AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0468800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0468800 MtrunA17_Chr3g0123171 94.731 1822 96 0 1 1822 1 1822 0.0 3412
Msa0468800 MtrunA17_Chr4g0002891 93.907 279 17 0 1021 1299 2 280 1.89e-170 518
Msa0468800 MtrunA17_Chr1g0147851 27.957 465 276 16 1389 1817 2390 2831 1.70e-22 106
Msa0468800 MtrunA17_Chr1g0147851 34.524 168 89 4 267 415 1329 1494 1.91e-12 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0468800 AT1G24460.1 38.816 1064 584 9 806 1809 738 1794 0.0 640
Msa0468800 AT1G24460.1 32.298 1127 531 33 50 1028 39 1081 2.98e-102 365
Msa0468800 AT1G24460.2 38.960 1019 570 7 806 1809 738 1719 0.0 623
Msa0468800 AT1G24460.2 32.298 1127 531 33 50 1028 39 1081 2.73e-102 365
Msa0468800 AT4G31570.6 24.390 779 479 28 1086 1822 1772 2482 2.26e-24 112
Msa0468800 AT4G31570.4 24.390 779 479 28 1086 1822 2008 2718 5.55e-24 111
Msa0468800 AT4G31570.2 24.519 779 478 28 1086 1822 2013 2723 5.60e-24 111
Msa0468800 AT4G31570.3 24.390 779 479 28 1086 1822 1976 2686 5.77e-24 111
Msa0468800 AT4G31570.5 31.273 275 144 10 167 419 1228 1479 9.96e-14 77.8
Msa0468800 AT4G31570.5 23.828 789 478 32 1086 1822 2008 2725 1.89e-12 73.6
Msa0468800 AT4G31570.1 31.273 275 144 10 167 419 1233 1484 1.08e-13 77.8
Msa0468800 AT4G31570.1 23.701 789 479 32 1086 1822 2013 2730 1.97e-12 73.6
Msa0468800 AT4G31570.7 31.273 275 144 10 167 419 1233 1484 1.08e-13 77.8
Msa0468800 AT4G31570.7 23.701 789 479 32 1086 1822 2013 2730 1.97e-12 73.6

Find 340 sgRNAs with CRISPR-Local

Find 493 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCTTTCCTGGACAATTTC+TGG 0.043614 3_3:+70493471 None:intergenic
CTACATTTGTTTCAAATTTA+AGG 0.077837 3_3:-70491717 Msa0468800:three_prime_UTR
TTCAACTTCTAGATCCTTTA+TGG 0.113061 3_3:+70495787 None:intergenic
ATTTGCTAATCATGCATTTA+TGG 0.133581 3_3:-70492021 Msa0468800:CDS
AGATTCATTCGATTCAATTT+TGG 0.166274 3_3:-70499253 Msa0468800:five_prime_UTR
CGTGGGAGCTTACAGTTTCT+TGG 0.179361 3_3:+70496110 None:intergenic
TCACTTATCGGAGCAGATTT+TGG 0.199242 3_3:-70499111 Msa0468800:CDS
GATACTAATGAGCAGGAATT+TGG 0.210844 3_3:-70498242 Msa0468800:CDS
TTTGTTGTAGTGAAGTATTC+AGG 0.214106 3_3:+70497817 None:intergenic
TCAGGCAAATCAAGCATTTC+AGG 0.215642 3_3:+70497738 None:intergenic
CATCAACAACAGAGTCATTT+TGG 0.215669 3_3:-70498766 Msa0468800:CDS
AGCCAAGTTGCCCAAGATTT+TGG 0.226321 3_3:+70494563 None:intergenic
CTTTCCAAATGATGAAATTA+TGG 0.232707 3_3:+70494870 None:intergenic
CTACATGTATCTTAGCTTCT+TGG 0.238921 3_3:+70496194 None:intergenic
AACTAAGGCCCTTGAAATTA+AGG 0.249907 3_3:-70493823 Msa0468800:CDS
AAAGCTAGAGGCTGATCTTT+TGG 0.252539 3_3:-70496380 Msa0468800:CDS
TTCAAGTCTCTGAACACTTC+TGG 0.255648 3_3:-70492745 Msa0468800:CDS
CAATAGATTGTCCATTGATT+TGG 0.264069 3_3:-70496827 Msa0468800:CDS
CAAGAACCGTCAGATTTCTT+TGG 0.267609 3_3:-70497388 Msa0468800:CDS
TCCCTGTCCGCTAAGGATTC+TGG 0.271222 3_3:-70495311 Msa0468800:CDS
AACTGTTGTTTCGTTCAATT+TGG 0.283807 3_3:+70494360 None:intergenic
CAATAGATTGTCCAGTGATT+TGG 0.290068 3_3:-70496413 Msa0468800:CDS
TTCAAAGTCTTCTGTATGTT+AGG 0.307186 3_3:-70497185 Msa0468800:CDS
TAAACTGCAGGGTGCCTTCC+TGG 0.307323 3_3:-70497685 Msa0468800:CDS
CCTTAGCGGACAGGGAAATA+TGG 0.308278 3_3:+70495318 None:intergenic
TTCATTCGGATCTGCAGTTT+CGG 0.309318 3_3:+70499179 None:intergenic
CTTTCTGATATTTATCAACT+TGG 0.311795 3_3:-70498290 Msa0468800:CDS
CAATGAGATCCACATTCTTC+AGG 0.313889 3_3:+70495357 None:intergenic
ACAGATTTGAGGTTCGAATA+TGG 0.314785 3_3:-70497423 Msa0468800:CDS
GGATGTGGTAGGTAGGAAAT+AGG 0.318497 3_3:-70491695 Msa0468800:three_prime_UTR
ATTCGATTCAATGCTTATAT+AGG 0.320108 3_3:-70499230 Msa0468800:five_prime_UTR
TGGTGCTCGTGGTGGGTTGC+TGG 0.321090 3_3:-70498207 Msa0468800:CDS
TGATCTAAAAGATGAAGTTT+TGG 0.322323 3_3:-70498926 Msa0468800:CDS
AGAAAGTTGATAAATGCTTC+TGG 0.322654 3_3:-70494457 Msa0468800:CDS
TGCAAATAAAATTGCCAAAC+AGG 0.323444 3_3:-70495558 Msa0468800:CDS
TACATTTGTTTCAAATTTAA+GGG 0.324858 3_3:-70491716 Msa0468800:three_prime_UTR
TGGATTCCTTAACGATCTTC+AGG 0.326775 3_3:-70495444 Msa0468800:CDS
CTTCATATATGCTCCTTTCC+TGG 0.327010 3_3:+70493460 None:intergenic
GAAATGCTTAATTGAATTGC+AGG 0.329134 3_3:-70497913 Msa0468800:CDS
TGAACCCTTTCAAACAATTC+GGG 0.337019 3_3:+70497204 None:intergenic
CTGGACAACAGAGAGATTAA+TGG 0.339545 3_3:-70494907 Msa0468800:CDS
TTGAACCCTTTCAAACAATT+CGG 0.341200 3_3:+70497203 None:intergenic
CTATCTTCAGATTCTACAAT+AGG 0.342695 3_3:+70493969 None:intergenic
CCGAGTTTCGTCGTCAAAAC+AGG 0.344427 3_3:-70499374 None:intergenic
ATCTGAAAATTCAAAATCTA+AGG 0.345380 3_3:-70493598 Msa0468800:CDS
GACACCATAATTTCATCATT+TGG 0.345577 3_3:-70494874 Msa0468800:CDS
AGCCATACTAAGTTTCTCTT+TGG 0.347518 3_3:+70498013 None:intergenic
CCATTGATTTGGAAAGAGAT+AGG 0.347992 3_3:-70496816 Msa0468800:CDS
CAGTATACTTGAAGCTAAAT+TGG 0.349266 3_3:-70496140 Msa0468800:CDS
CAAGATAGGGACAATCTAAA+AGG 0.353839 3_3:-70496940 Msa0468800:CDS
CCTTCACTTTGCGTAATTCC+AGG 0.354937 3_3:+70497667 None:intergenic
GACCATCTTGCTCTTGATAT+TGG 0.357783 3_3:-70492901 Msa0468800:CDS
AGAAGGCGAAAATCAGAAAT+TGG 0.359711 3_3:-70498138 Msa0468800:CDS
CAATTTAGCTTCAAGTATAC+TGG 0.360809 3_3:+70496141 None:intergenic
TTCATTGCTTGAGATAGAAA+TGG 0.362169 3_3:+70491612 None:intergenic
CTACTTGTTCATCTGCTTTG+TGG 0.364234 3_3:+70494515 None:intergenic
TTGAAGATTCGATTCAAGAT+AGG 0.364500 3_3:-70493503 Msa0468800:CDS
CTCATTGCAGATCGTATTGA+TGG 0.368014 3_3:-70492700 Msa0468800:CDS
TAGAGAATTATTGCCGCAAT+TGG 0.369179 3_3:-70493649 Msa0468800:CDS
TGTAGAATCTGAAGATAGTA+TGG 0.370165 3_3:-70493964 Msa0468800:CDS
GAAAGGGATTGGTTCAAGAT+AGG 0.373460 3_3:-70496954 Msa0468800:CDS
CTCAGAGATTGAGCAGTTGC+AGG 0.374018 3_3:-70496899 Msa0468800:CDS
GGGCCTCGGATGAAGCTTGC+AGG 0.376584 3_3:+70498474 None:intergenic
AAAAGATCAGCCTCTAGCTT+TGG 0.376616 3_3:+70496382 None:intergenic
CACCAAAATCTTGGGCAACT+TGG 0.376667 3_3:-70494565 Msa0468800:CDS
GTCTGAGAATAATCACTTAT+CGG 0.378869 3_3:-70499123 Msa0468800:CDS
GTTGGCCCAGAGTGAAAATA+TGG 0.385392 3_3:-70497847 Msa0468800:CDS
ATCTGAGATGAAGGAAATAA+AGG 0.386056 3_3:+70499272 None:intergenic
CTAATGATTCGGAAAGAGAT+AGG 0.387186 3_3:-70496540 Msa0468800:CDS
CCTTTAGATCCTTAATTTCA+AGG 0.387785 3_3:+70493814 None:intergenic
