Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0368240 | XP_013460584.1 | 94.333 | 300 | 13 | 1 | 1 | 296 | 1 | 300 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0368240 | sp|Q94AX2|PTST_ARATH | 69.118 | 204 | 63 | 0 | 93 | 296 | 74 | 277 | 1.57e-100 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0368240 | A0A072UZP8 | 94.333 | 300 | 13 | 1 | 1 | 296 | 1 | 300 | 0.0 | 580 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221060 | Msa0368240 | 0.818542 | 1.856495e-52 | -8.615850e-47 |
| Msa0368240 | Msa0388960 | 0.800083 | 1.702109e-48 | -8.615850e-47 |
| Msa0368240 | Msa0620790 | 0.801570 | 8.458995e-49 | -8.615850e-47 |
| Msa0368240 | Msa1423880 | 0.801418 | 9.088066e-49 | -8.615850e-47 |
| Msa0262520 | Msa0368240 | 0.809597 | 1.749392e-50 | -8.615850e-47 |
| Msa0294950 | Msa0368240 | 0.811339 | 7.355154e-51 | -8.615850e-47 |
| Msa0294960 | Msa0368240 | 0.810926 | 9.041551e-51 | -8.615850e-47 |
| Msa0331920 | Msa0368240 | 0.805303 | 1.424846e-49 | -8.615850e-47 |
| Msa0338110 | Msa0368240 | 0.826559 | 2.538674e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0368240 | MtrunA17_Chr3g0110931 | 94.333 | 300 | 13 | 1 | 1 | 296 | 1 | 300 | 0.0 | 580 |
| Msa0368240 | MtrunA17_Chr1g0180511 | 30.876 | 217 | 108 | 9 | 99 | 296 | 428 | 621 | 4.24e-11 | 63.5 |
| Msa0368240 | MtrunA17_Chr5g0415861 | 39.000 | 100 | 53 | 2 | 201 | 295 | 425 | 521 | 5.62e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0368240 | AT5G39790.3 | 67.633 | 207 | 64 | 1 | 93 | 296 | 74 | 280 | 1.01e-99 | 294 |
| Msa0368240 | AT5G39790.1 | 68.627 | 204 | 60 | 1 | 93 | 296 | 74 | 273 | 5.47e-99 | 292 |
| Msa0368240 | AT5G39790.2 | 66.667 | 102 | 30 | 1 | 93 | 194 | 74 | 171 | 4.86e-37 | 131 |
| Msa0368240 | AT1G27070.1 | 39.024 | 82 | 47 | 1 | 214 | 295 | 453 | 531 | 3.92e-12 | 67.0 |
Find 64 sgRNAs with CRISPR-Local
Find 534 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGGAGGTTTCCGTATTT+TGG | 0.104200 | 3_1:-64636070 | Msa0368240:CDS |
| AATCACAAATCTTCCTTATA+AGG | 0.163315 | 3_1:-64634808 | Msa0368240:three_prime_UTR |
| CACCTTGTTAACAGATTAAA+AGG | 0.212881 | 3_1:-64636309 | Msa0368240:intron |
| TTCTCTGCAGTTGTATATAA+AGG | 0.274317 | 3_1:-64636600 | Msa0368240:intron |
| ATCACAAATCTTCCTTATAA+GGG | 0.317058 | 3_1:-64634807 | Msa0368240:three_prime_UTR |
| ACAATTGAATGAGCAAATAA+AGG | 0.317978 | 3_1:-64636111 | Msa0368240:CDS |
| GGAGGTCACGTCTAGAATTC+AGG | 0.319084 | 3_1:+64638575 | None:intergenic |
| CCATCAGAGTGCGCAAGTTA+TGG | 0.325409 | 3_1:-64635171 | Msa0368240:intron |
| AGCTATTTCTTCTGCTAGTC+TGG | 0.328497 | 3_1:+64636386 | None:intergenic |
| GTTAACCCTTCACCAGTAAC+AGG | 0.359890 | 3_1:+64634909 | None:intergenic |
| TGTCTTAGAGCTCGAAGTTC+AGG | 0.370507 | 3_1:-64636543 | Msa0368240:intron |
| TCAACAGAGTTACCTGTTAC+TGG | 0.371155 | 3_1:-64634921 | Msa0368240:CDS |
| CATCAGAGTGCGCAAGTTAT+GGG | 0.371541 | 3_1:-64635170 | Msa0368240:intron |
| TCTGAGTCTATAGATGGATT+AGG | 0.388452 | 3_1:+64638430 | None:intergenic |
| GCAGAAGAAATAGCTAAATC+TGG | 0.399724 | 3_1:-64636378 | Msa0368240:CDS |
| TCGTCTTCTGAGTCTATAGA+TGG | 0.406801 | 3_1:+64638424 | None:intergenic |
| GAAATCAAATTCTTAGTAGA+TGG | 0.435547 | 3_1:-64634957 | Msa0368240:CDS |
| TAGGTGTCATCTAGAAGCTC+AGG | 0.441243 | 3_1:-64638671 | Msa0368240:CDS |
| CTGGTATTCCACAAGGTTCA+AGG | 0.463181 | 3_1:-64636359 | Msa0368240:CDS |
| CAATTGAATGAGCAAATAAA+GGG | 0.463832 | 3_1:-64636110 | Msa0368240:CDS |
| CTGGTGAAAGGTGCTCTCCT+TGG | 0.466889 | 3_1:+64635129 | None:intergenic |
| GTGAAGCCAACCAACAAAAT+CGG | 0.468930 | 3_1:-64637530 | Msa0368240:CDS |
| CACGGCAGTAAGTGTTTGAT+AGG | 0.471148 | 3_1:+64638537 | None:intergenic |
| TCTCAACAACATTGATGCTT+AGG | 0.471977 | 3_1:-64635082 | Msa0368240:CDS |
| AGAACACAATCTATGCAAAC+TGG | 0.473393 | 3_1:-64638490 | Msa0368240:CDS |
| AGATGGATTAGGATTATCTC+TGG | 0.477845 | 3_1:+64638441 | None:intergenic |
| CAAGTTATGGGCAGCTTCGA+TGG | 0.482209 | 3_1:-64635158 | Msa0368240:CDS |
| GAGTTACCTGTTACTGGTGA+AGG | 0.488033 | 3_1:-64634915 | Msa0368240:CDS |
| AGCCATGCCGACCCAAAATA+CGG | 0.488337 | 3_1:+64636058 | None:intergenic |
| TAACAGGTAACTCTGTTGAT+AGG | 0.492879 | 3_1:+64634925 | None:intergenic |
| ACAACCACATACCAGTGAAC+AGG | 0.496412 | 3_1:-64638392 | Msa0368240:intron |
| GATAGGAAGAGGCTAATCTA+TGG | 0.498249 | 3_1:+64638554 | None:intergenic |
| TTGATCTTCCTTGAACCTTG+TGG | 0.502843 | 3_1:+64636351 | None:intergenic |
| TTCAGGGACGCAACATTACA+TGG | 0.511999 | 3_1:+64638592 | None:intergenic |
| TTATGGGCAGCTTCGATGGT+TGG | 0.513473 | 3_1:-64635154 | Msa0368240:CDS |
| AGCTTCGATGGTTGGAGCCA+AGG | 0.514016 | 3_1:-64635146 | Msa0368240:CDS |
| CAAGGTTCAAGGAAGATCAA+TGG | 0.519324 | 3_1:-64636348 | Msa0368240:CDS |
| TGTTGATGCGGCACAATCAA+AGG | 0.521558 | 3_1:-64636087 | Msa0368240:CDS |
| TTTGCATAGATTGTGTTCTA+CGG | 0.522039 | 3_1:+64638494 | None:intergenic |
| GAAGTAAAACCTCTTCATGA+TGG | 0.533100 | 3_1:-64638914 | Msa0368240:exon |
| AATTCTTAGTAGATGGTGAA+TGG | 0.533430 | 3_1:-64634950 | Msa0368240:CDS |
| ACAACATTGATGCTTAGGCC+TGG | 0.542952 | 3_1:-64635077 | Msa0368240:CDS |
| AGTAAGTGTTTGATAGGAAG+AGG | 0.544198 | 3_1:+64638543 | None:intergenic |
| TACTTATTTCCATCATGAAG+AGG | 0.545458 | 3_1:+64638905 | None:intergenic |
| CATTGATGCTTAGGCCTGGA+AGG | 0.548882 | 3_1:-64635073 | Msa0368240:intron |
| GTATATAAAGGAGGATGCAT+TGG | 0.549343 | 3_1:-64636588 | Msa0368240:CDS |
| AAATCGGTTCCTCAAAAGAC+AGG | 0.566049 | 3_1:-64637514 | Msa0368240:intron |
| GAGGTCACGTCTAGAATTCA+GGG | 0.572554 | 3_1:+64638576 | None:intergenic |
| TATACGGTATACCTGTTCAC+TGG | 0.574585 | 3_1:+64638381 | None:intergenic |
| AGGTGTCATCTAGAAGCTCA+GGG | 0.582260 | 3_1:-64638670 | Msa0368240:CDS |
| TTACTGCCGTGTATCGAAGA+AGG | 0.587416 | 3_1:-64638525 | Msa0368240:CDS |
| GCAAATAAAGGGTGTTGATG+CGG | 0.593221 | 3_1:-64636099 | Msa0368240:CDS |
| AGTATACAAGTTCATACTCA+AGG | 0.597184 | 3_1:-64635106 | Msa0368240:CDS |
| AACTTGTATACTCTGGTGAA+AGG | 0.608058 | 3_1:+64635117 | None:intergenic |
| AGTTACCTGTTACTGGTGAA+GGG | 0.611786 | 3_1:-64634914 | Msa0368240:CDS |
| TCTGCAGTTGTATATAAAGG+AGG | 0.612467 | 3_1:-64636597 | Msa0368240:intron |
| TGATGGAAATAAGTATTGCA+AGG | 0.623519 | 3_1:-64638897 | Msa0368240:intron |
| TATACCTGTTCACTGGTATG+TGG | 0.625731 | 3_1:+64638388 | None:intergenic |
| GAGTATGAACTTGTATACTC+TGG | 0.652624 | 3_1:+64635110 | None:intergenic |
| AAACGGCCTTCTTCGATACA+CGG | 0.653002 | 3_1:+64638519 | None:intergenic |
| GCTAAATCTGGTATTCCACA+AGG | 0.654809 | 3_1:-64636366 | Msa0368240:CDS |
| AGGAAGAGGCTAATCTATGG+AGG | 0.664945 | 3_1:+64638557 | None:intergenic |
| TGATGCGGCACAATCAAAGG+AGG | 0.679346 | 3_1:-64636084 | Msa0368240:CDS |
| GGTGTCATCTAGAAGCTCAG+GGG | 0.741151 | 3_1:-64638669 | Msa0368240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTATCAACTAATATA+GGG | - | chr3_1:64634873-64634892 | Msa0368240:exon | 10.0% |
| !!! | ATGAAGTATTTAAAAAAATA+AGG | - | chr3_1:64635944-64635963 | Msa0368240:intron | 10.0% |
| !! | GATTCTTTAATAATTTAAAT+AGG | - | chr3_1:64637942-64637961 | Msa0368240:intron | 10.0% |
| !!! | TTCATTATTAAACTTTTCTA+TGG | - | chr3_1:64634827-64634846 | Msa0368240:three_prime_UTR | 15.0% |
| !! | CTTTAATTATCAACTAATAT+AGG | - | chr3_1:64634872-64634891 | Msa0368240:exon | 15.0% |
