AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1269890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269890 MtrunA17_Chr8g0334391 98.214 56 1 0 18 73 373 428 8.18e-36 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269890 AT5G01010.4 77.778 54 12 0 18 71 413 466 2.73e-26 99.8
Msa1269890 AT5G01010.2 77.778 54 12 0 18 71 420 473 2.80e-26 99.8
Msa1269890 AT5G01010.5 77.778 54 12 0 18 71 420 473 2.80e-26 99.8
Msa1269890 AT5G01010.1 77.778 54 12 0 18 71 379 432 3.09e-26 99.4
Msa1269890 AT5G01010.3 78.049 41 9 0 18 58 379 419 2.70e-18 77.4

Find 144 sgRNAs with CRISPR-Local

Find 547 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGTCAATCTCGATAATT+AGG 0.138301 8_3:+3246326 None:intergenic
TTCCTTATTGTACTCTAATT+TGG 0.147570 8_3:-3239166 Msa1269890:five_prime_UTR
GGGGAATTTCTGCACATTAA+TGG 0.230921 8_3:-3238838 Msa1269890:CDS
TCGTACTATGACCACTGATT+TGG 0.264731 8_3:-3246012 Msa1269890:five_prime_UTR
CTGGAAGCTATAAACTGATA+TGG 0.273766 8_3:-3238815 Msa1269890:CDS
AGAGGTTCATCACATTTCTT+AGG 0.283237 8_3:-3241691 Msa1269890:intron
TTAGGATATTGGATTTAGTT+TGG 0.287616 8_3:-3239236 Msa1269890:intron
TTTGTTTATTGTTAGGATAT+TGG 0.304837 8_3:-3239247 Msa1269890:intron
TTATTCTCATGGTGGTTGAT+TGG 0.332325 8_3:-3238997 Msa1269890:CDS
CGTACTATGACCACTGATTT+GGG 0.334259 8_3:-3246011 Msa1269890:five_prime_UTR
TTAGTCAATCTCGATAATTA+GGG 0.346894 8_3:+3246327 None:intergenic
TGTATAAAATTGTCAATTGT+AGG 0.349727 8_3:-3238161 Msa1269890:three_prime_UTR
AGTACAAGGCAAGATAAATA+TGG 0.362025 8_3:-3239354 Msa1269890:intron
TTCATTCCAGCAGATGTTGC+TGG 0.364334 8_3:-3239842 Msa1269890:five_prime_UTR
GGCTGCTTCTACAGAGGGTT+TGG 0.370132 8_3:-3246129 Msa1269890:five_prime_UTR
ATCAATCTTATGTGGAGGTT+GGG 0.375986 8_3:+3245962 None:intergenic
CGACAGGAAGGCCCTAGTTA+TGG 0.377287 8_3:+3246103 None:intergenic
ATGAAGATTGATAAGGCTTC+TGG 0.378509 8_3:+3239128 None:intergenic
CATCAATCTTATGTGGAGGT+TGG 0.384125 8_3:+3245961 None:intergenic
GTTCTTCATCAAGCAATATC+AGG 0.386716 8_3:+3238085 None:intergenic
GATTCTTCCTTTCATTATCA+TGG 0.387212 8_3:-3243426 Msa1269890:five_prime_UTR
TTGCTGGTGCAGTGGAAATA+AGG 0.393624 8_3:-3239826 Msa1269890:intron
ACTGTAGGTGCTACGGTATA+AGG 0.397024 8_3:-3238408 Msa1269890:intron
GAGAAGAAGAAGAAAAGAAA+GGG 0.410720 8_3:-3246206 Msa1269890:five_prime_UTR
AACCAAATTAGAGTACAATA+AGG 0.410834 8_3:+3239164 None:intergenic
AAGAAAAGAAAGGGAGAGGT+GGG 0.412318 8_3:-3246197 Msa1269890:five_prime_UTR
AATGGCACTGGCTCTGCAAC+AGG 0.413130 8_3:+3238371 None:intergenic
CTGGATTACATTACCGTGTC+TGG 0.414338 8_3:+3245873 None:intergenic
AAAATTACTAGTACATCAAT+AGG 0.416004 8_3:+3238301 None:intergenic
AGAGAAGAAGAAGAAAAGAA+AGG 0.417999 8_3:-3246207 Msa1269890:five_prime_UTR
GCAAGCAGAGGTGGATGCTT+TGG 0.423060 8_3:-3245565 Msa1269890:five_prime_UTR
GATAGGAGGTGTAAAGGAGC+TGG 0.426347 8_3:-3238201 Msa1269890:three_prime_UTR
AGGGGAACAGTTAGCTGTCT+TGG 0.427621 8_3:-3241747 Msa1269890:five_prime_UTR
GTGGATGCTTTGGTAAATTC+TGG 0.428219 8_3:-3245555 Msa1269890:five_prime_UTR
GCTCAGCTTGGCTCTGCAAC+AGG 0.429973 8_3:-3245468 Msa1269890:five_prime_UTR
GATATTGCTTGATGAAGAAC+AGG 0.430713 8_3:-3238082 Msa1269890:three_prime_UTR
GGAGAAAGAGGAGGAGTGAA+GGG 0.434405 8_3:+3246062 None:intergenic
GACAGGAAGGCCCTAGTTAT+GGG 0.435903 8_3:+3246104 None:intergenic
GGAAGGGATAGGAGGTGTAA+AGG 0.439158 8_3:-3238207 Msa1269890:three_prime_UTR
TCATCGCACTTTGACCACTT+TGG 0.439826 8_3:-3245703 Msa1269890:five_prime_UTR
TTCGAGAGGGATCGATGAAT+GGG 0.445075 8_3:-3246255 Msa1269890:five_prime_UTR
TCCGATGGCTGCTTCTACAG+AGG 0.447189 8_3:-3246135 Msa1269890:five_prime_UTR
AATTGAACACATCTCGATCT+TGG 0.449135 8_3:+3238242 None:intergenic
AACAAAACATGATACAGAAC+TGG 0.451046 8_3:+3239049 None:intergenic
ACCCTCGTCAAGTACCTTGT+TGG 0.452026 8_3:-3245435 Msa1269890:five_prime_UTR
TGTTCAATTGATTTCTATGA+AGG 0.457670 8_3:-3238228 Msa1269890:three_prime_UTR
GTAGAAGCAGCCATCGGAAT+CGG 0.457672 8_3:+3246140 None:intergenic
AGCTGTTGATGTCTACACTA+TGG 0.459802 8_3:-3241720 Msa1269890:five_prime_UTR
ATTCGAGAGGGATCGATGAA+TGG 0.460080 8_3:-3246256 Msa1269890:five_prime_UTR
AGGGTTTGGTGCCCATAACT+AGG 0.461857 8_3:-3246115 Msa1269890:five_prime_UTR
GCGATGACGCTGCTCCTCCA+TGG 0.464270 8_3:+3243495 None:intergenic
GTATAAAATTGTCAATTGTA+GGG 0.468884 8_3:-3238160 Msa1269890:three_prime_UTR
ATTCTTCCTTTCATTATCAT+GGG 0.475061 8_3:-3243425 Msa1269890:five_prime_UTR
TTTGAGCTTCCCAAGAATAA+CGG 0.475966 8_3:+3245734 None:intergenic
CAAAGAAAGATCACGAAGAA+TGG 0.476155 8_3:+3238024 None:intergenic
TTACCCCATTTCATACGAAA+AGG 0.477327 8_3:+3237983 None:intergenic
GAAGTAAGGTGAGAGACGTC+TGG 0.478606 8_3:+3246041 None:intergenic
TTGCATCAGTCGAATGGCAC+TGG 0.479589 8_3:+3238359 None:intergenic
GAAGAAGAAAAGAAAGGGAG+AGG 0.480795 8_3:-3246201 Msa1269890:five_prime_UTR
ACTGCACCAGCAACATCTGC+TGG 0.481617 8_3:+3239836 None:intergenic
TTGGAGTTTGCAAGTCCTAC+CGG 0.482684 8_3:-3239217 Msa1269890:five_prime_UTR
TGATGAAGAACAGGATAGTA+AGG 0.486091 8_3:-3238073 Msa1269890:three_prime_UTR
GTGATCGATATGCTCTTCTC+TGG 0.488861 8_3:-3245521 Msa1269890:five_prime_UTR
TGGAGAAAGAGGAGGAGTGA+AGG 0.493800 8_3:+3246061 None:intergenic
TGGAAGCTATAAACTGATAT+GGG 0.497013 8_3:-3238814 Msa1269890:CDS
ACGGAAAATTGAATATTGTC+AGG 0.498862 8_3:+3245753 None:intergenic
GGATAGTAAGGATAGTAAGA+AGG 0.502124 8_3:-3238061 Msa1269890:three_prime_UTR
ATGATAATGAAAGGAAGAAT+CGG 0.504065 8_3:+3243428 None:intergenic
CAATTGATTTCTATGAAGGA+AGG 0.504987 8_3:-3238224 Msa1269890:three_prime_UTR
GGCATGAGTAATTAGAACTT+CGG 0.505469 8_3:+3238263 None:intergenic
TGAGAGACGTCTGGAGAAAG+AGG 0.507695 8_3:+3246050 None:intergenic
GAACTGGATAACGGAGAAGA+AGG 0.512278 8_3:+3239065 None:intergenic
GAAGAAAAGAAAGGGAGAGG+TGG 0.512449 8_3:-3246198 Msa1269890:five_prime_UTR
TAGTACGAAGCAGAGAAGTA+AGG 0.514503 8_3:+3246027 None:intergenic
GAGGAATAAGCAAGCAGAGG+TGG 0.517070 8_3:-3245574 Msa1269890:five_prime_UTR
AATTTCTGCACATTAATGGC+TGG 0.520564 8_3:-3238834 Msa1269890:CDS
TAGGAAGCCAACTGTTGTAA+TGG 0.521221 8_3:-3238121 Msa1269890:three_prime_UTR
ATTGAGGTGAGGCTGTATAA+TGG 0.524864 8_3:+3243463 None:intergenic
CCGATGGCTGCTTCTACAGA+GGG 0.525140 8_3:-3246134 Msa1269890:five_prime_UTR
GAGGAGCAGCGTCATCGCTA+TGG 0.528258 8_3:-3243490 Msa1269890:five_prime_UTR
CAGTAAACTCGTATATTGCA+TGG 0.528695 8_3:-3239388 Msa1269890:five_prime_UTR
CGATGACGCTGCTCCTCCAT+GGG 0.529566 8_3:+3243496 None:intergenic
AAAGAGATAAGTGTTCCAGC+TGG 0.530707 8_3:-3239716 Msa1269890:five_prime_UTR
TCTTCTCTGGAAACAACAAA+TGG 0.535849 8_3:-3245508 Msa1269890:five_prime_UTR
ATATCAGGTTATACTTTCAG+TGG 0.541751 8_3:-3239414 Msa1269890:intron
ATGGGCGATGAAGATTGATA+AGG 0.542844 8_3:+3239121 None:intergenic
TCTATGAAGGAAGGGATAGG+AGG 0.544149 8_3:-3238215 Msa1269890:three_prime_UTR
AGAAGGCCTCTGCATTATGC+AGG 0.549229 8_3:-3238327 Msa1269890:three_prime_UTR
CTTATCTACTGGTAGGCCCA+TGG 0.549474 8_3:-3243512 Msa1269890:intron
CATGATACAGAACTGGATAA+CGG 0.550313 8_3:+3239056 None:intergenic
GGCAGATTAATGACGATGAC+GGG 0.550469 8_3:-3243638 Msa1269890:intron
