGG 0.549665 3_1:+59682345 Msa0365510:CDS
TTTGCAGGCATTGAATAACA+TGG 0.549951 3_1:+59682050 Msa0365510:intron
AAGAGTGTGCTTCAGAGAGA+TGG 0.553080 3_1:+59680629 Msa0365510:CDS
GTTTATAGTATCAAATATGG+AGG 0.553533 3_1:+59683032 Msa0365510:three_prime_UTR
TGCTTCAGAGAGATGGCAGA+AGG 0.553921 3_1:+59680636 Msa0365510:CDS
TTGCAGGCATTGAATAACAT+GGG 0.554480 3_1:+59682051 Msa0365510:intron
ATGGTTAAGATTTGAAAGAA+GGG 0.554533 3_1:+59679847 Msa0365510:CDS
CAGGAGAGGCTAATTTATGA+AGG 0.554998 3_1:+59681746 Msa0365510:CDS
GGTTCAATAGTGTCAGTTGA+AGG 0.555143 3_1:-59679605 None:intergenic
ATCGTGACGAGGCTGTTACA+AGG 0.556551 3_1:+59681792 Msa0365510:CDS
GCATATATGACTAGTGCTGA+TGG 0.557153 3_1:+59682725 Msa0365510:intron
CAAAGGTTGTGTTGTCTGCA+TGG 0.557480 3_1:+59679828 Msa0365510:CDS
TCAAGTGTGGCTGCATGGGT+TGG 0.559007 3_1:-59682903 None:intergenic
CTGTGTCTGTTAACGTTGTG+AGG 0.560413 3_1:-59679497 None:intergenic
ATGTAATGTAACTGTACAAG+AGG 0.565524 3_1:-59683178 None:intergenic
TAAATCAAGTGTGGCTGCAT+GGG 0.565537 3_1:-59682907 None:intergenic
GGTGTTTGTTCAATGGATTG+TGG 0.568555 3_1:+59679884 Msa0365510:CDS
TGCCACTTTCTGAGCATAGG+AGG 0.570883 3_1:+59678965 Msa0365510:five_prime_UTR
ACTTTGAATGAAAATAAACT+GGG 0.573805 3_1:-59679329 None:intergenic
AAACTCAAGAAGCTATACAT+TGG 0.574044 3_1:+59682970 Msa0365510:three_prime_UTR
TAGTGCCACTTTCTGAGCAT+AGG 0.576848 3_1:+59678962 Msa0365510:five_prime_UTR
CCACACTTGATTTATATCAA+AGG 0.577105 3_1:+59682916 Msa0365510:CDS
GGTCTTGCATTGCATCAACT+AGG 0.577309 3_1:+59680658 Msa0365510:CDS
GGGAGTATTTATGTGGATTG+TGG 0.580648 3_1:+59682072 Msa0365510:CDS
GAGGAGAAGCAAATAAAGGA+AGG 0.581506 3_1:+59680982 Msa0365510:CDS
AACCTCCTATGCTCAGAAAG+TGG 0.581641 3_1:-59678967 None:intergenic
TGGATGAATCAGGAGAAAGA+TGG 0.581728 3_1:+59682990 Msa0365510:three_prime_UTR
GAATTCGCTTCATAATTCAA+AGG 0.583357 3_1:+59680459 Msa0365510:CDS
TGTTTATTCTATAGCAGGTG+TGG 0.583507 3_1:+59680753 Msa0365510:CDS
AGAATACTGTGATCGTGAGA+TGG 0.587940 3_1:+59682272 Msa0365510:CDS
GCGACAGACGAAACTCTAGC+AGG 0.588210 3_1:-59681323 None:intergenic
TCTTGATACATCCAACCGAC+TGG 0.590177 3_1:-59680850 None:intergenic
ACAATAGTATGTATATACAT+TGG 0.593778 3_1:+59683084 Msa0365510:three_prime_UTR
TCGAGTATAAACCAGTCGGT+TGG 0.595194 3_1:+59680839 Msa0365510:CDS
TGGTCTTCCGTTGATGATGT+TGG 0.597719 3_1:+59681252 Msa0365510:CDS
ATGTGTTTGTTTGTCAGATG+AGG 0.597849 3_1:+59680030 Msa0365510:CDS
AATGATGAATGATCTGAACT+TGG 0.598053 3_1:-59679165 None:intergenic
GTCTTGCATTGCATCAACTA+GGG 0.598742 3_1:+59680659 Msa0365510:CDS
CGCGGAAGATGTGATGTCAA+AGG 0.599465 3_1:+59679811 Msa0365510:CDS
TCGTGACGAGGCTGTTACAA+GGG 0.600278 3_1:+59681793 Msa0365510:CDS
TAGCCTCTCCTGCATTGAGG+TGG 0.600521 3_1:-59681735 None:intergenic
TTGAATGCAATGCTTTGTGG+TGG 0.602718 3_1:+59680130 Msa0365510:CDS
AATTAGCCTCTCCTGCATTG+AGG 0.603715 3_1:-59681738 None:intergenic
CCTTTGCGAAGTCCGTCTGA+AGG 0.604404 3_1:-59681947 None:intergenic
GGATGCAATTATACCAACAA+TGG 0.606647 3_1:+59681232 Msa0365510:CDS
ATAAATCAAGTGTGGCTGCA+TGG 0.607359 3_1:-59682908 None:intergenic
TGGTAAAATAGAACTTGCAA+AGG 0.609009 3_1:+59682092 Msa0365510:CDS
GTTTGTTCAATGGATTGTGG+TGG 0.609723 3_1:+59679887 Msa0365510:CDS
TAGAGCATTGGAGAAAGTCG+AGG 0.609855 3_1:+59680963 Msa0365510:CDS
AAGAAATCAAGTGTGTTAGG+TGG 0.610352 3_1:+59680083 Msa0365510:CDS
ATTACATAACTTTACATGGG+AGG 0.612020 3_1:+59681142 Msa0365510:CDS
AGAAGGGATGATGAACTTGT+TGG 0.612740 3_1:+59679863 Msa0365510:CDS
