AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0373700


Find 336 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr3_1 gene 72793285 72801141 72793285 ID=Msa0373700;Name=Msa0373700
chr3_1 mRNA 72793285 72801141 72793285 ID=Msa0373700-mRNA-1;Parent=Msa0373700;Name=Msa0373700-mRNA-1;_AED=0.05;_eAED=0.05;_QI=233|1|0.88|1|0.87|0.77|9|425|1822
chr3_1 exon 72793285 72793616 72793285 ID=Msa0373700-mRNA-1:exon:16426;Parent=Msa0373700-mRNA-1
chr3_1 exon 72793706 72793996 72793706 ID=Msa0373700-mRNA-1:exon:16427;Parent=Msa0373700-mRNA-1
chr3_1 exon 72794092 72797373 72794092 ID=Msa0373700-mRNA-1:exon:16428;Parent=Msa0373700-mRNA-1
chr3_1 exon 72797679 72798501 72797679 ID=Msa0373700-mRNA-1:exon:16429;Parent=Msa0373700-mRNA-1
chr3_1 exon 72798609 72799249 72798609 ID=Msa0373700-mRNA-1:exon:16430;Parent=Msa0373700-mRNA-1
chr3_1 exon 72799667 72799814 72799667 ID=Msa0373700-mRNA-1:exon:16431;Parent=Msa0373700-mRNA-1
chr3_1 exon 72799890 72799971 72799890 ID=Msa0373700-mRNA-1:exon:16432;Parent=Msa0373700-mRNA-1
chr3_1 exon 72800563 72800811 72800563 ID=Msa0373700-mRNA-1:exon:16433;Parent=Msa0373700-mRNA-1
chr3_1 exon 72800863 72801141 72800863 ID=Msa0373700-mRNA-1:exon:16434;Parent=Msa0373700-mRNA-1
chr3_1 five_prime_UTR 72793285 72793517 72793285 ID=Msa0373700-mRNA-1:five_prime_utr;Parent=Msa0373700-mRNA-1
chr3_1 CDS 72793518 72793616 72793518 ID=Msa0373700-mRNA-1:cds;Parent=Msa0373700-mRNA-1
chr3_1 CDS 72793706 72793996 72793706 ID=Msa0373700-mRNA-1:cds;Parent=Msa0373700-mRNA-1
chr3_1 CDS 72794092 72797373 72794092 ID=Msa0373700-mRNA-1:cds;Parent=Msa0373700-mRNA-1
chr3_1 CDS 72797679 72798501 72797679 ID=Msa0373700-mRNA-1:cds;Parent=Msa0373700-mRNA-1
chr3_1 CDS 72798609 72799249 72798609 ID=Msa0373700-mRNA-1:cds;Parent=Msa0373700-mRNA-1
chr3_1 CDS 72799667 72799814 72799667 ID=Msa0373700-mRNA-1:cds;Parent=Msa0373700-mRNA-1
chr3_1 CDS 72799890 72799971 72799890 ID=Msa0373700-mRNA-1:cds;Parent=Msa0373700-mRNA-1
