AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0485670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0485670 MtrunA17_Chr3g0105811 97.622 925 21 1 1 924 1 925 0.0 1868
Msa0485670 MtrunA17_Chr4g0005681 58.617 940 368 9 1 921 9 946 0.0 1107
Msa0485670 MtrunA17_Chr7g0243131 64.774 687 242 0 235 921 1 687 0.0 937
Msa0485670 MtrunA17_Chr1g0185181 47.232 849 427 6 74 919 51 881 0.0 784
Msa0485670 MtrunA17_Chr7g0243111 43.158 190 97 3 1 183 9 194 6.62e-36 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0485670 AT3G51770.2 63.109 862 316 2 62 923 97 956 0.0 1151
Msa0485670 AT3G51770.1 63.109 862 316 2 62 923 89 948 0.0 1151
Msa0485670 AT5G58550.1 56.432 925 380 6 1 918 1 909 0.0 1029
Msa0485670 AT4G02680.1 48.406 847 422 4 74 919 51 883 0.0 775

Find 173 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACACACCTTGATCCTTTA+AGG 0.060854 3_4:+3394486 Msa0485670:CDS
CAACAAGGTTGATTGGTTTA+AGG 0.163269 3_4:-3391818 None:intergenic
AAGGAAAAGTTGGAAAATTT+AGG 0.184841 3_4:+3392683 Msa0485670:CDS
GCAAATAAAGGAAGGGATTA+TGG 0.210325 3_4:+3393162 Msa0485670:CDS
CCAAAGAAGAATTTGGAAAA+TGG 0.220561 3_4:+3392104 Msa0485670:CDS
TACAATATGGGAAGAGAAAA+AGG 0.232145 3_4:+3393055 Msa0485670:CDS
TCCAATGCTCTATATTTATA+CGG 0.234438 3_4:-3393124 None:intergenic
TGAATGTCCAAAGAAGAATT+TGG 0.244879 3_4:+3392097 Msa0485670:CDS
AGTTCAACACTTTAGCTTAA+AGG 0.245361 3_4:+3391523 Msa0485670:five_prime_UTR
CAGTGATCATTAATTGAAAA+AGG 0.250740 3_4:-3392134 None:intergenic
CGTTGATGATGTTGGTTCTT+TGG 0.260043 3_4:+3393432 Msa0485670:CDS
ATGGAGTTAGATAAGTTTCT+AGG 0.286460 3_4:+3393181 Msa0485670:CDS
GCATTGATACTTATTGAGTA+TGG 0.289441 3_4:+3392545 Msa0485670:CDS
ATTAACTTATAAGCTGAATA+TGG 0.291663 3_4:-3392974 None:intergenic
AGGAAAAGTTGGAAAATTTA+GGG 0.292799 3_4:+3392684 Msa0485670:CDS
AGAAGCTCTAAAACAGTATT+AGG 0.293859 3_4:-3392437 None:intergenic
CCTGCTGCCCTGTATCTATA+AGG 0.297319 3_4:-3394515 None:intergenic
GTTCAACACTTTAGCTTAAA+GGG 0.306153 3_4:+3391524 Msa0485670:five_prime_UTR
CTATAAGGGTATGTCCTTAA+AGG 0.309106 3_4:-3394500 None:intergenic
ATCTTCATGTGATTCTCATT+TGG 0.316040 3_4:+3392496 Msa0485670:CDS
TTTGTTTATAGTATCAAATA+TGG 0.323757 3_4:+3395199 Msa0485670:three_prime_UTR
AGAGCGAGCATTGTACAATA+TGG 0.334761 3_4:+3393042 Msa0485670:CDS
TTCGATGAAGCAGTTGAATT+AGG 0.336536 3_4:+3392899 Msa0485670:CDS
ACAACAATGCACTTGCAATT+AGG 0.349845 3_4:+3394291 Msa0485670:CDS
ACCTGATTGTTTAGAGTTGA+GGG 0.350604 3_4:+3393216 Msa0485670:CDS
CAAAGAAGAATTTGGAAAAT+GGG 0.354347 3_4:+3392105 Msa0485670:CDS
TCTCATTTGGCTTCAATTGT+TGG 0.360828 3_4:+3392509 Msa0485670:CDS
AACTCTAGCAGGCTCTTTCC+AGG 0.361101 3_4:-3393484 None:intergenic
ACTTTAGCTTAAAGGGTTGT+TGG 0.363563 3_4:+3391531 Msa0485670:five_prime_UTR
TTAAGGTAAGGTTCTATAGA+TGG 0.365386 3_4:-3391801 None:intergenic
AGTTATGTAATTAGCCTCTA+TGG 0.365662 3_4:-3393302 None:intergenic
AATATGAACCTTTGAGAAAA+GGG 0.369712 3_4:-3391473 None:intergenic
ATAACATAAGAAGAAGATTC+AGG 0.375878 3_4:-3394068 None:intergenic
AGCTTCTGTCATTTGCCAAT+AGG 0.381135 3_4:+3392453 Msa0485670:CDS
AAATGATTTCTGAATTTCAA+TGG 0.382753 3_4:-3393997 None:intergenic
AAAGTCTCAACAAGGTTGAT+TGG 0.386359 3_4:-3391825 None:intergenic
AGTTCTTCATCTGAAACTAA+TGG 0.389641 3_4:+3391633 Msa0485670:CDS
TTTGAATTATGAAGCGAATT+CGG 0.390936 3_4:-3392629 None:intergenic
TCTGTTAAGGTTGTGAGGTT+TGG 0.394276 3_4:-3391667 None:intergenic
CACCTGATTGTTTAGAGTTG+AGG 0.398050 3_4:+3393215 Msa0485670:CDS
TGCAATGCGCAGTTTGCGGC+TGG 0.409116 3_4:+3393872 Msa0485670:CDS
AAATATGAACCTTTGAGAAA+AGG 0.411072 3_4:-3391474 None:intergenic
AGATGAAGCATTTGAAGATC+TGG 0.417480 3_4:-3394974 None:intergenic
AGTCGAGGAGAAGCAAATAA+AGG 0.422463 3_4:+3393150 Msa0485670:CDS
GACATCTTCTGAGTAGCTTC+TGG 0.426439 3_4:-3391944 None:intergenic
ACTTTGAATGAAAATAAACT+TGG 0.427860 3_4:-3391503 None:intergenic
ATATTGTTCTGTGTCTGTTA+AGG 0.430267 3_4:-3391680 None:intergenic
TTAAAGGGTTGTTGGAAAAG+TGG 0.432318 3_4:+3391539 Msa0485670:five_prime_UTR
TAGAATTCAGAAGAAGAATC+AGG 0.435527 3_4:+3393372 Msa0485670:CDS
GAGGATCAAAGGTGAATGTT+TGG 0.435726 3_4:+3393333 Msa0485670:CDS
GGACATACCCTTATAGATAC+AGG 0.436012 3_4:+3394507 Msa0485670:CDS
AGCTATACATTGGATGAATC+AGG 0.436130 3_4:+3395150 Msa0485670:three_prime_UTR