TCAGACTCGTATCGGCGGTA+AGG 0.558609 8_3:+3238956 None:intergenic
ATTTCTATGAAGGAAGGGAT+AGG 0.559182 8_3:-3238218 Msa1269890:three_prime_UTR
GGGTTTGGTGCCCATAACTA+GGG 0.559944 8_3:-3246114 Msa1269890:five_prime_UTR
TGGAGTTTGCAAGTCCTACC+GGG 0.563720 8_3:-3239216 Msa1269890:five_prime_UTR
GAGAAAGAGGAGGAGTGAAG+GGG 0.566570 8_3:+3246063 None:intergenic
ACATCTGCTGGAATGAAGAA+AGG 0.566781 8_3:+3239848 None:intergenic
AGAAGGCAATTAGCTCAGCT+TGG 0.567507 8_3:-3245480 Msa1269890:five_prime_UTR
AGCGTTCGCGTTGTTGTCTG+AGG 0.569416 8_3:+3245601 None:intergenic
TCCTCTGATTCCGATTCCGA+TGG 0.570194 8_3:-3246150 Msa1269890:five_prime_UTR
AATTGATTTCTATGAAGGAA+GGG 0.572013 8_3:-3238223 Msa1269890:three_prime_UTR
TATAATGACTGTAGGTGCTA+CGG 0.577224 8_3:-3238415 Msa1269890:intron
TCTGGAAACAACAAATGGAA+AGG 0.577715 8_3:-3245503 Msa1269890:five_prime_UTR
CTCCAACAAGGTACTTGACG+AGG 0.578652 8_3:+3245433 None:intergenic
AAGAGATAAGTGTTCCAGCT+GGG 0.581420 8_3:-3239715 Msa1269890:five_prime_UTR
ATCGTGCCCATGATAATGAA+AGG 0.583994 8_3:+3243419 None:intergenic
GATTGACTAATAACTGAGCA+TGG 0.584896 8_3:-3246314 Msa1269890:five_prime_UTR
AACAACAAATGGAAAGGAGA+AGG 0.585723 8_3:-3245497 Msa1269890:five_prime_UTR
ATAGGAGGTGTAAAGGAGCT+GGG 0.592784 8_3:-3238200 Msa1269890:three_prime_UTR
AGCAGATGTTGCTGGTGCAG+TGG 0.597546 8_3:-3239834 Msa1269890:five_prime_UTR
AAATTGAATATTGTCAGGTG+TGG 0.598417 8_3:+3245758 None:intergenic
GTTTGTCGTAGTAAGACGAC+AGG 0.600262 8_3:+3246087 None:intergenic
AGTAAACTCGTATATTGCAT+GGG 0.604344 8_3:-3239387 Msa1269890:five_prime_UTR
AGAGAAGAGCATATCGATCA+CGG 0.605518 8_3:+3245523 None:intergenic
TAACTTGGTCAGACTCGTAT+CGG 0.609024 8_3:+3238948 None:intergenic
TCTACACTATGGAGTTTGAG+AGG 0.613870 8_3:-3241709 Msa1269890:five_prime_UTR
CCCTCTGTAGAAGCAGCCAT+CGG 0.614975 8_3:+3246134 None:intergenic
GCCATCGGAATCGGAATCAG+AGG 0.615916 8_3:+3246149 None:intergenic
GTACCTTGTTGGAGTTCCTG+AGG 0.616247 8_3:-3245424 Msa1269890:intron
AAGGAAGAGAATATTCGAGA+GGG 0.616973 8_3:-3246268 Msa1269890:five_prime_UTR
AAAGGAAGAGAATATTCGAG+AGG 0.617206 8_3:-3246269 Msa1269890:five_prime_UTR
AGGCAGATTAATGACGATGA+CGG 0.621786 8_3:-3243639 Msa1269890:five_prime_UTR
ACAATCTAATTGGCCAGACA+CGG 0.626292 8_3:-3245886 Msa1269890:intron
AACTGGATAACGGAGAAGAA+GGG 0.635687 8_3:+3239066 None:intergenic
GGCACTGGCTCTGCAACAGG+AGG 0.638970 8_3:+3238374 None:intergenic
ATAAGATTGATGAAAACATG+TGG 0.639942 8_3:-3245950 Msa1269890:five_prime_UTR
ATCATCAATTCCCAAATCAG+TGG 0.640263 8_3:+3246001 None:intergenic
ATATTAATTTGTCAGAAAAG+GGG 0.642676 8_3:-3241765 Msa1269890:intron
AGAGAGGAATAAGCAAGCAG+AGG 0.647377 8_3:-3245577 Msa1269890:five_prime_UTR
TCGGACAGAAAGAATCATTG+AGG 0.651275 8_3:+3243447 None:intergenic
CAGAAAGAATCATTGAGGTG+AGG 0.658338 8_3:+3243452 None:intergenic
GAGACGTCTGGAGAAAGAGG+AGG 0.662195 8_3:+3246053 None:intergenic
TAGTCAATCTCGATAATTAG+GGG 0.662872 8_3:+3246328 None:intergenic
GTCGTAGTAAGACGACAGGA+AGG 0.670921 8_3:+3246091 None:intergenic
TCCAACAAGGTACTTGACGA+GGG 0.671006 8_3:+3245434 None:intergenic
AGGTATCCTGCATAATGCAG+AGG 0.680243 8_3:+3238321 None:intergenic
AGAGTTCCTCGAAAATCTTG+TGG 0.681900 8_3:+3245624 None:intergenic
AACAACGCGAACGCTCAGAG+AGG 0.685075 8_3:-3245593 Msa1269890:five_prime_UTR
CTTGGTCAGACTCGTATCGG+CGG 0.685715 8_3:+3238951 None:intergenic
GATTTGGAAAGATTCCAAAG+TGG 0.692886 8_3:+3245689 None:intergenic
ATCTACTGGTAGGCCCATGG+AGG 0.694772 8_3:-3243509 Msa1269890:intron
TCGAGAGGGATCGATGAATG+GGG 0.698183 8_3:-3246254 Msa1269890:five_prime_UTR
ATACCTCAGGAACTCCAACA+AGG 0.706412 8_3:+3245421 None:intergenic
GAGGTGAGGCTGTATAATGG+TGG 0.725726 8_3:+3243466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATAAAGAAGAA+AGG + chr8_3:3240732-3240751 None:intergenic 10.0%
!!! TACTTTTCTTTTTAAAATTA+AGG + chr8_3:3241332-3241351 None:intergenic 10.0%
!!! CTTATTTTTCTTTTTTATTA+GGG - chr8_3:3241406-3241425 Msa1269890:intron 10.0%
!!! TTTTTTTTTTTTGTGAATAT+TGG - chr8_3:3242809-3242828 Msa1269890:intron 10.0%
!!! TTAGTTCTTTTATAAAATTT+GGG - chr8_3:3243000-3243019 Msa1269890:intron 10.0%
!!! TTATTCAATGAATAAAATTT+TGG + chr8_3:3244192-3244211 None:intergenic 10.0%
!!! TTTTTTTGTAATGTAATTTT+AGG - chr8_3:3245454-3245473 Msa1269890:five_prime_UTR 10.0%
!!! TTTTTTGTAATGTAATTTTA+GGG - chr8_3:3245455-3245474 Msa1269890:five_prime_UTR 10.0%
!! ATATATTGATGAATTTAAAT+CGG - chr8_3:3245648-3245667 Msa1269890:five_prime_UTR 10.0%
!! AACAAAGAGAATAAAAAAAA+AGG - chr8_3:3238026-3238045 Msa1269890:three_prime_UTR 15.0%
!!! CTGAAAATTCTAATTTTATA+TGG + chr8_3:3239747-3239766 None:intergenic 15.0%
!! CAAATAAATATCAAAATCAT+TGG + chr8_3:3241217-3241236 None:intergenic 15.0%
!!! GCTTATTTTTCTTTTTTATT+AGG - chr8_3:3241405-3241424 Msa1269890:intron 15.0%
!!! GCTTATTTTTCTTTTTTATT+AGG - chr8_3:3241405-3241424 Msa1269890:intron 15.0%
!!! TTTTTCTTTTTTATTAGGAA+TGG - chr8_3:3241603-3241622 Msa1269890:intron 15.0%
!!! AAGATTTTATTTTTCTTCAT+TGG + chr8_3:3241812-3241831 None:intergenic 15.0%
!! TTATATTGAAAAAAAACCTT+GGG + chr8_3:3241931-3241950 None:intergenic 15.0%
!!! GTTATCTTTTATTTTTGTTT+TGG - chr8_3:3242313-3242332 Msa1269890:intron 15.0%
!!! GTTAGTTCTTTTATAAAATT+TGG - chr8_3:3242999-3243018 Msa1269890:intron 15.0%
!! ATTAACAACATAGATAAAAT+TGG + chr8_3:3243623-3243642 None:intergenic 15.0%
!! TAGAAGATTTAGAAATTTAT+AGG - chr8_3:3244058-3244077 Msa1269890:intron 15.0%
!!! ATTACAAAAAAATTTAAGAC+GGG + chr8_3:3245446-3245465 None:intergenic 15.0%
!! CATTACAAAAAAATTTAAGA+CGG + chr8_3:3245447-3245466 None:intergenic 15.0%
!!! TTTTTGTAATGTAATTTTAG+GGG - chr8_3:3245456-3245475 Msa1269890:five_prime_UTR 15.0%
!! TATATTGATGAATTTAAATC+GGG - chr8_3:3245649-3245668 Msa1269890:five_prime_UTR 15.0%
!! AGATTGTTGAAGTAAAAAAA+TGG + chr8_3:3238414-3238433 None:intergenic 20.0%
!!! TTTTACTTCAACAATCTAAT+TGG - chr8_3:3238417-3238436 Msa1269890:intron 20.0%
!!! GATACATTTTACATAGAAAT+AGG + chr8_3:3238974-3238993 None:intergenic 20.0%
!! ACATTAAATCTAATGAAGAA+TGG + chr8_3:3239042-3239061 None:intergenic 20.0%
!!! TCATAGTAGTTTTAAAATCA+GGG - chr8_3:3239348-3239367 Msa1269890:intron 20.0%
!!! TTATCCATTATTTAGTTTCA+AGG + chr8_3:3239468-3239487 None:intergenic 20.0%
!!! ATTGTTTTGTTTTGAGTTTT+TGG + chr8_3:3239804-3239823 None:intergenic 20.0%
!! AAAAACTCAAAACAAAACAA+TGG - chr8_3:3239803-3239822 Msa1269890:intron 20.0%
!! TAAAAACTTCAAAATTTCGT+GGG + chr8_3:3240058-3240077 None:intergenic 20.0%
!! TTAAAAACTTCAAAATTTCG+TGG + chr8_3:3240059-3240078 None:intergenic 20.0%
!!! AATTTTGAAGTTTTTAAACC+AGG - chr8_3:3240062-3240081 Msa1269890:intron 20.0%
!!! ATTTTGAAGTTTTTAAACCA+GGG - chr8_3:3240063-3240082 Msa1269890:intron 20.0%
!! TATGGTAATTAGAATGTATT+TGG - chr8_3:3240377-3240396 Msa1269890:intron 20.0%
!! ATTTATCATAAGTATCACAT+GGG + chr8_3:3240535-3240554 None:intergenic 20.0%
!! AATTTATCATAAGTATCACA+TGG + chr8_3:3240536-3240555 None:intergenic 20.0%
!!! TTTTCTTTTTTATTAGGGAA+TGG - chr8_3:3241411-3241430 Msa1269890:intron 20.0%