AATCATGCATTTATGGCTAC+TGG 0.389563 3_3:-70492014 Msa0468800:CDS
GATTCGGATTCTCAATCAAA+TGG 0.390543 3_3:-70499089 Msa0468800:CDS
GGAGAAGACTGGCATGCTTC+GGG 0.390644 3_3:-70497004 Msa0468800:CDS
TGTAGGGCAAATACAATGTA+AGG 0.390808 3_3:+70491735 None:intergenic
TACCAAAGAGAAACTTAGTA+TGG 0.390919 3_3:-70498015 Msa0468800:CDS
AAGGAAGTTCACCAAAATCT+TGG 0.391707 3_3:-70494574 Msa0468800:CDS
TCAAGTTGTCAAGACTGAAT+TGG 0.392813 3_3:-70495711 Msa0468800:CDS
GAACTTGGTATTAAATTAGT+TGG 0.393993 3_3:-70493570 Msa0468800:CDS
AAATGCATGCACTGAGCTTA+AGG 0.394839 3_3:-70494257 Msa0468800:CDS
TAGATCAGATGTGAATAAAC+TGG 0.396938 3_3:-70497112 Msa0468800:CDS
TCAGTTTGAACAGTTCTTGA+TGG 0.400931 3_3:-70496338 Msa0468800:CDS
TTTAGCTTCTCAACCTCAAA+AGG 0.401079 3_3:+70494538 None:intergenic
TCTTCTCCTCTGATCGTTCA+AGG 0.402713 3_3:+70497019 None:intergenic
CTTAAATTTGAAACAAATGT+AGG 0.403205 3_3:+70491718 None:intergenic
GTGGGAGCTTACAGTTTCTT+GGG 0.403953 3_3:+70496111 None:intergenic
CTTGCAAGTGTTGTTAATCA+AGG 0.404165 3_3:-70498398 Msa0468800:CDS
AAGTGTTGTGAATGAATATC+AGG 0.406781 3_3:-70498668 Msa0468800:intron
AGGAGAAGACTGGCATGCTT+CGG 0.407170 3_3:-70497005 Msa0468800:CDS
TCTTCTGTATGTTAGGGATC+AGG 0.407214 3_3:-70497178 Msa0468800:CDS
AGTCTGAATTAACAGATTTG+AGG 0.408292 3_3:-70497434 Msa0468800:CDS
CCAGTGATTCGGAAAGAGAT+AGG 0.408718 3_3:-70496678 Msa0468800:CDS
ATATCTTTGACGAGATAGAT+AGG 0.410878 3_3:-70494001 Msa0468800:CDS
GGAAACAGAGTCTAATATAA+TGG 0.412356 3_3:-70494743 Msa0468800:CDS
CTAATTTAATACCAAGTTCA+TGG 0.413695 3_3:+70493574 None:intergenic
GAATTTGGAAACATACTTGT+TGG 0.415503 3_3:-70498227 Msa0468800:CDS
ATAAGTATCAATGTTTGATT+CGG 0.415505 3_3:+70499058 None:intergenic
TCCATGGAGAGGAGAAATAA+AGG 0.417324 3_3:+70494774 None:intergenic
GCAATGAGCTTTCCTTGCTT+CGG 0.419441 3_3:+70492715 None:intergenic
GAGCGAAGATATCTCCTGTT+TGG 0.420870 3_3:+70495544 None:intergenic
TCCTCTCCATGGAAAACTAC+TGG 0.424534 3_3:-70494764 Msa0468800:CDS
AAACCTCTACGAGGATATAC+TGG 0.426327 3_3:-70497151 Msa0468800:CDS
TCGAACGTGATTAGCTCGTC+GGG 0.426509 3_3:+70498853 None:intergenic
TCTATCTACAACCCAGTTGT+TGG 0.426806 3_3:+70493686 None:intergenic
TATCTTCAGATTCTACAATA+GGG 0.427093 3_3:+70493970 None:intergenic
TAGATCCTTTATGGTACTGC+TGG 0.427788 3_3:+70495796 None:intergenic
CATTGATACTTATCAAAATC+AGG 0.429082 3_3:-70499048 Msa0468800:intron
ATCTAGAATCACAAATGAAC+TGG 0.433136 3_3:-70497599 Msa0468800:CDS
TTCTCAACTTGCTGAAGAAA+AGG 0.433933 3_3:-70496056 Msa0468800:CDS
GAAAAGGTGAAATGGCTTGC+TGG 0.434698 3_3:-70496232 Msa0468800:CDS
CATTTCAGGCTGATCAAGTT+CGG 0.436337 3_3:+70497752 None:intergenic
CTCAGAGATTGAGCAGTTGA+AGG 0.437318 3_3:-70496485 Msa0468800:CDS
CTCAGAGATTGAGCAGTTGA+AGG 0.437318 3_3:-70496761 Msa0468800:CDS
TTGTTGTAGTGAAGTATTCA+GGG 0.439329 3_3:+70497818 None:intergenic
TCTAGATCAGATGATGAAAC+AGG 0.439352 3_3:+70497615 None:intergenic
TTCGAATATGGAGAACTTGT+TGG 0.441249 3_3:-70497411 Msa0468800:CDS
GAATTGAATAATGGCGTAGC+GGG 0.442047 3_3:-70498742 Msa0468800:CDS
GTCATTCTCTGAGGTTGGCT+TGG 0.443846 3_3:-70498264 Msa0468800:CDS
CAATAGATTGTCCAGTGATT+CGG 0.444503 3_3:-70496689 Msa0468800:CDS
AAATCTAAGGCCCATGAACT+TGG 0.444688 3_3:-70493585 Msa0468800:CDS
TGGAATGCTTTCCAAATCAC+TGG 0.445821 3_3:+70496402 None:intergenic
GGACAGTCATTCTCTGAGGT+TGG 0.446660 3_3:-70498269 Msa0468800:CDS
AAATTGTGCTCTAAACAATC+TGG 0.447715 3_3:-70491975 Msa0468800:three_prime_UTR
TAGAGCATAAATATCATTGC+GGG 0.448297 3_3:+70497554 None:intergenic
CAATGATATTTATGCTCTAC+AGG 0.448544 3_3:-70497550 Msa0468800:CDS
CAATAGATTGTCTAATGATT+CGG 0.449960 3_3:-70496551 Msa0468800:CDS
CAAATACTCACTCCTTCATT+CGG 0.450203 3_3:+70499165 None:intergenic
AATGAGTCCTAATCTTGCTC+TGG 0.450217 3_3:+70492048 None:intergenic
ATCAATGCACAGTGCTTCGT+TGG 0.452014 3_3:-70494173 Msa0468800:CDS
CCTATCTCTTTCCAAATCAA+TGG 0.454507 3_3:+70496816 None:intergenic
TTCAATGGCTTGTGGATGAC+AGG 0.454605 3_3:-70497710 Msa0468800:CDS
GAAGGAATCTCTATCTCTAC+TGG 0.455402 3_3:-70497649 Msa0468800:CDS
GGAACAGTTGCGGGTGAAGT+TGG 0.455421 3_3:-70498713 Msa0468800:CDS
ACTATCTCAGGTTGAGAGTA+AGG 0.456319 3_3:-70495765 Msa0468800:CDS
GAAAAGCTGTCTCATGTAGA+AGG 0.456481 3_3:-70498155 Msa0468800:CDS
AGAGGCCAGCAGTACCATAA+AGG 0.457352 3_3:-70495801 Msa0468800:CDS
TGCGCATTAATCACTTTGCT+TGG 0.457559 3_3:-70499351 Msa0468800:five_prime_UTR
TTATGCAGGGTATCCGGTAG+TGG 0.458265 3_3:-70492088 Msa0468800:intron
CAGATCGTATTGATGGAATC+TGG 0.458759 3_3:-70492693 Msa0468800:intron
ATTCGGATTCTCAATCAAAT+GGG 0.463090 3_3:-70499088 Msa0468800:CDS
AACCTATGGAAAAGGTGAAA+TGG 0.463734 3_3:-70496240 Msa0468800:CDS
GACAAAGTTGAACGAAGAAA+AGG 0.464880 3_3:-70494674 Msa0468800:CDS
ACATTATTGATAGTGTTACT+AGG 0.466598 3_3:-70493905 Msa0468800:CDS
GCAAAGATTATCTTCTTCAG+AGG 0.468388 3_3:-70496086 Msa0468800:CDS
GCTGATACCGATGATGATAA+AGG 0.468466 3_3:-70492850 Msa0468800:intron
CTCCAGAATCCTTAGCGGAC+AGG 0.469222 3_3:+70495309 None:intergenic
TTTCAAGGGCCTTAGTTTCG+AGG 0.471347 3_3:+70493829 None:intergenic
TCTAGAAGTTGAACTATCTC+AGG 0.471449 3_3:-70495777 Msa0468800:CDS
TTATGTACACAGGGATCTCT+TGG 0.471832 3_3:-70492988 Msa0468800:intron
CTCTGAAACTATCAAATCAC+TGG 0.472440 3_3:-70495627 Msa0468800:CDS
GCCTTTATTTCTCCTCTCCA+TGG 0.472775 3_3:-70494775 Msa0468800:CDS
TCAAAGTCTTCTGTATGTTA+GGG 0.472817 3_3:-70497184 Msa0468800:CDS
TGATTGCAGAGAACTATTAG+AGG 0.473469 3_3:+70491841 None:intergenic
TCATTGCTTGAGATAGAAAT+GGG 0.473924 3_3:+70491613 None:intergenic
ACATTATAATTTGCAGATGC+AGG 0.474167 3_3:+70491934 None:intergenic
ACTGATATCGTTCTCTAAAG+TGG 0.476120 3_3:+70494639 None:intergenic
ATCCGAGGCCCAACATGAAA+AGG 0.477333 3_3:-70498462 Msa0468800:CDS
CACGTTCGACGGTAAGCAAA+AGG 0.478122 3_3:-70498839 Msa0468800:CDS
CTCTTCAACTTCAGTTATCT+CGG 0.478217 3_3:+70493416 None:intergenic
GCAATCAATCCTCGAAACTA+AGG 0.479936 3_3:-70493838 Msa0468800:CDS
CAAATGATCAATACAGTTGA+CGG 0.479954 3_3:+70497500 None:intergenic
AGGAAGTTCACCAAAATCTT+GGG 0.480286 3_3:-70494573 Msa0468800:CDS
CTTTCCTTTCTTAACTGCCA+TGG 0.480413 3_3:+70496972 None:intergenic
CTTAGTATGGCTGTGACAAA+AGG 0.481414 3_3:-70498002 Msa0468800:CDS
ATTTGCCTGAGAGACTTCAA+TGG 0.482161 3_3:-70497725 Msa0468800:CDS
AACAAATCTCTAGAGCTCAT+TGG 0.483447 3_3:-70495464 Msa0468800:CDS