ACTTGTTGGTGTTTGTTCAA+TGG 0.438005 3_4:+3392052 Msa0485670:CDS
CTCCTCACAACAAAACCTAT+TGG 0.438977 3_4:-3392468 None:intergenic
TGCTTTCTTCCATTGCCACC+TGG 0.443243 3_4:-3392739 None:intergenic
CATGGTTGAGATTTGAAAGA+AGG 0.447270 3_4:+3392021 Msa0485670:CDS
AGGCTGCAATGCGCAGTTTG+CGG 0.457525 3_4:+3393868 Msa0485670:CDS
ATTGTTTAGAGTTGAGGGCT+TGG 0.457835 3_4:+3393221 Msa0485670:CDS
GGATGGATTCTATACGATAC+TGG 0.458073 3_4:+3393939 Msa0485670:CDS
CCACAAAGCATTGCATTCAA+TGG 0.458652 3_4:-3392299 None:intergenic
TATAAAGAGATTCATACCTC+TGG 0.467553 3_4:+3395374 Msa0485670:three_prime_UTR
GAAAACAACAGCGATGTTGT+TGG 0.467904 3_4:+3392769 Msa0485670:CDS
GCTAATTACATAACTTTACA+TGG 0.469791 3_4:+3393310 Msa0485670:CDS
TAGAGCTTTGTTAACCATAG+AGG 0.473166 3_4:+3393288 Msa0485670:CDS
GCCCTCAACTCTAAACAATC+AGG 0.478669 3_4:-3393217 None:intergenic
AGAAGAATCAGGCTGATTGT+TGG 0.481618 3_4:+3393383 Msa0485670:CDS
AGGTTGATTGGTTTAAGGTA+AGG 0.483748 3_4:-3391813 None:intergenic
CTGCTGCCCTGTATCTATAA+GGG 0.484423 3_4:-3394514 None:intergenic
TGTAACTTGTATAACTGATC+AGG 0.484904 3_4:-3391170 None:intergenic
CACAAGAGCTCATCAAGGTC+TGG 0.485931 3_4:+3394316 Msa0485670:CDS
TCCGTATAAATATAGAGCAT+TGG 0.486476 3_4:+3393123 Msa0485670:CDS
TGCCACTTTCTGAGCATAGC+AGG 0.489263 3_4:+3391143 Msa0485670:five_prime_UTR
TAACATGGGGAGTATTTATG+TGG 0.495928 3_4:+3394235 Msa0485670:CDS
GATACTTATTGAGTATGGAT+TGG 0.496423 3_4:+3392550 Msa0485670:CDS
AGAGGCTAATTTATGAAGGA+TGG 0.497913 3_4:+3393922 Msa0485670:CDS
GGCCATGTATATTCTATAGC+AGG 0.500619 3_4:+3392920 Msa0485670:CDS
TCTCCTGCATTGAGGTGGAA+TGG 0.502258 3_4:-3393902 None:intergenic
CCATTGAATGCAATGCTTTG+TGG 0.503790 3_4:+3392299 Msa0485670:CDS
CAGATGCTAGAGAATGAGCC+TGG 0.507226 3_4:+3393466 Msa0485670:CDS
GACAATGCTGATTGAGAAAG+CGG 0.508703 3_4:+3394388 Msa0485670:CDS
GAGCGAGCATTGTACAATAT+GGG 0.509845 3_4:+3393043 Msa0485670:CDS
TGCTGCAGAGAGGTGGCAGA+AGG 0.511155 3_4:+3392808 Msa0485670:CDS
AAGAAATCAAGTGTGTAAGA+TGG 0.511301 3_4:+3392255 Msa0485670:CDS
CATCAACGGAAGACCATTGT+TGG 0.513844 3_4:-3393417 None:intergenic
AGCAGTAGAAGAACTCACTA+AGG 0.514403 3_4:+3394937 Msa0485670:CDS
CTAAAGATGCTTACCTCAAG+AGG 0.517512 3_4:-3393522 None:intergenic
CAAAGGTTGTGTTGTCTGCA+TGG 0.521375 3_4:+3392003 Msa0485670:CDS
GGTAATGGATTATGCTCAGA+AGG 0.523902 3_4:+3392362 Msa0485670:CDS
GCACAGATTAAACTGTCAAA+AGG 0.527141 3_4:+3393848 Msa0485670:intron
AACAAGATTTGCAAATTCTG+AGG 0.534851 3_4:-3391745 None:intergenic
GACACAGAACAATATTGTCT+TGG 0.535289 3_4:+3391688 Msa0485670:CDS
ACTTTACATGGGAGGATCAA+AGG 0.539277 3_4:+3393322 Msa0485670:CDS
GTCTGTCGCTACTCCTCTTG+AGG 0.540305 3_4:+3393509 Msa0485670:CDS
AAACCATTCCACCTCAATGC+AGG 0.545159 3_4:+3393899 Msa0485670:CDS
GGTTCAATAGTGTCGGTTGA+AGG 0.545245 3_4:-3391780 None:intergenic
GGTATGTCCTTAAAGGATCA+AGG 0.546574 3_4:-3394493 None:intergenic
CCTTATAGATACAGGGCAGC+AGG 0.549665 3_4:+3394515 Msa0485670:CDS
TTTGCAGGCATTGAATAACA+TGG 0.549951 3_4:+3394220 Msa0485670:intron
GTTTATAGTATCAAATATGG+AGG 0.553533 3_4:+3395202 Msa0485670:three_prime_UTR
TTGCAGGCATTGAATAACAT+GGG 0.554480 3_4:+3394221 Msa0485670:intron
CAGGAGAGGCTAATTTATGA+AGG 0.554998 3_4:+3393918 Msa0485670:CDS
ATCGTGACGAGGCTGTTACA+AGG 0.556551 3_4:+3393964 Msa0485670:CDS
GCATATATGACTAGTGCTGA+TGG 0.557153 3_4:+3394895 Msa0485670:intron
TCAAGTGTGGCTGCATGGGT+TGG 0.559007 3_4:-3395073 None:intergenic
CTTTGAATGAAAATAAACTT+GGG 0.562046 3_4:-3391502 None:intergenic
ATGTAATGTAACTGTACAAG+AGG 0.565524 3_4:-3395348 None:intergenic
TAAATCAAGTGTGGCTGCAT+GGG 0.565537 3_4:-3395077 None:intergenic
TATAGATGGTTCAATAGTGT+CGG 0.567468 3_4:-3391787 None:intergenic
GGTGTTTGTTCAATGGATTG+TGG 0.568555 3_4:+3392059 Msa0485670:CDS
CTGTGTCTGTTAAGGTTGTG+AGG 0.570139 3_4:-3391672 None:intergenic
AAACTCAAGAAGCTATACAT+TGG 0.574044 3_4:+3395140 Msa0485670:three_prime_UTR
CCACACTTGATTTATATCAA+AGG 0.577105 3_4:+3395086 Msa0485670:CDS
GGGAGTATTTATGTGGATTG+TGG 0.580648 3_4:+3394242 Msa0485670:CDS
GAGGAGAAGCAAATAAAGGA+AGG 0.581506 3_4:+3393154 Msa0485670:CDS
TGGATGAATCAGGAGAAAGA+TGG 0.581728 3_4:+3395160 Msa0485670:three_prime_UTR
CACCTGCTATAGAATATACA+TGG 0.582028 3_4:-3392922 None:intergenic
GAATTCGCTTCATAATTCAA+AGG 0.583357 3_4:+3392631 Msa0485670:CDS