!!! TTTCTTTTTTATTAGGGAAT+GGG - chr8_3:3241412-3241431 Msa1269890:intron 20.0%
!!! CAAAAATACTTTTCCAAAAA+AGG + chr8_3:3241466-3241485 None:intergenic 20.0%
!! GTTATATTGAAAAAAAACCT+TGG + chr8_3:3241932-3241951 None:intergenic 20.0%
!! TCAACATATTCACTAATAAT+GGG + chr8_3:3242118-3242137 None:intergenic 20.0%
!!! TTTATGGTTAGAAGATTTTA+GGG - chr8_3:3242233-3242252 Msa1269890:intron 20.0%
!!! CATATTAATTTGTCAGAAAA+GGG - chr8_3:3242547-3242566 Msa1269890:intron 20.0%
!!! ATATTAATTTGTCAGAAAAG+GGG - chr8_3:3242548-3242567 Msa1269890:intron 20.0%
!!! TGGTTTTTATGCAAAATTTA+TGG - chr8_3:3242829-3242848 Msa1269890:intron 20.0%
!!! TTCTTTTATAAAATTTGGGT+TGG - chr8_3:3243004-3243023 Msa1269890:intron 20.0%
!! AAGAAATAGATGATATTAAG+AGG - chr8_3:3243490-3243509 Msa1269890:five_prime_UTR 20.0%
!! AGAAATAGATGATATTAAGA+GGG - chr8_3:3243491-3243510 Msa1269890:five_prime_UTR 20.0%
!! GAATGATAAATTAATGCTTA+TGG + chr8_3:3243675-3243694 None:intergenic 20.0%
!! GACAATATCAAATAATTCAA+CGG + chr8_3:3244016-3244035 None:intergenic 20.0%
!!! ATAACTTCCTAATTTTGAAT+TGG - chr8_3:3244208-3244227 Msa1269890:intron 20.0%
!! AAAAAGAAGTTTAGTATAGA+AGG + chr8_3:3245049-3245068 None:intergenic 20.0%
!!! ACTTCTTTTTGTTTATTGTT+AGG - chr8_3:3245059-3245078 Msa1269890:intron 20.0%
!! TTTGTTTATTGTTAGGATAT+TGG - chr8_3:3245066-3245085 Msa1269890:intron 20.0%
!! AAGAGATTGAAGATAAAAAT+GGG + chr8_3:3245213-3245232 None:intergenic 20.0%
!! TAAGAGATTGAAGATAAAAA+TGG + chr8_3:3245214-3245233 None:intergenic 20.0%
!!! ATTTTTATCTTCAATCTCTT+AGG - chr8_3:3245213-3245232 Msa1269890:intron 20.0%
!!! ACATTCAACTTTTTTTAGAA+AGG - chr8_3:3245529-3245548 Msa1269890:five_prime_UTR 20.0%
!!! ATACAAATATGCTGATTAAT+TGG - chr8_3:3245621-3245640 Msa1269890:five_prime_UTR 20.0%
!!! TACAAATATGCTGATTAATT+GGG - chr8_3:3245622-3245641 Msa1269890:five_prime_UTR 20.0%
!! ATAGAAGAAACACATATAAT+AGG + chr8_3:3245712-3245731 None:intergenic 20.0%
!! AAAATTACTAGTACATCAAT+AGG + chr8_3:3246015-3246034 None:intergenic 20.0%
!!! CAATTGACAATTTTATACAA+AGG + chr8_3:3246151-3246170 None:intergenic 20.0%
!! TGTATAAAATTGTCAATTGT+AGG - chr8_3:3246152-3246171 Msa1269890:five_prime_UTR 20.0%
!! GTATAAAATTGTCAATTGTA+GGG - chr8_3:3246153-3246172 Msa1269890:five_prime_UTR 20.0%
! TTAGTCAATCTCGATAATTA+GGG + chr8_3:3237989-3238008 None:intergenic 25.0%
! ATTAGTCAATCTCGATAATT+AGG + chr8_3:3237990-3238009 None:intergenic 25.0%
!! ATGTTTTCATCAATCTTATG+TGG + chr8_3:3238362-3238381 None:intergenic 25.0%
! ATAAGATTGATGAAAACATG+TGG - chr8_3:3238363-3238382 Msa1269890:exon 25.0%
! AAGAGAATGAAAATGGAAAA+TGG + chr8_3:3238468-3238487 None:intergenic 25.0%
! TCTGTTAAAGAGAATGAAAA+TGG + chr8_3:3238475-3238494 None:intergenic 25.0%
!! ATTCAATTTTCCGTTATTCT+TGG - chr8_3:3238569-3238588 Msa1269890:intron 25.0%
!! TTCAATTTTCCGTTATTCTT+GGG - chr8_3:3238570-3238589 Msa1269890:intron 25.0%
! CAAATTCAATATTGTTCAAG+AGG + chr8_3:3239077-3239096 None:intergenic 25.0%
!! TAATGGAGTTTTCATCTATT+AGG + chr8_3:3239166-3239185 None:intergenic 25.0%
! TACAACTAGTTACATACTAA+TGG + chr8_3:3239183-3239202 None:intergenic 25.0%
! ATTAGTATGTAACTAGTTGT+AGG - chr8_3:3239182-3239201 Msa1269890:five_prime_UTR 25.0%
! TTAGTATGTAACTAGTTGTA+GGG - chr8_3:3239183-3239202 Msa1269890:five_prime_UTR 25.0%
!!! GTCATAGTAGTTTTAAAATC+AGG - chr8_3:3239347-3239366 Msa1269890:intron 25.0%
! AACAAAACTAAATTAGTTGC+AGG - chr8_3:3239489-3239508 Msa1269890:intron 25.0%
! GAATGCAATATTTGAATAAC+AGG - chr8_3:3239521-3239540 Msa1269890:intron 25.0%
! CAGACTAAGTTTATATTACA+AGG + chr8_3:3239564-3239583 None:intergenic 25.0%
! GAAAAAATGAGGTCAAAAAT+AGG + chr8_3:3239648-3239667 None:intergenic 25.0%
! CTAAACATGAATGCAAAAAA+TGG + chr8_3:3239706-3239725 None:intergenic 25.0%
!!! CATTTTTTGCATTCATGTTT+AGG - chr8_3:3239704-3239723 Msa1269890:five_prime_UTR 25.0%
!! TAGAATTTTCAGACAAAAGA+TGG - chr8_3:3239755-3239774 Msa1269890:intron 25.0%
!! CAGCTCAAAATTTGATTTAT+AGG + chr8_3:3239838-3239857 None:intergenic 25.0%
!!! CGGATCTTTTTATGTTTTTA+TGG + chr8_3:3239878-3239897 None:intergenic 25.0%
!!! ATTGCAAATTTTGAAACTTG+TGG + chr8_3:3239951-3239970 None:intergenic 25.0%
! TAACCATGCAAACAAAATTA+TGG + chr8_3:3240015-3240034 None:intergenic 25.0%
!!! ATTCATAATTAATTTGTCCC+TGG + chr8_3:3240083-3240102 None:intergenic 25.0%
! TAGTTATTGCAAGAATTTAC+AGG + chr8_3:3240140-3240159 None:intergenic 25.0%
! ATTATGTAGATAATGCATCT+AGG - chr8_3:3240329-3240348 Msa1269890:intron 25.0%
!! ATGATAATGAAAGGAAGAAT+CGG + chr8_3:3240888-3240907 None:intergenic 25.0%
! ATTCTTCCTTTCATTATCAT+GGG - chr8_3:3240888-3240907 Msa1269890:intron 25.0%
!! TATTCAAATGAACGGTTTTA+GGG + chr8_3:3241146-3241165 None:intergenic 25.0%
!! TTATTCAAATGAACGGTTTT+AGG + chr8_3:3241147-3241166 None:intergenic 25.0%
!! TACTTTTCCAAAAAAAGTGA+AGG + chr8_3:3241643-3241662 None:intergenic 25.0%
!! ATCTTCTCCTTGTATATTTT+TGG - chr8_3:3241759-3241778 Msa1269890:intron 25.0%
! GATCAATTATAATAGACGTA+CGG - chr8_3:3242008-3242027 Msa1269890:intron 25.0%
! CTCAACATATTCACTAATAA+TGG + chr8_3:3242119-3242138 None:intergenic 25.0%
! TTCAGGATAAGTTATGTTTA+TGG - chr8_3:3242217-3242236 Msa1269890:intron 25.0%
!! GTTTATGGTTAGAAGATTTT+AGG - chr8_3:3242232-3242251 Msa1269890:intron 25.0%
!! TTATGGTTAGAAGATTTTAG+GGG - chr8_3:3242234-3242253 Msa1269890:intron 25.0%
!!! GCATATTAATTTGTCAGAAA+AGG - chr8_3:3242546-3242565 Msa1269890:intron 25.0%
! GAAATAGATGATATTAAGAG+GGG - chr8_3:3243492-3243511 Msa1269890:five_prime_UTR 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr8_3:3243568-3243587 Msa1269890:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG - chr8_3:3243572-3243591 Msa1269890:intron 25.0%
! TATACAAGTCTCAATGAAAT+TGG + chr8_3:3243805-3243824 None:intergenic 25.0%
! TTGTATAATGTAAGATCCAA+TGG - chr8_3:3243818-3243837 Msa1269890:intron 25.0%
! TATCATATTATAGAAAGTCG+TGG - chr8_3:3244120-3244139 Msa1269890:intron 25.0%
! AAAAGGATGAATTTGAATAG+TGG + chr8_3:3244558-3244577 None:intergenic 25.0%
!! TATTCAAATTCATCCTTTTC+AGG - chr8_3:3244559-3244578 Msa1269890:intron 25.0%
! TCTAGATTATGCATACAATA+AGG + chr8_3:3244752-3244771 None:intergenic 25.0%
! TATGATGATCTTTGAATATC+AGG - chr8_3:3244884-3244903 Msa1269890:intron 25.0%
! TTAGTATAGAAGGATATCTT+AGG + chr8_3:3245039-3245058 None:intergenic 25.0%
! TTAGGATATTGGATTTAGTT+TGG - chr8_3:3245077-3245096 Msa1269890:intron 25.0%
! TTCCTTATTGTACTCTAATT+TGG - chr8_3:3245147-3245166 Msa1269890:intron 25.0%
! AACCAAATTAGAGTACAATA+AGG + chr8_3:3245152-3245171 None:intergenic 25.0%
! AAAAATGGCAAAACAAACAT+GGG + chr8_3:3245297-3245316 None:intergenic 25.0%
! AAAAAATGGCAAAACAAACA+TGG + chr8_3:3245298-3245317 None:intergenic 25.0%
!!! TTTGCCATTTTTTATTCTCA+TGG - chr8_3:3245305-3245324 Msa1269890:intron 25.0%
!! TTTCTTCTATTGTTACGTTT+TGG - chr8_3:3245722-3245741 Msa1269890:five_prime_UTR 25.0%
! TGTTATTGTATAATGACTGT+AGG - chr8_3:3245890-3245909 Msa1269890:five_prime_UTR 25.0%
!! TGTTCAATTGATTTCTATGA+AGG - chr8_3:3246085-3246104 Msa1269890:five_prime_UTR 25.0%