ATTTCTTTATGCAGGGTATC+CGG 0.484379 3_3:-70492094 Msa0468800:intron
CTCAGAGATCGATCAGTTGA+AGG 0.486181 3_3:-70496623 Msa0468800:CDS
AGAGCAAGATTAGGACTCAT+TGG 0.489514 3_3:-70492046 Msa0468800:CDS
TGAAGCTTGCAGGATCTCAT+TGG 0.489946 3_3:+70498484 None:intergenic
TAAGCATTTCTCAAGCTCAC+TGG 0.491182 3_3:+70497926 None:intergenic
CGAGGAGAAAGAGCAGGCTC+AGG 0.493694 3_3:-70495897 Msa0468800:CDS
AATCGTCCCAGAGCAAGATT+AGG 0.494079 3_3:-70492055 Msa0468800:CDS
AATGAGATCCACATTCTTCA+GGG 0.494140 3_3:+70495358 None:intergenic
TGACCCCGAATTGTTTGAAA+GGG 0.496330 3_3:-70497208 Msa0468800:CDS
ATGTAAAAGAGCTTCTTCAC+AGG 0.497730 3_3:+70493924 None:intergenic
GGAAGAAATTTCTACAATCA+AGG 0.498493 3_3:-70497529 Msa0468800:CDS
TGTTAATCAAGGGCAAGTAT+TGG 0.498633 3_3:-70498387 Msa0468800:CDS
ATGCACTGAGCTTAAGGATA+AGG 0.499833 3_3:-70494251 Msa0468800:CDS
GCAACAGTTGCAGTTGGTAA+AGG 0.501581 3_3:-70496170 Msa0468800:CDS
TGTTTCAAATTTAAGGGATG+TGG 0.501868 3_3:-70491710 Msa0468800:three_prime_UTR
ATATTGACAATGTGATAGAT+AGG 0.501939 3_3:-70498433 Msa0468800:CDS
CTTCTGTATGTTAGGGATCA+GGG 0.502171 3_3:-70497177 Msa0468800:CDS
CCTATCTCTTTCCGAATCAC+TGG 0.502804 3_3:+70496678 None:intergenic
ACGTGAGCAGCCGATGGGAC+AGG 0.503379 3_3:+70492949 None:intergenic
TCATACATGGATGAGTTAGC+TGG 0.503604 3_3:-70495506 Msa0468800:CDS
TAAGCACCTGAAGATCGTTA+AGG 0.503966 3_3:+70495438 None:intergenic
AACTTCCTTCTGAAGTTCAC+TGG 0.505605 3_3:+70494588 None:intergenic
TTTAAAGTTAAATTCATACA+TGG 0.505813 3_3:-70495519 Msa0468800:CDS
AGTAGAACTTGAGCAGGAAA+AGG 0.506600 3_3:-70498051 Msa0468800:CDS
CCTTGAAATTAAGGATCTAA+AGG 0.506692 3_3:-70493814 Msa0468800:CDS
ATCTTCAAGTAATTTAACCT+TGG 0.507126 3_3:+70493518 None:intergenic
ACAAGCCATTGAAGTCTCTC+AGG 0.507650 3_3:+70497720 None:intergenic
ATCATGCATTTATGGCTACT+GGG 0.509407 3_3:-70492013 Msa0468800:CDS
GGGGTCAATATGAGATGCTC+TGG 0.509577 3_3:+70497224 None:intergenic
AAAGGGATTGGTTCAAGATA+GGG 0.510256 3_3:-70496953 Msa0468800:CDS
TTAAATTTGAAACAAATGTA+GGG 0.510827 3_3:+70491719 None:intergenic
CTTTAGATCCTTAATTTCAA+GGG 0.511247 3_3:+70493815 None:intergenic
GAGACATTGAATACTGAGCT+TGG 0.512525 3_3:-70498083 Msa0468800:CDS
AAGACAATACTCTATTTCTC+AGG 0.512716 3_3:-70495412 Msa0468800:CDS
CCATATTTCCCTGTCCGCTA+AGG 0.513175 3_3:-70495318 Msa0468800:CDS
TTAGCTTCTCAACCTCAAAA+GGG 0.513254 3_3:+70494539 None:intergenic
GATGAGTTAGCTGGAAAGAA+TGG 0.513461 3_3:-70495497 Msa0468800:CDS
ATCGAATGAATCTGAGATGA+AGG 0.514760 3_3:+70499263 None:intergenic
TATAAAAGTAGAACTTGAGC+AGG 0.517132 3_3:-70498057 Msa0468800:CDS
AGAGTGATGGAGTGCATTGA+TGG 0.517670 3_3:-70496295 Msa0468800:CDS
ATCTGTAGTTTCTGAATACA+AGG 0.518659 3_3:-70496857 Msa0468800:CDS
TAAATTAGTTGGAAGTCAGA+AGG 0.518961 3_3:-70493559 Msa0468800:CDS
TCGGAGCCAGCAGGCAATGA+AGG 0.519979 3_3:+70493435 None:intergenic
CGTGGAAGTTATGAAAGAAA+AGG 0.522033 3_3:-70494707 Msa0468800:CDS
CATTGATTTGGAAAGAGATA+GGG 0.523532 3_3:-70496815 Msa0468800:CDS
TTCTCAGCCAGAAATTGTCC+AGG 0.527602 3_3:-70493478 Msa0468800:CDS
CAACTGAGATGTTGAAAGGA+TGG 0.528123 3_3:+70494028 None:intergenic
TATGCAGGGTATCCGGTAGT+GGG 0.528956 3_3:-70492087 Msa0468800:intron
CAGTGATTTGATAGTTTCAG+AGG 0.529388 3_3:+70495628 None:intergenic
ACTGGAAGATGCATTGTTGA+AGG 0.529978 3_3:-70495609 Msa0468800:CDS
TAGAAGAGCTTGACAAGGAA+AGG 0.530393 3_3:-70498115 Msa0468800:CDS
ATTTAAGGGATGTGGTAGGT+AGG 0.530516 3_3:-70491702 Msa0468800:three_prime_UTR
ACCGTTATCTCCTGTCCCAT+CGG 0.530894 3_3:-70492959 Msa0468800:CDS
AGCAAATAATGCTAGCAAGT+TGG 0.532951 3_3:-70495657 Msa0468800:CDS
TTGTCCATGGCAGTTAAGAA+AGG 0.533076 3_3:-70496976 Msa0468800:CDS
CACGTGCGAAATATGCGAAA+AGG 0.533243 3_3:-70492931 Msa0468800:CDS
ATCTATAGTTTATGAATACA+AGG 0.534717 3_3:-70496719 Msa0468800:CDS
GAGTTAGAGATGAAGCAGAC+AGG 0.535610 3_3:-70495841 Msa0468800:CDS
TTGACCCCGAATTGTTTGAA+AGG 0.536921 3_3:-70497209 Msa0468800:CDS
TTCTGGAGGGCACCTTGAGA+TGG 0.537268 3_3:-70495294 Msa0468800:CDS
TCCAGAATCCTTAGCGGACA+GGG 0.538264 3_3:+70495310 None:intergenic
TGGCTTGGATACTAATGAGC+AGG 0.538848 3_3:-70498249 Msa0468800:CDS
TCAGTTATCTCGGAGCCAGC+AGG 0.539504 3_3:+70493426 None:intergenic
TCTTTCCGAGGAGAAAGAGC+AGG 0.541393 3_3:-70495903 Msa0468800:CDS
TCATTTGGAAAGATTGTGAA+AGG 0.541515 3_3:-70494859 Msa0468800:CDS
AGATTCACTAAAGACGTCTC+TGG 0.544951 3_3:-70497958 Msa0468800:CDS
AGGCTTCATTCAGAAGCAAA+AGG 0.545483 3_3:+70491892 None:intergenic
TAATTTAATACCAAGTTCAT+GGG 0.545588 3_3:+70493575 None:intergenic
TGAACTTACTAAAGAGGAGT+TGG 0.545888 3_3:-70497865 Msa0468800:CDS
TACTTGTTGGTGCTCGTGGT+GGG 0.546181 3_3:-70498214 Msa0468800:CDS
ATTAACAACACTTGCAAGAG+AGG 0.546774 3_3:+70498403 None:intergenic
AGCCGCTGAACTTACTAAAG+AGG 0.547967 3_3:-70497871 Msa0468800:CDS
GTTGTAGATAGACAATCTAA+AGG 0.548135 3_3:-70493675 Msa0468800:CDS
GCCGATGGGACAGGAGATAA+CGG 0.549161 3_3:+70492958 None:intergenic
TGAGAGACTTCAATGGCTTG+TGG 0.550472 3_3:-70497718 Msa0468800:CDS
TTATAGCACTGAAAGAAGAA+AGG 0.550801 3_3:-70497059 Msa0468800:CDS
GTCGAACGTGATTAGCTCGT+CGG 0.552346 3_3:+70498852 None:intergenic
ATGGCAGTTAAGAAAGGAAA+GGG 0.552781 3_3:-70496970 Msa0468800:CDS
CTCTCAACTGAGATGTTGAA+AGG 0.555057 3_3:+70494024 None:intergenic
GTAAGTACCTTTATCATCAT+CGG 0.555646 3_3:+70492843 None:intergenic
GTTGCTGGAGCTCAAGAGAA+AGG 0.556424 3_3:-70498192 Msa0468800:CDS
AGTTAAGAAAGGAAAGGGAT+TGG 0.556453 3_3:-70496965 Msa0468800:CDS
GGTCTAAACATGGAAGATGA+AGG 0.557032 3_3:-70497327 Msa0468800:CDS
AGATATTTCTGTTCTTTCCG+AGG 0.557522 3_3:-70495915 Msa0468800:CDS
GAAGCACCTTCATTGCCTGC+TGG 0.557602 3_3:-70493441 Msa0468800:CDS
CAAGAAACTGTAAGCTCCCA+CGG 0.557983 3_3:-70496109 Msa0468800:CDS
CAGTGATTCGGAAAGAGATA+GGG 0.557987 3_3:-70496677 Msa0468800:CDS
TCAGATGATGAAACAGGCTC+TGG 0.558828 3_3:+70497621 None:intergenic
GTCTGTAGTTTCTGAATACA+AGG 0.559029 3_3:-70496581 Msa0468800:CDS
ACTTGAAGACGCTTTATCAC+AGG 0.560778 3_3:-70495945 Msa0468800:CDS
CGAGATAACTGAAGTTGAAG+AGG 0.561968 3_3:-70493415 Msa0468800:intron
CTTTCTCCAAAGAAATCTGA+CGG 0.562343 3_3:+70497382 None:intergenic
CTGAGCCTGCTCTTTCTCCT+CGG 0.563476 3_3:+70495898 None:intergenic
TCACTAAAGACGTCTCTGGC+TGG 0.563652 3_3:-70497954 Msa0468800:CDS
CACTTTGCGTAATTCCAGGA+AGG 0.565325 3_3:+70497671 None:intergenic