| !! | TTTAAACTTAATACATGATA+CGG | - | chr3_1:64635696-64635715 | Msa0368240:intron | 15.0% |
| !! | AACTAAAATGTACATTAATT+AGG | + | chr3_1:64637090-64637109 | None:intergenic | 15.0% |
| !! | TCATTATTTATTCTAACTTT+CGG | - | chr3_1:64637303-64637322 | Msa0368240:intron | 15.0% |
| !! | TATTACATATATTCTAAACA+AGG | + | chr3_1:64637372-64637391 | None:intergenic | 15.0% |
| !!! | TTGAAAGTTTGAATTTTTTT+TGG | - | chr3_1:64637903-64637922 | Msa0368240:intron | 15.0% |
| !!! | TGAAAGTTTGAATTTTTTTT+GGG | - | chr3_1:64637904-64637923 | Msa0368240:intron | 15.0% |
| !!! | ATATATTTTTTTAGTTCACA+AGG | + | chr3_1:64638378-64638397 | None:intergenic | 15.0% |
| !!! | AAATAATTATCCCATTTTAT+CGG | + | chr3_1:64639387-64639406 | None:intergenic | 15.0% |
| !!! | TAAAATGGGATAATTATTTT+TGG | - | chr3_1:64639388-64639407 | Msa0368240:intron | 15.0% |
| !!! | AAAATGGGATAATTATTTTT+GGG | - | chr3_1:64639389-64639408 | Msa0368240:intron | 15.0% |
| !! | AACACTAAAAATTATTATGT+AGG | - | chr3_1:64641649-64641668 | Msa0368240:intron | 15.0% |
| !!! | CTATTTTTAATTCATTAAGA+AGG | + | chr3_1:64641866-64641885 | None:intergenic | 15.0% |
| !! | CGAATGAAATTAAAGAAAAA+AGG | + | chr3_1:64634782-64634801 | None:intergenic | 20.0% |
| !!! | TATTAAACTTTTCTATGGTA+TGG | - | chr3_1:64634832-64634851 | Msa0368240:three_prime_UTR | 20.0% |
| !!! | ATTAAACTTTTCTATGGTAT+GGG | - | chr3_1:64634833-64634852 | Msa0368240:three_prime_UTR | 20.0% |
| !! | TATTTATATCGTAGATAAGA+TGG | - | chr3_1:64635504-64635523 | Msa0368240:intron | 20.0% |
| !!! | TTTCATATCTCTCTTTTAAT+TGG | - | chr3_1:64636173-64636192 | Msa0368240:intron | 20.0% |
| !! | GACATATATAAAAGGATAAA+GGG | - | chr3_1:64636992-64637011 | Msa0368240:intron | 20.0% |
| !! | CAACTATCTTATAAAATAAC+AGG | + | chr3_1:64637223-64637242 | None:intergenic | 20.0% |
| !! | AATAATGACTTAAACATAAC+AGG | + | chr3_1:64637291-64637310 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTGGGTAAATTCT+TGG | - | chr3_1:64637915-64637934 | Msa0368240:intron | 20.0% |
| !! | AAATTGTATATAGCAGATAA+AGG | - | chr3_1:64639034-64639053 | Msa0368240:intron | 20.0% |
| !!! | TCAGTATTAATTTGAAATCT+AGG | - | chr3_1:64639173-64639192 | Msa0368240:intron | 20.0% |
| !!! | AATAATTATCCCATTTTATC+GGG | + | chr3_1:64639386-64639405 | None:intergenic | 20.0% |
| !! | TATTCACATTTCATTCAAAT+TGG | + | chr3_1:64639491-64639510 | None:intergenic | 20.0% |
| !! | AATTTGAATGAAATGTGAAT+AGG | - | chr3_1:64639490-64639509 | Msa0368240:intron | 20.0% |
| !! | ATTTCATAATAAAGTACAGT+TGG | + | chr3_1:64640417-64640436 | None:intergenic | 20.0% |
| !!! | ATAAAGATTACCATTTTTGT+CGG | + | chr3_1:64640820-64640839 | None:intergenic | 20.0% |
| !! | AAAAATGGTAATCTTTATGA+AGG | - | chr3_1:64640822-64640841 | Msa0368240:intron | 20.0% |
| !! | AAAATGGTAATCTTTATGAA+GGG | - | chr3_1:64640823-64640842 | Msa0368240:intron | 20.0% |
| !!! | AATGTGTACTTATTTTGTAA+CGG | + | chr3_1:64640956-64640975 | None:intergenic | 20.0% |
| !!! | TAAGTTATTTCTATACCAAA+AGG | - | chr3_1:64641093-64641112 | Msa0368240:intron | 20.0% |
| !! | AAACTTTGCAAAAGAATTTA+GGG | + | chr3_1:64641302-64641321 | None:intergenic | 20.0% |
| !! | AAAACTTTGCAAAAGAATTT+AGG | + | chr3_1:64641303-64641322 | None:intergenic | 20.0% |
| !! | AAAGTACTACTAATGCTTAA+TGG | - | chr3_1:64635300-64635319 | Msa0368240:intron | 25.0% |
| ! | ATATGAGTAAGATTAGGAAT+TGG | - | chr3_1:64635478-64635497 | Msa0368240:intron | 25.0% |
| ! | TATGAGTAAGATTAGGAATT+GGG | - | chr3_1:64635479-64635498 | Msa0368240:intron | 25.0% |
| ! | CTAAATCTCTCTTTACAATT+TGG | + | chr3_1:64635660-64635679 | None:intergenic | 25.0% |
| ! | AAGAGAGATTTAGAAGTAAA+TGG | - | chr3_1:64635667-64635686 | Msa0368240:intron | 25.0% |
| ! | TAATACATGATACGGATTTA+TGG | - | chr3_1:64635704-64635723 | Msa0368240:intron | 25.0% |
| !! | TTAGTTGTTGTTATTGTTTG+TGG | - | chr3_1:64635774-64635793 | Msa0368240:intron | 25.0% |
| ! | ATCTAACAGTAAACTCTAAA+AGG | + | chr3_1:64635920-64635939 | None:intergenic | 25.0% |
| !! | TTCTTTTATCTCACTCATAT+TGG | + | chr3_1:64635995-64636014 | None:intergenic | 25.0% |
| !! | TTTCTTCTTTTCATTATGTC+CGG | - | chr3_1:64636205-64636224 | Msa0368240:intron | 25.0% |
| ! | GGCTTACTCTATAAATAAAT+CGG | + | chr3_1:64636449-64636468 | None:intergenic | 25.0% |
| ! | AGAATTGGAAGGTAATTTAA+TGG | - | chr3_1:64636522-64636541 | Msa0368240:intron | 25.0% |
| ! | TAAATCTTGTCACATTTGTA+CGG | - | chr3_1:64636601-64636620 | Msa0368240:intron | 25.0% |
| ! | CTTCATGATTAGAAATGATT+AGG | + | chr3_1:64636914-64636933 | None:intergenic | 25.0% |
| ! | CTAATCATTTCTAATCATGA+AGG | - | chr3_1:64636912-64636931 | Msa0368240:intron | 25.0% |
| ! | GGACATATATAAAAGGATAA+AGG | - | chr3_1:64636991-64637010 | Msa0368240:intron | 25.0% |
| !!! | ACATTTTAGTTCAGTTTTGT+TGG | - | chr3_1:64637099-64637118 | Msa0368240:intron | 25.0% |
| ! | TTCAACAATGATACTCTTTA+AGG | - | chr3_1:64637127-64637146 | Msa0368240:intron | 25.0% |
| ! | TCAACAATGATACTCTTTAA+GGG | - | chr3_1:64637128-64637147 | Msa0368240:intron | 25.0% |
| ! | TTGTTGTAACTATCAATATC+TGG | - | chr3_1:64637329-64637348 | Msa0368240:intron | 25.0% |
| ! | TACATATATTCTAAACAAGG+TGG | + | chr3_1:64637369-64637388 | None:intergenic | 25.0% |
| ! | TTGAACATATTTGCTTGATT+AGG | - | chr3_1:64637663-64637682 | Msa0368240:intron | 25.0% |
| !!! | TCTAACATTTTGAGAACAAT+AGG | - | chr3_1:64637995-64638014 | Msa0368240:intron | 25.0% |
| !!! | CTGGTTGATTTTTCTTATTA+TGG | + | chr3_1:64638687-64638706 | None:intergenic | 25.0% |
| ! | AATAAGAAAAATCAACCAGA+AGG | - | chr3_1:64638688-64638707 | Msa0368240:intron | 25.0% |
| ! | CAAAAAATGTACTCAACTAA+GGG | + | chr3_1:64638756-64638775 | None:intergenic | 25.0% |
| !!! | CTTAGTTGAGTACATTTTTT+GGG | - | chr3_1:64638755-64638774 | Msa0368240:intron | 25.0% |
| ! | TGGCTCAGAATTTATAATAA+AGG | - | chr3_1:64638807-64638826 | Msa0368240:intron | 25.0% |
| ! | GGCTCAGAATTTATAATAAA+GGG | - | chr3_1:64638808-64638827 | Msa0368240:intron | 25.0% |
| ! | TACGTTGAGATTACTTTATT+AGG | - | chr3_1:64638894-64638913 | Msa0368240:intron | 25.0% |
| !!! | AGTTTTATTTTTCACAGCAA+TGG | - | chr3_1:64639199-64639218 | Msa0368240:intron | 25.0% |
| !!! | ATAGTGCTGGTAAATTTAAA+CGG | - | chr3_1:64639413-64639432 | Msa0368240:intron | 25.0% |
| !!! | GTAAATTTAAACGGATTAAC+AGG | - | chr3_1:64639422-64639441 | Msa0368240:intron | 25.0% |
| !! | TACCTTTTAATCTGTTAACA+AGG | + | chr3_1:64640328-64640347 | None:intergenic | 25.0% |
| ! | ACAATTGAATGAGCAAATAA+AGG | - | chr3_1:64640521-64640540 | Msa0368240:intron | 25.0% |
| ! | CAATTGAATGAGCAAATAAA+GGG | - | chr3_1:64640522-64640541 | Msa0368240:intron | 25.0% |
| !!! | TAAAGATTACCATTTTTGTC+GGG | + | chr3_1:64640819-64640838 | None:intergenic | 25.0% |
| !!! | TTTCATGGGATGAATTTTTT+TGG | + | chr3_1:64640908-64640927 | None:intergenic | 25.0% |
| !!! | TTTGACTTTACTTTACCTTT+TGG | + | chr3_1:64641111-64641130 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | chr3_1:64641185-64641204 | Msa0368240:intron | 25.0% |
| ! | AAATACTTGTGAGACTATTT+AGG | + | chr3_1:64641240-64641259 | None:intergenic | 25.0% |
| ! | AGTTATTTGAACTTATCAAC+TGG | + | chr3_1:64641266-64641285 | None:intergenic | 25.0% |
| ! | GAAATCAAATTCTTAGTAGA+TGG | - | chr3_1:64641675-64641694 | Msa0368240:intron | 25.0% |
| ! | AATCACAAATCTTCCTTATA+AGG | - | chr3_1:64641824-64641843 | Msa0368240:intron | 25.0% |