!! AATTGATTTCTATGAAGGAA+GGG - chr8_3:3246090-3246109 Msa1269890:five_prime_UTR 25.0%
!!! AATTGTAGGGTTTTATATTG+TGG - chr8_3:3246166-3246185 Msa1269890:five_prime_UTR 25.0%
!!! TTTTTTACCATTACAACAGT+TGG + chr8_3:3246202-3246221 None:intergenic 25.0%
TAGTCAATCTCGATAATTAG+GGG + chr8_3:3237988-3238007 None:intergenic 30.0%
AGAGAAGAAGAAGAAAAGAA+AGG - chr8_3:3238106-3238125 Msa1269890:three_prime_UTR 30.0%
GAGAAGAAGAAGAAAAGAAA+GGG - chr8_3:3238107-3238126 Msa1269890:three_prime_UTR 30.0%
! TTTTCATCAATCTTATGTGG+AGG + chr8_3:3238359-3238378 None:intergenic 30.0%
ATGAAAATGGAAAATGGATC+TGG + chr8_3:3238462-3238481 None:intergenic 30.0%
AAATTGAATATTGTCAGGTG+TGG + chr8_3:3238558-3238577 None:intergenic 30.0%
ACGGAAAATTGAATATTGTC+AGG + chr8_3:3238563-3238582 None:intergenic 30.0%
!! CATGATCAGCATTTTTGATT+TGG + chr8_3:3238643-3238662 None:intergenic 30.0%
!! ATCTAATGAAGAATGGATTG+TGG + chr8_3:3239035-3239054 None:intergenic 30.0%
AACGATTTCTTCTATTTGTG+TGG - chr8_3:3239139-3239158 Msa1269890:five_prime_UTR 30.0%
AACTTTACCATCTCAAAATC+CGG - chr8_3:3239232-3239251 Msa1269890:five_prime_UTR 30.0%
GGATATCATTAATGAGAAGT+GGG + chr8_3:3239438-3239457 None:intergenic 30.0%
TTCAGATATTGCATTCTTCA+GGG + chr8_3:3239617-3239636 None:intergenic 30.0%
TATGTCTACAGGAAAAAATG+AGG + chr8_3:3239659-3239678 None:intergenic 30.0%
TTTCTAGACTTTATGTCTAC+AGG + chr8_3:3239670-3239689 None:intergenic 30.0%
AAATTTGACCAGTGAGTATA+TGG + chr8_3:3239988-3240007 None:intergenic 30.0%
!! GTTCCATAATTTTGTTTGCA+TGG - chr8_3:3240009-3240028 Msa1269890:intron 30.0%
! AAACATGGAGTTTTTGTTGA+TGG + chr8_3:3240201-3240220 None:intergenic 30.0%
AATGATATTGCATCGAAACA+TGG + chr8_3:3240216-3240235 None:intergenic 30.0%
ATTATGCAGATAATGCAACT+AGG + chr8_3:3240267-3240286 None:intergenic 30.0%
ATTATCTGCATAATGCAACT+AGG - chr8_3:3240273-3240292 Msa1269890:intron 30.0%
CAACTAGGATATCTATACTA+TGG - chr8_3:3240288-3240307 Msa1269890:intron 30.0%
GCATTATCTACATAATGCAA+GGG + chr8_3:3240325-3240344 None:intergenic 30.0%
TGCATTATCTACATAATGCA+AGG + chr8_3:3240326-3240345 None:intergenic 30.0%
TACTATTCACACTGCAATTA+TGG - chr8_3:3240359-3240378 Msa1269890:intron 30.0%
! GACTGTTCTATTTGAGTTAT+AGG - chr8_3:3240634-3240653 Msa1269890:intron 30.0%
!! AGGTATTGCTTGATTTTACA+AGG - chr8_3:3240654-3240673 Msa1269890:intron 30.0%
GATTCTTCCTTTCATTATCA+TGG - chr8_3:3240887-3240906 Msa1269890:intron 30.0%
ATTAAAATACCAAAGATGCG+AGG + chr8_3:3240944-3240963 None:intergenic 30.0%
CAATTCAAAGATCACAGTTA+AGG + chr8_3:3240994-3241013 None:intergenic 30.0%
!! ATTCAAATGAACGGTTTTAG+GGG + chr8_3:3241145-3241164 None:intergenic 30.0%
AAACCGTTCATTTGAATAAC+TGG - chr8_3:3241148-3241167 Msa1269890:intron 30.0%
AACCGTTCATTTGAATAACT+GGG - chr8_3:3241149-3241168 Msa1269890:intron 30.0%
TACCCAGTTATTCAAATGAA+CGG + chr8_3:3241154-3241173 None:intergenic 30.0%
AATAACTGGGTAAAAAGTTG+TGG - chr8_3:3241162-3241181 Msa1269890:intron 30.0%
TATGGTTATGTTTAGATGGA+GGG + chr8_3:3241379-3241398 None:intergenic 30.0%
TCCATCTAAACATAACCATA+GGG - chr8_3:3241379-3241398 Msa1269890:intron 30.0%
! TACTTTTCCAAAAAAGGTGA+AGG + chr8_3:3241460-3241479 None:intergenic 30.0%
TATTAGGAATGGAAAGATAG+AGG - chr8_3:3241614-3241633 Msa1269890:intron 30.0%
TGGAACTCCAAAAATATACA+AGG + chr8_3:3241769-3241788 None:intergenic 30.0%
AAATAAAATCTTACGCACAG+TGG - chr8_3:3241820-3241839 Msa1269890:intron 30.0%
AATAAAATCTTACGCACAGT+GGG - chr8_3:3241821-3241840 Msa1269890:intron 30.0%
TTTCAATATAACGAGTAGCT+TGG - chr8_3:3241940-3241959 Msa1269890:intron 30.0%
AACATCCACTACTAATTGAT+TGG - chr8_3:3242179-3242198 Msa1269890:intron 30.0%
TAGTATCATAGAACTGATAG+AGG - chr8_3:3242262-3242281 Msa1269890:intron 30.0%
AGTATCATAGAACTGATAGA+GGG - chr8_3:3242263-3242282 Msa1269890:intron 30.0%
! GTTTGAATGTTACTTCATGA+TGG - chr8_3:3242364-3242383 Msa1269890:intron 30.0%
TCAATTATGAATTCCTCTAG+AGG + chr8_3:3242432-3242451 None:intergenic 30.0%
TCTAGAGGAATTCATAATTG+AGG - chr8_3:3242431-3242450 Msa1269890:intron 30.0%
CTAGAGGAATTCATAATTGA+GGG - chr8_3:3242432-3242451 Msa1269890:intron 30.0%
!! AATAATAATGCTCGAGTTGA+TGG - chr8_3:3242654-3242673 Msa1269890:intron 30.0%
TAATCTTGACCATCAATGTA+TGG + chr8_3:3242921-3242940 None:intergenic 30.0%
! CAAAACAGTTGATTTCTATC+TGG - chr8_3:3242977-3242996 Msa1269890:intron 30.0%
! ACAAATTAGTTTCATCACCT+TGG - chr8_3:3243055-3243074 Msa1269890:intron 30.0%
CAGTTACTACAACTCAAATT+AGG - chr8_3:3243213-3243232 Msa1269890:intron 30.0%
GGAGAAAATATTACCGATAT+TGG - chr8_3:3243360-3243379 Msa1269890:intron 30.0%
GAAAATATTACCGATATTGG+TGG - chr8_3:3243363-3243382 Msa1269890:intron 30.0%
ACGTGTTTATTAAGTCTCTT+AGG - chr8_3:3243406-3243425 Msa1269890:five_prime_UTR 30.0%
!!! TTAGGTTTTGTTTGCAAGTT+TGG - chr8_3:3243424-3243443 Msa1269890:five_prime_UTR 30.0%
AATACAAAACCCTCATCATT+TGG - chr8_3:3243544-3243563 Msa1269890:intron 30.0%
ATACAAAACCCTCATCATTT+GGG - chr8_3:3243545-3243564 Msa1269890:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG - chr8_3:3243565-3243584 Msa1269890:intron 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr8_3:3243571-3243590 Msa1269890:intron 30.0%
CAAATAATTCAACGGTAGAT+TGG + chr8_3:3244008-3244027 None:intergenic 30.0%
CATTGCACCAATTCAAAATT+AGG + chr8_3:3244218-3244237 None:intergenic 30.0%
!! TATTTTGAACCTAGTGTGAA+CGG - chr8_3:3244343-3244362 Msa1269890:intron 30.0%
!! TTGCTAGTAATTTTGATCAG+TGG - chr8_3:3244426-3244445 Msa1269890:intron 30.0%
!! TGCTAGTAATTTTGATCAGT+GGG - chr8_3:3244427-3244446 Msa1269890:intron 30.0%
!!! AATCGTCATTTTTCCTGAAA+AGG + chr8_3:3244575-3244594 None:intergenic 30.0%
!!! ACTTTTGAGGTATATTGACA+AGG - chr8_3:3244624-3244643 Msa1269890:intron 30.0%
! TTGTATGCATAATCTAGAGT+TGG - chr8_3:3244754-3244773 Msa1269890:intron 30.0%
ATATCAGGTTATACTTTCAG+TGG - chr8_3:3244899-3244918 Msa1269890:intron 30.0%
AGTAAACTCGTATATTGCAT+GGG - chr8_3:3244926-3244945 Msa1269890:intron 30.0%
! TGGGATTTTTCTTTAGTACA+AGG - chr8_3:3244945-3244964 Msa1269890:intron 30.0%
AGTACAAGGCAAGATAAATA+TGG - chr8_3:3244959-3244978 Msa1269890:intron 30.0%
!!! TTTTTTTTGTGTGTGCGAAT+TGG - chr8_3:3245004-3245023 Msa1269890:intron 30.0%
AACAAAACATGATACAGAAC+TGG + chr8_3:3245267-3245286 None:intergenic 30.0%
ACCACCATGAGAATAAAAAA+TGG + chr8_3:3245312-3245331 None:intergenic 30.0%
TGGAAGCTATAAACTGATAT+GGG - chr8_3:3245499-3245518 Msa1269890:five_prime_UTR 30.0%
AATAGGAACATATGCTATGA+AGG + chr8_3:3245695-3245714 None:intergenic 30.0%
! CAATTGATTTCTATGAAGGA+AGG - chr8_3:3246089-3246108 Msa1269890:five_prime_UTR 30.0%
! AAAAGCCTTTTCGTATGAAA+TGG - chr8_3:3246325-3246344 Msa1269890:five_prime_UTR 30.0%
! AAAGCCTTTTCGTATGAAAT+GGG - chr8_3:3246326-3246345 Msa1269890:five_prime_UTR 30.0%
GATTGACTAATAACTGAGCA+TGG - chr8_3:3237999-3238018 Msa1269890:three_prime_UTR 35.0%
AAAGGAAGAGAATATTCGAG+AGG - chr8_3:3238044-3238063 Msa1269890:three_prime_UTR 35.0%
AAGGAAGAGAATATTCGAGA+GGG - chr8_3:3238045-3238064 Msa1269890:three_prime_UTR 35.0%
ATCATCAATTCCCAAATCAG+TGG + chr8_3:3238315-3238334 None:intergenic 35.0%