GATTTCTAGAATCCAAAATG+TGG 0.618681 3_1:+59680152 Msa0365510:CDS
GACATACCCTTATAGATACA+GGG 0.619740 3_1:+59682338 Msa0365510:CDS
TGCAGGCATTGAATAACATG+GGG 0.620435 3_1:+59682052 Msa0365510:intron
CTAATTACATAACTTTACAT+GGG 0.634474 3_1:+59681139 Msa0365510:CDS
ACATTGGTATATATATCATG+TGG 0.634650 3_1:+59683100 Msa0365510:three_prime_UTR
TTATACGGAAATGAAAGTGA+AGG 0.637799 3_1:-59680937 None:intergenic
CAAAGAACCAACATCATCAA+CGG 0.639146 3_1:-59681259 None:intergenic
AGGCACACAAGAGCTCATCA+AGG 0.640321 3_1:+59682141 Msa0365510:CDS
TAGAAATGCGCGGCAGAACG+CGG 0.641816 3_1:+59679793 Msa0365510:CDS
GTTCTGCTAAAGTCTCTACA+AGG 0.642685 3_1:-59679658 None:intergenic
CACCTGCTATAGAATAAACA+TGG 0.645929 3_1:-59680750 None:intergenic
CTTTAGCAGAACTCTATCAA+CGG 0.647850 3_1:+59679669 Msa0365510:CDS
GCACTTAAATGTCCTTCAGA+CGG 0.647907 3_1:+59681935 Msa0365510:CDS
GAAGATGTCTTAGAAATGCG+CGG 0.652556 3_1:+59679783 Msa0365510:CDS
GAAAGCGGAGAGTAATGCCT+CGG 0.653499 3_1:+59682233 Msa0365510:CDS
CCTTCAGACGGACTTCGCAA+AGG 0.656665 3_1:+59681947 Msa0365510:CDS
GCTTCAGAGAGATGGCAGAA+GGG 0.656862 3_1:+59680637 Msa0365510:CDS
ATTCCACCTCAATGCAGGAG+AGG 0.663137 3_1:+59681732 Msa0365510:CDS
AGGAGAAGCAAATAAAGGAA+GGG 0.664981 3_1:+59680983 Msa0365510:CDS
TGATACTGGCTATCGTGACG+AGG 0.668197 3_1:+59681781 Msa0365510:CDS
GTAATGGATTATGCTCAGAA+GGG 0.673024 3_1:+59680191 Msa0365510:CDS
TTTGAATGAAAATAAACTGG+GGG 0.673405 3_1:-59679327 None:intergenic
CCTTTGATATAAATCAAGTG+TGG 0.677348 3_1:-59682916 None:intergenic
CTGTGATCGTGAGATGGCGA+AGG 0.680984 3_1:+59682278 Msa0365510:CDS
TATGCATTGTAGGAAACCAG+AGG 0.694031 3_1:-59683220 None:intergenic
GCTAGAACAAAGCATAAACA+AGG 0.694172 3_1:+59680775 Msa0365510:CDS
TGATCGTTTCTCATACGCCG+AGG 0.694270 3_1:-59682250 None:intergenic
TCCCATTGACTCGTAAAACG+CGG 0.712479 3_1:-59682832 None:intergenic
ATATTCGAGTATAAACCAGT+CGG 0.714478 3_1:+59680835 Msa0365510:CDS
CTTTGAATGAAAATAAACTG+GGG 0.730800 3_1:-59679328 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTAATAATGTATGTTTT+TGG - chr3_1:59679096-59679115 None:intergenic 15.0%
!!! TGATAAACGATTATTTTATA+AGG - chr3_1:59682415-59682434 None:intergenic 15.0%
!! TTTGTTTATAGTATCAAATA+TGG + chr3_1:59683029-59683048 Msa0365510:three_prime_UTR 15.0%
!!! AATATAAACCTTTGAGAAAA+GGG - chr3_1:59679302-59679321 None:intergenic 20.0%
!!! AAATATAAACCTTTGAGAAA+AGG - chr3_1:59679303-59679322 None:intergenic 20.0%
!! ACTTTGAATGAAAATAAACT+GGG - chr3_1:59679332-59679351 None:intergenic 20.0%
!! AACTTTGAATGAAAATAAAC+TGG - chr3_1:59679333-59679352 None:intergenic 20.0%
!!! AAAATCAATTTTCCACATTT+TGG - chr3_1:59680167-59680186 None:intergenic 20.0%
!!! AAAATTGATTTTTCAGGTAA+TGG + chr3_1:59680175-59680194 Msa0365510:CDS 20.0%
!! CTAATTACATAACTTTACAT+GGG + chr3_1:59681139-59681158 Msa0365510:CDS 20.0%
!! AAATGATTTCTGAATTTCAA+TGG - chr3_1:59681828-59681847 None:intergenic 20.0%
!! CTACAACAAAATATAAAAGA+AGG + chr3_1:59682449-59682468 Msa0365510:intron 20.0%
!!! AAGCTATCTTGAAAATTTTA+TGG + chr3_1:59682509-59682528 Msa0365510:intron 20.0%
!! ATAATAATCGCTTATTTCAA+AGG - chr3_1:59682689-59682708 None:intergenic 20.0%
!! ACAATAGTATGTATATACAT+TGG + chr3_1:59683084-59683103 Msa0365510:three_prime_UTR 20.0%
! TTTGAATGAAAATAAACTGG+GGG - chr3_1:59679330-59679349 None:intergenic 25.0%
! CTTTGAATGAAAATAAACTG+GGG - chr3_1:59679331-59679350 None:intergenic 25.0%
! ATGGTTAAGATTTGAAAGAA+GGG + chr3_1:59679847-59679866 Msa0365510:CDS 25.0%