chr3_1 CDS 72800563 72800665 72800563 ID=Msa0373700-mRNA-1:cds;Parent=Msa0373700-mRNA-1
chr3_1 three_prime_UTR 72800666 72800811 72800666 ID=Msa0373700-mRNA-1:three_prime_utr;Parent=Msa0373700-mRNA-1
chr3_1 three_prime_UTR 72800863 72801141 72800863 ID=Msa0373700-mRNA-1:three_prime_utr;Parent=Msa0373700-mRNA-1
Gene Sequence

>Msa0373700

ATGTCTGAGAATAATCACTTATCGGAGCGGATTTTGGATTCGGATTCTCAATCAAATGGGGTTAATACCGAATCAAACATTGATACTTATCAAAATCAGGTAACACATGTTGATCTCAAAGATGAAGTTTTGGGAGAATCTGAAGATGTAAAATCTACAGAGGATAACATGTTTGTTGATTGCCCCGACGAGCTAATCACGTTCGACGGTAAGCAAAAGGAAGAAGAAGCTGTAGCTGCTGATGAAAATGAAGAGGAAAGTCAAATTATGCATCAACAACAGAGTCATTTTGGTGAATTGAACAATGGCGTAGCGGGGGAGCTGGAACAGTTGCGGGTGAAGTTGGAGAATGCTGTTGCTGAGAAAGAAAGTGTTGTGAATGAATATCAGGAGCTTTTATCTGTGAGGGATCGCGAGATAGAGAATCTAAATGCAAAGGTTTCACAATTAATGATATCCAATGAGATCCTGCAAGCTTCATCCGAGGCCCAACATGAAAAGGATGGTGATATTGACAATGTGATAGATAGGACGATATCCTCTCTTGCAAGTGTTGTTAATCAAGGGCAAGTATTGGACGAGTCTAGAAGTGGGAAAATAGTATATATCGAGGAAAGCACTGCATTCTTGATTGAAAAGTATAATCAAATGCTTTCGGATATTTATCAAGTTGGACAGTCATTCTCTGAGGTTGGCTTGGATACAAATGAGCAGGAATTTGGAAACATACTTGTTGGTGCTCGTGGTGGGTTGCTGGAGCTCAAGAGAAAGGAAGATGATTTGATTGAAAAGCTGTCTCATGTAGAAGGCGAAAATCAGAAATTGGTAGAAGAGCTTGACAAGGAAAGGGCGGTGATAGAGACATTGAATACTGAGCTTGGAAATATAAAAGTAGAACTTGAGCAGGAAAAGGTCAAATCTGCTAATACCAAAGAGAAGCTTAGTATGGCTGTGACAAAAGGAAAGGCATTGGTACAACAGCGAGATTCACTAAAGACGTCTCTGGCTGGTAAATCCAGTGAGCTTGAGAAATGCTTAATTGAATTGCAGGAGAAGTCAGCTGCACTAGAAGCCGCTGAACTTACTAAAGAGGTGTTGGCCCGGAGTGAAAATATGGTTGCATCCCTGAATACTTCACTACAACAAAATAATTCCATTTTTGAGCAAGTACAAGAAATCTTGTCTCACGCCGAACTTGATCAGCCTGAAATGCTTGATTTGCCTGAGAGACTTCAATGGCTTGTGGATGACAGGAATAAACTGCAGGGTGCCTTCCTGGAATTACGCAAAATGAAGGAATCTCTATCTCTACTGGACTTACCAGAGCCTGTTTCATCATCTGATCTAGAATCACAAATGAACTGGCTTATAGATTCTTCTCACAAGGCCCGCAATGATATTTATGCTCTACAGGAAGAAATTTCTACAATCAAGGAAGCATCCGTCAACTGTATTGATCATTTGAGTATTTTGCTTTTGGTAGACTCGCAGGAAAAAGATTACCTTCAGTCTGAATTAACAGATTTGAGGTTCGAATATGGAGAACTTGTTGGCAAGAACCGTCAGATTTCTTTGGAGAAAGATCAGATTGTGAAAATGTTAGTAGATTTTTCTGGTCTAAACATGGAAGATGAAGGAATTGATCAATTCTCTTCTAACACTTTGATGATCATTGACTTATGCTTTCAAAAAGTAAAAGGGCAGAATGGTACCCTCACCAGAGCATCTCATATTGACCCCGAATTGTTTGAAAGGGTTCAAAGTCTTCTGTATGTTAGGGATCAGGGCTTAAACCTCTACGAGGATATACTGGAAGAAGATATTCTAATTAGATCAGATGTGAATAAACTGGCCAATGAGTTAAAAGTGGTATCTGACGAAGTTATAGCACTGAAAGAAGAAAGGAGTTCTCTGCTGAAAGACCTTGAACGATCAGAGGAGAAGACTGGCATGCTTAGGGACAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGATTGGTTCAAGATAGGGACAATCTAAAAGGTCTTATAAACGAAAAAAACTCAGAGATTGAGCAGTTGCAGGTTGATTTGCAGAAGCAAGAATCTGTAGTTTCTGAATACAAGGATGAGATCAATAGATTGTCCATTGATTTGGAAATAGATAGGGACAATCTACAAAGTCTTATAAATGAAAAGAACTCAGAGATTGAGCAGTTGAAGGTTGATTTGCAGAAGCAAGAATCTATAGTTTATGAATACAAGGATGAGATCAATAGATTGTCCAGTGATTCGGAAAGAGATAGGGACAATCAACAAGGTCTCATAAATGAAAAGAACTCAGAGATTGATCAGTTGAAGGTTGATTTGCAGAAGCAAGAGTCTGTAGTTTCTGAATACAAGGACGAGATCAATAGATTGTCTAATGATTCGGAAAGAGATAGGGACAATCTACAAGGTCTCATAAACGAAAAGAACTCAGAGATTGAGCAGTTGAAGGTTGATTTGCAGAAGCAAGAGTCTGTAGTTTCTGAATACAATGATGAGATCAATAGATTGTCCAGTGATTTGGAAAGCATTCCAAAGCTAGAGGCTGATCTTTTGGAAATAAAAAGGGAAAGGAATCAGTTTGAACAGTTCTTGATGGAGAGCAATAACATGTTACAGAGAGTGATGGAGTGCATTGATGGTATTGCTCTTCCAGTTGATCCAGTTTTTGGTGAACCTATGGAAAAGGTGAAATGGCTTGCTGGTTATGTCAATGAATGCCAAGAAGCTAAGGTACATGTAGAGCAACAGTTGCAGTTGGTAAAGGAGGAGGCCAGTATACTTGAAGCTAAATTGGCAGAAGCCCAAGAAACTGTAAGCTCCCACGGGCAAAGATTATCTTCTTCAGAGGGAAGTGTTTCTCAACTTGCTGAAGAAAAGGCAGAGTTAGAACACGAGAAAGAAAAAGTTGTGGAAGAGTTGCAGAAAGTTAAAGAAAAAGTTGCTGAAGTTTGCAGTACTAGTAAGTCACTTGAAGACGCTTTATCACAGGCAGAAAAAGATATTTCTGTTCTTTCCGAGGAGAAAGAGCAGGCTCAGGTATCTAGAGTTGCTGCAGAGACAGAGTTAGAGAGAGTTAGAGATGAAGCAGACAGGCAGACAAGAGAACTATCAGAGGCCAGCAGTACCATAAAGGATCTAGAAGTTGAACTATCTCAGGTTGAGAGTAAGGTGAATTTATTGACTGAAAAGAATAATGCTGATCAAGTTGTCAAGACTGAATTGGAAAATGAATTGAAGAAGCTGCAAGATGAAGCAGCAAATAATGCTAGCAAGTTGGTAGGTTCCTCTGAAACTATAAAAGCACTGGAAGATGCATTGTTGAAGGCGAAAGATGATATTTCTACCCTGGAAGATGCAAATAAAATTGCCAAACAGGAGATATCTTCGCTCAATTTAAAGTTAAATTCATACATGGATGAGTTAGCTGGAAAGAATGGCAGCTTAGAGAACAAATCTCTAGAGCTCATTGGATTCCTTAACGATCTTCAGGTGCTTATGAAAGACAATACTCTATTTCTCAGGATAAAACAATGCTTTGAGAGAAAATGTGAGACCCTGAAGAATGTGGATCTCATTGTGAGCAAAGTAAGAAACCATATTTCCCTGTCCGCTAAGGATTCTGGAGGGCACCTTGAGATGGAGGAAGATCCACCTCTGAGAAAATCATTTTCAGATGGCCTTGAAAAATTTGAAGTCGAACTGGACAACAGAGAGATTAATGGAATTGATATTGACACCATAATTTCATCATTTGGAAAGATTGTGAAAGGATTTCAGTTGAGAAATGAACATATTGCAGATAAGTTTGATGAATTTTCTGATTCTATCGATGCCTTTATTTCTCCTCTCCATGGAAAACTACTGGAAACAGAGTCTAATATAATGGCTATTGTTGAGCACGTGGAAGTTATGAAAGAAAAGGCAAATAGCGTGACAAAGTTGAACGAAGAAAAGGATAATATTATTGCCACTTTAGAGAACGATATCAGTTTATTGCTGTCTGCATGCACTGATTCTACCAGTGAACTTCAGAAGGAAGTTCACCAAAATCTTGGGCAACTTGGCTCCACTTTTGAGGTTGAGAAGCTAAACCACAAAGCAGATGAACAAGTAGAACATCATAAGAACAACACATATGCAGACGCTTCAAGAAAGTTGATAAATGCTTCTGGAGAAGTTCAAACTTTGATTAGACAGTTCAAATTTAAAAGTGAGCAAGTAGATGCAACAGTTAGAGATTTGCAGACCAAATTGAACGAAACAACAGTTGCTTTTGAATTGGCTACAGAGGAGAGAGACTTAAATAAGAACAAAGTTTTGCAGTTGGAGTCTGATATTCAATCACTCGAAAATGCATGCACTGAGCTTAAGGATAAGGTAGAGCATTATCATGTTCTAGAAGAAAAATTAAAGGACAAAGAGGCAGAGATTTCATCAATGCACAGTGCTTCGTTGGAAAAAGAAGAAAGCTCCATCCTTTCAACATCTCAGTTGAGAGATATCTTTGACAAGATAGATAGGATTGAAATCCCTATTGTAGAATCTGAAGATAGTATGGAGTCACATACTTCAGACCCTGTGAAGAAGCTCTTTTACATTATTGATAGTGTTACTAGGTTGCATCATCAAATAAATTCTCTATCTCATGATAAAAAAGAGACGCAATCAATCCTCGAAACTAAGGCCCTTGAAATTAAGGATCTAAAGGAAGAAGTTAAACAACTCAATAGACACTGTGAAGACTCAAAAATGATCAAGAATGAACTATCTGAATTGACGTCTGTCTTAGAAAAAATAATAGATGTTTTGGGAGCCAACAACTGGGTTGTAGATAGACAATCTAAAGGTTTTAGAGAATTATTGCCGCAATTGGAAAAGCATATCATTGCCATTCTTTCAGAATCTGAAAATTCAAAATCTAAGGCCCATGAACTTGGTATTAAATTAGTTGGAAGTCAGAAGGTTATTGATGACTTAACGACCAAGGTTAAATTACTTGAAGATTCGATTCAAGATAGGATTTCTCAGCCAGAAATTGTCCAGGAAAGGAGCATATATGAAGCACCTTCATTGCCTGCTGGCTCCGAGATAACTGAAGTTGAAGAGGGATCTCTTGGCAAAAAACCGTTATCTCCTGTCCCATCGGCTGCTCACGTGCGAAATATGCGAAAAGGATCTAGTGACCATCTTGCTCTTGATATTGGTGTGGAGTCTGATCATTTAATCAACAGTGCTGATACCGATGATGATAAAGGTCATGCGTTCAAGTCTCTGAACACTTCTGGATTCGTACCGAAGCAAGGAAAGCTCATTGCAGATCGTATTGATGGAATCTGGGTATCCGGTAGTGGGGCTCTTATGAATCGTCCCAGAGCAAGATTAGGACTCATTGGCTATTTGCTAATCATGCATTTATGGCTACTGGGGACGATATTGTAG