ATCAATCTTATGTGGAGGTT+GGG + chr8_3:3238354-3238373 None:intergenic 35.0%
TTTGAGCTTCCCAAGAATAA+CGG + chr8_3:3238582-3238601 None:intergenic 35.0%
GATTTGGAAAGATTCCAAAG+TGG + chr8_3:3238627-3238646 None:intergenic 35.0%
! TATCTACCACAAGATTTTCG+AGG - chr8_3:3238683-3238702 Msa1269890:intron 35.0%
! TCTTCTCTGGAAACAACAAA+TGG - chr8_3:3238805-3238824 Msa1269890:CDS 35.0%
TCTGGAAACAACAAATGGAA+AGG - chr8_3:3238810-3238829 Msa1269890:CDS 35.0%
AACAACAAATGGAAAGGAGA+AGG - chr8_3:3238816-3238835 Msa1269890:CDS 35.0%
TTCCTGAGGTATGTATCTAT+GGG - chr8_3:3238903-3238922 Msa1269890:intron 35.0%
AACTACTATGACGTCAAATG+TGG + chr8_3:3239339-3239358 None:intergenic 35.0%
GGGATATCATTAATGAGAAG+TGG + chr8_3:3239439-3239458 None:intergenic 35.0%
! ATTTAGTTTCAAGGCGCTAT+GGG + chr8_3:3239459-3239478 None:intergenic 35.0%
! TATTTAGTTTCAAGGCGCTA+TGG + chr8_3:3239460-3239479 None:intergenic 35.0%
AGCGCCTTGAAACTAAATAA+TGG - chr8_3:3239461-3239480 Msa1269890:intron 35.0%
CTTCAGATATTGCATTCTTC+AGG + chr8_3:3239618-3239637 None:intergenic 35.0%
TTTGAGCTGATTGTTTGTAG+AGG - chr8_3:3239849-3239868 Msa1269890:five_prime_UTR 35.0%
CGAAATGCTATGAAACTTTG+CGG + chr8_3:3239898-3239917 None:intergenic 35.0%
CCAGTGAGTATATGGTTATT+TGG + chr8_3:3239980-3239999 None:intergenic 35.0%
CCAAATAACCATATACTCAC+TGG - chr8_3:3239977-3239996 Msa1269890:intron 35.0%
AGCTATACTATGTAGGAACA+TGG + chr8_3:3240242-3240261 None:intergenic 35.0%
TACATAATGCAAGGGTTTGA+GGG + chr8_3:3240317-3240336 None:intergenic 35.0%
! ACTGTTTTGTCTTCTAGTAC+TGG - chr8_3:3240577-3240596 Msa1269890:intron 35.0%
TGTGTGTGAATAACAATCAC+AGG - chr8_3:3240772-3240791 Msa1269890:intron 35.0%
ACAGGATAACTCTTATCTAC+TGG - chr8_3:3240790-3240809 Msa1269890:intron 35.0%
GATAACTCTTATCTACTGGT+AGG - chr8_3:3240794-3240813 Msa1269890:intron 35.0%
!!! TTCAAATGAACGGTTTTAGG+GGG + chr8_3:3241144-3241163 None:intergenic 35.0%
TTATGTTTAGATGGAGGGTT+TGG + chr8_3:3241374-3241393 None:intergenic 35.0%
CTATGGTTATGTTTAGATGG+AGG + chr8_3:3241380-3241399 None:intergenic 35.0%
CTCCATCTAAACATAACCAT+AGG - chr8_3:3241378-3241397 Msa1269890:intron 35.0%
TCCCTATGGTTATGTTTAGA+TGG + chr8_3:3241383-3241402 None:intergenic 35.0%
ATCTAAACATAACCATAGGG+AGG - chr8_3:3241382-3241401 Msa1269890:intron 35.0%
TCTAAACATAACCATAGGGA+GGG - chr8_3:3241383-3241402 Msa1269890:intron 35.0%
TTATTAGGGAATGGGATGAA+TGG - chr8_3:3241420-3241439 Msa1269890:intron 35.0%
TCAAAATCTTCTCCCTGTAT+AGG - chr8_3:3241571-3241590 Msa1269890:intron 35.0%
CAAAATCTTCTCCCTGTATA+GGG - chr8_3:3241572-3241591 Msa1269890:intron 35.0%
!!! GAGGTATCCTTCACTTTTTT+TGG - chr8_3:3241633-3241652 Msa1269890:intron 35.0%
ATAAAATCTTACGCACAGTG+GGG - chr8_3:3241822-3241841 Msa1269890:intron 35.0%
AAACCAAATAGTTACCCCAA+TGG + chr8_3:3242066-3242085 None:intergenic 35.0%
ATTGGGGTAACTATTTGGTT+TGG - chr8_3:3242065-3242084 Msa1269890:intron 35.0%
! TTGGGGTAACTATTTGGTTT+GGG - chr8_3:3242066-3242085 Msa1269890:intron 35.0%
GGATGTTACATTCAACTAGT+TGG + chr8_3:3242166-3242185 None:intergenic 35.0%
CGAATCCAATCAATTAGTAG+TGG + chr8_3:3242187-3242206 None:intergenic 35.0%
CATGAAGTAACATTCAAACG+CGG + chr8_3:3242363-3242382 None:intergenic 35.0%
GTTTGATTCTATAGCAGTTG+TGG - chr8_3:3242464-3242483 Msa1269890:intron 35.0%
AGAGGTTCATCACATTTCTT+AGG - chr8_3:3242622-3242641 Msa1269890:intron 35.0%
! CAACTGTTTTGTGAGAGATA+AGG + chr8_3:3242968-3242987 None:intergenic 35.0%
AAGTAATATCAAGCGCAGTT+TGG - chr8_3:3243027-3243046 Msa1269890:intron 35.0%
!! CATCTCCTAATTTGAGTTGT+TGG - chr8_3:3243078-3243097 Msa1269890:intron 35.0%
TTGGCGGTAATTTGATCAAA+TGG - chr8_3:3243097-3243116 Msa1269890:intron 35.0%
TGACAATTTGTGAACTGACA+TGG - chr8_3:3243184-3243203 Msa1269890:intron 35.0%
ACTCAAATTAGGAGATGTCA+AGG - chr8_3:3243224-3243243 Msa1269890:intron 35.0%
GTTGAAAGCAATATGTAGCT+TGG + chr8_3:3243272-3243291 None:intergenic 35.0%
GAACTTTATCTCTCACAAAG+TGG + chr8_3:3243335-3243354 None:intergenic 35.0%
GTGAGAGATAAAGTTCTTTC+AGG - chr8_3:3243339-3243358 Msa1269890:intron 35.0%
!!! GTTTTGTTTGCAAGTTTGGT+GGG - chr8_3:3243428-3243447 Msa1269890:five_prime_UTR 35.0%
!! TTTTGTTTGCAAGTTTGGTG+GGG - chr8_3:3243429-3243448 Msa1269890:five_prime_UTR 35.0%
TAGATGATATTAAGAGGGGA+AGG - chr8_3:3243496-3243515 Msa1269890:five_prime_UTR 35.0%
TACAAAACCCTCATCATTTG+GGG - chr8_3:3243546-3243565 Msa1269890:intron 35.0%
! TTTAGTTCCCCAAATGATGA+GGG + chr8_3:3243556-3243575 None:intergenic 35.0%
!!! TTTTAGTTCCCCAAATGATG+AGG + chr8_3:3243557-3243576 None:intergenic 35.0%
GGGGAAAATATAGGGAAAAT+TGG + chr8_3:3243739-3243758 None:intergenic 35.0%
CAGCTTATGGGGAAAATATA+GGG + chr8_3:3243747-3243766 None:intergenic 35.0%
TAATGTAAGATCCAATGGTC+AGG - chr8_3:3243823-3243842 Msa1269890:intron 35.0%
AAAGAGTAAATCCTGACCAT+TGG + chr8_3:3243837-3243856 None:intergenic 35.0%
! AGTTGATATGCACTTTGTGT+GGG + chr8_3:3243892-3243911 None:intergenic 35.0%
TAATCCTCTTCTCTCATTTC+AGG + chr8_3:3243918-3243937 None:intergenic 35.0%
AGAGAAGAGGATTAACTGTA+TGG - chr8_3:3243924-3243943 Msa1269890:intron 35.0%
ATGGTCAGATTAACTCTTCA+TGG - chr8_3:3243943-3243962 Msa1269890:intron 35.0%
!! GCTAGTAATTTTGATCAGTG+GGG - chr8_3:3244428-3244447 Msa1269890:intron 35.0%
ATCTGACTCAGATGTATTTG+TGG - chr8_3:3244812-3244831 Msa1269890:intron 35.0%
CAGTAAACTCGTATATTGCA+TGG - chr8_3:3244925-3244944 Msa1269890:intron 35.0%
! GAGAACTTACAATCTTTTCC+CGG + chr8_3:3245118-3245137 None:intergenic 35.0%
ATGAAGATTGATAAGGCTTC+TGG + chr8_3:3245188-3245207 None:intergenic 35.0%
CATGATACAGAACTGGATAA+CGG + chr8_3:3245260-3245279 None:intergenic 35.0%
!!! GCCATTTTTTATTCTCATGG+TGG - chr8_3:3245308-3245327 Msa1269890:intron 35.0%
TTATTCTCATGGTGGTTGAT+TGG - chr8_3:3245316-3245335 Msa1269890:intron 35.0%
ACAAACATGACAGACTAACT+TGG + chr8_3:3245383-3245402 None:intergenic 35.0%
AATTTCTGCACATTAATGGC+TGG - chr8_3:3245479-3245498 Msa1269890:five_prime_UTR 35.0%
CTGGAAGCTATAAACTGATA+TGG - chr8_3:3245498-3245517 Msa1269890:five_prime_UTR 35.0%
TATTCAGTAATCAGTCCAAG+CGG + chr8_3:3245604-3245623 None:intergenic 35.0%
TCTCATTTGAAGGGTTAACT+TGG + chr8_3:3245771-3245790 None:intergenic 35.0%
AAGTTAACCCTTCAAATGAG+AGG - chr8_3:3245770-3245789 Msa1269890:five_prime_UTR 35.0%
TTCCCATTTGCATAGATCAT+TGG - chr8_3:3245817-3245836 Msa1269890:intron 35.0%
TATAATGACTGTAGGTGCTA+CGG - chr8_3:3245898-3245917 Msa1269890:five_prime_UTR 35.0%
! ACATTTTTGCATCAGTCGAA+TGG + chr8_3:3245963-3245982 None:intergenic 35.0%
TGATGCAAAAATGTCGTAGA+AGG - chr8_3:3245969-3245988 Msa1269890:five_prime_UTR 35.0%
GGCATGAGTAATTAGAACTT+CGG + chr8_3:3246053-3246072 None:intergenic 35.0%
AATTGAACACATCTCGATCT+TGG + chr8_3:3246074-3246093 None:intergenic 35.0%
ATTTCTATGAAGGAAGGGAT+AGG - chr8_3:3246095-3246114 Msa1269890:five_prime_UTR 35.0%
GTTCTTCATCAAGCAATATC+AGG + chr8_3:3246231-3246250 None:intergenic 35.0%
GATATTGCTTGATGAAGAAC+AGG - chr8_3:3246231-3246250 Msa1269890:five_prime_UTR 35.0%
TGATGAAGAACAGGATAGTA+AGG - chr8_3:3246240-3246259 Msa1269890:five_prime_UTR 35.0%
GGATAGTAAGGATAGTAAGA+AGG - chr8_3:3246252-3246271 Msa1269890:five_prime_UTR 35.0%