! CAAAGAAGAATTTGGAAAAT+GGG + chr3_1:59679930-59679949 Msa0365510:CDS 25.0%
! CAGTGATCATTAATTGAAAA+AGG - chr3_1:59679962-59679981 None:intergenic 25.0%
!!! ATGTGGAAAATTGATTTTTC+AGG + chr3_1:59680169-59680188 Msa0365510:CDS 25.0%
!! ACAAAAAGATTGGATCTTTT+TGG + chr3_1:59680241-59680260 Msa0365510:CDS 25.0%
! TTTGAATTATGAAGCGAATT+CGG - chr3_1:59680460-59680479 None:intergenic 25.0%
!!! TTTATGTAGTTTTGAGTCAA+AGG + chr3_1:59680492-59680511 Msa0365510:CDS 25.0%
! AAGGAAAAGTTGGAAAATTT+AGG + chr3_1:59680511-59680530 Msa0365510:CDS 25.0%
! AGGAAAAGTTGGAAAATTTA+GGG + chr3_1:59680512-59680531 Msa0365510:CDS 25.0%
! ATTAACTTATAAGCCGAATA+TGG - chr3_1:59680805-59680824 None:intergenic 25.0%
!!! AAGAGAAAAAGGTTTTGATT+TGG + chr3_1:59680894-59680913 Msa0365510:CDS 25.0%
! TCCAATGCTCTATATTTATA+CGG - chr3_1:59680955-59680974 None:intergenic 25.0%
! GCTAATTACATAACTTTACA+TGG + chr3_1:59681138-59681157 Msa0365510:CDS 25.0%
! TAGGTCAAAATTGAAAGATT+AGG - chr3_1:59681401-59681420 None:intergenic 25.0%
! ATAACATAAGAAGAAGATTC+AGG - chr3_1:59681899-59681918 None:intergenic 25.0%
! GTTTATAGTATCAAATATGG+AGG + chr3_1:59683032-59683051 Msa0365510:three_prime_UTR 25.0%
! ACATTGGTATATATATCATG+TGG + chr3_1:59683100-59683119 Msa0365510:three_prime_UTR 25.0%
! TGTAACTTGTATAACTGATC+AGG - chr3_1:59678995-59679014 None:intergenic 30.0%
AATGATGAATGATCTGAACT+TGG - chr3_1:59679168-59679187 None:intergenic 30.0%
!!! AGCAATAAAAGTGCTTTTAC+AGG - chr3_1:59679194-59679213 None:intergenic 30.0%
! AATGAAAACCCTTTTCTCAA+AGG + chr3_1:59679291-59679310 Msa0365510:five_prime_UTR 30.0%
! AGTTCAACACTTTAGCTTAA+AGG + chr3_1:59679349-59679368 Msa0365510:five_prime_UTR 30.0%
! GTTCAACACTTTAGCTTAAA+GGG + chr3_1:59679350-59679369 Msa0365510:five_prime_UTR 30.0%
!!! TGAACGTTTTAAGAGTATTC+AGG + chr3_1:59679424-59679443 Msa0365510:CDS 30.0%
! AGTTCTTCATCTGAAACTAA+TGG + chr3_1:59679458-59679477 Msa0365510:CDS 30.0%
AACAAGATTTGCAAATTCTG+AGG - chr3_1:59679573-59679592 None:intergenic 30.0%
! GAACTTTTCTCTGTTTTGTA+TGG + chr3_1:59679737-59679756 Msa0365510:CDS 30.0%
CATGGTTAAGATTTGAAAGA+AGG + chr3_1:59679846-59679865 Msa0365510:CDS 30.0%
TGAATGTCCAAAGAAGAATT+TGG + chr3_1:59679922-59679941 Msa0365510:CDS 30.0%
! CCATTTTCCAAATTCTTCTT+TGG - chr3_1:59679932-59679951 None:intergenic 30.0%
CCAAAGAAGAATTTGGAAAA+TGG + chr3_1:59679929-59679948 Msa0365510:CDS 30.0%
!!! AGTGATGTTTTGTTTTGTGT+TGG + chr3_1:59680055-59680074 Msa0365510:CDS 30.0%
!!! GTGATGTTTTGTTTTGTGTT+GGG + chr3_1:59680056-59680075 Msa0365510:CDS 30.0%
ATGAAGAAATCAAGTGTGTT+AGG + chr3_1:59680080-59680099 Msa0365510:CDS 30.0%
!! GATTTCTAGAATCCAAAATG+TGG + chr3_1:59680152-59680171 Msa0365510:CDS 30.0%
TTACAGCAGAACAAAAAGAT+TGG + chr3_1:59680231-59680250 Msa0365510:CDS 30.0%
!! AGAAGCTCTAAAACAGTATT+GGG - chr3_1:59680268-59680287 None:intergenic 30.0%
ATCTTCTTGTGATTCTCATT+TGG + chr3_1:59680324-59680343 Msa0365510:CDS 30.0%
! GCATTGATACTTATTGAGTA+TGG + chr3_1:59680373-59680392 Msa0365510:CDS 30.0%
GATACTTATTGAGTATGGAT+TGG + chr3_1:59680378-59680397 Msa0365510:CDS 30.0%
! TTGCTTGCAAATTTTTCTCA+GGG + chr3_1:59680429-59680448 Msa0365510:CDS 30.0%
GAATTCGCTTCATAATTCAA+AGG + chr3_1:59680459-59680478 Msa0365510:CDS 30.0%
!! TTTTGAGTCAAAGGAAAAGT+TGG + chr3_1:59680501-59680520 Msa0365510:CDS 30.0%
!!! TCAACATTGTTTTGATGAAG+CGG + chr3_1:59680717-59680736 Msa0365510:CDS 30.0%
TAAACAAGGTCAACCATATT+CGG + chr3_1:59680789-59680808 Msa0365510:CDS 30.0%