TTGCAAGTGTTGTTAATCAA+GGG 0.565522 3_3:-70498397 Msa0468800:CDS
TAATGATTCGGAAAGAGATA+GGG 0.566948 3_3:-70496539 Msa0468800:CDS
AGAAGAGCTTGACAAGGAAA+GGG 0.568440 3_3:-70498114 Msa0468800:CDS
TTCTACCAGTGAACTTCAGA+AGG 0.569191 3_3:-70494593 Msa0468800:CDS
GAAACTGCAGATCCGAATGA+AGG 0.573004 3_3:-70499177 Msa0468800:five_prime_UTR
ATTCATAAGAGCCCCACTAC+CGG 0.574029 3_3:+70492075 None:intergenic
ACAGTTGCAGTTGGTAAAGG+AGG 0.576085 3_3:-70496167 Msa0468800:CDS
AACATACTTGTTGGTGCTCG+TGG 0.576164 3_3:-70498218 Msa0468800:CDS
GTTGCAGTTGGTAAAGGAGG+AGG 0.577199 3_3:-70496164 Msa0468800:CDS
AGCCAGAAATTGTCCAGGAA+AGG 0.577510 3_3:-70493473 Msa0468800:CDS
AATCTGTTAATTCAGACTGA+AGG 0.577595 3_3:+70497439 None:intergenic
CAAAGATTATCTTCTTCAGA+GGG 0.580508 3_3:-70496085 Msa0468800:CDS
ACTGGCCAATGAGTTAAAAG+TGG 0.583034 3_3:-70497094 Msa0468800:CDS
TTTCGCACGTGAGCAGCCGA+TGG 0.584574 3_3:+70492943 None:intergenic
AATAATGCTAGCAAGTTGGT+AGG 0.588315 3_3:-70495653 Msa0468800:CDS
CTTCCAGTATATCCTCGTAG+AGG 0.588319 3_3:+70497148 None:intergenic
TCTTGCTCTTGATATTGGTG+TGG 0.588645 3_3:-70492896 Msa0468800:CDS
ATGAGTCCTAATCTTGCTCT+GGG 0.589127 3_3:+70492049 None:intergenic
GAACGATCAGAGGAGAAGAC+TGG 0.589437 3_3:-70497015 Msa0468800:CDS
CAATATGAGATGCTCTGGTG+AGG 0.589768 3_3:+70497229 None:intergenic
GATAGAGAATCTAAATGCAA+AGG 0.590859 3_3:-70498525 Msa0468800:CDS
TGTGACAAAAGGAAAGGCAT+TGG 0.591898 3_3:-70497991 Msa0468800:CDS
AGCTGCTGATGAAAATGAAG+AGG 0.592739 3_3:-70498803 Msa0468800:CDS
CCTGGAATTACGCAAAGTGA+AGG 0.593121 3_3:-70497667 Msa0468800:CDS
TGGAGGGCACCTTGAGATGG+AGG 0.593233 3_3:-70495291 Msa0468800:intron
CTCCTCTTTAGTAAGTTCAG+CGG 0.595348 3_3:+70497869 None:intergenic
AATATGAGATGCTCTGGTGA+GGG 0.599961 3_3:+70497230 None:intergenic
GAAAGACCTTGAACGATCAG+AGG 0.606094 3_3:-70497025 Msa0468800:CDS
TTCGCACGTGAGCAGCCGAT+GGG 0.606106 3_3:+70492944 None:intergenic
GGATGACAGGAATAAACTGC+AGG 0.609595 3_3:-70497697 Msa0468800:CDS
GGAAAGCATTCCAAAGCTAG+AGG 0.609618 3_3:-70496392 Msa0468800:CDS
AAGAAGATAATCTTTGCCCG+TGG 0.610274 3_3:+70496092 None:intergenic
GCTTCGGGACAAGTTGTCCA+TGG 0.612204 3_3:-70496989 Msa0468800:CDS
CTGTCCGCTAAGGATTCTGG+AGG 0.612441 3_3:-70495308 Msa0468800:CDS
ATACTTGTTGGTGCTCGTGG+TGG 0.612698 3_3:-70498215 Msa0468800:CDS
TCTGGATTCGTACCGAAGCA+AGG 0.612897 3_3:-70492727 Msa0468800:CDS
TAACATGTTACAGAGAGTGA+TGG 0.614906 3_3:-70496308 Msa0468800:CDS
CACCAATATCAAGAGCAAGA+TGG 0.615353 3_3:+70492899 None:intergenic
TAGCTTCTCAACCTCAAAAG+GGG 0.615577 3_3:+70494540 None:intergenic
TCAAATTTAAGGGATGTGGT+AGG 0.616069 3_3:-70491706 Msa0468800:three_prime_UTR
GAAAGATGATATTTCTACCC+TGG 0.617313 3_3:-70495585 Msa0468800:CDS
TATGGCTGTGACAAAAGGAA+AGG 0.617967 3_3:-70497997 Msa0468800:CDS
GAACCCTTTCAAACAATTCG+GGG 0.618134 3_3:+70497205 None:intergenic
GTGCCCTCCAGAATCCTTAG+CGG 0.618228 3_3:+70495304 None:intergenic
CATGGCAGTTAAGAAAGGAA+AGG 0.618421 3_3:-70496971 Msa0468800:CDS
ATGTGAGACCCTGAAGAATG+TGG 0.620116 3_3:-70495366 Msa0468800:CDS
TGGGAAAATAGTATATATCG+AGG 0.620582 3_3:-70498351 Msa0468800:CDS
AGAGATAGGGACAATCTACA+AGG 0.621312 3_3:-70496526 Msa0468800:CDS
GCTTATAGATTCTTCTCACA+AGG 0.624624 3_3:-70497577 Msa0468800:CDS
GATTGCAGAGAACTATTAGA+GGG 0.634537 3_3:+70491842 None:intergenic
AATTGAATAATGGCGTAGCG+GGG 0.634857 3_3:-70498741 Msa0468800:CDS
TGTAGAGCAACAGTTGCAGT+TGG 0.636192 3_3:-70496176 Msa0468800:CDS
AAGAAACTGTAAGCTCCCAC+GGG 0.638197 3_3:-70496108 Msa0468800:CDS
AGAATGCTACCTCCATCTCA+AGG 0.638406 3_3:+70495282 None:intergenic
GAGGCCCAACATGAAAAGGA+TGG 0.642746 3_3:-70498458 Msa0468800:CDS
TTCGGATTCTCAATCAAATG+GGG 0.643731 3_3:-70499087 Msa0468800:CDS
AGAAGATAATCTTTGCCCGT+GGG 0.644429 3_3:+70496093 None:intergenic
GTATTGGACGAGTCTAGAAG+TGG 0.644582 3_3:-70498371 Msa0468800:CDS
TATTGATGACTTAACGACCA+AGG 0.644949 3_3:-70493535 Msa0468800:CDS
TGTAAAAGAGCTTCTTCACA+GGG 0.646511 3_3:+70493925 None:intergenic
GTAGGGCAAATACAATGTAA+GGG 0.648356 3_3:+70491736 None:intergenic
GACGAGCTAATCACGTTCGA+CGG 0.648618 3_3:-70498850 Msa0468800:CDS
TCATGCATTTATGGCTACTG+GGG 0.649283 3_3:-70492012 Msa0468800:CDS
ATTGAATAATGGCGTAGCGG+GGG 0.652154 3_3:-70498740 Msa0468800:CDS
TATTGGACGAGTCTAGAAGT+GGG 0.652677 3_3:-70498370 Msa0468800:CDS
TGAAGATGTTAAATCTACAG+AGG 0.663925 3_3:-70498896 Msa0468800:CDS
ATGCAGGGTATCCGGTAGTG+GGG 0.667035 3_3:-70492086 Msa0468800:intron
AATGGCTATTGTTGAGCACG+TGG 0.670410 3_3:-70494725 Msa0468800:CDS
ACTTGGACAGTCATTCTCTG+AGG 0.677988 3_3:-70498273 Msa0468800:CDS
AGAGATAGGGACAATCAACA+AGG 0.681212 3_3:-70496664 Msa0468800:CDS
GCAGACAAGAGAACTATCAG+AGG 0.685394 3_3:-70495819 Msa0468800:CDS
GTAGAGCATAAATATCATTG+CGG 0.687329 3_3:+70497553 None:intergenic
AGAGCTTGACAAGGAAAGGG+CGG 0.695541 3_3:-70498111 Msa0468800:CDS
TGAATTGAATAATGGCGTAG+CGG 0.698333 3_3:-70498743 Msa0468800:CDS
TGTCCGCTAAGGATTCTGGA+GGG 0.704120 3_3:-70495307 Msa0468800:CDS
GATCCTGCAAGCTTCATCCG+AGG 0.704365 3_3:-70498477 Msa0468800:CDS
ATTGGTAGAAGAGCTTGACA+AGG 0.714538 3_3:-70498120 Msa0468800:CDS
CGAACGTGATTAGCTCGTCG+GGG 0.724081 3_3:+70498854 None:intergenic
GATGACAGGAATAAACTGCA+GGG 0.740580 3_3:-70497696 Msa0468800:CDS
TCAGGGCTTAAACCTCTACG+AGG 0.808019 3_3:-70497160 Msa0468800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAAACTTTTAAATTTTG+AGG + chr3_3:70498745-70498764 None:intergenic 10.0%
!!! ATTAACAAAATTTTCTTTCT+CGG + chr3_3:70492340-70492359 None:intergenic 15.0%
!!! TTTAAAGTTAAATTCATACA+TGG - chr3_3:70495415-70495434 Msa0468800:CDS 15.0%
!!! AGAAAAAATAATAGATGTTT+TGG - chr3_3:70497222-70497241 Msa0468800:CDS 15.0%
!!! GAAAAAATAATAGATGTTTT+GGG - chr3_3:70497223-70497242 Msa0468800:CDS 15.0%
!!! TTAAATTTGAAACAAATGTA+GGG + chr3_3:70499218-70499237 None:intergenic 15.0%
!! TACATTTGTTTCAAATTTAA+GGG - chr3_3:70499218-70499237 Msa0468800:five_prime_UTR 15.0%
!!! TCTAAGTCAAATTACATTTT+AGG - chr3_3:70491635-70491654 Msa0468800:three_prime_UTR 20.0%
!!! CTAAGTCAAATTACATTTTA+GGG - chr3_3:70491636-70491655 Msa0468800:three_prime_UTR 20.0%
!! ATAAGTATCAATGTTTGATT+CGG + chr3_3:70491879-70491898 None:intergenic 20.0%
!! TCAATCACATATAGATTATT+TGG + chr3_3:70491920-70491939 None:intergenic 20.0%
!! AATCTATATGTGATTGAAAT+TGG - chr3_3:70491923-70491942 Msa0468800:three_prime_UTR 20.0%