GTGTGTTTGTTTGTCTGATG+AGG 0.586309 3_4:+3392202 Msa0485670:CDS
AGAATACTGTGATCGTGAGA+TGG 0.587940 3_4:+3394442 Msa0485670:CDS
GCGACAGACGAAACTCTAGC+AGG 0.588210 3_4:-3393495 None:intergenic
TCTTGATACATCCAACCGAC+TGG 0.590177 3_4:-3393022 None:intergenic
ACAATAGTATGTATATACAT+TGG 0.593778 3_4:+3395254 Msa0485670:three_prime_UTR
TCGAGTATAAACCAGTCGGT+TGG 0.595194 3_4:+3393011 Msa0485670:CDS
TGTATATTCTATAGCAGGTG+TGG 0.597303 3_4:+3392925 Msa0485670:CDS
TGGTCTTCCGTTGATGATGT+TGG 0.597719 3_4:+3393424 Msa0485670:CDS
AATGATGAATGATCTGAACT+TGG 0.598053 3_4:-3391341 None:intergenic
TAGAAATGCGCGATTGAACG+CGG 0.599502 3_4:+3391968 Msa0485670:CDS
TCGTGACGAGGCTGTTACAA+GGG 0.600278 3_4:+3393965 Msa0485670:CDS
TAGCCTCTCCTGCATTGAGG+TGG 0.600521 3_4:-3393907 None:intergenic
TTGAATGCAATGCTTTGTGG+TGG 0.602718 3_4:+3392302 Msa0485670:CDS
AATTAGCCTCTCCTGCATTG+AGG 0.603715 3_4:-3393910 None:intergenic
CCTTTGCGAAGTCCGTCTGA+AGG 0.604404 3_4:-3394119 None:intergenic
GGTGGCAATGGAAGAAAGCA+TGG 0.605072 3_4:+3392742 Msa0485670:CDS
GGATGCAATTATACCAACAA+TGG 0.606647 3_4:+3393404 Msa0485670:CDS
ATAAATCAAGTGTGGCTGCA+TGG 0.607359 3_4:-3395078 None:intergenic
AACCTGCTATGCTCAGAAAG+TGG 0.607602 3_4:-3391145 None:intergenic
TGGTAAAATAGAACTTGCAA+AGG 0.609009 3_4:+3394262 Msa0485670:CDS
GTTTGTTCAATGGATTGTGG+TGG 0.609723 3_4:+3392062 Msa0485670:CDS
TAGAGCATTGGAGAAAGTCG+AGG 0.609855 3_4:+3393135 Msa0485670:CDS
ATGGTTGAGATTTGAAAGAA+GGG 0.611827 3_4:+3392022 Msa0485670:CDS
ATTACATAACTTTACATGGG+AGG 0.612020 3_4:+3393314 Msa0485670:CDS
AGAAGGGATGATGAACTTGT+TGG 0.612740 3_4:+3392038 Msa0485670:CDS
GAAAGCGGAAAGTAATGCCT+CGG 0.613020 3_4:+3394403 Msa0485670:CDS
CTTTAGCAGAACTCTATCAA+AGG 0.615791 3_4:+3391844 Msa0485670:CDS
GATTTCTAGAATCCAAAATG+TGG 0.618681 3_4:+3392324 Msa0485670:CDS
GACATACCCTTATAGATACA+GGG 0.619740 3_4:+3394508 Msa0485670:CDS
TGCAGGCATTGAATAACATG+GGG 0.620435 3_4:+3394222 Msa0485670:intron
TTTGAATGAAAATAAACTTG+GGG 0.625471 3_4:-3391501 None:intergenic
TGATCGTTTCTCATATGCCG+AGG 0.627833 3_4:-3394420 None:intergenic
CTAATTACATAACTTTACAT+GGG 0.634474 3_4:+3393311 Msa0485670:CDS
ACATTGGTATATATATCATG+TGG 0.634650 3_4:+3395270 Msa0485670:three_prime_UTR
CAAAGAACCAACATCATCAA+CGG 0.639146 3_4:-3393431 None:intergenic
AGGCACACAAGAGCTCATCA+AGG 0.640321 3_4:+3394311 Msa0485670:CDS
GCACTTAAATGTCCTTCAGA+CGG 0.641860 3_4:+3394107 Msa0485670:CDS
GGTCTAGCATTGCATCAACT+AGG 0.648853 3_4:+3392830 Msa0485670:CDS
GCTGCAGAGAGGTGGCAGAA+GGG 0.651712 3_4:+3392809 Msa0485670:CDS
CGCGGAAGATGTGATGTCAA+AGG 0.653078 3_4:+3391986 Msa0485670:CDS
CCTTCAGACGGACTTCGCAA+AGG 0.656665 3_4:+3394119 Msa0485670:CDS
TTATACGGAAAAGAAAGCGA+AGG 0.657585 3_4:-3393109 None:intergenic
CGATACTGGCTATCGTGACG+AGG 0.657764 3_4:+3393953 Msa0485670:CDS
AAGAGTGTGCTGCAGAGAGG+TGG 0.657914 3_4:+3392801 Msa0485670:CDS
ATTCCACCTCAATGCAGGAG+AGG 0.663137 3_4:+3393904 Msa0485670:CDS
TGTCACTTTCTCAGTCTGTG+TGG 0.663683 3_4:-3391880 None:intergenic
AGGAGAAGCAAATAAAGGAA+GGG 0.664981 3_4:+3393155 Msa0485670:CDS
GTAATGGATTATGCTCAGAA+GGG 0.673024 3_4:+3392363 Msa0485670:CDS
CCTTTGATATAAATCAAGTG+TGG 0.677348 3_4:-3395086 None:intergenic
CTGTGATCGTGAGATGGCGA+AGG 0.680984 3_4:+3394448 Msa0485670:CDS
TATGCATTGTAGGAAACCAG+AGG 0.694031 3_4:-3395390 None:intergenic
GCTAGAACAAAGCATAAACA+AGG 0.694172 3_4:+3392947 Msa0485670:CDS
TCCCATTGACTCGTAAAACG+CGG 0.712479 3_4:-3395002 None:intergenic
ATATTCGAGTATAAACCAGT+CGG 0.714478 3_4:+3393007 Msa0485670:CDS
GTTCTGCTAAAGTCTCAACA+AGG 0.716421 3_4:-3391833 None:intergenic
TGAAAGAGTGTGCTGCAGAG+AGG 0.724764 3_4:+3392798 Msa0485670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTAATAATGTATGTTTT+TGG - chr3_4:3391273-3391292 None:intergenic 15.0%
!!! TGATAAACGATTATTTTATA+AGG - chr3_4:3394585-3394604 None:intergenic 15.0%
!! TTTGTTTATAGTATCAAATA+TGG + chr3_4:3395199-3395218 Msa0485670:three_prime_UTR 15.0%
!! CAAAGAATGATATGAAAAAT+TGG - chr3_4:3391247-3391266 None:intergenic 20.0%
!! TTTGAATGAAAATAAACTTG+GGG - chr3_4:3391504-3391523 None:intergenic 20.0%
!! CTTTGAATGAAAATAAACTT+GGG - chr3_4:3391505-3391524 None:intergenic 20.0%
!! ACTTTGAATGAAAATAAACT+TGG - chr3_4:3391506-3391525 None:intergenic 20.0%