ATATTCGAGTATAAACCAGT+CGG + chr3_1:59680835-59680854 Msa0365510:CDS 30.0%
TACAATATGGGAAGAGAAAA+AGG + chr3_1:59680883-59680902 Msa0365510:CDS 30.0%
TTATACGGAAATGAAAGTGA+AGG - chr3_1:59680940-59680959 None:intergenic 30.0%
TCCGTATAAATATAGAGCAT+TGG + chr3_1:59680951-59680970 Msa0365510:CDS 30.0%
ATGGAGTTAGATAAGTTTCT+AGG + chr3_1:59681009-59681028 Msa0365510:CDS 30.0%
! AGTTATGTAATTAGCCTCTA+TGG - chr3_1:59681133-59681152 None:intergenic 30.0%
ATTACATAACTTTACATGGG+AGG + chr3_1:59681142-59681161 Msa0365510:CDS 30.0%
TAGAATTCAGAAGAAGAATC+AGG + chr3_1:59681200-59681219 Msa0365510:CDS 30.0%
!! CACATATGCTTTTAGGAAAA+AGG - chr3_1:59681855-59681874 None:intergenic 30.0%
!! TGTTATTCAGCTTTTGAAAG+AGG + chr3_1:59681913-59681932 Msa0365510:CDS 30.0%
AACGCTATTGAATTGAAATG+TGG + chr3_1:59681995-59682014 Msa0365510:intron 30.0%
TGGTAAAATAGAACTTGCAA+AGG + chr3_1:59682092-59682111 Msa0365510:CDS 30.0%
TCATCAGAAAAATCAACGAA+AGG + chr3_1:59682179-59682198 Msa0365510:CDS 30.0%
CCTTTGATATAAATCAAGTG+TGG - chr3_1:59682919-59682938 None:intergenic 30.0%
CCACACTTGATTTATATCAA+AGG + chr3_1:59682916-59682935 Msa0365510:CDS 30.0%
AAACTCAAGAAGCTATACAT+TGG + chr3_1:59682970-59682989 Msa0365510:three_prime_UTR 30.0%
ATGTAATGTAACTGTACAAG+AGG - chr3_1:59683181-59683200 None:intergenic 30.0%
TATAAAGAGATTCATACCTC+TGG + chr3_1:59683204-59683223 Msa0365510:three_prime_UTR 30.0%
GACACAGAACAATATTGTCT+TGG + chr3_1:59679513-59679532 Msa0365510:CDS 35.0%
TTAAGGCAAGGTTCTATAGA+TGG - chr3_1:59679629-59679648 None:intergenic 35.0%
!! CTACAAGGTTGATTGGTTTA+AGG - chr3_1:59679646-59679665 None:intergenic 35.0%
! AAAGTCTCTACAAGGTTGAT+TGG - chr3_1:59679653-59679672 None:intergenic 35.0%
CTTTAGCAGAACTCTATCAA+CGG + chr3_1:59679669-59679688 Msa0365510:CDS 35.0%
! TTCTCTGTTTTGTATGGTCT+TGG + chr3_1:59679743-59679762 Msa0365510:CDS 35.0%
! ACTTGTTGGTGTTTGTTCAA+TGG + chr3_1:59679877-59679896 Msa0365510:CDS 35.0%
ATGTGTTTGTTTGTCAGATG+AGG + chr3_1:59680030-59680049 Msa0365510:CDS 35.0%
AAGAAATCAAGTGTGTTAGG+TGG + chr3_1:59680083-59680102 Msa0365510:CDS 35.0%
!! GTAATGGATTATGCTCAGAA+GGG + chr3_1:59680191-59680210 Msa0365510:CDS 35.0%
!! CAGAAGCTCTAAAACAGTAT+TGG - chr3_1:59680269-59680288 None:intergenic 35.0%
! AGCTTCTGTCATTTGCTAAT+AGG + chr3_1:59680281-59680300 Msa0365510:CDS 35.0%
!!! TGCTAATAGGTTTTGTTGTG+AGG + chr3_1:59680294-59680313 Msa0365510:CDS 35.0%
! TCTCATTTGGCTTCAATTGT+TGG + chr3_1:59680337-59680356 Msa0365510:CDS 35.0%
! CTTGCTTGCAAATTTTTCTC+AGG + chr3_1:59680428-59680447 Msa0365510:CDS 35.0%
TTTGATGAAGCGGTTGAATT+AGG + chr3_1:59680727-59680746 Msa0365510:CDS 35.0%
CACCTGCTATAGAATAAACA+TGG - chr3_1:59680753-59680772 None:intergenic 35.0%
TGTTTATTCTATAGCAGGTG+TGG + chr3_1:59680753-59680772 Msa0365510:CDS 35.0%
GCTAGAACAAAGCATAAACA+AGG + chr3_1:59680775-59680794 Msa0365510:CDS 35.0%
!! AGAGAGAGCATTGTACAATA+TGG + chr3_1:59680870-59680889 Msa0365510:CDS 35.0%
!! GAGAGAGCATTGTACAATAT+GGG + chr3_1:59680871-59680890 Msa0365510:CDS 35.0%
AGGAGAAGCAAATAAAGGAA+GGG + chr3_1:59680983-59681002 Msa0365510:CDS 35.0%
GCAAATAAAGGAAGGGATTA+TGG + chr3_1:59680990-59681009 Msa0365510:CDS 35.0%
! ACCTGATTGTTTAGAGTTGA+GGG + chr3_1:59681044-59681063 Msa0365510:CDS 35.0%
!! TAGAGCTTTGTTAACCATAG+AGG + chr3_1:59681116-59681135 Msa0365510:CDS 35.0%
GGATGCAATTATACCAACAA+TGG + chr3_1:59681232-59681251 Msa0365510:CDS 35.0%