!!! TATTTAATTTGGTGATATTC+AGG - chr3_3:70492361-70492380 Msa0468800:intron 20.0%
!!! AAAATGTTAGTAGATTTTTC+TGG - chr3_3:70493586-70493605 Msa0468800:CDS 20.0%
!! TTATGCTTTCAAAAAGTAAA+AGG - chr3_3:70493670-70493689 Msa0468800:CDS 20.0%
!! TATGCTTTCAAAAAGTAAAA+GGG - chr3_3:70493671-70493690 Msa0468800:CDS 20.0%
!! ATCTATAGTTTATGAATACA+AGG - chr3_3:70494215-70494234 Msa0468800:CDS 20.0%
!!! TGATCTTTTGGAAATAAAAA+GGG - chr3_3:70494566-70494585 Msa0468800:CDS 20.0%
!!! TGTTCTAGAAGAAAAATTAA+AGG - chr3_3:70496719-70496738 Msa0468800:CDS 20.0%
!! AAAATAAATTCAACATGGTT+AGG + chr3_3:70496822-70496841 None:intergenic 20.0%
!! CGTTAAAAATAAATTCAACA+TGG + chr3_3:70496827-70496846 None:intergenic 20.0%
!! ATCTGAAAATTCAAAATCTA+AGG - chr3_3:70497336-70497355 Msa0468800:CDS 20.0%
!! TAATTTAATACCAAGTTCAT+GGG + chr3_3:70497362-70497381 None:intergenic 20.0%
!! ACTAAACATTTAGATTGAAA+TGG + chr3_3:70497610-70497629 None:intergenic 20.0%
!! ACAAATAAAGTTCCAATATA+AGG + chr3_3:70497792-70497811 None:intergenic 20.0%
!! TATCTGTTACTAATTTATTG+TGG - chr3_3:70497835-70497854 Msa0468800:CDS 20.0%
!! TTAATAATAGATTACTTTGC+AGG - chr3_3:70498159-70498178 Msa0468800:CDS 20.0%
!! TAGCATTTGATATAATAATG+TGG + chr3_3:70498696-70498715 None:intergenic 20.0%
!!! AGGTATTGAAATTGAATTAA+TGG + chr3_3:70498725-70498744 None:intergenic 20.0%
!! GGTAGCATTAAAAAATTTAA+CGG + chr3_3:70498798-70498817 None:intergenic 20.0%
!!! CTTAAATTTGAAACAAATGT+AGG + chr3_3:70499219-70499238 None:intergenic 20.0%
!! CTACATTTGTTTCAAATTTA+AGG - chr3_3:70499217-70499236 Msa0468800:five_prime_UTR 20.0%
!! AGATTCATTCGATTCAATTT+TGG - chr3_3:70491681-70491700 Msa0468800:three_prime_UTR 25.0%
! ATTCGATTCAATGCTTATAT+AGG - chr3_3:70491704-70491723 Msa0468800:three_prime_UTR 25.0%
!! AGTGAGTATTTGAATTTTGA+CGG - chr3_3:70491780-70491799 Msa0468800:three_prime_UTR 25.0%
! CATTGATACTTATCAAAATC+AGG - chr3_3:70491886-70491905 Msa0468800:three_prime_UTR 25.0%
! TTTAATCAATTAATGGGACT+TGG - chr3_3:70491966-70491985 Msa0468800:three_prime_UTR 25.0%
!! TGATCTAAAAGATGAAGTTT+TGG - chr3_3:70492008-70492027 Msa0468800:CDS 25.0%
!! GATCTAAAAGATGAAGTTTT+GGG - chr3_3:70492009-70492028 Msa0468800:CDS 25.0%
!!! CATTTTGGTGAATTGAATAA+TGG - chr3_3:70492183-70492202 Msa0468800:intron 25.0%
! ATATTGACAATGTGATAGAT+AGG - chr3_3:70492501-70492520 Msa0468800:intron 25.0%
! CTTTCTGATATTTATCAACT+TGG - chr3_3:70492644-70492663 Msa0468800:intron 25.0%
!! TCATTTGAGTATTTTGCTTT+TGG - chr3_3:70493450-70493469 Msa0468800:CDS 25.0%
! CAATAGATTGTCTAATGATT+CGG - chr3_3:70494383-70494402 Msa0468800:CDS 25.0%
!!! CTGATCTTTTGGAAATAAAA+AGG - chr3_3:70494565-70494584 Msa0468800:CDS 25.0%
!!! TTTTGGAAATAAAAAGGGAA+AGG - chr3_3:70494571-70494590 Msa0468800:CDS 25.0%
!!! AATTTTATTTGCATCTTCCA+GGG + chr3_3:70495369-70495388 None:intergenic 25.0%
!! CAGACTTTTCTAATTATTTG+TGG + chr3_3:70495786-70495805 None:intergenic 25.0%
! CACAAATAATTAGAAAAGTC+TGG - chr3_3:70495784-70495803 Msa0468800:CDS 25.0%
! AATATTTACAAGAGTGATAC+AGG + chr3_3:70495919-70495938 None:intergenic 25.0%
!!! GTTTGACTTCAAATTTTTCA+AGG + chr3_3:70496008-70496027 None:intergenic 25.0%
!! TGAAAAATTTGAAGTCAAAC+TGG - chr3_3:70496008-70496027 Msa0468800:CDS 25.0%
! CTTTCCAAATGATGAAATTA+TGG + chr3_3:70496067-70496086 None:intergenic 25.0%
! AGAAAAATTAAAGGACAAAG+AGG - chr3_3:70496728-70496747 Msa0468800:CDS 25.0%
! TATCTTCAGATTCTACAATA+GGG + chr3_3:70496967-70496986 None:intergenic 25.0%
!!! ACATTATTGATAGTGTTACT+AGG - chr3_3:70497029-70497048 Msa0468800:CDS 25.0%
! CTTTAGATCCTTAATTTCAA+GGG + chr3_3:70497122-70497141 None:intergenic 25.0%
!!! ATTTTCAGATTCTGAAAGAA+TGG + chr3_3:70497326-70497345 None:intergenic 25.0%
! CTAATTTAATACCAAGTTCA+TGG + chr3_3:70497363-70497382 None:intergenic 25.0%
! GAACTTGGTATTAAATTAGT+TGG - chr3_3:70497364-70497383 Msa0468800:CDS 25.0%
! ATCTTCAAGTAATTTAACCT+TGG + chr3_3:70497419-70497438 None:intergenic 25.0%
!! TTTTTACATGATCCAATATC+AGG - chr3_3:70497574-70497593 Msa0468800:CDS 25.0%
!!! TTTTTGTGCCATTATATAGA+TGG - chr3_3:70497668-70497687 Msa0468800:CDS 25.0%
!!! TTTTGTGCCATTATATAGAT+GGG - chr3_3:70497669-70497688 Msa0468800:CDS 25.0%
!!! TTAGGAATTTAGCCTTATAT+TGG - chr3_3:70497777-70497796 Msa0468800:CDS 25.0%
!! ATCACTTCGATATTTTCTTT+TGG + chr3_3:70497902-70497921 None:intergenic 25.0%
!!! CTGTATATCATTTTTACCTT+TGG - chr3_3:70498278-70498297 Msa0468800:CDS 25.0%
!! ATTTTTACCTTTGGTAAAGT+AGG - chr3_3:70498287-70498306 Msa0468800:CDS 25.0%
! ATCTATACATGTTCCATTTA+AGG + chr3_3:70498535-70498554 None:intergenic 25.0%
! CAATTTATTTATTCCAAGGA+TGG + chr3_3:70498592-70498611 None:intergenic 25.0%
! AAGAACATTTGAAGGTAAAA+TGG - chr3_3:70498623-70498642 Msa0468800:intron 25.0%
! AATTTAACGGTAAAAATGAC+TGG + chr3_3:70498785-70498804 None:intergenic 25.0%
!! ATTTGCTAATCATGCATTTA+TGG - chr3_3:70498913-70498932 Msa0468800:CDS 25.0%
! GATAAGACTAAAGAAAAACA+GGG + chr3_3:70499069-70499088 None:intergenic 25.0%
! TGATAAGACTAAAGAAAAAC+AGG + chr3_3:70499070-70499089 None:intergenic 25.0%
!! AGATTATAGTTTTCATGTCT+GGG - chr3_3:70499132-70499151 Msa0468800:exon 25.0%
! ATCTGAGATGAAGGAAATAA+AGG + chr3_3:70491665-70491684 None:intergenic 30.0%
GTCTGAGAATAATCACTTAT+CGG - chr3_3:70491811-70491830 Msa0468800:three_prime_UTR 30.0%
ATTCGGATTCTCAATCAAAT+GGG - chr3_3:70491846-70491865 Msa0468800:three_prime_UTR 30.0%
TGAAGATGTTAAATCTACAG+AGG - chr3_3:70492038-70492057 Msa0468800:CDS 30.0%
! AAGTGTTGTGAATGAATATC+AGG - chr3_3:70492266-70492285 Msa0468800:intron 30.0%
GATAGAGAATCTAAATGCAA+AGG - chr3_3:70492409-70492428 Msa0468800:intron 30.0%
! TTGCAAGTGTTGTTAATCAA+GGG - chr3_3:70492537-70492556 Msa0468800:intron 30.0%
TGGGAAAATAGTATATATCG+AGG - chr3_3:70492583-70492602 Msa0468800:intron 30.0%
GAATTTGGAAACATACTTGT+TGG - chr3_3:70492707-70492726 Msa0468800:CDS 30.0%
TATAAAAGTAGAACTTGAGC+AGG - chr3_3:70492877-70492896 Msa0468800:CDS 30.0%
TACCAAAGAGAAACTTAGTA+TGG - chr3_3:70492919-70492938 Msa0468800:CDS 30.0%
GAAATGCTTAATTGAATTGC+AGG - chr3_3:70493021-70493040 Msa0468800:intron 30.0%
! TTGTTGTAGTGAAGTATTCA+GGG + chr3_3:70493119-70493138 None:intergenic 30.0%
! TTTGTTGTAGTGAAGTATTC+AGG + chr3_3:70493120-70493139 None:intergenic 30.0%