CAAAGAAAGATCACGAAGAA+TGG + chr8_3:3246292-3246311 None:intergenic 35.0%
! AAGCCTTTTCGTATGAAATG+GGG - chr8_3:3246327-3246346 Msa1269890:five_prime_UTR 35.0%
TTACCCCATTTCATACGAAA+AGG + chr8_3:3246333-3246352 None:intergenic 35.0%
GAAGAAGAAAAGAAAGGGAG+AGG - chr8_3:3238112-3238131 Msa1269890:three_prime_UTR 40.0%
AAGAAAAGAAAGGGAGAGGT+GGG - chr8_3:3238116-3238135 Msa1269890:three_prime_UTR 40.0%
TAGTACGAAGCAGAGAAGTA+AGG + chr8_3:3238289-3238308 None:intergenic 40.0%
! TCGTACTATGACCACTGATT+TGG - chr8_3:3238301-3238320 Msa1269890:three_prime_UTR 40.0%
!! CGTACTATGACCACTGATTT+GGG - chr8_3:3238302-3238321 Msa1269890:three_prime_UTR 40.0%
CATCAATCTTATGTGGAGGT+TGG + chr8_3:3238355-3238374 None:intergenic 40.0%
ACAATCTAATTGGCCAGACA+CGG - chr8_3:3238427-3238446 Msa1269890:intron 40.0%
AGAGTTCCTCGAAAATCTTG+TGG + chr8_3:3238692-3238711 None:intergenic 40.0%
GTGGATGCTTTGGTAAATTC+TGG - chr8_3:3238758-3238777 Msa1269890:intron 40.0%
! AGAGAAGAGCATATCGATCA+CGG + chr8_3:3238793-3238812 None:intergenic 40.0%
GTTCCTGAGGTATGTATCTA+TGG - chr8_3:3238902-3238921 Msa1269890:intron 40.0%
AACCCATAGATACATACCTC+AGG + chr8_3:3238908-3238927 None:intergenic 40.0%
TGGATTGTGGACAATGATGA+AGG + chr8_3:3239022-3239041 None:intergenic 40.0%
CATCTCAAAATCCGGATGAA+CGG - chr8_3:3239240-3239259 Msa1269890:intron 40.0%
AGTGGGATAAACAACTCCAT+AGG + chr8_3:3239421-3239440 None:intergenic 40.0%
TTCGTGGGTGAAGATTCTTA+TGG + chr8_3:3240043-3240062 None:intergenic 40.0%
!! CATGGAGTTTTTGTTGATGG+AGG + chr8_3:3240198-3240217 None:intergenic 40.0%
! CTAGGCTAGCTATACTATGT+AGG + chr8_3:3240249-3240268 None:intergenic 40.0%
CTACATAATGCAAGGGTTTG+AGG + chr8_3:3240318-3240337 None:intergenic 40.0%
AGGCAGATTAATGACGATGA+CGG - chr8_3:3240674-3240693 Msa1269890:intron 40.0%
ATTGAGGTGAGGCTGTATAA+TGG + chr8_3:3240853-3240872 None:intergenic 40.0%
CAGAAAGAATCATTGAGGTG+AGG + chr8_3:3240864-3240883 None:intergenic 40.0%
TCGGACAGAAAGAATCATTG+AGG + chr8_3:3240869-3240888 None:intergenic 40.0%
! ATCGTGCCCATGATAATGAA+AGG + chr8_3:3240897-3240916 None:intergenic 40.0%
! GTGAAGAGCAAGTTTTCTGT+TGG - chr8_3:3241040-3241059 Msa1269890:intron 40.0%
TGGGTAAAAAGTTGTGGAAC+CGG - chr8_3:3241168-3241187 Msa1269890:intron 40.0%
AGAAAAATAAGCCCTCCCTA+TGG + chr8_3:3241397-3241416 None:intergenic 40.0%
TGGGATGAATGGAAAGATAG+AGG - chr8_3:3241431-3241450 Msa1269890:intron 40.0%
!!! GAGGTATCCTTCACCTTTTT+TGG - chr8_3:3241450-3241469 Msa1269890:intron 40.0%
AAATAAGCCCTCCCTATACA+GGG + chr8_3:3241586-3241605 None:intergenic 40.0%
AAAATAAGCCCTCCCTATAC+AGG + chr8_3:3241587-3241606 None:intergenic 40.0%
ATTAAACCCCTCTCATATGG+TGG + chr8_3:3241789-3241808 None:intergenic 40.0%
TGGATTAAACCCCTCTCATA+TGG + chr8_3:3241792-3241811 None:intergenic 40.0%
TAAAATCTTACGCACAGTGG+GGG - chr8_3:3241823-3241842 Msa1269890:intron 40.0%
GACAAAGGAAGGAGTGAAAA+GGG + chr8_3:3241864-3241883 None:intergenic 40.0%
!!! AGTGTTTTGAGGACAAAGGA+AGG + chr8_3:3241875-3241894 None:intergenic 40.0%
CTACTTCTGCAAATGCCATT+GGG - chr8_3:3242048-3242067 Msa1269890:intron 40.0%
TACTTCTGCAAATGCCATTG+GGG - chr8_3:3242049-3242068 Msa1269890:intron 40.0%
ATGCCATTGGGGTAACTATT+TGG - chr8_3:3242060-3242079 Msa1269890:intron 40.0%
ATCATAGAACTGATAGAGGG+AGG - chr8_3:3242266-3242285 Msa1269890:intron 40.0%
TCATAGAACTGATAGAGGGA+GGG - chr8_3:3242267-3242286 Msa1269890:intron 40.0%
ACTTCATGATGGTACAGAAC+TGG - chr8_3:3242375-3242394 Msa1269890:intron 40.0%
CTTCATGATGGTACAGAACT+GGG - chr8_3:3242376-3242395 Msa1269890:intron 40.0%
AGCTGTTGATGTCTACACTA+TGG - chr8_3:3242593-3242612 Msa1269890:intron 40.0%
TCTACACTATGGAGTTTGAG+AGG - chr8_3:3242604-3242623 Msa1269890:intron 40.0%
ACCATGCAACCATACATTGA+TGG - chr8_3:3242909-3242928 Msa1269890:intron 40.0%
ACCATCAATGTATGGTTGCA+TGG + chr8_3:3242913-3242932 None:intergenic 40.0%
ACTCAAATTAGGAGATGCCA+AGG + chr8_3:3243075-3243094 None:intergenic 40.0%
!! CTCCTAATTTGAGTTGTTGG+CGG - chr8_3:3243081-3243100 Msa1269890:intron 40.0%
TACCGCCAACAACTCAAATT+AGG + chr8_3:3243086-3243105 None:intergenic 40.0%
!! AGCAGAGTATTGTGCTATTG+TGG - chr8_3:3243161-3243180 Msa1269890:intron 40.0%
CTTTATCTCTCACAAAGTGG+CGG + chr8_3:3243332-3243351 None:intergenic 40.0%
ATCATTGGAGCCACCAATAT+CGG + chr8_3:3243376-3243395 None:intergenic 40.0%
CACGTCAACCATTAGATCAT+TGG + chr8_3:3243391-3243410 None:intergenic 40.0%
!!! GGTTTTGTTTGCAAGTTTGG+TGG - chr8_3:3243427-3243446 Msa1269890:five_prime_UTR 40.0%
ATATTAAGAGGGGAAGGCTT+TGG - chr8_3:3243502-3243521 Msa1269890:intron 40.0%
TATTAAGAGGGGAAGGCTTT+GGG - chr8_3:3243503-3243522 Msa1269890:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr8_3:3243578-3243597 Msa1269890:intron 40.0%
CCAGCTTATGGGGAAAATAT+AGG + chr8_3:3243748-3243767 None:intergenic 40.0%
! CCTATATTTTCCCCATAAGC+TGG - chr8_3:3243745-3243764 Msa1269890:intron 40.0%
CTTGTTACAACCAGCTTATG+GGG + chr8_3:3243758-3243777 None:intergenic 40.0%
! GCTTGTTACAACCAGCTTAT+GGG + chr8_3:3243759-3243778 None:intergenic 40.0%
!! AGCTTGTTACAACCAGCTTA+TGG + chr8_3:3243760-3243779 None:intergenic 40.0%
TAAGCTGGTTGTAACAAGCT+TGG - chr8_3:3243760-3243779 Msa1269890:intron 40.0%
! CAGTTGATATGCACTTTGTG+TGG + chr8_3:3243893-3243912 None:intergenic 40.0%
AACAGATTTCCGTTCACACT+AGG + chr8_3:3244355-3244374 None:intergenic 40.0%
ACATCTGCTGGAATGAAGAA+AGG + chr8_3:3244468-3244487 None:intergenic 40.0%
AAAGAGATAAGTGTTCCAGC+TGG - chr8_3:3244597-3244616 Msa1269890:intron 40.0%
AAGAGATAAGTGTTCCAGCT+GGG - chr8_3:3244598-3244617 Msa1269890:intron 40.0%
! ACTTACAATCTTTTCCCGGT+AGG + chr8_3:3245114-3245133 None:intergenic 40.0%
ATGGGCGATGAAGATTGATA+AGG + chr8_3:3245195-3245214 None:intergenic 40.0%
!! AACTGGATAACGGAGAAGAA+GGG + chr8_3:3245250-3245269 None:intergenic 40.0%
TAACTTGGTCAGACTCGTAT+CGG + chr8_3:3245368-3245387 None:intergenic 40.0%
GCTTTACTAGACATCTGATG+TGG - chr8_3:3245415-3245434 Msa1269890:intron 40.0%
GGGGAATTTCTGCACATTAA+TGG - chr8_3:3245475-3245494 Msa1269890:five_prime_UTR 40.0%
AATTGTCTCATTATCCCGCT+TGG - chr8_3:3245586-3245605 Msa1269890:five_prime_UTR 40.0%
ATTCAGTAATCAGTCCAAGC+GGG + chr8_3:3245603-3245622 None:intergenic 40.0%
AGGAACATATGCTATGAAGG+TGG + chr8_3:3245692-3245711 None:intergenic 40.0%
ACCCTTCAAATGAGAGGAAA+AGG - chr8_3:3245776-3245795 Msa1269890:five_prime_UTR 40.0%
! GCCTTTTCCTCTCATTTGAA+GGG + chr8_3:3245780-3245799 None:intergenic 40.0%
! TGCCTTTTCCTCTCATTTGA+AGG + chr8_3:3245781-3245800 None:intergenic 40.0%
GGCCAATGATCTATGCAAAT+GGG + chr8_3:3245822-3245841 None:intergenic 40.0%
TGGCCAATGATCTATGCAAA+TGG + chr8_3:3245823-3245842 None:intergenic 40.0%
TTTGCATAGATCATTGGCCA+TGG - chr8_3:3245823-3245842 Msa1269890:intron 40.0%
TTTACAACATGCTGAGACCA+TGG + chr8_3:3245843-3245862 None:intergenic 40.0%
!! GGGTTTTATATTGTGGCTGT+AGG - chr8_3:3246173-3246192 Msa1269890:five_prime_UTR 40.0%
TAGGAAGCCAACTGTTGTAA+TGG - chr8_3:3246192-3246211 Msa1269890:five_prime_UTR 40.0%
ATTCGAGAGGGATCGATGAA+TGG - chr8_3:3238057-3238076 Msa1269890:three_prime_UTR 45.0%