CAAAGAACCAACATCATCAA+CGG - chr3_1:59681262-59681281 None:intergenic 35.0%
! AGTGCTACTGCTACATATAT+AGG - chr3_1:59681420-59681439 None:intergenic 35.0%
CGCGTGTTAGTAAATACAAT+TGG + chr3_1:59681615-59681634 Msa0365510:intron 35.0%
GCACAGATTAAACTGTCAAA+AGG + chr3_1:59681676-59681695 Msa0365510:intron 35.0%
AGAGGCTAATTTATGAAGGA+TGG + chr3_1:59681750-59681769 Msa0365510:CDS 35.0%
! GGATGGATTCTATATGATAC+TGG + chr3_1:59681767-59681786 Msa0365510:CDS 35.0%
! CTGCTAACACATATGCTTTT+AGG - chr3_1:59681862-59681881 None:intergenic 35.0%
! TGTCTTGTGCAATATTTTGC+AGG + chr3_1:59682035-59682054 Msa0365510:intron 35.0%
!! TTTGCAGGCATTGAATAACA+TGG + chr3_1:59682050-59682069 Msa0365510:intron 35.0%
!! TTGCAGGCATTGAATAACAT+GGG + chr3_1:59682051-59682070 Msa0365510:intron 35.0%
!! TAACATGGGGAGTATTTATG+TGG + chr3_1:59682065-59682084 Msa0365510:CDS 35.0%
! CTATAAGGGTATGTCCTTAA+AGG - chr3_1:59682333-59682352 None:intergenic 35.0%
GACATACCCTTATAGATACA+GGG + chr3_1:59682338-59682357 Msa0365510:CDS 35.0%
GCTTTAATCAATGTGCAGAT+AGG - chr3_1:59682393-59682412 None:intergenic 35.0%
GCTTATGAACATGTTGTAAG+TGG + chr3_1:59682548-59682567 Msa0365510:intron 35.0%
AAGCAGTTGTAAGACTTTCT+AGG - chr3_1:59682588-59682607 None:intergenic 35.0%
ATGTGAGAGACTATTTGGAT+TGG - chr3_1:59682636-59682655 None:intergenic 35.0%
TCATCATGTGAGAGACTATT+TGG - chr3_1:59682641-59682660 None:intergenic 35.0%
! AGATGAAGCATTTGAAGATC+TGG - chr3_1:59682807-59682826 None:intergenic 35.0%
AGCTATACATTGGATGAATC+AGG + chr3_1:59682980-59682999 Msa0365510:three_prime_UTR 35.0%
TCTGTTAACGTTGTGAGGTT+TGG - chr3_1:59679495-59679514 None:intergenic 40.0%
GGTTCAATAGTGTCAGTTGA+AGG - chr3_1:59679608-59679627 None:intergenic 40.0%
!! AGGTTGATTGGTTTAAGGCA+AGG - chr3_1:59679641-59679660 None:intergenic 40.0%
GTTCTGCTAAAGTCTCTACA+AGG - chr3_1:59679661-59679680 None:intergenic 40.0%
GACATCTTCTGAGTAACTTC+TGG - chr3_1:59679772-59679791 None:intergenic 40.0%
GAAGATGTCTTAGAAATGCG+CGG + chr3_1:59679783-59679802 Msa0365510:CDS 40.0%
AGAAGGGATGATGAACTTGT+TGG + chr3_1:59679863-59679882 Msa0365510:CDS 40.0%
!! GGTGTTTGTTCAATGGATTG+TGG + chr3_1:59679884-59679903 Msa0365510:CDS 40.0%
!! GTTTGTTCAATGGATTGTGG+TGG + chr3_1:59679887-59679906 Msa0365510:CDS 40.0%
!! CCACAAAGCATTGCATTCAA+TGG - chr3_1:59680130-59680149 None:intergenic 40.0%
CCATTGAATGCAATGCTTTG+TGG + chr3_1:59680127-59680146 Msa0365510:CDS 40.0%
TTGAATGCAATGCTTTGTGG+TGG + chr3_1:59680130-59680149 Msa0365510:CDS 40.0%
!! GGTAATGGATTATGCTCAGA+AGG + chr3_1:59680190-59680209 Msa0365510:CDS 40.0%
! GTTGTACTATTTTCTCAGCC+AGG + chr3_1:59680549-59680568 Msa0365510:CDS 40.0%
GAAAACAACAGCGATGTTGT+TGG + chr3_1:59680597-59680616 Msa0365510:CDS 40.0%
GTCTTGCATTGCATCAACTA+GGG + chr3_1:59680659-59680678 Msa0365510:CDS 40.0%
GGCCATGTTTATTCTATAGC+AGG + chr3_1:59680748-59680767 Msa0365510:CDS 40.0%
AGTCGAGGAGAAGCAAATAA+AGG + chr3_1:59680978-59680997 Msa0365510:CDS 40.0%
GAGGAGAAGCAAATAAAGGA+AGG + chr3_1:59680982-59681001 Msa0365510:CDS 40.0%
! CACCTGATTGTTTAGAGTTG+AGG + chr3_1:59681043-59681062 Msa0365510:CDS 40.0%
! ATTGTTTAGAGTTGAGGGCT+TGG + chr3_1:59681049-59681068 Msa0365510:CDS 40.0%
ACTTTACATGGGAGGATCAA+AGG + chr3_1:59681150-59681169 Msa0365510:CDS 40.0%
GAGGATCAAAGGTGAATGTT+TGG + chr3_1:59681161-59681180 Msa0365510:CDS 40.0%
AGAAGAATCAGGCTGATTGT+TGG + chr3_1:59681211-59681230 Msa0365510:CDS 40.0%
!! CGTTGATGATGTTGGTTCTT+TGG + chr3_1:59681260-59681279 Msa0365510:CDS 40.0%