TTCTTGTACTTGCTCAAAAA+TGG + chr3_3:70493149-70493168 None:intergenic 30.0%
! ATCTAGAATCACAAATGAAC+TGG - chr3_3:70493335-70493354 Msa0468800:intron 30.0%
TAGAGCATAAATATCATTGC+GGG + chr3_3:70493383-70493402 None:intergenic 30.0%
GTAGAGCATAAATATCATTG+CGG + chr3_3:70493384-70493403 None:intergenic 30.0%
CAATGATATTTATGCTCTAC+AGG - chr3_3:70493384-70493403 Msa0468800:intron 30.0%
GGAAGAAATTTCTACAATCA+AGG - chr3_3:70493405-70493424 Msa0468800:intron 30.0%
CAAATGATCAATACAGTTGA+CGG + chr3_3:70493437-70493456 None:intergenic 30.0%
AATCTGTTAATTCAGACTGA+AGG + chr3_3:70493498-70493517 None:intergenic 30.0%
AGTCTGAATTAACAGATTTG+AGG - chr3_3:70493500-70493519 Msa0468800:CDS 30.0%
!! AGATTTTTCTGGTCTAAACA+TGG - chr3_3:70493597-70493616 Msa0468800:CDS 30.0%
TTGAACCCTTTCAAACAATT+CGG + chr3_3:70493734-70493753 None:intergenic 30.0%
TTCAAAGTCTTCTGTATGTT+AGG - chr3_3:70493749-70493768 Msa0468800:CDS 30.0%
TCAAAGTCTTCTGTATGTTA+GGG - chr3_3:70493750-70493769 Msa0468800:CDS 30.0%
TAGATCAGATGTGAATAAAC+TGG - chr3_3:70493822-70493841 Msa0468800:CDS 30.0%
!! AGATACCACTTTTAACTCAT+TGG + chr3_3:70493848-70493867 None:intergenic 30.0%
! TTATAGCACTGAAAGAAGAA+AGG - chr3_3:70493875-70493894 Msa0468800:CDS 30.0%
ATCTGTAGTTTCTGAATACA+AGG - chr3_3:70494077-70494096 Msa0468800:intron 30.0%
! CAATAGATTGTCCATTGATT+TGG - chr3_3:70494107-70494126 Msa0468800:intron 30.0%
!! CATTGATTTGGAAAGAGATA+GGG - chr3_3:70494119-70494138 Msa0468800:intron 30.0%
! TAATGATTCGGAAAGAGATA+GGG - chr3_3:70494395-70494414 Msa0468800:CDS 30.0%
! CAATTTAGCTTCAAGTATAC+TGG + chr3_3:70494796-70494815 None:intergenic 30.0%
CAGTATACTTGAAGCTAAAT+TGG - chr3_3:70494794-70494813 Msa0468800:CDS 30.0%
CAAAGATTATCTTCTTCAGA+GGG - chr3_3:70494849-70494868 Msa0468800:CDS 30.0%
TTCAACTTCTAGATCCTTTA+TGG + chr3_3:70495150-70495169 None:intergenic 30.0%
!! CAATTTTATTTGCATCTTCC+AGG + chr3_3:70495370-70495389 None:intergenic 30.0%
TGCAAATAAAATTGCCAAAC+AGG - chr3_3:70495376-70495395 Msa0468800:CDS 30.0%
! AAGACAATACTCTATTTCTC+AGG - chr3_3:70495522-70495541 Msa0468800:CDS 30.0%
!!! TCTTACTATCCTTTTTTAGC+CGG - chr3_3:70495672-70495691 Msa0468800:CDS 30.0%
AGAAAATAACCGGCTAAAAA+AGG + chr3_3:70495684-70495703 None:intergenic 30.0%
ACACAACTTGAGAAAATAAC+CGG + chr3_3:70495694-70495713 None:intergenic 30.0%
TCAATCCCATGAAAATTACA+CGG - chr3_3:70495838-70495857 Msa0468800:CDS 30.0%
!!! TATGTGATGTTTTTTGTTCC+AGG - chr3_3:70495948-70495967 Msa0468800:CDS 30.0%
! TCTGAAAAAGATTTTCTCAG+AGG + chr3_3:70495982-70496001 None:intergenic 30.0%
!!! CTGAGAAAATCTTTTTCAGA+TGG - chr3_3:70495982-70496001 Msa0468800:CDS 30.0%
GACACCATAATTTCATCATT+TGG - chr3_3:70496060-70496079 Msa0468800:CDS 30.0%
TCATTTGGAAAGATTGTGAA+AGG - chr3_3:70496075-70496094 Msa0468800:CDS 30.0%
GGAAACAGAGTCTAATATAA+TGG - chr3_3:70496191-70496210 Msa0468800:CDS 30.0%
!! AGAAAGTTGATAAATGCTTC+TGG - chr3_3:70496477-70496496 Msa0468800:CDS 30.0%
!!! AACAACAGTTGCTTTTGAAT+TGG - chr3_3:70496587-70496606 Msa0468800:CDS 30.0%
! TAAGAACAAAGTTTTGCAGT+TGG - chr3_3:70496632-70496651 Msa0468800:CDS 30.0%
! CTAGATTTTCCTTTTTGCAT+TGG - chr3_3:70496874-70496893 Msa0468800:CDS 30.0%
ATATCTTTGACGAGATAGAT+AGG - chr3_3:70496933-70496952 Msa0468800:CDS 30.0%
CTATCTTCAGATTCTACAAT+AGG + chr3_3:70496968-70496987 None:intergenic 30.0%
TGTAGAATCTGAAGATAGTA+TGG - chr3_3:70496970-70496989 Msa0468800:CDS 30.0%
CCTTTAGATCCTTAATTTCA+AGG + chr3_3:70497123-70497142 None:intergenic 30.0%
CCTTGAAATTAAGGATCTAA+AGG - chr3_3:70497120-70497139 Msa0468800:CDS 30.0%
GTTGTAGATAGACAATCTAA+AGG - chr3_3:70497259-70497278 Msa0468800:CDS 30.0%
! ATGATATGCTTTTCCAATTG+CGG + chr3_3:70497301-70497320 None:intergenic 30.0%
TAAATTAGTTGGAAGTCAGA+AGG - chr3_3:70497375-70497394 Msa0468800:CDS 30.0%
TTGAAGATTCGATTCAAGAT+AGG - chr3_3:70497431-70497450 Msa0468800:CDS 30.0%
!! TTAGTGCTTTATTTGATTCC+TGG - chr3_3:70497739-70497758 Msa0468800:CDS 30.0%
! TTGGAACTTTATTTGTTTCC+TGG - chr3_3:70497796-70497815 Msa0468800:CDS 30.0%
TAAAACAAGAGTGATAAACC+AGG + chr3_3:70497817-70497836 None:intergenic 30.0%
GTAAGTACCTTTATCATCAT+CGG + chr3_3:70498094-70498113 None:intergenic 30.0%
ACAAGTTAAAATGCTGAAAC+AGG + chr3_3:70498327-70498346 None:intergenic 30.0%
!!! AGCATTTTAACTTGTAACCA+TGG - chr3_3:70498332-70498351 Msa0468800:CDS 30.0%
AAGCACTCTTCAAATTTACA+TGG - chr3_3:70498355-70498374 Msa0468800:CDS 30.0%
! CAGATGATCTAAAATCCTTA+AGG - chr3_3:70498413-70498432 Msa0468800:CDS 30.0%
! ATGATCTAAAATCCTTAAGG+TGG - chr3_3:70498416-70498435 Msa0468800:CDS 30.0%
! GTTAAGTTGTTTGAGATTCT+AGG + chr3_3:70498449-70498468 None:intergenic 30.0%
TAGACTATTAAACTGATGCA+GGG - chr3_3:70498559-70498578 Msa0468800:intron 30.0%
CCTGCAATTTATTTATTCCA+AGG + chr3_3:70498596-70498615 None:intergenic 30.0%
CCTTGGAATAAATAAATTGC+AGG - chr3_3:70498593-70498612 Msa0468800:intron 30.0%
GCTTGTTTAAGAACATTTGA+AGG - chr3_3:70498615-70498634 Msa0468800:intron 30.0%
! AAATTGTGCTCTAAACAATC+TGG - chr3_3:70498959-70498978 Msa0468800:intron 30.0%
! ACATTATAATTTGCAGATGC+AGG + chr3_3:70499003-70499022 None:intergenic 30.0%
! TTCTCTGCAATCACATTTTA+GGG - chr3_3:70499103-70499122 Msa0468800:CDS 30.0%
! GAGATTATAGTTTTCATGTC+TGG - chr3_3:70499131-70499150 Msa0468800:exon 30.0%
TGTTTCAAATTTAAGGGATG+TGG - chr3_3:70499224-70499243 Msa0468800:five_prime_UTR 30.0%
TCATTGCTTGAGATAGAAAT+GGG + chr3_3:70499324-70499343 None:intergenic 30.0%
TTCATTGCTTGAGATAGAAA+TGG + chr3_3:70499325-70499344 None:intergenic 30.0%
! ATCGAATGAATCTGAGATGA+AGG + chr3_3:70491674-70491693 None:intergenic 35.0%
CAAATACTCACTCCTTCATT+CGG + chr3_3:70491772-70491791 None:intergenic 35.0%
GATTCGGATTCTCAATCAAA+TGG - chr3_3:70491845-70491864 Msa0468800:three_prime_UTR 35.0%
TTCGGATTCTCAATCAAATG+GGG - chr3_3:70491847-70491866 Msa0468800:three_prime_UTR 35.0%
! CATCAACAACAGAGTCATTT+TGG - chr3_3:70492168-70492187 Msa0468800:intron 35.0%
TGAATTGAATAATGGCGTAG+CGG - chr3_3:70492191-70492210 Msa0468800:intron 35.0%
! ATCACCATCCTTTTCATGTT+GGG + chr3_3:70492483-70492502 None:intergenic 35.0%
! TATCACCATCCTTTTCATGT+TGG + chr3_3:70492484-70492503 None:intergenic 35.0%
ATTAACAACACTTGCAAGAG+AGG + chr3_3:70492534-70492553 None:intergenic 35.0%
! CTTGCAAGTGTTGTTAATCA+AGG - chr3_3:70492536-70492555 Msa0468800:intron 35.0%