| ! | ATCACAAATCTTCCTTATAA+GGG | - | chr3_1:64641825-64641844 | Msa0368240:intron | 25.0% |
| !!! | TTCATTAAGAAGGCATTTTT+TGG | + | chr3_1:64641856-64641875 | None:intergenic | 25.0% |
| !!! | ATAACATTAGCTTTTGTGAG+TGG | + | chr3_1:64634702-64634721 | None:intergenic | 30.0% |
| GGGTCAATTAATATAGAGTT+TGG | + | chr3_1:64634900-64634919 | None:intergenic | 30.0% | |
| GCTGAAAAATCATGTATGTT+GGG | + | chr3_1:64634920-64634939 | None:intergenic | 30.0% | |
| TGCTGAAAAATCATGTATGT+TGG | + | chr3_1:64634921-64634940 | None:intergenic | 30.0% | |
| ATACATATCTCAAACCTCAA+GGG | + | chr3_1:64635014-64635033 | None:intergenic | 30.0% | |
| ! | TTTGAGATATGTATGGCATT+GGG | - | chr3_1:64635020-64635039 | Msa0368240:intron | 30.0% |
| !! | TCAATTTTGATAGGCTAGTT+TGG | - | chr3_1:64635144-64635163 | Msa0368240:CDS | 30.0% |
| !!! | GTTTTTTTTGTGAAAAGCAC+AGG | + | chr3_1:64635203-64635222 | None:intergenic | 30.0% |
| CAAAAAAAACATTGCTATGC+TGG | - | chr3_1:64635213-64635232 | Msa0368240:intron | 30.0% | |
| ! | GCTGGATAATTTTACTGAAT+TGG | - | chr3_1:64635231-64635250 | Msa0368240:intron | 30.0% |
| ! | ATGACATGGATGAATGTTTT+TGG | - | chr3_1:64635261-64635280 | Msa0368240:intron | 30.0% |
| ! | ACTTTTATTACCTAACCATG+AGG | - | chr3_1:64635325-64635344 | Msa0368240:intron | 30.0% |
| ! | CTTTTATTACCTAACCATGA+GGG | - | chr3_1:64635326-64635345 | Msa0368240:intron | 30.0% |
| GTAGATAAGATGGTATAAGT+AGG | + | chr3_1:64635457-64635476 | None:intergenic | 30.0% | |
| TACTCATATCGTAGATAAGA+TGG | + | chr3_1:64635467-64635486 | None:intergenic | 30.0% | |
| TCTACGATATGAGTAAGATT+AGG | - | chr3_1:64635472-64635491 | Msa0368240:intron | 30.0% | |
| ! | TTAAGTGGTTTGTCAATTTG+TGG | - | chr3_1:64635539-64635558 | Msa0368240:intron | 30.0% |
| CACATTCTACCTTTAAGTAT+CGG | + | chr3_1:64635619-64635638 | None:intergenic | 30.0% | |
| CAACTAATTCTTATCTCACT+AGG | + | chr3_1:64635761-64635780 | None:intergenic | 30.0% | |
| TGAGATTATGTATAAGGTAG+AGG | - | chr3_1:64635826-64635845 | Msa0368240:intron | 30.0% | |
| TTGTCAATATAGCTTCATGA+TGG | - | chr3_1:64635869-64635888 | Msa0368240:intron | 30.0% | |
| TTAGAGTTTACTGTTAGATC+AGG | - | chr3_1:64635921-64635940 | Msa0368240:intron | 30.0% | |
| ! | CATGTTTTTCTTTCTTTCTC+TGG | + | chr3_1:64636147-64636166 | None:intergenic | 30.0% |
| CTAAATTAGCCCATTCAAAT+TGG | + | chr3_1:64636372-64636391 | None:intergenic | 30.0% | |
| AATAAATCGGTCATCTTTGT+TGG | + | chr3_1:64636436-64636455 | None:intergenic | 30.0% | |
| ! | GAATTAGCCTATACTAGAAT+TGG | - | chr3_1:64636507-64636526 | Msa0368240:intron | 30.0% |
| TTACCTTCCAATTCTAGTAT+AGG | + | chr3_1:64636517-64636536 | None:intergenic | 30.0% | |
| ! | TGGAAGGTAATTTAATGGAT+AGG | - | chr3_1:64636527-64636546 | Msa0368240:intron | 30.0% |
| TGTCCAGTTTAATGGTTATA+GGG | + | chr3_1:64636743-64636762 | None:intergenic | 30.0% | |
| ATGTCCAGTTTAATGGTTAT+AGG | + | chr3_1:64636744-64636763 | None:intergenic | 30.0% | |
| TAATAGATTATCTTCACGCA+TGG | - | chr3_1:64636859-64636878 | Msa0368240:intron | 30.0% | |
| TCTAATCATGAAGGAATATC+CGG | - | chr3_1:64636921-64636940 | Msa0368240:intron | 30.0% | |
| TTATATATGTCCCTTTCCTA+GGG | + | chr3_1:64636983-64637002 | None:intergenic | 30.0% | |
| TTTATATATGTCCCTTTCCT+AGG | + | chr3_1:64636984-64637003 | None:intergenic | 30.0% | |
| AGGAAAGGGACATATATAAA+AGG | - | chr3_1:64636984-64637003 | Msa0368240:intron | 30.0% | |
| CAACAATGATACTCTTTAAG+GGG | - | chr3_1:64637129-64637148 | Msa0368240:intron | 30.0% | |
| ACTACACAAGAAGTAACTTA+AGG | - | chr3_1:64637187-64637206 | Msa0368240:intron | 30.0% | |
| AAGAAGTAACTTAAGGAACA+TGG | - | chr3_1:64637194-64637213 | Msa0368240:intron | 30.0% | |
| ! | AAAGTGTCATCCTTACAATT+TGG | - | chr3_1:64637256-64637275 | Msa0368240:intron | 30.0% |
| !!! | GTTTTAGCTTCCAAATTGTA+AGG | + | chr3_1:64637269-64637288 | None:intergenic | 30.0% |
| ! | TAAAGTTTTTGTCATGTGAC+TGG | - | chr3_1:64637445-64637464 | Msa0368240:intron | 30.0% |
| GAGGATAACTGACTAAAAAA+GGG | + | chr3_1:64637600-64637619 | None:intergenic | 30.0% | |
| TGAGGATAACTGACTAAAAA+AGG | + | chr3_1:64637601-64637620 | None:intergenic | 30.0% | |
| ! | TATCCTCAGTTCTTACATTT+TGG | - | chr3_1:64637613-64637632 | Msa0368240:intron | 30.0% |
| TACTTATTTCCATCATGAAG+AGG | + | chr3_1:64637730-64637749 | None:intergenic | 30.0% | |
| ! | TGATGGAAATAAGTATTGCA+AGG | - | chr3_1:64637735-64637754 | Msa0368240:intron | 30.0% |
| !! | ACATTTTGAGAACAATAGGA+AGG | - | chr3_1:64637999-64638018 | Msa0368240:intron | 30.0% |
| !! | CATTTTGAGAACAATAGGAA+GGG | - | chr3_1:64638000-64638019 | Msa0368240:intron | 30.0% |
| TTTGCATAGATTGTGTTCTA+CGG | + | chr3_1:64638141-64638160 | None:intergenic | 30.0% | |
| ! | CGAGTAAATGTAAAGGTATA+CGG | + | chr3_1:64638270-64638289 | None:intergenic | 30.0% |
| GGAAAATCGAGTAAATGTAA+AGG | + | chr3_1:64638277-64638296 | None:intergenic | 30.0% | |
| CCAAATAGAGAAAAATAGCA+TGG | + | chr3_1:64638303-64638322 | None:intergenic | 30.0% | |
| !!! | CCATGCTATTTTTCTCTATT+TGG | - | chr3_1:64638300-64638319 | Msa0368240:intron | 30.0% |
| TTCTCTATTTGGTAAACTGA+TGG | - | chr3_1:64638311-64638330 | Msa0368240:intron | 30.0% | |
| AAACAATTCCCATCTAACAA+AGG | + | chr3_1:64638487-64638506 | None:intergenic | 30.0% | |
| TTGTATTAAACCCATTAACC+AGG | - | chr3_1:64638573-64638592 | Msa0368240:CDS | 30.0% | |
| !!! | GTAAAAAGGTGTTCTTGTTT+TGG | + | chr3_1:64638731-64638750 | None:intergenic | 30.0% |
| CCAAAAAATGTACTCAACTA+AGG | + | chr3_1:64638757-64638776 | None:intergenic | 30.0% | |
| !!! | CCTTAGTTGAGTACATTTTT+TGG | - | chr3_1:64638754-64638773 | Msa0368240:intron | 30.0% |
| !!! | AGTACATTTTTTGGGCAAAT+GGG | - | chr3_1:64638763-64638782 | Msa0368240:intron | 30.0% |
| AAGTTGCATACACTCAAAAA+AGG | + | chr3_1:64638981-64639000 | None:intergenic | 30.0% | |
| AATTAAAGATACTAGCCCAT+TGG | - | chr3_1:64639312-64639331 | Msa0368240:intron | 30.0% | |
| ATTGTCAAAATCCAACCAAT+GGG | + | chr3_1:64639330-64639349 | None:intergenic | 30.0% | |
| TAAGTATGATCCCGATAAAA+TGG | - | chr3_1:64639373-64639392 | Msa0368240:intron | 30.0% | |
| AAGTATGATCCCGATAAAAT+GGG | - | chr3_1:64639374-64639393 | Msa0368240:intron | 30.0% | |
| TGAATAGGATCAAGTTCTAT+TGG | - | chr3_1:64639505-64639524 | Msa0368240:intron | 30.0% | |
| GATGGTTAAATATCAGATCT+AGG | + | chr3_1:64639552-64639571 | None:intergenic | 30.0% | |
| ATTGACTAAACCAACTACTT+TGG | + | chr3_1:64639672-64639691 | None:intergenic | 30.0% | |
| ! | GTTTTCTTACCTCCATTATA+TGG | + | chr3_1:64639861-64639880 | None:intergenic | 30.0% |
| TGAAGAATATCAAACCACTA+AGG | + | chr3_1:64639905-64639924 | None:intergenic | 30.0% | |
| CATGCTGAAACATTTAATAG+CGG | - | chr3_1:64639962-64639981 | Msa0368240:intron | 30.0% | |
| AAAGAGGTAAGTTTATGATG+CGG | + | chr3_1:64640012-64640031 | None:intergenic | 30.0% | |
| TTCTCTGCAGTTGTATATAA+AGG | - | chr3_1:64640032-64640051 | Msa0368240:intron | 30.0% | |
| AAATAGCCTCAAAATTGAGA+AGG | + | chr3_1:64640131-64640150 | None:intergenic | 30.0% | |
| TAGTATCAAACGAAGAAATG+CGG | + | chr3_1:64640164-64640183 | None:intergenic | 30.0% | |
| GTGCTATAATGTTATCTCTT+TGG | - | chr3_1:64640210-64640229 | Msa0368240:intron | 30.0% | |
| CTATAATGTTATCTCTTTGG+AGG | - | chr3_1:64640213-64640232 | Msa0368240:intron | 30.0% | |