CTAAAGATGCTTACCTCAAG+AGG - chr3_1:59681353-59681372 None:intergenic 40.0%
CAGGAGAGGCTAATTTATGA+AGG + chr3_1:59681746-59681765 Msa0365510:CDS 40.0%
GCACTTAAATGTCCTTCAGA+CGG + chr3_1:59681935-59681954 Msa0365510:CDS 40.0%
!! TGCAGGCATTGAATAACATG+GGG + chr3_1:59682052-59682071 Msa0365510:intron 40.0%
!! GGGAGTATTTATGTGGATTG+TGG + chr3_1:59682072-59682091 Msa0365510:CDS 40.0%
ACAACAATGCACTTGCGATT+AGG + chr3_1:59682121-59682140 Msa0365510:CDS 40.0%
! GACAATGCTGATTGAGAAAG+CGG + chr3_1:59682218-59682237 Msa0365510:CDS 40.0%
AGAATACTGTGATCGTGAGA+TGG + chr3_1:59682272-59682291 Msa0365510:CDS 40.0%
CAACACACCTTGATCCTTTA+AGG + chr3_1:59682316-59682335 Msa0365510:CDS 40.0%
GGTATGTCCTTAAAGGATCA+AGG - chr3_1:59682326-59682345 None:intergenic 40.0%
GGACATACCCTTATAGATAC+AGG + chr3_1:59682337-59682356 Msa0365510:CDS 40.0%
! GGTTCAACTGTTTTCGTGTA+AGG + chr3_1:59682470-59682489 Msa0365510:intron 40.0%
! GTTGTAAGACTTTCTAGGAG+AGG - chr3_1:59682583-59682602 None:intergenic 40.0%
! GCATATATGACTAGTGCTGA+TGG + chr3_1:59682725-59682744 Msa0365510:intron 40.0%
AGCAGTAGAAGAACTCACTA+AGG + chr3_1:59682767-59682786 Msa0365510:CDS 40.0%
TAAATCAAGTGTGGCTGCAT+GGG - chr3_1:59682910-59682929 None:intergenic 40.0%
ATAAATCAAGTGTGGCTGCA+TGG - chr3_1:59682911-59682930 None:intergenic 40.0%
TGGATGAATCAGGAGAAAGA+TGG + chr3_1:59682990-59683009 Msa0365510:three_prime_UTR 40.0%
CTCTCTCTCTCTCTCTCTAA+TGG + chr3_1:59678933-59678952 Msa0365510:five_prime_UTR 45.0%
!! TAGTGCCACTTTCTGAGCAT+AGG + chr3_1:59678962-59678981 Msa0365510:five_prime_UTR 45.0%
AACCTCCTATGCTCAGAAAG+TGG - chr3_1:59678970-59678989 None:intergenic 45.0%
CTGTGTCTGTTAACGTTGTG+AGG - chr3_1:59679500-59679519 None:intergenic 45.0%
CAAAGGTTGTGTTGTCTGCA+TGG + chr3_1:59679828-59679847 Msa0365510:CDS 45.0%
! GTACTATTTTCTCAGCCAGG+TGG + chr3_1:59680552-59680571 Msa0365510:CDS 45.0%
! AAGAGTGTGCTTCAGAGAGA+TGG + chr3_1:59680629-59680648 Msa0365510:CDS 45.0%
GGTCTTGCATTGCATCAACT+AGG + chr3_1:59680658-59680677 Msa0365510:CDS 45.0%
TCGAGTATAAACCAGTCGGT+TGG + chr3_1:59680839-59680858 Msa0365510:CDS 45.0%
TCTTGATACATCCAACCGAC+TGG - chr3_1:59680853-59680872 None:intergenic 45.0%
!! TAGAGCATTGGAGAAAGTCG+AGG + chr3_1:59680963-59680982 Msa0365510:CDS 45.0%
GCCCTCAACTCTAAACAATC+AGG - chr3_1:59681048-59681067 None:intergenic 45.0%
CATCAACGGAAGACCATTGT+TGG - chr3_1:59681248-59681267 None:intergenic 45.0%
!! TGGTCTTCCGTTGATGATGT+TGG + chr3_1:59681252-59681271 Msa0365510:CDS 45.0%
TGACACGATTCTGACAGATG+TGG + chr3_1:59681477-59681496 Msa0365510:intron 45.0%
AAACCATTCCACCTCAATGC+AGG + chr3_1:59681727-59681746 Msa0365510:CDS 45.0%
! AATTAGCCTCTCCTGCATTG+AGG - chr3_1:59681741-59681760 None:intergenic 45.0%
CTGCTGCCCTGTATCTATAA+GGG - chr3_1:59682347-59682366 None:intergenic 45.0%
!! TCCCATTGACTCGTAAAACG+CGG - chr3_1:59682835-59682854 None:intergenic 45.0%
!! TGCCACTTTCTGAGCATAGG+AGG + chr3_1:59678965-59678984 Msa0365510:five_prime_UTR 50.0%
CGCGGAAGATGTGATGTCAA+AGG + chr3_1:59679811-59679830 Msa0365510:CDS 50.0%
! TTTTCTCAGCCAGGTGGCAA+TGG + chr3_1:59680558-59680577 Msa0365510:CDS 50.0%
TGCTTTCTTCCATTGCCACC+TGG - chr3_1:59680570-59680589 None:intergenic 50.0%
TGCTTCAGAGAGATGGCAGA+AGG + chr3_1:59680636-59680655 Msa0365510:CDS 50.0%
GCTTCAGAGAGATGGCAGAA+GGG + chr3_1:59680637-59680656 Msa0365510:CDS 50.0%
CAGATGCTAGAGAATGAGCC+TGG + chr3_1:59681294-59681313 Msa0365510:CDS 50.0%
AACTCTAGCAGGCTCTTTCC+AGG - chr3_1:59681315-59681334 None:intergenic 50.0%