TGTTAATCAAGGGCAAGTAT+TGG - chr3_3:70492547-70492566 Msa0468800:intron 35.0%
GATACTAATGAGCAGGAATT+TGG - chr3_3:70492692-70492711 Msa0468800:intron 35.0%
AGAAGGCGAAAATCAGAAAT+TGG - chr3_3:70492796-70492815 Msa0468800:intron 35.0%
AGCCATACTAAGTTTCTCTT+TGG + chr3_3:70492924-70492943 None:intergenic 35.0%
TGAACTTACTAAAGAGGAGT+TGG - chr3_3:70493069-70493088 Msa0468800:intron 35.0%
! TGCAACCATATTTTCACTCT+GGG + chr3_3:70493095-70493114 None:intergenic 35.0%
! ATGCAACCATATTTTCACTC+TGG + chr3_3:70493096-70493115 None:intergenic 35.0%
TCTAGATCAGATGATGAAAC+AGG + chr3_3:70493322-70493341 None:intergenic 35.0%
GCTTATAGATTCTTCTCACA+AGG - chr3_3:70493357-70493376 Msa0468800:intron 35.0%
! ACAGATTTGAGGTTCGAATA+TGG - chr3_3:70493511-70493530 Msa0468800:CDS 35.0%
TTCGAATATGGAGAACTTGT+TGG - chr3_3:70493523-70493542 Msa0468800:CDS 35.0%
CTTTCTCCAAAGAAATCTGA+CGG + chr3_3:70493555-70493574 None:intergenic 35.0%
CAAAAAGTAAAAGGGCAGAA+TGG - chr3_3:70493679-70493698 Msa0468800:CDS 35.0%
TGAACCCTTTCAAACAATTC+GGG + chr3_3:70493733-70493752 None:intergenic 35.0%
ATGGCAGTTAAGAAAGGAAA+GGG - chr3_3:70493964-70493983 Msa0468800:CDS 35.0%
AGTTAAGAAAGGAAAGGGAT+TGG - chr3_3:70493969-70493988 Msa0468800:CDS 35.0%
!! AAAGGGATTGGTTCAAGATA+GGG - chr3_3:70493981-70494000 Msa0468800:CDS 35.0%
CAAGATAGGGACAATCTAAA+AGG - chr3_3:70493994-70494013 Msa0468800:CDS 35.0%
CCTATCTCTTTCCAAATCAA+TGG + chr3_3:70494121-70494140 None:intergenic 35.0%
!! CCATTGATTTGGAAAGAGAT+AGG - chr3_3:70494118-70494137 Msa0468800:intron 35.0%
CAATAGATTGTCCAGTGATT+CGG - chr3_3:70494245-70494264 Msa0468800:CDS 35.0%
GTCTGTAGTTTCTGAATACA+AGG - chr3_3:70494353-70494372 Msa0468800:CDS 35.0%
! CTAATGATTCGGAAAGAGAT+AGG - chr3_3:70494394-70494413 Msa0468800:CDS 35.0%
CAATAGATTGTCCAGTGATT+TGG - chr3_3:70494245-70494264 Msa0468800:CDS 35.0%
TCAGTTTGAACAGTTCTTGA+TGG - chr3_3:70494596-70494615 Msa0468800:CDS 35.0%
TAACATGTTACAGAGAGTGA+TGG - chr3_3:70494626-70494645 Msa0468800:CDS 35.0%
! TTTTGGTGAACCTATGGAAA+AGG - chr3_3:70494686-70494705 Msa0468800:CDS 35.0%
AACCTATGGAAAAGGTGAAA+TGG - chr3_3:70494694-70494713 Msa0468800:CDS 35.0%
CTACATGTATCTTAGCTTCT+TGG + chr3_3:70494743-70494762 None:intergenic 35.0%
GCAAAGATTATCTTCTTCAG+AGG - chr3_3:70494848-70494867 Msa0468800:CDS 35.0%
!! TTCTCAACTTGCTGAAGAAA+AGG - chr3_3:70494878-70494897 Msa0468800:CDS 35.0%
ACACGAGAAAGAAAAAGTTG+TGG - chr3_3:70494911-70494930 Msa0468800:CDS 35.0%
! AGATATTTCTGTTCTTTCCG+AGG - chr3_3:70495019-70495038 Msa0468800:intron 35.0%
TCTAGAAGTTGAACTATCTC+AGG - chr3_3:70495157-70495176 Msa0468800:intron 35.0%
! TCAAGTTGTCAAGACTGAAT+TGG - chr3_3:70495223-70495242 Msa0468800:intron 35.0%
AGCAAATAATGCTAGCAAGT+TGG - chr3_3:70495277-70495296 Msa0468800:intron 35.0%
!! AATAATGCTAGCAAGTTGGT+AGG - chr3_3:70495281-70495300 Msa0468800:intron 35.0%
! CAGTGATTTGATAGTTTCAG+AGG + chr3_3:70495309-70495328 None:intergenic 35.0%
!! CTCTGAAACTATCAAATCAC+TGG - chr3_3:70495307-70495326 Msa0468800:CDS 35.0%
! GAAAGATGATATTTCTACCC+TGG - chr3_3:70495349-70495368 Msa0468800:CDS 35.0%
!! AACAAATCTCTAGAGCTCAT+TGG - chr3_3:70495470-70495489 Msa0468800:CDS 35.0%
AATGAGATCCACATTCTTCA+GGG + chr3_3:70495579-70495598 None:intergenic 35.0%
TAGTGGTCGAAAGATTTAGA+TGG + chr3_3:70495753-70495772 None:intergenic 35.0%
TTTGTGGACACATATCATAG+TGG + chr3_3:70495770-70495789 None:intergenic 35.0%
CAATCCCATGAAAATTACAC+GGG - chr3_3:70495839-70495858 Msa0468800:CDS 35.0%
AATCCCATGAAAATTACACG+GGG - chr3_3:70495840-70495859 Msa0468800:CDS 35.0%
! GAAAAAGATTTTCTCAGAGG+TGG + chr3_3:70495979-70495998 None:intergenic 35.0%
CGTGGAAGTTATGAAAGAAA+AGG - chr3_3:70496227-70496246 Msa0468800:CDS 35.0%
GACAAAGTTGAACGAAGAAA+AGG - chr3_3:70496260-70496279 Msa0468800:CDS 35.0%
! ACTGATATCGTTCTCTAAAG+TGG + chr3_3:70496298-70496317 None:intergenic 35.0%
AAGGAAGTTCACCAAAATCT+TGG - chr3_3:70496360-70496379 Msa0468800:CDS 35.0%
AGGAAGTTCACCAAAATCTT+GGG - chr3_3:70496361-70496380 Msa0468800:CDS 35.0%
TTAGCTTCTCAACCTCAAAA+GGG + chr3_3:70496398-70496417 None:intergenic 35.0%
! TTTAGCTTCTCAACCTCAAA+AGG + chr3_3:70496399-70496418 None:intergenic 35.0%
TGTAAAAGAGCTTCTTCACA+GGG + chr3_3:70497012-70497031 None:intergenic 35.0%
ATGTAAAAGAGCTTCTTCAC+AGG + chr3_3:70497013-70497032 None:intergenic 35.0%
AACTAAGGCCCTTGAAATTA+AGG - chr3_3:70497111-70497130 Msa0468800:CDS 35.0%
TAGAGAATTATTGCCGCAAT+TGG - chr3_3:70497285-70497304 Msa0468800:CDS 35.0%
! TATTGATGACTTAACGACCA+AGG - chr3_3:70497399-70497418 Msa0468800:CDS 35.0%
CTCTTCAACTTCAGTTATCT+CGG + chr3_3:70497521-70497540 None:intergenic 35.0%
ACTTCGACCCATCTATATAA+TGG + chr3_3:70497679-70497698 None:intergenic 35.0%
TAATTCATCAGCTCAAATCC+AGG + chr3_3:70497760-70497779 None:intergenic 35.0%
TGGATTTGAGCTGATGAATT+AGG - chr3_3:70497759-70497778 Msa0468800:CDS 35.0%
! AAGAGTTTGCTTATGTACAC+AGG - chr3_3:70497936-70497955 Msa0468800:CDS 35.0%
! AGAGTTTGCTTATGTACACA+GGG - chr3_3:70497937-70497956 Msa0468800:CDS 35.0%
AAATGCTCCTACTTTACCAA+AGG + chr3_3:70498297-70498316 None:intergenic 35.0%
!! AAATTTGAAGAGTGCTTCCA+TGG + chr3_3:70498352-70498371 None:intergenic 35.0%
AGACTTGAGATGATGTTTAG+TGG - chr3_3:70498472-70498491 Msa0468800:CDS 35.0%
TTGAGATGATGTTTAGTGGT+AGG - chr3_3:70498476-70498495 Msa0468800:CDS 35.0%
GTAGACTATTAAACTGATGC+AGG - chr3_3:70498558-70498577 Msa0468800:intron 35.0%
CTACCAAACACACTTATGTT+GGG - chr3_3:70498813-70498832 Msa0468800:CDS 35.0%
! ATTTCTTTATGCAGGGTATC+CGG - chr3_3:70498840-70498859 Msa0468800:CDS 35.0%
AATCATGCATTTATGGCTAC+TGG - chr3_3:70498920-70498939 Msa0468800:CDS 35.0%
ATCATGCATTTATGGCTACT+GGG - chr3_3:70498921-70498940 Msa0468800:CDS 35.0%
AGACTAAAGAAAAACAGGGT+AGG + chr3_3:70499065-70499084 None:intergenic 35.0%
GATTGCAGAGAACTATTAGA+GGG + chr3_3:70499095-70499114 None:intergenic 35.0%
TGATTGCAGAGAACTATTAG+AGG + chr3_3:70499096-70499115 None:intergenic 35.0%
! GTTCTCTGCAATCACATTTT+AGG - chr3_3:70499102-70499121 Msa0468800:CDS 35.0%
GTAGGGCAAATACAATGTAA+GGG + chr3_3:70499201-70499220 None:intergenic 35.0%
TGTAGGGCAAATACAATGTA+AGG + chr3_3:70499202-70499221 None:intergenic 35.0%
TCAAATTTAAGGGATGTGGT+AGG - chr3_3:70499228-70499247 Msa0468800:five_prime_UTR 35.0%