!!! AAAATCAATTTTCCACATTT+TGG - chr3_4:3392339-3392358 None:intergenic 20.0%
!!! AAAATTGATTTTTCAGGTAA+TGG + chr3_4:3392347-3392366 Msa0485670:CDS 20.0%
!! ATTAACTTATAAGCTGAATA+TGG - chr3_4:3392977-3392996 None:intergenic 20.0%
!! CTAATTACATAACTTTACAT+GGG + chr3_4:3393311-3393330 Msa0485670:CDS 20.0%
!! AAATGATTTCTGAATTTCAA+TGG - chr3_4:3394000-3394019 None:intergenic 20.0%
!! CTACAACAAAATATAAAAGA+AGG + chr3_4:3394619-3394638 Msa0485670:intron 20.0%
!!! AAGCTATCTTGAAAATTTTA+TGG + chr3_4:3394679-3394698 Msa0485670:intron 20.0%
!! ACAATAGTATGTATATACAT+TGG + chr3_4:3395254-3395273 Msa0485670:three_prime_UTR 20.0%
!! AATATGAACCTTTGAGAAAA+GGG - chr3_4:3391476-3391495 None:intergenic 25.0%
!! AAATATGAACCTTTGAGAAA+AGG - chr3_4:3391477-3391496 None:intergenic 25.0%
! CAAAGAAGAATTTGGAAAAT+GGG + chr3_4:3392105-3392124 Msa0485670:CDS 25.0%
! CAGTGATCATTAATTGAAAA+AGG - chr3_4:3392137-3392156 None:intergenic 25.0%
!!! ATGTGGAAAATTGATTTTTC+AGG + chr3_4:3392341-3392360 Msa0485670:CDS 25.0%
! TTTGAATTATGAAGCGAATT+CGG - chr3_4:3392632-3392651 None:intergenic 25.0%
!!! TTTATGTAGTTTTGAGTCAA+AGG + chr3_4:3392664-3392683 Msa0485670:CDS 25.0%
! AAGGAAAAGTTGGAAAATTT+AGG + chr3_4:3392683-3392702 Msa0485670:CDS 25.0%
! AGGAAAAGTTGGAAAATTTA+GGG + chr3_4:3392684-3392703 Msa0485670:CDS 25.0%
!!! TTCTTGTTGTACTATTTTCT+CGG + chr3_4:3392716-3392735 Msa0485670:CDS 25.0%
!!! AAGAGAAAAAGGTTTTGATT+TGG + chr3_4:3393066-3393085 Msa0485670:CDS 25.0%
! TCCAATGCTCTATATTTATA+CGG - chr3_4:3393127-3393146 None:intergenic 25.0%
! GCTAATTACATAACTTTACA+TGG + chr3_4:3393310-3393329 Msa0485670:CDS 25.0%
! TAGGTCAAAATTGAAAGATT+AGG - chr3_4:3393573-3393592 None:intergenic 25.0%
! ATAACATAAGAAGAAGATTC+AGG - chr3_4:3394071-3394090 None:intergenic 25.0%
! GTAATAATCGCTTATTTCAA+AGG - chr3_4:3394859-3394878 None:intergenic 25.0%
! GTTTATAGTATCAAATATGG+AGG + chr3_4:3395202-3395221 Msa0485670:three_prime_UTR 25.0%
! ACATTGGTATATATATCATG+TGG + chr3_4:3395270-3395289 Msa0485670:three_prime_UTR 25.0%
! TGTAACTTGTATAACTGATC+AGG - chr3_4:3391173-3391192 None:intergenic 30.0%
AATGATGAATGATCTGAACT+TGG - chr3_4:3391344-3391363 None:intergenic 30.0%
!!! AGCAATAAAAGTGCTTTTAC+AGG - chr3_4:3391370-3391389 None:intergenic 30.0%
! ACTTTTATTGCTAGAAAGAG+AGG + chr3_4:3391378-3391397 Msa0485670:five_prime_UTR 30.0%
! AATGAAAACCCTTTTCTCAA+AGG + chr3_4:3391465-3391484 Msa0485670:five_prime_UTR 30.0%
! AGTTCAACACTTTAGCTTAA+AGG + chr3_4:3391523-3391542 Msa0485670:five_prime_UTR 30.0%
! GTTCAACACTTTAGCTTAAA+GGG + chr3_4:3391524-3391543 Msa0485670:five_prime_UTR 30.0%
! AGTTCTTCATCTGAAACTAA+TGG + chr3_4:3391633-3391652 Msa0485670:CDS 30.0%
ATATTGTTCTGTGTCTGTTA+AGG - chr3_4:3391683-3391702 None:intergenic 30.0%
AACAAGATTTGCAAATTCTG+AGG - chr3_4:3391748-3391767 None:intergenic 30.0%
TATAGATGGTTCAATAGTGT+CGG - chr3_4:3391790-3391809 None:intergenic 30.0%
TTAAGGTAAGGTTCTATAGA+TGG - chr3_4:3391804-3391823 None:intergenic 30.0%
! GAACTTTTCTCTGTTTTGTA+TGG + chr3_4:3391912-3391931 Msa0485670:CDS 30.0%
ATGGTTGAGATTTGAAAGAA+GGG + chr3_4:3392022-3392041 Msa0485670:CDS 30.0%
TGAATGTCCAAAGAAGAATT+TGG + chr3_4:3392097-3392116 Msa0485670:CDS 30.0%
! CCATTTTCCAAATTCTTCTT+TGG - chr3_4:3392107-3392126 None:intergenic 30.0%
CCAAAGAAGAATTTGGAAAA+TGG + chr3_4:3392104-3392123 Msa0485670:CDS 30.0%
!!! AGTGATGTTTTGTTTTGTGT+TGG + chr3_4:3392227-3392246 Msa0485670:CDS 30.0%
!!! GTGATGTTTTGTTTTGTGTT+GGG + chr3_4:3392228-3392247 Msa0485670:CDS 30.0%
AAGAAATCAAGTGTGTAAGA+TGG + chr3_4:3392255-3392274 Msa0485670:CDS 30.0%
!! GATTTCTAGAATCCAAAATG+TGG + chr3_4:3392324-3392343 Msa0485670:CDS 30.0%
!! AGAAGCTCTAAAACAGTATT+AGG - chr3_4:3392440-3392459 None:intergenic 30.0%
ATCTTCATGTGATTCTCATT+TGG + chr3_4:3392496-3392515 Msa0485670:CDS 30.0%
! GCATTGATACTTATTGAGTA+TGG + chr3_4:3392545-3392564 Msa0485670:CDS 30.0%
GATACTTATTGAGTATGGAT+TGG + chr3_4:3392550-3392569 Msa0485670:CDS 30.0%
! TTGCTTGCAAATTTTTCTCA+GGG + chr3_4:3392601-3392620 Msa0485670:CDS 30.0%
GAATTCGCTTCATAATTCAA+AGG + chr3_4:3392631-3392650 Msa0485670:CDS 30.0%
!! TTTTGAGTCAAAGGAAAAGT+TGG + chr3_4:3392673-3392692 Msa0485670:CDS 30.0%
ATATTCGAGTATAAACCAGT+CGG + chr3_4:3393007-3393026 Msa0485670:CDS 30.0%