| CACCTTGTTAACAGATTAAA+AGG | - | chr3_1:64640323-64640342 | Msa0368240:intron | 30.0% | |
| !! | ATAGAAGTGGTGGATATATT+GGG | + | chr3_1:64640371-64640390 | None:intergenic | 30.0% |
| !! | TATAGAAGTGGTGGATATAT+TGG | + | chr3_1:64640372-64640391 | None:intergenic | 30.0% |
| ATATATCCACCACTTCTATA+TGG | - | chr3_1:64640372-64640391 | Msa0368240:intron | 30.0% | |
| ACTTCCAAATATCGAGAATA+TGG | - | chr3_1:64640622-64640641 | Msa0368240:intron | 30.0% | |
| CTTCCAAATATCGAGAATAT+GGG | - | chr3_1:64640623-64640642 | Msa0368240:intron | 30.0% | |
| !! | AAAGATTACCATTTTTGTCG+GGG | + | chr3_1:64640818-64640837 | None:intergenic | 30.0% |
| CGATGAAATCAAATTTGTAC+AGG | + | chr3_1:64640981-64641000 | None:intergenic | 30.0% | |
| TTCAATTGTTCATCAGAACA+TGG | + | chr3_1:64641043-64641062 | None:intergenic | 30.0% | |
| ! | TTTGCAAAAGAATTTAGGGT+TGG | + | chr3_1:64641298-64641317 | None:intergenic | 30.0% |
| AGTATACAAGTTCATACTCA+AGG | - | chr3_1:64641526-64641545 | Msa0368240:intron | 30.0% | |
| TGATAAAAATTGTACCTTCC+AGG | + | chr3_1:64641576-64641595 | None:intergenic | 30.0% | |
| TTGAGTTAGAAGAAAACTTC+AGG | + | chr3_1:64641630-64641649 | None:intergenic | 30.0% | |
| AATTCTTAGTAGATGGTGAA+TGG | - | chr3_1:64641682-64641701 | Msa0368240:intron | 30.0% | |
| ! | ACTTTTCTATGGTATGGGTA+TGG | - | chr3_1:64634838-64634857 | Msa0368240:three_prime_UTR | 35.0% |
| CATACATATCTCAAACCTCA+AGG | + | chr3_1:64635015-64635034 | None:intergenic | 35.0% | |
| ! | CTTGAGGTTTGAGATATGTA+TGG | - | chr3_1:64635013-64635032 | Msa0368240:intron | 35.0% |
| ! | GTTTGAGATATGTATGGCAT+TGG | - | chr3_1:64635019-64635038 | Msa0368240:intron | 35.0% |
| ! | ATTTTGTGTGTTAACCCACT+TGG | - | chr3_1:64635046-64635065 | Msa0368240:intron | 35.0% |
| ACCTAGGTTTACTTTCTTGT+TGG | + | chr3_1:64635375-64635394 | None:intergenic | 35.0% | |
| ACAAGAAAGTAAACCTAGGT+TGG | - | chr3_1:64635375-64635394 | Msa0368240:intron | 35.0% | |
| CAAGAAAGTAAACCTAGGTT+GGG | - | chr3_1:64635376-64635395 | Msa0368240:intron | 35.0% | |
| ! | CTGTTTTGTATGGTTGAGTT+AGG | + | chr3_1:64635407-64635426 | None:intergenic | 35.0% |
| CTAACTCAACCATACAAAAC+AGG | - | chr3_1:64635405-64635424 | Msa0368240:intron | 35.0% | |
| ! | GATTCACATAAGTACTGTGA+AGG | - | chr3_1:64635566-64635585 | Msa0368240:intron | 35.0% |
| TACTGTGAAGGTTGGAAAAT+TGG | - | chr3_1:64635578-64635597 | Msa0368240:intron | 35.0% | |
| CATGATAGTCCGATACTTAA+AGG | - | chr3_1:64635607-64635626 | Msa0368240:intron | 35.0% | |
| AATTCTTATCTCACTAGGCA+GGG | + | chr3_1:64635756-64635775 | None:intergenic | 35.0% | |
| TAATTCTTATCTCACTAGGC+AGG | + | chr3_1:64635757-64635776 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTATTGTTTGTGG+TGG | - | chr3_1:64635777-64635796 | Msa0368240:intron | 35.0% |
| GCTGGTTGAGATTATGTATA+AGG | - | chr3_1:64635820-64635839 | Msa0368240:intron | 35.0% | |
| GACAAAATTTCCTCCATTGA+AGG | + | chr3_1:64635854-64635873 | None:intergenic | 35.0% | |
| ATACTCACAAGGACGATTTA+TGG | + | chr3_1:64636019-64636038 | None:intergenic | 35.0% | |
| TTCCCTACTTATTCACCTTA+AGG | - | chr3_1:64636092-64636111 | Msa0368240:CDS | 35.0% | |
| TCCCTACTTATTCACCTTAA+GGG | - | chr3_1:64636093-64636112 | Msa0368240:CDS | 35.0% | |
| ACCCTTAAGGTGAATAAGTA+GGG | + | chr3_1:64636097-64636116 | None:intergenic | 35.0% | |
| AACCCTTAAGGTGAATAAGT+AGG | + | chr3_1:64636098-64636117 | None:intergenic | 35.0% | |
| GATTCACACATAAACTGACA+TGG | + | chr3_1:64636470-64636489 | None:intergenic | 35.0% | |
| TCAGTTTATGTGTGAATCAC+TGG | - | chr3_1:64636472-64636491 | Msa0368240:intron | 35.0% | |
| TAGCCTATACTAGAATTGGA+AGG | - | chr3_1:64636511-64636530 | Msa0368240:intron | 35.0% | |
| GATTTATCCTCATCATCAAG+TGG | + | chr3_1:64636587-64636606 | None:intergenic | 35.0% | |
| AAAAACACCCTGACATAGAA+CGG | - | chr3_1:64636684-64636703 | Msa0368240:intron | 35.0% | |
| AGTTTAATGGTTATAGGGAG+TGG | + | chr3_1:64636738-64636757 | None:intergenic | 35.0% | |
| ACTCCCTATAACCATTAAAC+TGG | - | chr3_1:64636737-64636756 | Msa0368240:intron | 35.0% | |
| AACCATTAAACTGGACATGA+AGG | - | chr3_1:64636746-64636765 | Msa0368240:intron | 35.0% | |
| ACCATTAAACTGGACATGAA+GGG | - | chr3_1:64636747-64636766 | Msa0368240:intron | 35.0% | |
| ! | TTTTGGCCTAACCCTAATTT+GGG | + | chr3_1:64636960-64636979 | None:intergenic | 35.0% |
| GAGAGAAAGTAGACTTTACA+CGG | - | chr3_1:64637021-64637040 | Msa0368240:intron | 35.0% | |
| ACAAGGTGGTTGAAATTTAC+TGG | + | chr3_1:64637355-64637374 | None:intergenic | 35.0% | |
| ! | AACTTAGGATAACTGACTCA+CGG | + | chr3_1:64637401-64637420 | None:intergenic | 35.0% |
| ! | AGTCAGTTATCCTAAGTTGA+GGG | - | chr3_1:64637403-64637422 | Msa0368240:intron | 35.0% |
| AAACTTTACCAATTGCACCA+AGG | + | chr3_1:64637433-64637452 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTAAAAATCA+GGG | - | chr3_1:64637495-64637514 | Msa0368240:intron | 35.0% | |
| ! | TACCCTGATTTTTACACAAG+AGG | + | chr3_1:64637500-64637519 | None:intergenic | 35.0% |
| CTTGTGTAAAAATCAGGGTA+AGG | - | chr3_1:64637500-64637519 | Msa0368240:intron | 35.0% | |
| CAACCAAAATGTAAGAACTG+AGG | + | chr3_1:64637619-64637638 | None:intergenic | 35.0% | |
| ATTTGCTTGATTAGGAGCTA+AGG | - | chr3_1:64637671-64637690 | Msa0368240:intron | 35.0% | |
| ! | CTTTTTCTCTTCTCTTTGAC+AGG | - | chr3_1:64637696-64637715 | Msa0368240:intron | 35.0% |
| GAAGTAAAACCTCTTCATGA+TGG | - | chr3_1:64637718-64637737 | Msa0368240:intron | 35.0% | |
| AGTAAGTGTTTGATAGGAAG+AGG | + | chr3_1:64638092-64638111 | None:intergenic | 35.0% | |
| GATTGTGTTCTACGGAAAAA+CGG | + | chr3_1:64638133-64638152 | None:intergenic | 35.0% | |
| AGAACACAATCTATGCAAAC+TGG | - | chr3_1:64638142-64638161 | Msa0368240:intron | 35.0% | |
| !! | AGATGGATTAGGATTATCTC+TGG | + | chr3_1:64638194-64638213 | None:intergenic | 35.0% |
| ! | TCTGAGTCTATAGATGGATT+AGG | + | chr3_1:64638205-64638224 | None:intergenic | 35.0% |
| TAGAGAAAAATAGCATGGCT+AGG | + | chr3_1:64638298-64638317 | None:intergenic | 35.0% | |
| GTAGAGAAAGAAGAAAAGCA+GGG | + | chr3_1:64638425-64638444 | None:intergenic | 35.0% | |
| AGTAGAGAAAGAAGAAAAGC+AGG | + | chr3_1:64638426-64638445 | None:intergenic | 35.0% | |
| TTCTTTCTCTACTTCTGTCT+AGG | - | chr3_1:64638433-64638452 | Msa0368240:CDS | 35.0% | |
| ATTCAGTCTCCTTTGTTAGA+TGG | - | chr3_1:64638475-64638494 | Msa0368240:CDS | 35.0% | |
| TTCAGTCTCCTTTGTTAGAT+GGG | - | chr3_1:64638476-64638495 | Msa0368240:CDS | 35.0% | |
| CCTCAAAGACAACAAATATG+TGG | + | chr3_1:64638517-64638536 | None:intergenic | 35.0% | |
| !! | CCACATATTTGTTGTCTTTG+AGG | - | chr3_1:64638514-64638533 | Msa0368240:CDS | 35.0% |
| AACTAATAGGCCTGGTTAAT+GGG | + | chr3_1:64638586-64638605 | None:intergenic | 35.0% | |
| TAACTAATAGGCCTGGTTAA+TGG | + | chr3_1:64638587-64638606 | None:intergenic | 35.0% | |
| CTAGACGAACTCTAACTAAT+AGG | + | chr3_1:64638599-64638618 | None:intergenic | 35.0% | |
| GAAAAATCAACCAGAAGGAA+TGG | - | chr3_1:64638693-64638712 | Msa0368240:intron | 35.0% | |
| CTCAACTAAGGGAAGTAAAA+AGG | + | chr3_1:64638745-64638764 | None:intergenic | 35.0% | |
| !!! | GAGTACATTTTTTGGGCAAA+TGG | - | chr3_1:64638762-64638781 | Msa0368240:intron | 35.0% |
| !!! | GTACATTTTTTGGGCAAATG+GGG | - | chr3_1:64638764-64638783 | Msa0368240:intron | 35.0% |
| TCTATATCCTGTAAGCTATG+AGG | - | chr3_1:64638845-64638864 | Msa0368240:intron | 35.0% | |