TCTCCTGCATTGAGGTGGAA+TGG - chr3_1:59681733-59681752 None:intergenic 50.0%
ATTCCACCTCAATGCAGGAG+AGG + chr3_1:59681732-59681751 Msa0365510:CDS 50.0%
! TGATACTGGCTATCGTGACG+AGG + chr3_1:59681781-59681800 Msa0365510:CDS 50.0%
ATCGTGACGAGGCTGTTACA+AGG + chr3_1:59681792-59681811 Msa0365510:CDS 50.0%
TCGTGACGAGGCTGTTACAA+GGG + chr3_1:59681793-59681812 Msa0365510:CDS 50.0%
AGGCACACAAGAGCTCATCA+AGG + chr3_1:59682141-59682160 Msa0365510:CDS 50.0%
CACAAGAGCTCATCAAGGTC+TGG + chr3_1:59682146-59682165 Msa0365510:CDS 50.0%
GAAAGCGGAGAGTAATGCCT+CGG + chr3_1:59682233-59682252 Msa0365510:CDS 50.0%
TGATCGTTTCTCATACGCCG+AGG - chr3_1:59682253-59682272 None:intergenic 50.0%
CCTGCTGCCCTGTATCTATA+AGG - chr3_1:59682348-59682367 None:intergenic 50.0%
CCTTATAGATACAGGGCAGC+AGG + chr3_1:59682345-59682364 Msa0365510:CDS 50.0%
! AGCCGCGTTTTACGAGTCAA+TGG + chr3_1:59682830-59682849 Msa0365510:CDS 50.0%
! GCCGCGTTTTACGAGTCAAT+GGG + chr3_1:59682831-59682850 Msa0365510:CDS 50.0%
TAGAAATGCGCGGCAGAACG+CGG + chr3_1:59679793-59679812 Msa0365510:CDS 55.0%
GCGACAGACGAAACTCTAGC+AGG - chr3_1:59681326-59681345 None:intergenic 55.0%
GTCTGTCGCTACTCCTCTTG+AGG + chr3_1:59681337-59681356 Msa0365510:CDS 55.0%
AGGCTGCAATGCGCAGTTTG+CGG + chr3_1:59681696-59681715 Msa0365510:CDS 55.0%
TAGCCTCTCCTGCATTGAGG+TGG - chr3_1:59681738-59681757 None:intergenic 55.0%
CCTTTGCGAAGTCCGTCTGA+AGG - chr3_1:59681950-59681969 None:intergenic 55.0%
! CCTTCAGACGGACTTCGCAA+AGG + chr3_1:59681947-59681966 Msa0365510:CDS 55.0%
CTGTGATCGTGAGATGGCGA+AGG + chr3_1:59682278-59682297 Msa0365510:CDS 55.0%
TCAAGTGTGGCTGCATGGGT+TGG - chr3_1:59682906-59682925 None:intergenic 55.0%
TGCAATGCGCAGTTTGCGGC+TGG + chr3_1:59681700-59681719 Msa0365510:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 59678932 59683236 59678932 ID=Msa0365510;Name=Msa0365510
chr3_1 mRNA 59678932 59683236 59678932 ID=Msa0365510-mRNA-1;Parent=Msa0365510;Name=Msa0365510-mRNA-1;_AED=0.02;_eAED=0.02;_QI=472|1|1|1|1|1|4|277|925
chr3_1 exon 59678932 59681358 59678932 ID=Msa0365510-mRNA-1:exon:11379;Parent=Msa0365510-mRNA-1
chr3_1 exon 59681682 59681973 59681682 ID=Msa0365510-mRNA-1:exon:11380;Parent=Msa0365510-mRNA-1
chr3_1 exon 59682057 59682366 59682057 ID=Msa0365510-mRNA-1:exon:11381;Parent=Msa0365510-mRNA-1
chr3_1 exon 59682739 59683236 59682739 ID=Msa0365510-mRNA-1:exon:11382;Parent=Msa0365510-mRNA-1
chr3_1 five_prime_UTR 59678932 59679403 59678932 ID=Msa0365510-mRNA-1:five_prime_utr;Parent=Msa0365510-mRNA-1
chr3_1 CDS 59679404 59681358 59679404 ID=Msa0365510-mRNA-1:cds;Parent=Msa0365510-mRNA-1
chr3_1 CDS 59681682 59681973 59681682 ID=Msa0365510-mRNA-1:cds;Parent=Msa0365510-mRNA-1
chr3_1 CDS 59682057 59682366 59682057 ID=Msa0365510-mRNA-1:cds;Parent=Msa0365510-mRNA-1
chr3_1 CDS 59682739 59682959 59682739 ID=Msa0365510-mRNA-1:cds;Parent=Msa0365510-mRNA-1
chr3_1 three_prime_UTR 59682960 59683236 59682960 ID=Msa0365510-mRNA-1:three_prime_utr;Parent=Msa0365510-mRNA-1
Gene Sequence

>Msa0365510