TACAATATGGGAAGAGAAAA+AGG + chr3_4:3393055-3393074 Msa0485670:CDS 30.0%
TCCGTATAAATATAGAGCAT+TGG + chr3_4:3393123-3393142 Msa0485670:CDS 30.0%
ATGGAGTTAGATAAGTTTCT+AGG + chr3_4:3393181-3393200 Msa0485670:CDS 30.0%
! AGTTATGTAATTAGCCTCTA+TGG - chr3_4:3393305-3393324 None:intergenic 30.0%
ATTACATAACTTTACATGGG+AGG + chr3_4:3393314-3393333 Msa0485670:CDS 30.0%
TAGAATTCAGAAGAAGAATC+AGG + chr3_4:3393372-3393391 Msa0485670:CDS 30.0%
!! CACATATGCTTTTAGGAAAA+AGG - chr3_4:3394027-3394046 None:intergenic 30.0%
TGGTAAAATAGAACTTGCAA+AGG + chr3_4:3394262-3394281 Msa0485670:CDS 30.0%
TCATCAGAAAAATCAACGAA+AGG + chr3_4:3394349-3394368 Msa0485670:CDS 30.0%
CCTTTGATATAAATCAAGTG+TGG - chr3_4:3395089-3395108 None:intergenic 30.0%
CCACACTTGATTTATATCAA+AGG + chr3_4:3395086-3395105 Msa0485670:CDS 30.0%
AAACTCAAGAAGCTATACAT+TGG + chr3_4:3395140-3395159 Msa0485670:three_prime_UTR 30.0%
ATGTAATGTAACTGTACAAG+AGG - chr3_4:3395351-3395370 None:intergenic 30.0%
TATAAAGAGATTCATACCTC+TGG + chr3_4:3395374-3395393 Msa0485670:three_prime_UTR 30.0%
! ACTTTAGCTTAAAGGGTTGT+TGG + chr3_4:3391531-3391550 Msa0485670:five_prime_UTR 35.0%
TTAAAGGGTTGTTGGAAAAG+TGG + chr3_4:3391539-3391558 Msa0485670:five_prime_UTR 35.0%
GACACAGAACAATATTGTCT+TGG + chr3_4:3391688-3391707 Msa0485670:CDS 35.0%
!! AGGTTGATTGGTTTAAGGTA+AGG - chr3_4:3391816-3391835 None:intergenic 35.0%
!! CAACAAGGTTGATTGGTTTA+AGG - chr3_4:3391821-3391840 None:intergenic 35.0%
! AAAGTCTCAACAAGGTTGAT+TGG - chr3_4:3391828-3391847 None:intergenic 35.0%
CTTTAGCAGAACTCTATCAA+AGG + chr3_4:3391844-3391863 Msa0485670:CDS 35.0%
! TTCTCTGTTTTGTATGGTCT+TGG + chr3_4:3391918-3391937 Msa0485670:CDS 35.0%
CATGGTTGAGATTTGAAAGA+AGG + chr3_4:3392021-3392040 Msa0485670:CDS 35.0%
! ACTTGTTGGTGTTTGTTCAA+TGG + chr3_4:3392052-3392071 Msa0485670:CDS 35.0%
!! GTAATGGATTATGCTCAGAA+GGG + chr3_4:3392363-3392382 Msa0485670:CDS 35.0%
TTACAGCAGAACAAAAAGAC+TGG + chr3_4:3392403-3392422 Msa0485670:CDS 35.0%
! TCTCATTTGGCTTCAATTGT+TGG + chr3_4:3392509-3392528 Msa0485670:CDS 35.0%
! CTTGCTTGCAAATTTTTCTC+AGG + chr3_4:3392600-3392619 Msa0485670:CDS 35.0%
TTCGATGAAGCAGTTGAATT+AGG + chr3_4:3392899-3392918 Msa0485670:CDS 35.0%
CACCTGCTATAGAATATACA+TGG - chr3_4:3392925-3392944 None:intergenic 35.0%
TGTATATTCTATAGCAGGTG+TGG + chr3_4:3392925-3392944 Msa0485670:CDS 35.0%
GCTAGAACAAAGCATAAACA+AGG + chr3_4:3392947-3392966 Msa0485670:CDS 35.0%
TTATACGGAAAAGAAAGCGA+AGG - chr3_4:3393112-3393131 None:intergenic 35.0%
AGGAGAAGCAAATAAAGGAA+GGG + chr3_4:3393155-3393174 Msa0485670:CDS 35.0%
GCAAATAAAGGAAGGGATTA+TGG + chr3_4:3393162-3393181 Msa0485670:CDS 35.0%
! ACCTGATTGTTTAGAGTTGA+GGG + chr3_4:3393216-3393235 Msa0485670:CDS 35.0%
!! TAGAGCTTTGTTAACCATAG+AGG + chr3_4:3393288-3393307 Msa0485670:CDS 35.0%
GGATGCAATTATACCAACAA+TGG + chr3_4:3393404-3393423 Msa0485670:CDS 35.0%
CAAAGAACCAACATCATCAA+CGG - chr3_4:3393434-3393453 None:intergenic 35.0%
! AGTGCTACTGCTACATATAT+AGG - chr3_4:3393592-3393611 None:intergenic 35.0%
CGCGTGTTAGTAAATACAAT+TGG + chr3_4:3393787-3393806 Msa0485670:intron 35.0%
GCACAGATTAAACTGTCAAA+AGG + chr3_4:3393848-3393867 Msa0485670:intron 35.0%
AGAGGCTAATTTATGAAGGA+TGG + chr3_4:3393922-3393941 Msa0485670:CDS 35.0%
! CTGCTAACACATATGCTTTT+AGG - chr3_4:3394034-3394053 None:intergenic 35.0%
! TGTCTTGTGCAATATTTTGC+AGG + chr3_4:3394205-3394224 Msa0485670:intron 35.0%
!! TTTGCAGGCATTGAATAACA+TGG + chr3_4:3394220-3394239 Msa0485670:intron 35.0%
!! TTGCAGGCATTGAATAACAT+GGG + chr3_4:3394221-3394240 Msa0485670:intron 35.0%
!! TAACATGGGGAGTATTTATG+TGG + chr3_4:3394235-3394254 Msa0485670:CDS 35.0%
ACAACAATGCACTTGCAATT+AGG + chr3_4:3394291-3394310 Msa0485670:CDS 35.0%
! CTATAAGGGTATGTCCTTAA+AGG - chr3_4:3394503-3394522 None:intergenic 35.0%
GACATACCCTTATAGATACA+GGG + chr3_4:3394508-3394527 Msa0485670:CDS 35.0%
GCTTTAATCAATGTGCAGAT+AGG - chr3_4:3394563-3394582 None:intergenic 35.0%
GCTTATGAACATGTTGTAAG+TGG + chr3_4:3394718-3394737 Msa0485670:intron 35.0%
AAGCAGTTGTAAGACTTTCT+AGG - chr3_4:3394758-3394777 None:intergenic 35.0%
ATGTGAGAGACTATTTGGAT+TGG - chr3_4:3394806-3394825 None:intergenic 35.0%
TCATCATGTGAGAGACTATT+TGG - chr3_4:3394811-3394830 None:intergenic 35.0%