| ! | TTTAGAACCTCATAGCTTAC+AGG | + | chr3_1:64638855-64638874 | None:intergenic | 35.0% |
| !! | TTTTGAGGAACCGATTTTGT+TGG | + | chr3_1:64639115-64639134 | None:intergenic | 35.0% |
| ATACTGATGCAAAAGATCTC+AGG | + | chr3_1:64639160-64639179 | None:intergenic | 35.0% | |
| !! | CACAGCAATGGTTTTTGTTT+TGG | - | chr3_1:64639211-64639230 | Msa0368240:intron | 35.0% |
| CGATTCAACTGTGATCATTT+AGG | + | chr3_1:64639252-64639271 | None:intergenic | 35.0% | |
| CATTGTCAAAATCCAACCAA+TGG | + | chr3_1:64639331-64639350 | None:intergenic | 35.0% | |
| !! | TGGATTTTGACAATGCAATC+TGG | - | chr3_1:64639336-64639355 | Msa0368240:intron | 35.0% |
| !!! | ATTATTTTTGGGCATAGTGC+TGG | - | chr3_1:64639400-64639419 | Msa0368240:intron | 35.0% |
| ! | GGATTAGCAATCAACAACTA+TGG | + | chr3_1:64639531-64639550 | None:intergenic | 35.0% |
| TTAACCATCCACAAATTTCG+AGG | - | chr3_1:64639563-64639582 | Msa0368240:intron | 35.0% | |
| TCTCACTTTGGCTAGATATA+TGG | - | chr3_1:64639646-64639665 | Msa0368240:intron | 35.0% | |
| AGATATATGGCCAAAGTAGT+TGG | - | chr3_1:64639659-64639678 | Msa0368240:intron | 35.0% | |
| ! | TATGAAGTCCGTTGATAGAA+AGG | - | chr3_1:64639770-64639789 | Msa0368240:intron | 35.0% |
| CTAGAGTAGCTTCCATATAA+TGG | - | chr3_1:64639846-64639865 | Msa0368240:intron | 35.0% | |
| AATGGAGGTAAGAAAACTTC+TGG | - | chr3_1:64639864-64639883 | Msa0368240:intron | 35.0% | |
| ATACAACTGCAGAGAAAAAG+AGG | + | chr3_1:64640028-64640047 | None:intergenic | 35.0% | |
| TCTGCAGTTGTATATAAAGG+AGG | - | chr3_1:64640035-64640054 | Msa0368240:intron | 35.0% | |
| GTATATAAAGGAGGATGCAT+TGG | - | chr3_1:64640044-64640063 | Msa0368240:intron | 35.0% | |
| ! | TTGCTACCTTCTCAATTTTG+AGG | - | chr3_1:64640122-64640141 | Msa0368240:intron | 35.0% |
| AGTATCAAACGAAGAAATGC+GGG | + | chr3_1:64640163-64640182 | None:intergenic | 35.0% | |
| GCAGAAGAAATAGCTAAATC+TGG | - | chr3_1:64640254-64640273 | Msa0368240:intron | 35.0% | |
| !! | TAGAAGTGGTGGATATATTG+GGG | + | chr3_1:64640370-64640389 | None:intergenic | 35.0% |
| ACATGCAAACCATATAGAAG+TGG | + | chr3_1:64640384-64640403 | None:intergenic | 35.0% | |
| ! | ATGGTTTGCATGTGTACTTA+TGG | - | chr3_1:64640391-64640410 | Msa0368240:intron | 35.0% |
| CATCAGTAAGGATACAAAAG+GGG | + | chr3_1:64640465-64640484 | None:intergenic | 35.0% | |
| GCATCAGTAAGGATACAAAA+GGG | + | chr3_1:64640466-64640485 | None:intergenic | 35.0% | |
| TGCATCAGTAAGGATACAAA+AGG | + | chr3_1:64640467-64640486 | None:intergenic | 35.0% | |
| ACAATGAAGTTGCATCAGTA+AGG | + | chr3_1:64640477-64640496 | None:intergenic | 35.0% | |
| ! | AAAGGAGGTTTCCGTATTTT+GGG | - | chr3_1:64640563-64640582 | Msa0368240:intron | 35.0% |
| CAACCCATATTCTCGATATT+TGG | + | chr3_1:64640629-64640648 | None:intergenic | 35.0% | |
| CAAATATCGAGAATATGGGT+TGG | - | chr3_1:64640627-64640646 | Msa0368240:intron | 35.0% | |
| AGGGAACATACAAGTATCTT+TGG | - | chr3_1:64640842-64640861 | Msa0368240:intron | 35.0% | |
| TTGATTTCATCGCTAAGCAT+TGG | - | chr3_1:64640989-64641008 | Msa0368240:intron | 35.0% | |
| !! | AGCATTGGCTTCTAATGTAT+AGG | - | chr3_1:64641004-64641023 | Msa0368240:intron | 35.0% |
| ! | TTAAGCTTCTGAGAAGCTTA+TGG | - | chr3_1:64641161-64641180 | Msa0368240:intron | 35.0% |
| AACTTGTATACTCTGGTGAA+AGG | + | chr3_1:64641518-64641537 | None:intergenic | 35.0% | |
| GAGTATGAACTTGTATACTC+TGG | + | chr3_1:64641525-64641544 | None:intergenic | 35.0% | |
| TCTCAACAACATTGATGCTT+AGG | - | chr3_1:64641550-64641569 | Msa0368240:intron | 35.0% | |
| TAACAGGTAACTCTGTTGAT+AGG | + | chr3_1:64641710-64641729 | None:intergenic | 35.0% | |
| !! | TTTTTGGCACAACCCTTATA+AGG | + | chr3_1:64641840-64641859 | None:intergenic | 35.0% |
| GTGCGATGCAAAAACTTACT+AGG | + | chr3_1:64634760-64634779 | None:intergenic | 40.0% | |
| !!! | CTCTCGGTGTCAATTTTGAT+AGG | - | chr3_1:64635135-64635154 | Msa0368240:CDS | 40.0% |
| GAATTGGAGTGTAGATGACA+TGG | - | chr3_1:64635247-64635266 | Msa0368240:intron | 40.0% | |
| TCATTCAATCCCTCATGGTT+AGG | + | chr3_1:64635338-64635357 | None:intergenic | 40.0% | |
| AACCATGAGGGATTGAATGA+TGG | - | chr3_1:64635338-64635357 | Msa0368240:intron | 40.0% | |
| ACCATGAGGGATTGAATGAT+GGG | - | chr3_1:64635339-64635358 | Msa0368240:intron | 40.0% | |
| GCCAACAAGAAAGTAAACCT+AGG | - | chr3_1:64635371-64635390 | Msa0368240:intron | 40.0% | |
| ! | AAAGTAAACCTAGGTTGGGT+TGG | - | chr3_1:64635380-64635399 | Msa0368240:intron | 40.0% |
| ! | AAGTAAACCTAGGTTGGGTT+GGG | - | chr3_1:64635381-64635400 | Msa0368240:intron | 40.0% |
| ! | CCTTACAAGCCTGTTTTGTA+TGG | + | chr3_1:64635417-64635436 | None:intergenic | 40.0% |
| CCATACAAAACAGGCTTGTA+AGG | - | chr3_1:64635414-64635433 | Msa0368240:intron | 40.0% | |
| CAAAACAGGCTTGTAAGGTA+AGG | - | chr3_1:64635419-64635438 | Msa0368240:intron | 40.0% | |
| ! | CACATAAGTACTGTGAAGGT+TGG | - | chr3_1:64635570-64635589 | Msa0368240:intron | 40.0% |
| TGTGAAGGTTGGAAAATTGG+AGG | - | chr3_1:64635581-64635600 | Msa0368240:intron | 40.0% | |
| CTTAAAGGTAGAATGTGAGC+AGG | - | chr3_1:64635622-64635641 | Msa0368240:intron | 40.0% | |
| TAAGGTAGAGGTTCCTTCAA+TGG | - | chr3_1:64635838-64635857 | Msa0368240:intron | 40.0% | |
| CCAACTGAGTTATACTCACA+AGG | + | chr3_1:64636030-64636049 | None:intergenic | 40.0% | |
| CCTTGTGAGTATAACTCAGT+TGG | - | chr3_1:64636027-64636046 | Msa0368240:intron | 40.0% | |
| GTGAGTATAACTCAGTTGGT+AGG | - | chr3_1:64636031-64636050 | Msa0368240:intron | 40.0% | |
| GTAGGACATTGCAATATGCA+GGG | - | chr3_1:64636049-64636068 | Msa0368240:intron | 40.0% | |
| TAGGACATTGCAATATGCAG+GGG | - | chr3_1:64636050-64636069 | Msa0368240:intron | 40.0% | |
| CACCTTAAGGGTTGAAATTC+TGG | - | chr3_1:64636105-64636124 | Msa0368240:CDS | 40.0% | |
| ATACCACTCGAACTATCAAC+CGG | + | chr3_1:64636227-64636246 | None:intergenic | 40.0% | |
| GTGAATCACTGGATCTTGTT+TGG | - | chr3_1:64636483-64636502 | Msa0368240:intron | 40.0% | |
| !! | AATTGAGCCACTTGATGATG+AGG | - | chr3_1:64636577-64636596 | Msa0368240:CDS | 40.0% |
| AATGAGCTCAAAACTGTAGG+AGG | - | chr3_1:64636646-64636665 | Msa0368240:intron | 40.0% | |
| AAAACACCCTGACATAGAAC+GGG | - | chr3_1:64636685-64636704 | Msa0368240:intron | 40.0% | |
| GGGTGAGTAAGCATATACTT+GGG | - | chr3_1:64636705-64636724 | Msa0368240:intron | 40.0% | |
| GGTGAGTAAGCATATACTTG+GGG | - | chr3_1:64636706-64636725 | Msa0368240:intron | 40.0% | |
| CCATTAAACTGGACATGAAG+GGG | - | chr3_1:64636748-64636767 | Msa0368240:intron | 40.0% | |
| CATTAAACTGGACATGAAGG+GGG | - | chr3_1:64636749-64636768 | Msa0368240:intron | 40.0% | |
| ATTAAACTGGACATGAAGGG+GGG | - | chr3_1:64636750-64636769 | Msa0368240:intron | 40.0% | |
| TACAAGCAATCCCAGAATTG+TGG | + | chr3_1:64636798-64636817 | None:intergenic | 40.0% | |
| CTTGTAGACAAGTCACTACT+CGG | - | chr3_1:64636812-64636831 | Msa0368240:intron | 40.0% | |
| ATGATTAGGTGCAGTACGAA+TGG | + | chr3_1:64636900-64636919 | None:intergenic | 40.0% | |
| AATCATGAAGGAATATCCGG+TGG | - | chr3_1:64636924-64636943 | Msa0368240:intron | 40.0% | |
| ATCATGAAGGAATATCCGGT+GGG | - | chr3_1:64636925-64636944 | Msa0368240:intron | 40.0% | |
| !! | CTAACCCTAATTTGGGTTGA+AGG | + | chr3_1:64636953-64636972 | None:intergenic | 40.0% |
| CTTCAACCCAAATTAGGGTT+AGG | - | chr3_1:64636951-64636970 | Msa0368240:intron | 40.0% | |
| !! | GTTTTGGCCTAACCCTAATT+TGG | + | chr3_1:64636961-64636980 | None:intergenic | 40.0% |