ATGCGTAGTTTGAAGATTGTTGAACGTTTTAAGAGTATTCAGGTTCATGCTCTTAGTTCTTCATCTGAAACTAATGGTGACAGCAAAACCAAACCTCACAACGTTAACAGACACAGAACAATATTGTCTTGGTCAAAATCAAAATTCAACAACAGTAACACAAAAACCTCAGAATTTGCAAATCTTGTTTCTCTTCAGTTACCTTCAACTGACACTATTGAACCATCTATAGAACCTTGCCTTAAACCAATCAACCTTGTAGAGACTTTAGCAGAACTCTATCAACGGATAGAGTTTTGCTCTTCACAGTCTGAGAAAGTGACACTTTTTGTTGAACTTTTCTCTGTTTTGTATGGTCTTGGAGACCAGAAGTTACTCAGAAGATGTCTTAGAAATGCGCGGCAGAACGCGGAAGATGTGATGTCAAAGGTTGTGTTGTCTGCATGGTTAAGATTTGAAAGAAGGGATGATGAACTTGTTGGTGTTTGTTCAATGGATTGTGGTGGTTATAATGTTCTTGAATGTCCAAAGAAGAATTTGGAAAATGGGTTTAGTCCTTTTTCAATTAATGATCACTGCAAGTGTACTCAAGAAGAGAAAAAGCATGAAAATTTTGATAATGATGAATGTGTTTGTTTGTCAGATGAGGAAAGTGATGTTTTGTTTTGTGTTGGGAATGAAGAAATCAAGTGTGTTAGGTGGAGAATTGCTTCACTTTCAGAACCATTGAATGCAATGCTTTGTGGTGGATTTCTAGAATCCAAAATGTGGAAAATTGATTTTTCAGGTAATGGATTATGCTCAGAAGGGATGAAAGCAGTTGAATTTTACAGCAGAACAAAAAGATTGGATCTTTTTGGTCCCAATACTGTTTTAGAGCTTCTGTCATTTGCTAATAGGTTTTGTTGTGAGGAGATGAAATCTTCTTGTGATTCTCATTTGGCTTCAATTGTTGGAAATGTTGAAGATGCATTGATACTTATTGAGTATGGATTGGAAGAAAGTGCAAAACTTCTTATAGTTTCTTGCTTGCAAATTTTTCTCAGGGAGCTTCCGAATTCGCTTCATAATTCAAAGGTGATAAATTTTTTATGTAGTTTTGAGTCAAAGGAAAAGTTGGAAAATTTAGGGTGTGCTACTTTCTTGTTGTACTATTTTCTCAGCCAGGTGGCAATGGAAGAAAGCATCGTATCGAAAACAACAGCGATGTTGTTGGAGAGAATGAAAGAGTGTGCTTCAGAGAGATGGCAGAAGGGTCTTGCATTGCATCAACTAGGGTGTGTGTTTCTTGAGAGAAGAGAGTATAAAGAAGCTCAACATTGTTTTGATGAAGCGGTTGAATTAGGCCATGTTTATTCTATAGCAGGTGTGGCTAGAACAAAGCATAAACAAGGTCAACCATATTCGGCTTATAAGTTAATTAGTTCACTCATATTCGAGTATAAACCAGTCGGTTGGATGTATCAAGAGAGAGCATTGTACAATATGGGAAGAGAAAAAGGTTTTGATTTGGATTTTGCAACTCAACTCGATCCTTCACTTTCATTTCCGTATAAATATAGAGCATTGGAGAAAGTCGAGGAGAAGCAAATAAAGGAAGGGATTATGGAGTTAGATAAGTTTCTAGGATTTAAGCTTTCACCTGATTGTTTAGAGTTGAGGGCTTGGTTGTATATTGCATTAGATGATTATGATAGTGCTATAAGAGATATTAGAGCTTTGTTAACCATAGAGGCTAATTACATAACTTTACATGGGAGGATCAAAGGTGAATGTTTGGTTCAAATTCTTCAAAGTAGAATTCAGAAGAAGAATCAGGCTGATTGTTGGATGCAATTATACCAACAATGGTCTTCCGTTGATGATGTTGGTTCTTTGGCTATTATACATCAGATGCTAGAGAATGAGCCTGGAAAGAGCCTGCTAGAGTTTCGTCTGTCGCTACTCCTCTTGAGATTAAACTGTCAAAAGGCTGCAATGCGCAGTTTGCGGCTGGCAAGAAACCATTCCACCTCAATGCAGGAGAGGCTAATTTATGAAGGATGGATTCTATATGATACTGGCTATCGTGACGAGGCTGTTACAAGGGCTGACAAATCCATTGAAATTCAGAAATCATTTGAAGCCTTTTTCCTAAAAGCATATGTGTTAGCAGATACAAATCTTGATCCTGAATCTTCTTCTTATGTTATTCAGCTTTTGAAAGAGGCACTTAAATGTCCTTCAGACGGACTTCGCAAAGGACAAGCATTGAATAACATGGGGAGTATTTATGTGGATTGTGGTAAAATAGAACTTGCAAAGGAATGCTACAACAATGCACTTGCGATTAGGCACACAAGAGCTCATCAAGGTCTGGCGCGTGTTTATCATCAGAAAAATCAACGAAAGGCTGCATACGATGAAATGACAATGCTGATTGAGAAAGCGGAGAGTAATGCCTCGGCGTATGAGAAACGATCAGAATACTGTGATCGTGAGATGGCGAAGGCTGATCTTGATGTTGCAACACACCTTGATCCTTTAAGGACATACCCTTATAGATACAGGGCAGCAGTGCTGATGGATGAGCAAAAAGAAACAGAAGCAGTAGAAGAACTCACTAAGGCTATAAAATTCAAGCCAGATCTTCAAATGCTTCATCTACGAGCCGCGTTTTACGAGTCAATGGGAGATCTATTTTCTGCTCTTAAAGATTGTCAAGCTGCTCTTTGTTTAGATCCAACCCATGCAGCCACACTTGATTTATATCAAAGGATACAAAAGCTGAACTTTTGA
Protein sequence

>Msa0365510

MRSLKIVERFKSIQVHALSSSSETNGDSKTKPHNVNRHRTILSWSKSKFNNSNTKTSEFANLVSLQLPSTDTIEPSIEPCLKPINLVETLAELYQRIEFCSSQSEKVTLFVELFSVLYGLGDQKLLRRCLRNARQNAEDVMSKVVLSAWLRFERRDDELVGVCSMDCGGYNVLECPKKNLENGFSPFSINDHCKCTQEEKKHENFDNDECVCLSDEESDVLFCVGNEEIKCVRWRIASLSEPLNAMLCGGFLESKMWKIDFSGNGLCSEGMKAVEFYSRTKRLDLFGPNTVLELLSFANRFCCEEMKSSCDSHLASIVGNVEDALILIEYGLEESAKLLIVSCLQIFLRELPNSLHNSKVINFLCSFESKEKLENLGCATFLLYYFLSQVAMEESIVSKTTAMLLERMKECASERWQKGLALHQLGCVFLERREYKEAQHCFDEAVELGHVYSIAGVARTKHKQGQPYSAYKLISSLIFEYKPVGWMYQERALYNMGREKGFDLDFATQLDPSLSFPYKYRALEKVEEKQIKEGIMELDKFLGFKLSPDCLELRAWLYIALDDYDSAIRDIRALLTIEANYITLHGRIKGECLVQILQSRIQKKNQADCWMQLYQQWSSVDDVGSLAIIHQMLENEPGKSLLEFRLSLLLLRLNCQKAAMRSLRLARNHSTSMQERLIYEGWILYDTGYRDEAVTRADKSIEIQKSFEAFFLKAYVLADTNLDPESSSYVIQLLKEALKCPSDGLRKGQALNNMGSIYVDCGKIELAKECYNNALAIRHTRAHQGLARVYHQKNQRKAAYDEMTMLIEKAESNASAYEKRSEYCDREMAKADLDVATHLDPLRTYPYRYRAAVLMDEQKETEAVEELTKAIKFKPDLQMLHLRAAFYESMGDLFSALKDCQAALCLDPTHAATLDLYQRIQKLNF*