! AGATGAAGCATTTGAAGATC+TGG - chr3_4:3394977-3394996 None:intergenic 35.0%
AGCTATACATTGGATGAATC+AGG + chr3_4:3395150-3395169 Msa0485670:three_prime_UTR 35.0%
TCTGTTAAGGTTGTGAGGTT+TGG - chr3_4:3391670-3391689 None:intergenic 40.0%
GTTCTGCTAAAGTCTCAACA+AGG - chr3_4:3391836-3391855 None:intergenic 40.0%
AGAAGGGATGATGAACTTGT+TGG + chr3_4:3392038-3392057 Msa0485670:CDS 40.0%
!! GGTGTTTGTTCAATGGATTG+TGG + chr3_4:3392059-3392078 Msa0485670:CDS 40.0%
!! GTTTGTTCAATGGATTGTGG+TGG + chr3_4:3392062-3392081 Msa0485670:CDS 40.0%
GTGTGTTTGTTTGTCTGATG+AGG + chr3_4:3392202-3392221 Msa0485670:CDS 40.0%
!! CCACAAAGCATTGCATTCAA+TGG - chr3_4:3392302-3392321 None:intergenic 40.0%
CCATTGAATGCAATGCTTTG+TGG + chr3_4:3392299-3392318 Msa0485670:CDS 40.0%
TTGAATGCAATGCTTTGTGG+TGG + chr3_4:3392302-3392321 Msa0485670:CDS 40.0%
!! GGTAATGGATTATGCTCAGA+AGG + chr3_4:3392362-3392381 Msa0485670:CDS 40.0%
! AGCTTCTGTCATTTGCCAAT+AGG + chr3_4:3392453-3392472 Msa0485670:CDS 40.0%
!!! TGCCAATAGGTTTTGTTGTG+AGG + chr3_4:3392466-3392485 Msa0485670:CDS 40.0%
CTCCTCACAACAAAACCTAT+TGG - chr3_4:3392471-3392490 None:intergenic 40.0%
GAAAACAACAGCGATGTTGT+TGG + chr3_4:3392769-3392788 Msa0485670:CDS 40.0%
GGCCATGTATATTCTATAGC+AGG + chr3_4:3392920-3392939 Msa0485670:CDS 40.0%
! AGAGCGAGCATTGTACAATA+TGG + chr3_4:3393042-3393061 Msa0485670:CDS 40.0%
! GAGCGAGCATTGTACAATAT+GGG + chr3_4:3393043-3393062 Msa0485670:CDS 40.0%
AGTCGAGGAGAAGCAAATAA+AGG + chr3_4:3393150-3393169 Msa0485670:CDS 40.0%
GAGGAGAAGCAAATAAAGGA+AGG + chr3_4:3393154-3393173 Msa0485670:CDS 40.0%
! CACCTGATTGTTTAGAGTTG+AGG + chr3_4:3393215-3393234 Msa0485670:CDS 40.0%
! ATTGTTTAGAGTTGAGGGCT+TGG + chr3_4:3393221-3393240 Msa0485670:CDS 40.0%
ACTTTACATGGGAGGATCAA+AGG + chr3_4:3393322-3393341 Msa0485670:CDS 40.0%
GAGGATCAAAGGTGAATGTT+TGG + chr3_4:3393333-3393352 Msa0485670:CDS 40.0%
AGAAGAATCAGGCTGATTGT+TGG + chr3_4:3393383-3393402 Msa0485670:CDS 40.0%
!! CGTTGATGATGTTGGTTCTT+TGG + chr3_4:3393432-3393451 Msa0485670:CDS 40.0%
CTAAAGATGCTTACCTCAAG+AGG - chr3_4:3393525-3393544 None:intergenic 40.0%
CTATGTGTGAGTATCATGTC+TGG + chr3_4:3393713-3393732 Msa0485670:intron 40.0%
CAGGAGAGGCTAATTTATGA+AGG + chr3_4:3393918-3393937 Msa0485670:CDS 40.0%
! GGATGGATTCTATACGATAC+TGG + chr3_4:3393939-3393958 Msa0485670:CDS 40.0%
GCACTTAAATGTCCTTCAGA+CGG + chr3_4:3394107-3394126 Msa0485670:CDS 40.0%
!! TGCAGGCATTGAATAACATG+GGG + chr3_4:3394222-3394241 Msa0485670:intron 40.0%
!! GGGAGTATTTATGTGGATTG+TGG + chr3_4:3394242-3394261 Msa0485670:CDS 40.0%
! GACAATGCTGATTGAGAAAG+CGG + chr3_4:3394388-3394407 Msa0485670:CDS 40.0%
AGAATACTGTGATCGTGAGA+TGG + chr3_4:3394442-3394461 Msa0485670:CDS 40.0%
CAACACACCTTGATCCTTTA+AGG + chr3_4:3394486-3394505 Msa0485670:CDS 40.0%
GGTATGTCCTTAAAGGATCA+AGG - chr3_4:3394496-3394515 None:intergenic 40.0%
GGACATACCCTTATAGATAC+AGG + chr3_4:3394507-3394526 Msa0485670:CDS 40.0%
! GGTTCAACTGTTTTCGTGTA+AGG + chr3_4:3394640-3394659 Msa0485670:intron 40.0%
! GTTGTAAGACTTTCTAGGAG+AGG - chr3_4:3394753-3394772 None:intergenic 40.0%
! GCATATATGACTAGTGCTGA+TGG + chr3_4:3394895-3394914 Msa0485670:intron 40.0%
AGCAGTAGAAGAACTCACTA+AGG + chr3_4:3394937-3394956 Msa0485670:CDS 40.0%
TAAATCAAGTGTGGCTGCAT+GGG - chr3_4:3395080-3395099 None:intergenic 40.0%
ATAAATCAAGTGTGGCTGCA+TGG - chr3_4:3395081-3395100 None:intergenic 40.0%
TGGATGAATCAGGAGAAAGA+TGG + chr3_4:3395160-3395179 Msa0485670:three_prime_UTR 40.0%
CTCTCTCTCTCTCTCTCTAA+TGG + chr3_4:3391111-3391130 Msa0485670:five_prime_UTR 45.0%
AACCTGCTATGCTCAGAAAG+TGG - chr3_4:3391148-3391167 None:intergenic 45.0%
CTGTGTCTGTTAAGGTTGTG+AGG - chr3_4:3391675-3391694 None:intergenic 45.0%
!! GGTTCAATAGTGTCGGTTGA+AGG - chr3_4:3391783-3391802 None:intergenic 45.0%
!! TGTCACTTTCTCAGTCTGTG+TGG - chr3_4:3391883-3391902 None:intergenic 45.0%
GACATCTTCTGAGTAGCTTC+TGG - chr3_4:3391947-3391966 None:intergenic 45.0%
TAGAAATGCGCGATTGAACG+CGG + chr3_4:3391968-3391987 Msa0485670:CDS 45.0%
CAAAGGTTGTGTTGTCTGCA+TGG + chr3_4:3392003-3392022 Msa0485670:CDS 45.0%
! GTTGTACTATTTTCTCGGCC+AGG + chr3_4:3392721-3392740 Msa0485670:CDS 45.0%
GGTCTAGCATTGCATCAACT+AGG + chr3_4:3392830-3392849 Msa0485670:CDS 45.0%