| ! | ACTCTTTAAGGGGACACAAA+TGG | - | chr3_1:64637139-64637158 | Msa0368240:intron | 40.0% |
| GAGTCAGTTATCCTAAGTTG+AGG | - | chr3_1:64637402-64637421 | Msa0368240:intron | 40.0% | |
| ! | GTCAGTTATCCTAAGTTGAG+GGG | - | chr3_1:64637404-64637423 | Msa0368240:intron | 40.0% |
| ! | GTTTTTGTCATGTGACTGGA+AGG | - | chr3_1:64637449-64637468 | Msa0368240:intron | 40.0% |
| CAGCCTCTTGTGTAAAAATC+AGG | - | chr3_1:64637494-64637513 | Msa0368240:intron | 40.0% | |
| ACAGTGCACGTAAACATTGA+AGG | - | chr3_1:64637879-64637898 | Msa0368240:intron | 40.0% | |
| GATAGGAAGAGGCTAATCTA+TGG | + | chr3_1:64638081-64638100 | None:intergenic | 40.0% | |
| TCGTCTTCTGAGTCTATAGA+TGG | + | chr3_1:64638211-64638230 | None:intergenic | 40.0% | |
| TATACCTGTTCACTGGTATG+TGG | + | chr3_1:64638247-64638266 | None:intergenic | 40.0% | |
| TATACGGTATACCTGTTCAC+TGG | + | chr3_1:64638254-64638273 | None:intergenic | 40.0% | |
| AGAAGAAAAGCAGGGAAGAA+CGG | + | chr3_1:64638417-64638436 | None:intergenic | 40.0% | |
| !!! | GGTGTTCTTGTTTTGGAACT+TGG | + | chr3_1:64638724-64638743 | None:intergenic | 40.0% |
| AAGAGAGCTTCTTGAATCTG+TGG | - | chr3_1:64638787-64638806 | Msa0368240:intron | 40.0% | |
| GTGAAGCCAACCAACAAAAT+CGG | - | chr3_1:64639102-64639121 | Msa0368240:intron | 40.0% | |
| ! | AAATCGGTTCCTCAAAAGAC+AGG | - | chr3_1:64639118-64639137 | Msa0368240:intron | 40.0% |
| TCACAGTTGAATCGCAATCT+TGG | - | chr3_1:64639258-64639277 | Msa0368240:intron | 40.0% | |
| AAAGATACTAGCCCATTGGT+TGG | - | chr3_1:64639316-64639335 | Msa0368240:intron | 40.0% | |
| TTTGCAGACCTCGAAATTTG+TGG | + | chr3_1:64639574-64639593 | None:intergenic | 40.0% | |
| AAGGCAAAAGCTAGCTCAAA+GGG | + | chr3_1:64639700-64639719 | None:intergenic | 40.0% | |
| AAAGGCAAAAGCTAGCTCAA+AGG | + | chr3_1:64639701-64639720 | None:intergenic | 40.0% | |
| !!! | TTGAGCTAGCTTTTGCCTTT+TGG | - | chr3_1:64639701-64639720 | Msa0368240:intron | 40.0% |
| ! | AGTCCGTTGATAGAAAGGAT+TGG | - | chr3_1:64639775-64639794 | Msa0368240:intron | 40.0% |
| GCACCAATCCTTTCTATCAA+CGG | + | chr3_1:64639781-64639800 | None:intergenic | 40.0% | |
| GAGTAGCTTCCATATAATGG+AGG | - | chr3_1:64639849-64639868 | Msa0368240:intron | 40.0% | |
| GAGGTAAGAAAACTTCTGGA+CGG | - | chr3_1:64639868-64639887 | Msa0368240:intron | 40.0% | |
| AAGAAAACTTCTGGACGGAT+TGG | - | chr3_1:64639873-64639892 | Msa0368240:intron | 40.0% | |
| ! | AGAAAACTTCTGGACGGATT+GGG | - | chr3_1:64639874-64639893 | Msa0368240:intron | 40.0% |
| ! | AATGTTATCTCTTTGGAGGC+AGG | - | chr3_1:64640217-64640236 | Msa0368240:intron | 40.0% |
| !! | AGCTATTTCTTCTGCTAGTC+TGG | + | chr3_1:64640249-64640268 | None:intergenic | 40.0% |
| GCTAAATCTGGTATTCCACA+AGG | - | chr3_1:64640266-64640285 | Msa0368240:intron | 40.0% | |
| TTGATCTTCCTTGAACCTTG+TGG | + | chr3_1:64640284-64640303 | None:intergenic | 40.0% | |
| CAAGGTTCAAGGAAGATCAA+TGG | - | chr3_1:64640284-64640303 | Msa0368240:intron | 40.0% | |
| TGCAAACCATATAGAAGTGG+TGG | + | chr3_1:64640381-64640400 | None:intergenic | 40.0% | |
| !! | GCAAATAAAGGGTGTTGATG+CGG | - | chr3_1:64640533-64640552 | Msa0368240:intron | 40.0% |
| ! | CAAAGGAGGTTTCCGTATTT+TGG | - | chr3_1:64640562-64640581 | Msa0368240:intron | 40.0% |
| AAGGATGTCAGGTGTTTCAT+GGG | + | chr3_1:64640922-64640941 | None:intergenic | 40.0% | |
| !! | ACAGTTGATGAGAAAGTCGA+CGG | - | chr3_1:64641362-64641381 | Msa0368240:intron | 40.0% |
| TCAACAGAGTTACCTGTTAC+TGG | - | chr3_1:64641711-64641730 | Msa0368240:intron | 40.0% | |
| AGTTACCTGTTACTGGTGAA+GGG | - | chr3_1:64641718-64641737 | Msa0368240:intron | 40.0% | |
| ! | GGTCTCGGATTCGAATTTTC+AGG | + | chr3_1:64634944-64634963 | None:intergenic | 45.0% |
| GTGTGCTCATCTATAGGTCT+CGG | + | chr3_1:64634959-64634978 | None:intergenic | 45.0% | |
| ACCTATAGATGAGCACACTC+CGG | - | chr3_1:64634961-64634980 | Msa0368240:CDS | 45.0% | |
| GTGTGTTAACCCACTTGGAT+TGG | - | chr3_1:64635051-64635070 | Msa0368240:intron | 45.0% | |
| ACCCATCATTCAATCCCTCA+TGG | + | chr3_1:64635343-64635362 | None:intergenic | 45.0% | |
| ! | ATGAGGGATTGAATGATGGG+TGG | - | chr3_1:64635342-64635361 | Msa0368240:intron | 45.0% |
| GGCTTGTAAGGTAAGGTGAA+TGG | - | chr3_1:64635426-64635445 | Msa0368240:intron | 45.0% | |
| TGGTAGAGTCGTGTCTTAAG+TGG | - | chr3_1:64635524-64635543 | Msa0368240:intron | 45.0% | |
| ! | GTTATTGTTTGTGGTGGTGC+TGG | - | chr3_1:64635783-64635802 | Msa0368240:intron | 45.0% |
| CTGGTGAATTGGTTGATTGC+TGG | - | chr3_1:64635802-64635821 | Msa0368240:intron | 45.0% | |
| GGTAGGACATTGCAATATGC+AGG | - | chr3_1:64636048-64636067 | Msa0368240:intron | 45.0% | |
| ACATTGCAATATGCAGGGGT+CGG | - | chr3_1:64636054-64636073 | Msa0368240:intron | 45.0% | |
| GTGAATAAGTAGGGAACCCT+GGG | + | chr3_1:64636088-64636107 | None:intergenic | 45.0% | |
| GGCCAGAATTTCAACCCTTA+AGG | + | chr3_1:64636110-64636129 | None:intergenic | 45.0% | |
| GGGTTGAAATTCTGGCCATT+AGG | - | chr3_1:64636113-64636132 | Msa0368240:CDS | 45.0% | |
| ATGCTTCATGCTAACCCACT+TGG | - | chr3_1:64636270-64636289 | Msa0368240:intron | 45.0% | |
| TGCTTCATGCTAACCCACTT+GGG | - | chr3_1:64636271-64636290 | Msa0368240:intron | 45.0% | |
| GTCACTTGTTCGATTCTCTC+CGG | - | chr3_1:64636344-64636363 | Msa0368240:CDS | 45.0% | |
| ! | TCTCCGGTGCCAATTTGAAT+GGG | - | chr3_1:64636360-64636379 | Msa0368240:CDS | 45.0% |
| TAGCCCATTCAAATTGGCAC+CGG | + | chr3_1:64636366-64636385 | None:intergenic | 45.0% | |
| GGTACCAAGTATTTGACCTG+CGG | - | chr3_1:64636622-64636641 | Msa0368240:intron | 45.0% | |
| GTACCAAGTATTTGACCTGC+GGG | - | chr3_1:64636623-64636642 | Msa0368240:intron | 45.0% | |
| ATTCCCGCAGGTCAAATACT+TGG | + | chr3_1:64636629-64636648 | None:intergenic | 45.0% | |
| GGGAATGAGCTCAAAACTGT+AGG | - | chr3_1:64636643-64636662 | Msa0368240:intron | 45.0% | |
| TACTCACCCGTTCTATGTCA+GGG | + | chr3_1:64636694-64636713 | None:intergenic | 45.0% | |
| TTACTCACCCGTTCTATGTC+AGG | + | chr3_1:64636695-64636714 | None:intergenic | 45.0% | |
| CGGGTGAGTAAGCATATACT+TGG | - | chr3_1:64636704-64636723 | Msa0368240:intron | 45.0% | |
| CCCCTTCATGTCCAGTTTAA+TGG | + | chr3_1:64636751-64636770 | None:intergenic | 45.0% | |
| AGCAATCCCAGAATTGTGGA+TGG | + | chr3_1:64636794-64636813 | None:intergenic | 45.0% | |
| TCATGAAGGAATATCCGGTG+GGG | - | chr3_1:64636926-64636945 | Msa0368240:intron | 45.0% | |
| GGGACCTTCAACCCAAATTA+GGG | - | chr3_1:64636946-64636965 | Msa0368240:intron | 45.0% | |
| TTAGGCCAAAACCCTAGGAA+AGG | - | chr3_1:64636969-64636988 | Msa0368240:intron | 45.0% | |
| TAGGCCAAAACCCTAGGAAA+GGG | - | chr3_1:64636970-64636989 | Msa0368240:intron | 45.0% | |
| ! | ATGTCCCTTTCCTAGGGTTT+TGG | + | chr3_1:64636977-64636996 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr3_1:64637489-64637508 | None:intergenic | 45.0% |
| CGCACAATACACCAAATGGT+GGG | - | chr3_1:64637526-64637545 | Msa0368240:CDS | 45.0% | |
| CTAAAGCTCCTGCATATGCA+GGG | + | chr3_1:64637565-64637584 | None:intergenic | 45.0% | |
| ACTAAAGCTCCTGCATATGC+AGG | + | chr3_1:64637566-64637585 | None:intergenic | 45.0% | |
| CTGACTAAAAAAGGGCAACC+CGG | + | chr3_1:64637592-64637611 | None:intergenic | 45.0% | |
| ! | TAGGTGTCATCTAGAAGCTC+AGG | - | chr3_1:64637961-64637980 | Msa0368240:intron | 45.0% |
| ! | AGGTGTCATCTAGAAGCTCA+GGG | - | chr3_1:64637962-64637981 | Msa0368240:intron | 45.0% |