TTCGAGAGGGATCGATGAAT+GGG - chr8_3:3238058-3238077 Msa1269890:three_prime_UTR 45.0%
GAAGAAAAGAAAGGGAGAGG+TGG - chr8_3:3238115-3238134 Msa1269890:three_prime_UTR 45.0%
GTTTGTCGTAGTAAGACGAC+AGG + chr8_3:3238229-3238248 None:intergenic 45.0%
CTGGATTACATTACCGTGTC+TGG + chr8_3:3238443-3238462 None:intergenic 45.0%
TCATCGCACTTTGACCACTT+TGG - chr8_3:3238610-3238629 Msa1269890:intron 45.0%
AGAGAGGAATAAGCAAGCAG+AGG - chr8_3:3238736-3238755 Msa1269890:intron 45.0%
GTGATCGATATGCTCTTCTC+TGG - chr8_3:3238792-3238811 Msa1269890:CDS 45.0%
AGAAGGCAATTAGCTCAGCT+TGG - chr8_3:3238833-3238852 Msa1269890:CDS 45.0%
! TCCAACAAGGTACTTGACGA+GGG + chr8_3:3238882-3238901 None:intergenic 45.0%
ATACCTCAGGAACTCCAACA+AGG + chr8_3:3238895-3238914 None:intergenic 45.0%
!! CGTTCATCCGGATTTTGAGA+TGG + chr8_3:3239242-3239261 None:intergenic 45.0%
! AGCTGGATTTTCCGTTCATC+CGG + chr8_3:3239254-3239273 None:intergenic 45.0%
TTGCGATTCATGTGCTTAGC+TGG + chr8_3:3239271-3239290 None:intergenic 45.0%
! GTGGACTATGTGACGTCAAA+TGG + chr8_3:3239320-3239339 None:intergenic 45.0%
TCAGGGCTGTAATGTAGCTA+AGG - chr8_3:3239365-3239384 Msa1269890:five_prime_UTR 45.0%
TCTCTTCATTCCTCCTTCCT+TGG - chr8_3:3240476-3240495 Msa1269890:intron 45.0%
GGCAGATTAATGACGATGAC+GGG - chr8_3:3240675-3240694 Msa1269890:intron 45.0%
TGTGAGTTACCTCGCATCTT+TGG - chr8_3:3240932-3240951 Msa1269890:intron 45.0%
! ATTTGAAGCAGATGGCATGC+TGG + chr8_3:3241119-3241138 None:intergenic 45.0%
CATTGGAACAAGTGAACTGC+CGG + chr8_3:3241200-3241219 None:intergenic 45.0%
TTTGGAGGGAGAGATGGTAA+GGG + chr8_3:3241356-3241375 None:intergenic 45.0%
GTTTAGATGGAGGGTTTGGA+GGG + chr8_3:3241370-3241389 None:intergenic 45.0%
TGTTTAGATGGAGGGTTTGG+AGG + chr8_3:3241371-3241390 None:intergenic 45.0%
AATCTTCTCCCTGTATAGGG+AGG - chr8_3:3241575-3241594 Msa1269890:intron 45.0%
ATCTTCTCCCTGTATAGGGA+GGG - chr8_3:3241576-3241595 Msa1269890:intron 45.0%
TTGGAGTTCCACCATATGAG+AGG - chr8_3:3241778-3241797 Msa1269890:intron 45.0%
TGGAGTTCCACCATATGAGA+GGG - chr8_3:3241779-3241798 Msa1269890:intron 45.0%
GGACAAAGGAAGGAGTGAAA+AGG + chr8_3:3241865-3241884 None:intergenic 45.0%
TTTGTGACTCAGTTGGGACA+TGG + chr8_3:3241903-3241922 None:intergenic 45.0%
TCCCAACTGAGTCACAAACA+CGG - chr8_3:3241905-3241924 Msa1269890:intron 45.0%
CCAATGGCATTTGCAGAAGT+AGG + chr8_3:3242050-3242069 None:intergenic 45.0%
CCTACTTCTGCAAATGCCAT+TGG - chr8_3:3242047-3242066 Msa1269890:intron 45.0%
TTGATTGGATTCGAGCTGTC+AGG - chr8_3:3242194-3242213 Msa1269890:intron 45.0%
TGGTGGCTCCAATGATCTAA+TGG - chr8_3:3243380-3243399 Msa1269890:intron 45.0%
! TTTGCAAGTTTGGTGGGGAA+GGG - chr8_3:3243434-3243453 Msa1269890:five_prime_UTR 45.0%
ATTAAGAGGGGAAGGCTTTG+GGG - chr8_3:3243504-3243523 Msa1269890:intron 45.0%
!!! TATTGGAGGAGGGTTTTGGA+TGG - chr8_3:3243582-3243601 Msa1269890:intron 45.0%
TGAGCCTGAAATGAGAGAAG+AGG - chr8_3:3243911-3243930 Msa1269890:intron 45.0%
TTCATTCCAGCAGATGTTGC+TGG - chr8_3:3244471-3244490 Msa1269890:intron 45.0%
TTGCTGGTGCAGTGGAAATA+AGG - chr8_3:3244487-3244506 Msa1269890:intron 45.0%
! TCCAGCTGGGAAAACTTTTG+AGG - chr8_3:3244611-3244630 Msa1269890:intron 45.0%
! ACCTCAAAAGTTTTCCCAGC+TGG + chr8_3:3244615-3244634 None:intergenic 45.0%
TGTCGCATGTTATGTGCAAC+AGG + chr8_3:3244721-3244740 None:intergenic 45.0%
TTGGAGTTTGCAAGTCCTAC+CGG - chr8_3:3245096-3245115 Msa1269890:intron 45.0%
!! GAACTGGATAACGGAGAAGA+AGG + chr8_3:3245251-3245270 None:intergenic 45.0%
! ACTGTAGGTGCTACGGTATA+AGG - chr8_3:3245905-3245924 Msa1269890:five_prime_UTR 45.0%
AGGTATCCTGCATAATGCAG+AGG + chr8_3:3245995-3246014 None:intergenic 45.0%
TCTATGAAGGAAGGGATAGG+AGG - chr8_3:3246098-3246117 Msa1269890:five_prime_UTR 45.0%
! ATAGGAGGTGTAAAGGAGCT+GGG - chr8_3:3246113-3246132 Msa1269890:five_prime_UTR 45.0%
!!! ATAACTTTTTAATAAATAAT+TGG - chr8_3:3244269-3244288 Msa1269890:intron 5.0%
TCGAGAGGGATCGATGAATG+GGG - chr8_3:3238059-3238078 Msa1269890:three_prime_UTR 50.0%
TCCTCTGATTCCGATTCCGA+TGG - chr8_3:3238163-3238182 Msa1269890:three_prime_UTR 50.0%
GTAGAAGCAGCCATCGGAAT+CGG + chr8_3:3238176-3238195 None:intergenic 50.0%
!! AGGGTTTGGTGCCCATAACT+AGG - chr8_3:3238198-3238217 Msa1269890:three_prime_UTR 50.0%
!! GGGTTTGGTGCCCATAACTA+GGG - chr8_3:3238199-3238218 Msa1269890:three_prime_UTR 50.0%
GACAGGAAGGCCCTAGTTAT+GGG + chr8_3:3238212-3238231 None:intergenic 50.0%
GTCGTAGTAAGACGACAGGA+AGG + chr8_3:3238225-3238244 None:intergenic 50.0%
GAGAAAGAGGAGGAGTGAAG+GGG + chr8_3:3238253-3238272 None:intergenic 50.0%
GGAGAAAGAGGAGGAGTGAA+GGG + chr8_3:3238254-3238273 None:intergenic 50.0%
TGGAGAAAGAGGAGGAGTGA+AGG + chr8_3:3238255-3238274 None:intergenic 50.0%
TGAGAGACGTCTGGAGAAAG+AGG + chr8_3:3238266-3238285 None:intergenic 50.0%
GAAGTAAGGTGAGAGACGTC+TGG + chr8_3:3238275-3238294 None:intergenic 50.0%
GAGGAATAAGCAAGCAGAGG+TGG - chr8_3:3238739-3238758 Msa1269890:intron 50.0%
ACCCTCGTCAAGTACCTTGT+TGG - chr8_3:3238878-3238897 Msa1269890:intron 50.0%
! CTCCAACAAGGTACTTGACG+AGG + chr8_3:3238883-3238902 None:intergenic 50.0%
GTACCTTGTTGGAGTTCCTG+AGG - chr8_3:3238889-3238908 Msa1269890:intron 50.0%
TATCAGCCTGCAGCATGCAA+AGG - chr8_3:3239395-3239414 Msa1269890:five_prime_UTR 50.0%
TCAACCTAACTCTGCTGCCA+AGG + chr8_3:3240496-3240515 None:intergenic 50.0%
CTTATCTACTGGTAGGCCCA+TGG - chr8_3:3240801-3240820 Msa1269890:intron 50.0%
GAGGTGAGGCTGTATAATGG+TGG + chr8_3:3240850-3240869 None:intergenic 50.0%
! AGGGGGCTATTTGAAGCAGA+TGG + chr8_3:3241127-3241146 None:intergenic 50.0%
GTTGTGGAACCGGACAAAAC+CGG - chr8_3:3241178-3241197 Msa1269890:intron 50.0%
!!! AGTGAACTGCCGGTTTTGTC+CGG + chr8_3:3241190-3241209 None:intergenic 50.0%
GTTTGGAGGGAGAGATGGTA+AGG + chr8_3:3241357-3241376 None:intergenic 50.0%
GGAGTTCCACCATATGAGAG+GGG - chr8_3:3241780-3241799 Msa1269890:intron 50.0%
!!! GGGGAGTGTTTTGAGGACAA+AGG + chr8_3:3241879-3241898 None:intergenic 50.0%
!!! ACATGGAGGGGAGTGTTTTG+AGG + chr8_3:3241886-3241905 None:intergenic 50.0%
TGACTCAGTTGGGACATGGA+GGG + chr8_3:3241899-3241918 None:intergenic 50.0%
GCCGTGTTTGTGACTCAGTT+GGG + chr8_3:3241909-3241928 None:intergenic 50.0%
GCACAAAGAGAGACGACAGA+GGG + chr8_3:3242528-3242547 None:intergenic 50.0%
TGCACAAAGAGAGACGACAG+AGG + chr8_3:3242529-3242548 None:intergenic 50.0%
AGGGGAACAGTTAGCTGTCT+TGG - chr8_3:3242566-3242585 Msa1269890:intron 50.0%
! GTTTGCAAGTTTGGTGGGGA+AGG - chr8_3:3243433-3243452 Msa1269890:five_prime_UTR 50.0%
GGGGAGGGGTTTGGAAAAAA+AGG - chr8_3:3243458-3243477 Msa1269890:five_prime_UTR 50.0%
! TTAAGAGGGGAAGGCTTTGG+GGG - chr8_3:3243505-3243524 Msa1269890:intron 50.0%
TGGAGTTTGCAAGTCCTACC+GGG - chr8_3:3245097-3245116 Msa1269890:intron 50.0%
TTGCATCAGTCGAATGGCAC+TGG + chr8_3:3245957-3245976 None:intergenic 50.0%
AGAAGGCCTCTGCATTATGC+AGG - chr8_3:3245986-3246005 Msa1269890:five_prime_UTR 50.0%
! GGAAGGGATAGGAGGTGTAA+AGG - chr8_3:3246106-3246125 Msa1269890:five_prime_UTR 50.0%
! GATAGGAGGTGTAAAGGAGC+TGG - chr8_3:3246112-3246131 Msa1269890:five_prime_UTR 50.0%