TCGAGTATAAACCAGTCGGT+TGG + chr3_4:3393011-3393030 Msa0485670:CDS 45.0%
TCTTGATACATCCAACCGAC+TGG - chr3_4:3393025-3393044 None:intergenic 45.0%
!! TAGAGCATTGGAGAAAGTCG+AGG + chr3_4:3393135-3393154 Msa0485670:CDS 45.0%
GCCCTCAACTCTAAACAATC+AGG - chr3_4:3393220-3393239 None:intergenic 45.0%
CATCAACGGAAGACCATTGT+TGG - chr3_4:3393420-3393439 None:intergenic 45.0%
!! TGGTCTTCCGTTGATGATGT+TGG + chr3_4:3393424-3393443 Msa0485670:CDS 45.0%
AAACCATTCCACCTCAATGC+AGG + chr3_4:3393899-3393918 Msa0485670:CDS 45.0%
! AATTAGCCTCTCCTGCATTG+AGG - chr3_4:3393913-3393932 None:intergenic 45.0%
GAAAGCGGAAAGTAATGCCT+CGG + chr3_4:3394403-3394422 Msa0485670:CDS 45.0%
TGATCGTTTCTCATATGCCG+AGG - chr3_4:3394423-3394442 None:intergenic 45.0%
CTGCTGCCCTGTATCTATAA+GGG - chr3_4:3394517-3394536 None:intergenic 45.0%
!! TCCCATTGACTCGTAAAACG+CGG - chr3_4:3395005-3395024 None:intergenic 45.0%
!! TGCCACTTTCTGAGCATAGC+AGG + chr3_4:3391143-3391162 Msa0485670:five_prime_UTR 50.0%
CGCGGAAGATGTGATGTCAA+AGG + chr3_4:3391986-3392005 Msa0485670:CDS 50.0%
! GTACTATTTTCTCGGCCAGG+TGG + chr3_4:3392724-3392743 Msa0485670:CDS 50.0%
TGCTTTCTTCCATTGCCACC+TGG - chr3_4:3392742-3392761 None:intergenic 50.0%
GGTGGCAATGGAAGAAAGCA+TGG + chr3_4:3392742-3392761 Msa0485670:CDS 50.0%
! TGAAAGAGTGTGCTGCAGAG+AGG + chr3_4:3392798-3392817 Msa0485670:CDS 50.0%
CAGATGCTAGAGAATGAGCC+TGG + chr3_4:3393466-3393485 Msa0485670:CDS 50.0%
AACTCTAGCAGGCTCTTTCC+AGG - chr3_4:3393487-3393506 None:intergenic 50.0%
CGACACGATTCTGACACATG+TGG + chr3_4:3393649-3393668 Msa0485670:intron 50.0%
GTGCAGCATAAGCGCATCTT+TGG - chr3_4:3393832-3393851 None:intergenic 50.0%
TCTCCTGCATTGAGGTGGAA+TGG - chr3_4:3393905-3393924 None:intergenic 50.0%
ATTCCACCTCAATGCAGGAG+AGG + chr3_4:3393904-3393923 Msa0485670:CDS 50.0%
ATCGTGACGAGGCTGTTACA+AGG + chr3_4:3393964-3393983 Msa0485670:CDS 50.0%
TCGTGACGAGGCTGTTACAA+GGG + chr3_4:3393965-3393984 Msa0485670:CDS 50.0%
AGGCACACAAGAGCTCATCA+AGG + chr3_4:3394311-3394330 Msa0485670:CDS 50.0%
CACAAGAGCTCATCAAGGTC+TGG + chr3_4:3394316-3394335 Msa0485670:CDS 50.0%
CCTGCTGCCCTGTATCTATA+AGG - chr3_4:3394518-3394537 None:intergenic 50.0%
CCTTATAGATACAGGGCAGC+AGG + chr3_4:3394515-3394534 Msa0485670:CDS 50.0%
! AGCCGCGTTTTACGAGTCAA+TGG + chr3_4:3395000-3395019 Msa0485670:CDS 50.0%
! GCCGCGTTTTACGAGTCAAT+GGG + chr3_4:3395001-3395020 Msa0485670:CDS 50.0%
! TTTTCTCGGCCAGGTGGCAA+TGG + chr3_4:3392730-3392749 Msa0485670:CDS 55.0%
! AAGAGTGTGCTGCAGAGAGG+TGG + chr3_4:3392801-3392820 Msa0485670:CDS 55.0%
GCGACAGACGAAACTCTAGC+AGG - chr3_4:3393498-3393517 None:intergenic 55.0%
GTCTGTCGCTACTCCTCTTG+AGG + chr3_4:3393509-3393528 Msa0485670:CDS 55.0%
AGGCTGCAATGCGCAGTTTG+CGG + chr3_4:3393868-3393887 Msa0485670:CDS 55.0%
TAGCCTCTCCTGCATTGAGG+TGG - chr3_4:3393910-3393929 None:intergenic 55.0%
! CGATACTGGCTATCGTGACG+AGG + chr3_4:3393953-3393972 Msa0485670:CDS 55.0%
CCTTTGCGAAGTCCGTCTGA+AGG - chr3_4:3394122-3394141 None:intergenic 55.0%
! CCTTCAGACGGACTTCGCAA+AGG + chr3_4:3394119-3394138 Msa0485670:CDS 55.0%
CTGTGATCGTGAGATGGCGA+AGG + chr3_4:3394448-3394467 Msa0485670:CDS 55.0%
TCAAGTGTGGCTGCATGGGT+TGG - chr3_4:3395076-3395095 None:intergenic 55.0%
TGCTGCAGAGAGGTGGCAGA+AGG + chr3_4:3392808-3392827 Msa0485670:CDS 60.0%
GCTGCAGAGAGGTGGCAGAA+GGG + chr3_4:3392809-3392828 Msa0485670:CDS 60.0%
TGCAATGCGCAGTTTGCGGC+TGG + chr3_4:3393872-3393891 Msa0485670:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 3391096 3395406 3391096 ID=Msa0485670;Name=Msa0485670
chr3_4 mRNA 3391096 3395406 3391096 ID=Msa0485670-mRNA-1;Parent=Msa0485670;Name=Msa0485670-mRNA-1;_AED=0.02;_eAED=0.02;_QI=483|1|1|1|1|1|4|277|924
chr3_4 exon 3391096 3393530 3391096 ID=Msa0485670-mRNA-1:exon:1233;Parent=Msa0485670-mRNA-1
chr3_4 exon 3393854 3394145 3393854 ID=Msa0485670-mRNA-1:exon:1234;Parent=Msa0485670-mRNA-1
chr3_4 exon 3394227 3394536 3394227 ID=Msa0485670-mRNA-1:exon:1235;Parent=Msa0485670-mRNA-1
chr3_4 exon 3394909 3395406 3394909 ID=Msa0485670-mRNA-1:exon:1236;Parent=Msa0485670-mRNA-1
chr3_4 five_prime_UTR 3391096 3391578 3391096 ID=Msa0485670-mRNA-1:five_prime_utr;Parent=Msa0485670-mRNA-1
chr3_4 CDS 3391579 3393530 3391579 ID=Msa0485670-mRNA-1:cds;Parent=Msa0485670-mRNA-1