| TTCAGGGACGCAACATTACA+TGG | + | chr3_1:64638043-64638062 | None:intergenic | 45.0% | |
| ! | GAGGTCACGTCTAGAATTCA+GGG | + | chr3_1:64638059-64638078 | None:intergenic | 45.0% |
| AGGAAGAGGCTAATCTATGG+AGG | + | chr3_1:64638078-64638097 | None:intergenic | 45.0% | |
| CACGGCAGTAAGTGTTTGAT+AGG | + | chr3_1:64638098-64638117 | None:intergenic | 45.0% | |
| TTACTGCCGTGTATCGAAGA+AGG | - | chr3_1:64638107-64638126 | Msa0368240:intron | 45.0% | |
| AAACGGCCTTCTTCGATACA+CGG | + | chr3_1:64638116-64638135 | None:intergenic | 45.0% | |
| ACAACCACATACCAGTGAAC+AGG | - | chr3_1:64638240-64638259 | Msa0368240:intron | 45.0% | |
| CGAACTCTAACTAATAGGCC+TGG | + | chr3_1:64638594-64638613 | None:intergenic | 45.0% | |
| CTTGGCTAAACCATTCCTTC+TGG | + | chr3_1:64638706-64638725 | None:intergenic | 45.0% | |
| !! | GAGGAACCGATTTTGTTGGT+TGG | + | chr3_1:64639111-64639130 | None:intergenic | 45.0% |
| ! | ACACACACACCTGTCTTTTG+AGG | + | chr3_1:64639130-64639149 | None:intergenic | 45.0% |
| ACAGGAAAACGTCATACGAG+TGG | - | chr3_1:64639440-64639459 | Msa0368240:intron | 45.0% | |
| CAGACCTCGAAATTTGTGGA+TGG | + | chr3_1:64639570-64639589 | None:intergenic | 45.0% | |
| CTTAAGGCTTGACATCTGCA+GGG | + | chr3_1:64639602-64639621 | None:intergenic | 45.0% | |
| !!! | TTGCCTTTTGGTGTTGAGAG+TGG | - | chr3_1:64639713-64639732 | Msa0368240:intron | 45.0% |
| !!! | TGCCTTTTGGTGTTGAGAGT+GGG | - | chr3_1:64639714-64639733 | Msa0368240:intron | 45.0% |
| !! | GATAGAAAGGATTGGTGCTG+AGG | - | chr3_1:64639783-64639802 | Msa0368240:intron | 45.0% |
| ! | GCTGTCACGGTGATAGTTTT+AGG | + | chr3_1:64639827-64639846 | None:intergenic | 45.0% |
| TGTCTTAGAGCTCGAAGTTC+AGG | - | chr3_1:64640089-64640108 | Msa0368240:intron | 45.0% | |
| CTGGTATTCCACAAGGTTCA+AGG | - | chr3_1:64640273-64640292 | Msa0368240:intron | 45.0% | |
| TTGTTCGTGTACAGCTACGA+AGG | + | chr3_1:64640505-64640524 | None:intergenic | 45.0% | |
| TGTTGATGCGGCACAATCAA+AGG | - | chr3_1:64640545-64640564 | Msa0368240:intron | 45.0% | |
| !! | GAGGTTTCCGTATTTTGGGT+CGG | - | chr3_1:64640567-64640586 | Msa0368240:intron | 45.0% |
| ! | TGGGTTGGAACATTGTGTCA+TGG | - | chr3_1:64640642-64640661 | Msa0368240:intron | 45.0% |
| GGGTTGGAACATTGTGTCAT+GGG | - | chr3_1:64640643-64640662 | Msa0368240:intron | 45.0% | |
| !! | TACCATTTTTGTCGGGGTGA+AGG | + | chr3_1:64640812-64640831 | None:intergenic | 45.0% |
| CAAGGATGTCAGGTGTTTCA+TGG | + | chr3_1:64640923-64640942 | None:intergenic | 45.0% | |
| TTAACGCAAGCAAGGATGTC+AGG | + | chr3_1:64640933-64640952 | None:intergenic | 45.0% | |
| TGTAACGGTTAACGCAAGCA+AGG | + | chr3_1:64640941-64640960 | None:intergenic | 45.0% | |
| CATCAGAGTGCGCAAGTTAT+GGG | - | chr3_1:64641462-64641481 | Msa0368240:intron | 45.0% | |
| ACAACATTGATGCTTAGGCC+TGG | - | chr3_1:64641555-64641574 | Msa0368240:intron | 45.0% | |
| GAGTTACCTGTTACTGGTGA+AGG | - | chr3_1:64641717-64641736 | Msa0368240:intron | 45.0% | |
| GTTAACCCTTCACCAGTAAC+AGG | + | chr3_1:64641726-64641745 | None:intergenic | 45.0% | |
| !!! | TGATTTTTTATTATTTTTTT+TGG | - | chr3_1:64638936-64638955 | Msa0368240:intron | 5.0% |
| TCCGGAGTGTGCTCATCTAT+AGG | + | chr3_1:64634965-64634984 | None:intergenic | 50.0% | |
| TTCGCGTAGGCTTTCAACTC+CGG | + | chr3_1:64634983-64635002 | None:intergenic | 50.0% | |
| ! | AAGGGTTTGCTTGTTCGCGT+AGG | + | chr3_1:64634996-64635015 | None:intergenic | 50.0% |
| GGTCTCAGGTTCGATTCTCT+CGG | - | chr3_1:64635119-64635138 | Msa0368240:CDS | 50.0% | |
| !! | TTGTGGTGGTGCTGGTGAAT+TGG | - | chr3_1:64635791-64635810 | Msa0368240:intron | 50.0% |
| GGTAGAGGTTCCTTCAATGG+AGG | - | chr3_1:64635841-64635860 | Msa0368240:intron | 50.0% | |
| CATTGCAATATGCAGGGGTC+GGG | - | chr3_1:64636055-64636074 | Msa0368240:CDS | 50.0% | |
| ATTGCAATATGCAGGGGTCG+GGG | - | chr3_1:64636056-64636075 | Msa0368240:CDS | 50.0% | |
| GGTGAATAAGTAGGGAACCC+TGG | + | chr3_1:64636089-64636108 | None:intergenic | 50.0% | |
| TCTCTGGTCACGTAGCCTAA+TGG | + | chr3_1:64636131-64636150 | None:intergenic | 50.0% | |
| !! | TGTCCGGTTGATAGTTCGAG+TGG | - | chr3_1:64636221-64636240 | Msa0368240:intron | 50.0% |
| TCATGCTAACCCACTTGGGT+TGG | - | chr3_1:64636275-64636294 | Msa0368240:intron | 50.0% | |
| !! | TGGGTTGGCCTAGTGGTAAT+TGG | - | chr3_1:64636290-64636309 | Msa0368240:intron | 50.0% |
| TGGCCTAGTGGTAATTGGCT+TGG | - | chr3_1:64636295-64636314 | Msa0368240:intron | 50.0% | |
| ! | GGCCTAGTGGTAATTGGCTT+GGG | - | chr3_1:64636296-64636315 | Msa0368240:intron | 50.0% |
| GTCCCAAGCCAATTACCACT+AGG | + | chr3_1:64636301-64636320 | None:intergenic | 50.0% | |
| !! | TGGTAATTGGCTTGGGACCT+GGG | - | chr3_1:64636303-64636322 | Msa0368240:intron | 50.0% |
| GAATCGAACAAGTGACCTCG+AGG | + | chr3_1:64636340-64636359 | None:intergenic | 50.0% | |
| ! | CTCTCCGGTGCCAATTTGAA+TGG | - | chr3_1:64636359-64636378 | Msa0368240:CDS | 50.0% |
| !!! | AGTTTTGAGCTCATTCCCGC+AGG | + | chr3_1:64636641-64636660 | None:intergenic | 50.0% |
| GAGCTCAAAACTGTAGGAGG+AGG | - | chr3_1:64636649-64636668 | Msa0368240:intron | 50.0% | |
| AGAGCGACCATCCACAATTC+TGG | - | chr3_1:64636784-64636803 | Msa0368240:intron | 50.0% | |
| GAGCGACCATCCACAATTCT+GGG | - | chr3_1:64636785-64636804 | Msa0368240:intron | 50.0% | |
| ACTACTCGGTCATGCGAGAT+AGG | - | chr3_1:64636826-64636845 | Msa0368240:intron | 50.0% | |
| CTACTCGGTCATGCGAGATA+GGG | - | chr3_1:64636827-64636846 | Msa0368240:intron | 50.0% | |
| CATGCGAGATAGGGAGCTAT+CGG | - | chr3_1:64636836-64636855 | Msa0368240:intron | 50.0% | |
| GGGGACCTTCAACCCAAATT+AGG | - | chr3_1:64636945-64636964 | Msa0368240:intron | 50.0% | |
| TAGGGTTAGGCCAAAACCCT+AGG | - | chr3_1:64636964-64636983 | Msa0368240:intron | 50.0% | |
| TTACACGGAGACAGTGACCT+AGG | - | chr3_1:64637036-64637055 | Msa0368240:intron | 50.0% | |
| TCGTCTGAAAACACGAGCCT+AGG | + | chr3_1:64637056-64637075 | None:intergenic | 50.0% | |
| CCAAGGTTACCCCTCAACTT+AGG | + | chr3_1:64637416-64637435 | None:intergenic | 50.0% | |
| ! | CCTAAGTTGAGGGGTAACCT+TGG | - | chr3_1:64637413-64637432 | Msa0368240:intron | 50.0% |
| ! | AGGGGTAACCTTGGTGCAAT+TGG | - | chr3_1:64637422-64637441 | Msa0368240:intron | 50.0% |
| TCATGTGACTGGAAGGTCAC+AGG | - | chr3_1:64637456-64637475 | Msa0368240:intron | 50.0% | |
| AAGGTCACAGGTTCAAGTCC+TGG | - | chr3_1:64637468-64637487 | Msa0368240:intron | 50.0% | |
| GCTGCGCACAATACACCAAA+TGG | - | chr3_1:64637522-64637541 | Msa0368240:CDS | 50.0% | |
| GCGCACAATACACCAAATGG+TGG | - | chr3_1:64637525-64637544 | Msa0368240:CDS | 50.0% | |
| ! | ATGCAGGAGCTTTAGTGCAC+CGG | - | chr3_1:64637570-64637589 | Msa0368240:CDS | 50.0% |
| ! | GGTGTCATCTAGAAGCTCAG+GGG | - | chr3_1:64637963-64637982 | Msa0368240:intron | 50.0% |
| ! | GGAGGTCACGTCTAGAATTC+AGG | + | chr3_1:64638060-64638079 | None:intergenic | 50.0% |
| CGTCATACGAGTGGATAGCT+TGG | - | chr3_1:64639449-64639468 | Msa0368240:intron | 50.0% | |
| GCTTAAGGCTTGACATCTGC+AGG | + | chr3_1:64639603-64639622 | None:intergenic | 50.0% | |
| TCAAGCCTTAAGCACGAGAG+AGG | - | chr3_1:64639610-64639629 | Msa0368240:intron | 50.0% | |
| GCCTGTTCGAACTCTCACTT+TGG | - | chr3_1:64639634-64639653 | Msa0368240:intron | 50.0% | |
| GCCAAAGTGAGAGTTCGAAC+AGG | + | chr3_1:64639638-64639657 | None:intergenic | 50.0% | |
| AGCCCACTCTCAACACCAAA+AGG | + | chr3_1:64639719-64639738 | None:intergenic | 50.0% | |