GCCATCGGAATCGGAATCAG+AGG + chr8_3:3238167-3238186 None:intergenic 55.0%
TCCGATGGCTGCTTCTACAG+AGG - chr8_3:3238178-3238197 Msa1269890:three_prime_UTR 55.0%
CCCTCTGTAGAAGCAGCCAT+CGG + chr8_3:3238182-3238201 None:intergenic 55.0%
CCGATGGCTGCTTCTACAGA+GGG - chr8_3:3238179-3238198 Msa1269890:three_prime_UTR 55.0%
GGCTGCTTCTACAGAGGGTT+TGG - chr8_3:3238184-3238203 Msa1269890:three_prime_UTR 55.0%
CGACAGGAAGGCCCTAGTTA+TGG + chr8_3:3238213-3238232 None:intergenic 55.0%
GAGACGTCTGGAGAAAGAGG+AGG + chr8_3:3238263-3238282 None:intergenic 55.0%
AGCGTTCGCGTTGTTGTCTG+AGG + chr8_3:3238715-3238734 None:intergenic 55.0%
AACAACGCGAACGCTCAGAG+AGG - chr8_3:3238720-3238739 Msa1269890:intron 55.0%
GCAAGCAGAGGTGGATGCTT+TGG - chr8_3:3238748-3238767 Msa1269890:intron 55.0%
CATAGGCCTTTGCATGCTGC+AGG + chr8_3:3239404-3239423 None:intergenic 55.0%
CTGCAGCATGCAAAGGCCTA+TGG - chr8_3:3239402-3239421 Msa1269890:five_prime_UTR 55.0%
AACTCTGCTGCCAAGGAAGG+AGG + chr8_3:3240489-3240508 None:intergenic 55.0%
CCTAACTCTGCTGCCAAGGA+AGG + chr8_3:3240492-3240511 None:intergenic 55.0%
CCTTCCTTGGCAGCAGAGTT+AGG - chr8_3:3240489-3240508 Msa1269890:intron 55.0%
ATCTACTGGTAGGCCCATGG+AGG - chr8_3:3240804-3240823 Msa1269890:intron 55.0%
!! GAGCTGGCTCGGTTTCGATT+TGG + chr8_3:3241083-3241102 None:intergenic 55.0%
AATCTTACGCACAGTGGGGG+TGG - chr8_3:3241826-3241845 Msa1269890:intron 55.0%
ATCTTACGCACAGTGGGGGT+GGG - chr8_3:3241827-3241846 Msa1269890:intron 55.0%
GACTCAGTTGGGACATGGAG+GGG + chr8_3:3241898-3241917 None:intergenic 55.0%
GTGACTCAGTTGGGACATGG+AGG + chr8_3:3241900-3241919 None:intergenic 55.0%
GGCCGTGTTTGTGACTCAGT+TGG + chr8_3:3241910-3241929 None:intergenic 55.0%
TGAGTCACAAACACGGCCCA+AGG - chr8_3:3241912-3241931 Msa1269890:intron 55.0%
GGATTCGAGCTGTCAGGTTC+AGG - chr8_3:3242200-3242219 Msa1269890:intron 55.0%
AGGCTGTGAGCAGACACACA+GGG + chr8_3:3242412-3242431 None:intergenic 55.0%
TGTCTGCTCACAGCCTCTAG+AGG - chr8_3:3242416-3242435 Msa1269890:intron 55.0%
! CAAGTTTGGTGGGGAAGGGA+GGG - chr8_3:3243438-3243457 Msa1269890:five_prime_UTR 55.0%
! AAGTTTGGTGGGGAAGGGAG+GGG - chr8_3:3243439-3243458 Msa1269890:five_prime_UTR 55.0%
!! TAAGAGGGGAAGGCTTTGGG+GGG - chr8_3:3243506-3243525 Msa1269890:intron 55.0%
ACTGCACCAGCAACATCTGC+TGG + chr8_3:3244480-3244499 None:intergenic 55.0%
AGCAGATGTTGCTGGTGCAG+TGG - chr8_3:3244479-3244498 Msa1269890:intron 55.0%
! TCAGACTCGTATCGGCGGTA+AGG + chr8_3:3245360-3245379 None:intergenic 55.0%
CTTGGTCAGACTCGTATCGG+CGG + chr8_3:3245365-3245384 None:intergenic 55.0%
!! AATGGCACTGGCTCTGCAAC+AGG + chr8_3:3245945-3245964 None:intergenic 55.0%
!! GCTCAGCTTGGCTCTGCAAC+AGG - chr8_3:3238845-3238864 Msa1269890:intron 60.0%
CGATGACGCTGCTCCTCCAT+GGG + chr8_3:3240820-3240839 None:intergenic 60.0%
GAGGAGCAGCGTCATCGCTA+TGG - chr8_3:3240823-3240842 Msa1269890:intron 60.0%
TCGAAACCGAGCCAGCTCGT+TGG - chr8_3:3241085-3241104 Msa1269890:intron 60.0%
TGGTTCCTGGTCCAACGAGC+TGG + chr8_3:3241099-3241118 None:intergenic 60.0%
!! GCAGATGGCATGCTGGTTCC+TGG + chr8_3:3241112-3241131 None:intergenic 60.0%
GGAGGGTTTGGAGGGAGAGA+TGG + chr8_3:3241362-3241381 None:intergenic 60.0%
TCTTACGCACAGTGGGGGTG+GGG - chr8_3:3241828-3241847 Msa1269890:intron 60.0%
GAGGCTGTGAGCAGACACAC+AGG + chr8_3:3242413-3242432 None:intergenic 60.0%
! GCAAGTTTGGTGGGGAAGGG+AGG - chr8_3:3243437-3243456 Msa1269890:five_prime_UTR 60.0%
GCGATGACGCTGCTCCTCCA+TGG + chr8_3:3240821-3240840 None:intergenic 65.0%
CCTGGTCCAACGAGCTGGCT+CGG + chr8_3:3241094-3241113 None:intergenic 65.0%
CTTACGCACAGTGGGGGTGG+GGG - chr8_3:3241829-3241848 Msa1269890:intron 65.0%
TTACGCACAGTGGGGGTGGG+GGG - chr8_3:3241830-3241849 Msa1269890:intron 65.0%
TTTGGTGGGGAAGGGAGGGG+AGG - chr8_3:3243442-3243461 Msa1269890:five_prime_UTR 65.0%
TTGGTGGGGAAGGGAGGGGA+GGG - chr8_3:3243443-3243462 Msa1269890:five_prime_UTR 65.0%
!! GGCACTGGCTCTGCAACAGG+AGG + chr8_3:3245942-3245961 None:intergenic 65.0%
CCGAGCCAGCTCGTTGGACC+AGG - chr8_3:3241091-3241110 Msa1269890:intron 70.0%
TACGCACAGTGGGGGTGGGG+GGG - chr8_3:3241831-3241850 Msa1269890:intron 70.0%
TGGTGGGGAAGGGAGGGGAG+GGG - chr8_3:3243444-3243463 Msa1269890:five_prime_UTR 70.0%
GGGAAGGGAGGGGAGGGGTT+TGG - chr8_3:3243449-3243468 Msa1269890:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 3237958 3246377 3237958 ID=Msa1269890;Name=Msa1269890
chr8_3 mRNA 3237958 3246377 3237958 ID=Msa1269890-mRNA-1;Parent=Msa1269890;Name=Msa1269890-mRNA-1;_AED=0.24;_eAED=0.24;_QI=1508|1|1|1|0.8|0.72|11|406|73
chr8_3 exon 3237958 3238423 3237958 ID=Msa1269890-mRNA-1:exon:1053;Parent=Msa1269890-mRNA-1
chr8_3 exon 3238785 3238859 3238785 ID=Msa1269890-mRNA-1:exon:1052;Parent=Msa1269890-mRNA-1
chr8_3 exon 3238952 3239254 3238952 ID=Msa1269890-mRNA-1:exon:1051;Parent=Msa1269890-mRNA-1
chr8_3 exon 3239355 3239429 3239355 ID=Msa1269890-mRNA-1:exon:1050;Parent=Msa1269890-mRNA-1
chr8_3 exon 3239703 3239754 3239703 ID=Msa1269890-mRNA-1:exon:1049;Parent=Msa1269890-mRNA-1
chr8_3 exon 3239827 3239889 3239827 ID=Msa1269890-mRNA-1:exon:1048;Parent=Msa1269890-mRNA-1
chr8_3 exon 3241692 3241772 3241692 ID=Msa1269890-mRNA-1:exon:1047;Parent=Msa1269890-mRNA-1
chr8_3 exon 3243403 3243519 3243403 ID=Msa1269890-mRNA-1:exon:1046;Parent=Msa1269890-mRNA-1
chr8_3 exon 3243639 3243679 3243639 ID=Msa1269890-mRNA-1:exon:1045;Parent=Msa1269890-mRNA-1
chr8_3 exon 3245425 3245796 3245425 ID=Msa1269890-mRNA-1:exon:1044;Parent=Msa1269890-mRNA-1
chr8_3 exon 3245887 3246377 3245887 ID=Msa1269890-mRNA-1:exon:1043;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3245887 3246377 3245887 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3245425 3245796 3245425 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3243639 3243679 3243639 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3243403 3243519 3243403 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3241692 3241772 3241692 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3239827 3239889 3239827 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3239703 3239754 3239703 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3239355 3239429 3239355 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 five_prime_UTR 3239039 3239254 3239039 ID=Msa1269890-mRNA-1:five_prime_utr;Parent=Msa1269890-mRNA-1
chr8_3 CDS 3238952 3239038 3238952 ID=Msa1269890-mRNA-1:cds;Parent=Msa1269890-mRNA-1
chr8_3 CDS 3238785 3238859 3238785 ID=Msa1269890-mRNA-1:cds;Parent=Msa1269890-mRNA-1
chr8_3 CDS 3238364 3238423 3238364 ID=Msa1269890-mRNA-1:cds;Parent=Msa1269890-mRNA-1
chr8_3 three_prime_UTR 3237958 3238363 3237958 ID=Msa1269890-mRNA-1:three_prime_utr;Parent=Msa1269890-mRNA-1
Gene Sequence

>Msa1269890

ATGTTTGTTTTGCCATTTTTTATTCTCATGGTGGTTGATTGGTTCACACAGCTGATGTTGCCTTACCGCCGATACGAGTCTGACCAAGGGAATTTCTGCACATTAATGGCTGGAAGCTATAAACTGATATGGGACAACACACATTCAACTTTTTTTAGAAAGGTGCTACGGTATAAGGTAGATTGTATACCTCCTGTTGCAGAGCCAGTGCCATTCGACTGA

Protein sequence

>Msa1269890

MFVLPFFILMVVDWFTQLMLPYRRYESDQGNFCTLMAGSYKLIWDNTHSTFFRKVLRYKVDCIPPVAEPVPFD*