chr3_4 CDS 3393854 3394145 3393854 ID=Msa0485670-mRNA-1:cds;Parent=Msa0485670-mRNA-1
chr3_4 CDS 3394227 3394536 3394227 ID=Msa0485670-mRNA-1:cds;Parent=Msa0485670-mRNA-1
chr3_4 CDS 3394909 3395129 3394909 ID=Msa0485670-mRNA-1:cds;Parent=Msa0485670-mRNA-1
chr3_4 three_prime_UTR 3395130 3395406 3395130 ID=Msa0485670-mRNA-1:three_prime_utr;Parent=Msa0485670-mRNA-1
Gene Sequence

>Msa0485670

ATGCGTAGTTTGAAGATTGTTGAACGTTTTAAGAGTATTCAAGTTCATGCTCTTAGTTCTTCATCTGAAACTAATGGTGATAGCAAAACCAAACCTCACAACCTTAACAGACACAGAACAATATTGTCTTGGTCAAAATCAAAATTCAACAACAGTAACACAAAAACCTCAGAATTTGCAAATCTTGTTTCTCTTCAGTTACCTTCAACCGACACTATTGAACCATCTATAGAACCTTACCTTAAACCAATCAACCTTGTTGAGACTTTAGCAGAACTCTATCAAAGGATAGAGTTTTGCTCCACACAGACTGAGAAAGTGACACTTTTTGTTGAACTTTTCTCTGTTTTGTATGGTCTTGGAGACCAGAAGCTACTCAGAAGATGTCTTAGAAATGCGCGATTGAACGCGGAAGATGTGATGTCAAAGGTTGTGTTGTCTGCATGGTTGAGATTTGAAAGAAGGGATGATGAACTTGTTGGTGTTTGTTCAATGGATTGTGGTGGTTATAATATTCTTGAATGTCCAAAGAAGAATTTGGAAAATGGGTTTAGTCCTTTTTCAATTAATGATCACTGCAAGTGTGAAGAAGAGAAAAAGCATGAAAATTTTGATAATGATGAGTGTGTTTGTTTGTCTGATGAGGAAAGTGATGTTTTGTTTTGTGTTGGGATTGAAGAAATCAAGTGTGTAAGATGGAGAATTGCTTCACTTTCAGAACCATTGAATGCAATGCTTTGTGGTGGATTTCTAGAATCCAAAATGTGGAAAATTGATTTTTCAGGTAATGGATTATGCTCAGAAGGGATGAAAGCAGTTGAATTTTACAGCAGAACAAAAAGACTGGATCTTTTTTGTCCTAATACTGTTTTAGAGCTTCTGTCATTTGCCAATAGGTTTTGTTGTGAGGAGATGAAATCTTCATGTGATTCTCATTTGGCTTCAATTGTTGGAAATGTTGAAGATGCATTGATACTTATTGAGTATGGATTGGAAGAAAGTGCAAAACTTCTTGTAGTTTCTTGCTTGCAAATTTTTCTCAGGGAGCTTCCGAATTCGCTTCATAATTCAAAGGTGATAAATTTTTTATGTAGTTTTGAGTCAAAGGAAAAGTTGGAAAATTTAGGGTGTGCTACTTTCTTGTTGTACTATTTTCTCGGCCAGGTGGCAATGGAAGAAAGCATGGTATCGAAAACAACAGCGATGTTGTTGGAGAGAATGAAAGAGTGTGCTGCAGAGAGGTGGCAGAAGGGTCTAGCATTGCATCAACTAGGATGTGTGTTTCTTGAAAGAAGAGAGTATAAAGAAGCTCAACATTGTTTCGATGAAGCAGTTGAATTAGGCCATGTATATTCTATAGCAGGTGTGGCTAGAACAAAGCATAAACAAGGTCAACCATATTCAGCTTATAAGTTAATTAGTTCACTCATATTCGAGTATAAACCAGTCGGTTGGATGTATCAAGAGCGAGCATTGTACAATATGGGAAGAGAAAAAGGTTTTGATTTGGATTTTGCAACTCAACTCGATCCTTCGCTTTCTTTTCCGTATAAATATAGAGCATTGGAGAAAGTCGAGGAGAAGCAAATAAAGGAAGGGATTATGGAGTTAGATAAGTTTCTAGGATTTAAGCTTTCACCTGATTGTTTAGAGTTGAGGGCTTGGTTGTATATTGCATTAGATGATTATGATAGTGCTATAAGAGATATTAGAGCTTTGTTAACCATAGAGGCTAATTACATAACTTTACATGGGAGGATCAAAGGTGAATGTTTGGTTCAAATTCTTCAAAGTAGAATTCAGAAGAAGAATCAGGCTGATTGTTGGATGCAATTATACCAACAATGGTCTTCCGTTGATGATGTTGGTTCTTTGGCTATTATACATCAGATGCTAGAGAATGAGCCTGGAAAGAGCCTGCTAGAGTTTCGTCTGTCGCTACTCCTCTTGAGATTAAACTGTCAAAAGGCTGCAATGCGCAGTTTGCGGCTGGCAAGAAACCATTCCACCTCAATGCAGGAGAGGCTAATTTATGAAGGATGGATTCTATACGATACTGGCTATCGTGACGAGGCTGTTACAAGGGCTGACAAATCCATTGAAATTCAGAAATCATTTGAAGCCTTTTTCCTAAAAGCATATGTGTTAGCAGATACAAATCTTGATCCTGAATCTTCTTCTTATGTTATTCAGCTTTTGAAAGAAGCACTTAAATGTCCTTCAGACGGACTTCGCAAAGGACAAGCATTGAATAACATGGGGAGTATTTATGTGGATTGTGGTAAAATAGAACTTGCAAAGGAATGCTACAACAATGCACTTGCAATTAGGCACACAAGAGCTCATCAAGGTCTGGCGCGTGTTTATCATCAGAAAAATCAACGAAAGGCTGCATACGATGAGATGACAATGCTGATTGAGAAAGCGGAAAGTAATGCCTCGGCATATGAGAAACGATCAGAATACTGTGATCGTGAGATGGCGAAGGCTGATCTTGATGTTGCAACACACCTTGATCCTTTAAGGACATACCCTTATAGATACAGGGCAGCAGTGCTGATGGATGAGCAAAAAGAAACAGAAGCAGTAGAAGAACTCACTAAGGCTATAAAATTCAAGCCAGATCTTCAAATGCTTCATCTACGAGCCGCGTTTTACGAGTCAATGGGAGATCTATTTTCTGCTCTTAAAGATTGTCAAGCTGCTCTTTGTTTAGATCCAACCCATGCAGCCACACTTGATTTATATCAAAGGATACAAAAGCTGAACTTTTGA
Protein sequence

>Msa0485670

MRSLKIVERFKSIQVHALSSSSETNGDSKTKPHNLNRHRTILSWSKSKFNNSNTKTSEFANLVSLQLPSTDTIEPSIEPYLKPINLVETLAELYQRIEFCSTQTEKVTLFVELFSVLYGLGDQKLLRRCLRNARLNAEDVMSKVVLSAWLRFERRDDELVGVCSMDCGGYNILECPKKNLENGFSPFSINDHCKCEEEKKHENFDNDECVCLSDEESDVLFCVGIEEIKCVRWRIASLSEPLNAMLCGGFLESKMWKIDFSGNGLCSEGMKAVEFYSRTKRLDLFCPNTVLELLSFANRFCCEEMKSSCDSHLASIVGNVEDALILIEYGLEESAKLLVVSCLQIFLRELPNSLHNSKVINFLCSFESKEKLENLGCATFLLYYFLGQVAMEESMVSKTTAMLLERMKECAAERWQKGLALHQLGCVFLERREYKEAQHCFDEAVELGHVYSIAGVARTKHKQGQPYSAYKLISSLIFEYKPVGWMYQERALYNMGREKGFDLDFATQLDPSLSFPYKYRALEKVEEKQIKEGIMELDKFLGFKLSPDCLELRAWLYIALDDYDSAIRDIRALLTIEANYITLHGRIKGECLVQILQSRIQKKNQADCWMQLYQQWSSVDDVGSLAIIHQMLENEPGKSLLEFRLSLLLLRLNCQKAAMRSLRLARNHSTSMQERLIYEGWILYDTGYRDEAVTRADKSIEIQKSFEAFFLKAYVLADTNLDPESSSYVIQLLKEALKCPSDGLRKGQALNNMGSIYVDCGKIELAKECYNNALAIRHTRAHQGLARVYHQKNQRKAAYDEMTMLIEKAESNASAYEKRSEYCDREMAKADLDVATHLDPLRTYPYRYRAAVLMDEQKETEAVEELTKAIKFKPDLQMLHLRAAFYESMGDLFSALKDCQAALCLDPTHAATLDLYQRIQKLNF*