| GGAAGCTACTCTAGCTGTCA+CGG | + | chr3_1:64639840-64639859 | None:intergenic | 50.0% | |
| ! | ATCTCTTTGGAGGCAGGCTT+TGG | - | chr3_1:64640223-64640242 | Msa0368240:intron | 50.0% |
| TGATGCGGCACAATCAAAGG+AGG | - | chr3_1:64640548-64640567 | Msa0368240:intron | 50.0% | |
| !! | TTCCGTATTTTGGGTCGGCA+TGG | - | chr3_1:64640572-64640591 | Msa0368240:intron | 50.0% |
| AGCCATGCCGACCCAAAATA+CGG | + | chr3_1:64640577-64640596 | None:intergenic | 50.0% | |
| ! | ATTTTTGTCGGGGTGAAGGC+GGG | + | chr3_1:64640808-64640827 | None:intergenic | 50.0% |
| ! | CATTTTTGTCGGGGTGAAGG+CGG | + | chr3_1:64640809-64640828 | None:intergenic | 50.0% |
| ! | CCATAACTTGCGCACTCTGA+TGG | + | chr3_1:64641464-64641483 | None:intergenic | 50.0% |
| CCATCAGAGTGCGCAAGTTA+TGG | - | chr3_1:64641461-64641480 | Msa0368240:intron | 50.0% | |
| CAAGTTATGGGCAGCTTCGA+TGG | - | chr3_1:64641474-64641493 | Msa0368240:intron | 50.0% | |
| TTATGGGCAGCTTCGATGGT+TGG | - | chr3_1:64641478-64641497 | Msa0368240:intron | 50.0% | |
| CATTGATGCTTAGGCCTGGA+AGG | - | chr3_1:64641559-64641578 | Msa0368240:intron | 50.0% | |
| CGCGAACAAGCAAACCCTTG+AGG | - | chr3_1:64634997-64635016 | Msa0368240:intron | 55.0% | |
| !! | GCGTAACTGGCGTTGGCTTT+GGG | - | chr3_1:64635081-64635100 | Msa0368240:CDS | 55.0% |
| ! | TTTGGGACCTTGGAGTGTGC+TGG | - | chr3_1:64635098-64635117 | Msa0368240:CDS | 55.0% |
| AGTTAGGCCCAACCCAACCT+AGG | + | chr3_1:64635391-64635410 | None:intergenic | 55.0% | |
| ACCACTAGGCCAACCCAAGT+GGG | + | chr3_1:64636287-64636306 | None:intergenic | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | + | chr3_1:64636288-64636307 | None:intergenic | 55.0% | |
| !! | GTGGTAATTGGCTTGGGACC+TGG | - | chr3_1:64636302-64636321 | Msa0368240:intron | 55.0% |
| TCGAACAAGTGACCTCGAGG+AGG | + | chr3_1:64636337-64636356 | None:intergenic | 55.0% | |
| !! | TTTGGGTTGAAGGTCCCCAC+CGG | + | chr3_1:64636943-64636962 | None:intergenic | 55.0% |
| ! | CAAATGGTGGGACCCCTTTC+CGG | - | chr3_1:64637538-64637557 | Msa0368240:CDS | 55.0% |
| CATATGCAGGGTCCGGAAAG+GGG | + | chr3_1:64637553-64637572 | None:intergenic | 55.0% | |
| GCATATGCAGGGTCCGGAAA+GGG | + | chr3_1:64637554-64637573 | None:intergenic | 55.0% | |
| TGCATATGCAGGGTCCGGAA+AGG | + | chr3_1:64637555-64637574 | None:intergenic | 55.0% | |
| TTTCCGGACCCTGCATATGC+AGG | - | chr3_1:64637554-64637573 | Msa0368240:CDS | 55.0% | |
| ! | TGCAGGAGCTTTAGTGCACC+GGG | - | chr3_1:64637571-64637590 | Msa0368240:CDS | 55.0% |
| AGGCACCTCTCTCGTGCTTA+AGG | + | chr3_1:64639618-64639637 | None:intergenic | 55.0% | |
| ! | CGGATTGGGAACAGCCTTAG+TGG | - | chr3_1:64639888-64639907 | Msa0368240:intron | 55.0% |
| !! | ATTTTGGGTCGGCATGGCTG+AGG | - | chr3_1:64640578-64640597 | Msa0368240:intron | 55.0% |
| CGCCTTCACCCCGACAAAAA+TGG | - | chr3_1:64640807-64640826 | Msa0368240:intron | 55.0% | |
| AGCTTCGATGGTTGGAGCCA+AGG | - | chr3_1:64641486-64641505 | Msa0368240:intron | 55.0% | |
| !! | CTGGTGAAAGGTGCTCTCCT+TGG | + | chr3_1:64641506-64641525 | None:intergenic | 55.0% |
| !! | ACCCACTTGGATTGGCCCGA+TGG | - | chr3_1:64635059-64635078 | Msa0368240:intron | 60.0% |
| GCCATCGGGCCAATCCAAGT+GGG | + | chr3_1:64635063-64635082 | None:intergenic | 60.0% | |
| ! | GATTGGCCCGATGGCGTAAC+TGG | - | chr3_1:64635068-64635087 | Msa0368240:intron | 60.0% |
| CCAACGCCAGTTACGCCATC+GGG | + | chr3_1:64635077-64635096 | None:intergenic | 60.0% | |
| GCCAACGCCAGTTACGCCAT+CGG | + | chr3_1:64635078-64635097 | None:intergenic | 60.0% | |
| !! | GGCGTAACTGGCGTTGGCTT+TGG | - | chr3_1:64635080-64635099 | Msa0368240:CDS | 60.0% |
| !! | TGGCGTTGGCTTTGGGACCT+TGG | - | chr3_1:64635088-64635107 | Msa0368240:CDS | 60.0% |
| CCTGAGACCAGCACACTCCA+AGG | + | chr3_1:64635108-64635127 | None:intergenic | 60.0% | |
| ! | CCTTGGAGTGTGCTGGTCTC+AGG | - | chr3_1:64635105-64635124 | Msa0368240:CDS | 60.0% |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | - | chr3_1:64636283-64636302 | Msa0368240:intron | 60.0% |
| ! | TCGAGGAGGAGCACATTCCC+AGG | + | chr3_1:64636323-64636342 | None:intergenic | 60.0% |
| TGGGAATGTGCTCCTCCTCG+AGG | - | chr3_1:64636322-64636341 | Msa0368240:CDS | 60.0% | |
| CGGAAAGGGGTCCCACCATT+TGG | + | chr3_1:64637540-64637559 | None:intergenic | 60.0% | |
| GCTCCTGCATATGCAGGGTC+CGG | + | chr3_1:64637560-64637579 | None:intergenic | 60.0% | |
| CGCCATCGGGCCAATCCAAG+TGG | + | chr3_1:64635064-64635083 | None:intergenic | 65.0% | |
| CCCGATGGCGTAACTGGCGT+TGG | - | chr3_1:64635074-64635093 | Msa0368240:CDS | 65.0% | |
| AGGGGTCGGGGTTCGAACCC+AGG | - | chr3_1:64636068-64636087 | Msa0368240:CDS | 70.0% | |
| GGGGTCGGGGTTCGAACCCA+GGG | - | chr3_1:64636069-64636088 | Msa0368240:CDS | 70.0% | |
| GTCGGGGTGAAGGCGGGAGA+AGG | + | chr3_1:64640802-64640821 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 64634692 | 64641962 | 64634692 | ID=Msa0368240;Name=Msa0368240 |
| chr3_1 | mRNA | 64634692 | 64641962 | 64634692 | ID=Msa0368240-mRNA-1;Parent=Msa0368240;Name=Msa0368240-mRNA-1;_AED=0.27;_eAED=0.27;_QI=85|1|1|1|0.87|1|9|189|296 |
| chr3_1 | exon | 64634692 | 64634983 | 64634692 | ID=Msa0368240-mRNA-1:exon:12891;Parent=Msa0368240-mRNA-1 |
| chr3_1 | exon | 64635074 | 64635186 | 64635074 | ID=Msa0368240-mRNA-1:exon:12890;Parent=Msa0368240-mRNA-1 |
| chr3_1 | exon | 64636055 | 64636143 | 64636055 | ID=Msa0368240-mRNA-1:exon:12889;Parent=Msa0368240-mRNA-1 |
| chr3_1 | exon | 64636310 | 64636415 | 64636310 | ID=Msa0368240-mRNA-1:exon:12888;Parent=Msa0368240-mRNA-1 |
| chr3_1 | exon | 64636544 | 64636612 | 64636544 | ID=Msa0368240-mRNA-1:exon:12887;Parent=Msa0368240-mRNA-1 |
| chr3_1 | exon | 64637515 | 64637604 | 64637515 | ID=Msa0368240-mRNA-1:exon:12886;Parent=Msa0368240-mRNA-1 |
| chr3_1 | exon | 64638393 | 64638690 | 64638393 | ID=Msa0368240-mRNA-1:exon:12885;Parent=Msa0368240-mRNA-1 |
| chr3_1 | exon | 64638898 | 64638936 | 64638898 | ID=Msa0368240-mRNA-1:exon:12884;Parent=Msa0368240-mRNA-1 |
| chr3_1 | exon | 64641894 | 64641962 | 64641894 | ID=Msa0368240-mRNA-1:exon:12883;Parent=Msa0368240-mRNA-1 |
| chr3_1 | five_prime_UTR | 64641894 | 64641962 | 64641894 | ID=Msa0368240-mRNA-1:five_prime_utr;Parent=Msa0368240-mRNA-1 |
| chr3_1 | five_prime_UTR | 64638921 | 64638936 | 64638921 | ID=Msa0368240-mRNA-1:five_prime_utr;Parent=Msa0368240-mRNA-1 |
| chr3_1 | CDS | 64638898 | 64638920 | 64638898 | ID=Msa0368240-mRNA-1:cds;Parent=Msa0368240-mRNA-1 |
| chr3_1 | CDS | 64638393 | 64638690 | 64638393 | ID=Msa0368240-mRNA-1:cds;Parent=Msa0368240-mRNA-1 |
| chr3_1 | CDS | 64637515 | 64637604 | 64637515 | ID=Msa0368240-mRNA-1:cds;Parent=Msa0368240-mRNA-1 |
| chr3_1 | CDS | 64636544 | 64636612 | 64636544 | ID=Msa0368240-mRNA-1:cds;Parent=Msa0368240-mRNA-1 |
| chr3_1 | CDS | 64636310 | 64636415 | 64636310 | ID=Msa0368240-mRNA-1:cds;Parent=Msa0368240-mRNA-1 |
| chr3_1 | CDS | 64636055 | 64636143 | 64636055 | ID=Msa0368240-mRNA-1:cds;Parent=Msa0368240-mRNA-1 |
| chr3_1 | CDS | 64635074 | 64635186 | 64635074 | ID=Msa0368240-mRNA-1:cds;Parent=Msa0368240-mRNA-1 |
| chr3_1 | CDS | 64634881 | 64634983 | 64634881 | ID=Msa0368240-mRNA-1:cds;Parent=Msa0368240-mRNA-1 |
| chr3_1 | three_prime_UTR | 64634692 | 64634880 | 64634692 | ID=Msa0368240-mRNA-1:three_prime_utr;Parent=Msa0368240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