Protein sequence

>Msa0373700

MSENNHLSERILDSDSQSNGVNTESNIDTYQNQVTHVDLKDEVLGESEDVKSTEDNMFVDCPDELITFDGKQKEEEAVAADENEEESQIMHQQQSHFGELNNGVAGELEQLRVKLENAVAEKESVVNEYQELLSVRDREIENLNAKVSQLMISNEILQASSEAQHEKDGDIDNVIDRTISSLASVVNQGQVLDESRSGKIVYIEESTAFLIEKYNQMLSDIYQVGQSFSEVGLDTNEQEFGNILVGARGGLLELKRKEDDLIEKLSHVEGENQKLVEELDKERAVIETLNTELGNIKVELEQEKVKSANTKEKLSMAVTKGKALVQQRDSLKTSLAGKSSELEKCLIELQEKSAALEAAELTKEVLARSENMVASLNTSLQQNNSIFEQVQEILSHAELDQPEMLDLPERLQWLVDDRNKLQGAFLELRKMKESLSLLDLPEPVSSSDLESQMNWLIDSSHKARNDIYALQEEISTIKEASVNCIDHLSILLLVDSQEKDYLQSELTDLRFEYGELVGKNRQISLEKDQIVKMLVDFSGLNMEDEGIDQFSSNTLMIIDLCFQKVKGQNGTLTRASHIDPELFERVQSLLYVRDQGLNLYEDILEEDILIRSDVNKLANELKVVSDEVIALKEERSSLLKDLERSEEKTGMLRDKLSMAVKKGKGLVQDRDNLKGLINEKNSEIEQLQVDLQKQESVVSEYKDEINRLSIDLEIDRDNLQSLINEKNSEIEQLKVDLQKQESIVYEYKDEINRLSSDSERDRDNQQGLINEKNSEIDQLKVDLQKQESVVSEYKDEINRLSNDSERDRDNLQGLINEKNSEIEQLKVDLQKQESVVSEYNDEINRLSSDLESIPKLEADLLEIKRERNQFEQFLMESNNMLQRVMECIDGIALPVDPVFGEPMEKVKWLAGYVNECQEAKVHVEQQLQLVKEEASILEAKLAEAQETVSSHGQRLSSSEGSVSQLAEEKAELEHEKEKVVEELQKVKEKVAEVCSTSKSLEDALSQAEKDISVLSEEKEQAQVSRVAAETELERVRDEADRQTRELSEASSTIKDLEVELSQVESKVNLLTEKNNADQVVKTELENELKKLQDEAANNASKLVGSSETIKALEDALLKAKDDISTLEDANKIAKQEISSLNLKLNSYMDELAGKNGSLENKSLELIGFLNDLQVLMKDNTLFLRIKQCFERKCETLKNVDLIVSKVRNHISLSAKDSGGHLEMEEDPPLRKSFSDGLEKFEVELDNREINGIDIDTIISSFGKIVKGFQLRNEHIADKFDEFSDSIDAFISPLHGKLLETESNIMAIVEHVEVMKEKANSVTKLNEEKDNIIATLENDISLLLSACTDSTSELQKEVHQNLGQLGSTFEVEKLNHKADEQVEHHKNNTYADASRKLINASGEVQTLIRQFKFKSEQVDATVRDLQTKLNETTVAFELATEERDLNKNKVLQLESDIQSLENACTELKDKVEHYHVLEEKLKDKEAEISSMHSASLEKEESSILSTSQLRDIFDKIDRIEIPIVESEDSMESHTSDPVKKLFYIIDSVTRLHHQINSLSHDKKETQSILETKALEIKDLKEEVKQLNRHCEDSKMIKNELSELTSVLEKIIDVLGANNWVVDRQSKGFRELLPQLEKHIIAILSESENSKSKAHELGIKLVGSQKVIDDLTTKVKLLEDSIQDRISQPEIVQERSIYEAPSLPAGSEITEVEEGSLGKKPLSPVPSAAHVRNMRKGSSDHLALDIGVESDHLINSADTDDDKGHAFKSLNTSGFVPKQGKLIADRIDGIWVSGSGALMNRPRARLGLIGYLLIMHLWLLGTIL*