TGCGCATTAATCACTTTGCT+TGG - chr3_3:70491583-70491602 Msa0468800:three_prime_UTR 40.0%
TTCATTCGGATCTGCAGTTT+CGG + chr3_3:70491758-70491777 None:intergenic 40.0%
! TCACTTATCGGAGCAGATTT+TGG - chr3_3:70491823-70491842 Msa0468800:three_prime_UTR 40.0%
! ATCGGAGCAGATTTTGGATT+CGG - chr3_3:70491829-70491848 Msa0468800:three_prime_UTR 40.0%
AGCTGCTGATGAAAATGAAG+AGG - chr3_3:70492131-70492150 Msa0468800:intron 40.0%
GAATTGAATAATGGCGTAGC+GGG - chr3_3:70492192-70492211 Msa0468800:intron 40.0%
AATTGAATAATGGCGTAGCG+GGG - chr3_3:70492193-70492212 Msa0468800:intron 40.0%
AATATCAGGTGTGCTAGCAT+AGG - chr3_3:70492280-70492299 Msa0468800:intron 40.0%
! TTCAGGAGCTTTTATCTGTG+AGG - chr3_3:70492378-70492397 Msa0468800:intron 40.0%
! TCAGGAGCTTTTATCTGTGA+GGG - chr3_3:70492379-70492398 Msa0468800:intron 40.0%
TATTGGACGAGTCTAGAAGT+GGG - chr3_3:70492564-70492583 Msa0468800:intron 40.0%
GAAAAGCTGTCTCATGTAGA+AGG - chr3_3:70492779-70492798 Msa0468800:intron 40.0%
ATTGGTAGAAGAGCTTGACA+AGG - chr3_3:70492814-70492833 Msa0468800:intron 40.0%
TAGAAGAGCTTGACAAGGAA+AGG - chr3_3:70492819-70492838 Msa0468800:intron 40.0%
AGAAGAGCTTGACAAGGAAA+GGG - chr3_3:70492820-70492839 Msa0468800:intron 40.0%
GAGACATTGAATACTGAGCT+TGG - chr3_3:70492851-70492870 Msa0468800:CDS 40.0%
AGTAGAACTTGAGCAGGAAA+AGG - chr3_3:70492883-70492902 Msa0468800:CDS 40.0%
CTTAGTATGGCTGTGACAAA+AGG - chr3_3:70492932-70492951 Msa0468800:CDS 40.0%
TATGGCTGTGACAAAAGGAA+AGG - chr3_3:70492937-70492956 Msa0468800:CDS 40.0%
! TGTGACAAAAGGAAAGGCAT+TGG - chr3_3:70492943-70492962 Msa0468800:CDS 40.0%
AGATTCACTAAAGACGTCTC+TGG - chr3_3:70492976-70492995 Msa0468800:CDS 40.0%
TAAGCATTTCTCAAGCTCAC+TGG + chr3_3:70493011-70493030 None:intergenic 40.0%
CTCCTCTTTAGTAAGTTCAG+CGG + chr3_3:70493068-70493087 None:intergenic 40.0%
CATTTCAGGCTGATCAAGTT+CGG + chr3_3:70493185-70493204 None:intergenic 40.0%
TCAGGCAAATCAAGCATTTC+AGG + chr3_3:70493199-70493218 None:intergenic 40.0%
ATTTGCCTGAGAGACTTCAA+TGG - chr3_3:70493209-70493228 Msa0468800:intron 40.0%
GATGACAGGAATAAACTGCA+GGG - chr3_3:70493238-70493257 Msa0468800:intron 40.0%
GAAGGAATCTCTATCTCTAC+TGG - chr3_3:70493285-70493304 Msa0468800:intron 40.0%
!! TTTGCTTTTGGTAGACTCAC+AGG - chr3_3:70493462-70493481 Msa0468800:CDS 40.0%
CAAGAACCGTCAGATTTCTT+TGG - chr3_3:70493546-70493565 Msa0468800:CDS 40.0%
GGTCTAAACATGGAAGATGA+AGG - chr3_3:70493607-70493626 Msa0468800:CDS 40.0%
AATATGAGATGCTCTGGTGA+GGG + chr3_3:70493707-70493726 None:intergenic 40.0%
TTGACCCCGAATTGTTTGAA+AGG - chr3_3:70493725-70493744 Msa0468800:CDS 40.0%
TGACCCCGAATTGTTTGAAA+GGG - chr3_3:70493726-70493745 Msa0468800:CDS 40.0%
GAACCCTTTCAAACAATTCG+GGG + chr3_3:70493732-70493751 None:intergenic 40.0%
TCTTCTGTATGTTAGGGATC+AGG - chr3_3:70493756-70493775 Msa0468800:CDS 40.0%
CTTCTGTATGTTAGGGATCA+GGG - chr3_3:70493757-70493776 Msa0468800:CDS 40.0%
AAACCTCTACGAGGATATAC+TGG - chr3_3:70493783-70493802 Msa0468800:CDS 40.0%
ACTGGCCAATGAGTTAAAAG+TGG - chr3_3:70493840-70493859 Msa0468800:CDS 40.0%
TTGTCCATGGCAGTTAAGAA+AGG - chr3_3:70493958-70493977 Msa0468800:CDS 40.0%
CTTTCCTTTCTTAACTGCCA+TGG + chr3_3:70493965-70493984 None:intergenic 40.0%
CATGGCAGTTAAGAAAGGAA+AGG - chr3_3:70493963-70493982 Msa0468800:CDS 40.0%
!! GAAAGGGATTGGTTCAAGAT+AGG - chr3_3:70493980-70493999 Msa0468800:CDS 40.0%
! CAGTGATTCGGAAAGAGATA+GGG - chr3_3:70494257-70494276 Msa0468800:CDS 40.0%
AGAGATAGGGACAATCAACA+AGG - chr3_3:70494270-70494289 Msa0468800:CDS 40.0%
AGAGATAGGGACAATCTACA+AGG - chr3_3:70494132-70494151 Msa0468800:intron 40.0%
TGGAATGCTTTCCAAATCAC+TGG + chr3_3:70494535-70494554 None:intergenic 40.0%
! AAAAGATCAGCCTCTAGCTT+TGG + chr3_3:70494555-70494574 None:intergenic 40.0%
! AAAGCTAGAGGCTGATCTTT+TGG - chr3_3:70494554-70494573 Msa0468800:CDS 40.0%
! CTTCCAGTTGATCCAGTTTT+TGG - chr3_3:70494669-70494688 Msa0468800:CDS 40.0%
TCACCAAAAACTGGATCAAC+TGG + chr3_3:70494675-70494694 None:intergenic 40.0%
!!! TCCAGTTTTTGGTGAACCTA+TGG - chr3_3:70494680-70494699 Msa0468800:CDS 40.0%
TCCATAGGTTCACCAAAAAC+TGG + chr3_3:70494684-70494703 None:intergenic 40.0%
! AGCCATTTCACCTTTTCCAT+AGG + chr3_3:70494699-70494718 None:intergenic 40.0%
AGAAGATAATCTTTGCCCGT+GGG + chr3_3:70494844-70494863 None:intergenic 40.0%
AAGAAGATAATCTTTGCCCG+TGG + chr3_3:70494845-70494864 None:intergenic 40.0%
ACTTGAAGACGCTTTATCAC+AGG - chr3_3:70494989-70495008 Msa0468800:intron 40.0%
TAGATCCTTTATGGTACTGC+TGG + chr3_3:70495141-70495160 None:intergenic 40.0%
!! ACTATCTCAGGTTGAGAGTA+AGG - chr3_3:70495169-70495188 Msa0468800:intron 40.0%
ACTGGAAGATGCATTGTTGA+AGG - chr3_3:70495325-70495344 Msa0468800:CDS 40.0%
TCATACATGGATGAGTTAGC+TGG - chr3_3:70495428-70495447 Msa0468800:CDS 40.0%
GATGAGTTAGCTGGAAAGAA+TGG - chr3_3:70495437-70495456 Msa0468800:CDS 40.0%
TGGATTCCTTAACGATCTTC+AGG - chr3_3:70495490-70495509 Msa0468800:CDS 40.0%
TAAGCACCTGAAGATCGTTA+AGG + chr3_3:70495499-70495518 None:intergenic 40.0%
CAATGAGATCCACATTCTTC+AGG + chr3_3:70495580-70495599 None:intergenic 40.0%
! AAGCCCCGTGTAATTTTCAT+GGG + chr3_3:70495846-70495865 None:intergenic 40.0%
! AAAGCCCCGTGTAATTTTCA+TGG + chr3_3:70495847-70495866 None:intergenic 40.0%
! TGAAAATTACACGGGGCTTT+TGG - chr3_3:70495847-70495866 Msa0468800:CDS 40.0%
! GAAAATTACACGGGGCTTTT+GGG - chr3_3:70495848-70495867 Msa0468800:CDS 40.0%
!! TGTGTTGTTCCCAATGCTTT+TGG - chr3_3:70495879-70495898 Msa0468800:CDS 40.0%
!! GTGTTGTTCCCAATGCTTTT+GGG - chr3_3:70495880-70495899 Msa0468800:CDS 40.0%
!! TGAACAGACCCAAAAGCATT+GGG + chr3_3:70495891-70495910 None:intergenic 40.0%
CTGGACAACAGAGAGATTAA+TGG - chr3_3:70496027-70496046 Msa0468800:CDS 40.0%
TCCATGGAGAGGAGAAATAA+AGG + chr3_3:70496163-70496182 None:intergenic 40.0%
! CTGTTTCCAGTAGTTTTCCA+TGG + chr3_3:70496179-70496198 None:intergenic 40.0%
TTCTACCAGTGAACTTCAGA+AGG - chr3_3:70496341-70496360 Msa0468800:CDS 40.0%
!! AACTTCCTTCTGAAGTTCAC+TGG + chr3_3:70496349-70496368 None:intergenic 40.0%
TAGCTTCTCAACCTCAAAAG+GGG + chr3_3:70496397-70496416 None:intergenic 40.0%
CTACTTGTTCATCTGCTTTG+TGG + chr3_3:70496422-70496441 None:intergenic 40.0%
! TGCTTTTGAATTGGCTACAG+AGG - chr3_3:70496596-70496615 Msa0468800:CDS 40.0%
AAATGCATGCACTGAGCTTA+AGG - chr3_3:70496677-70496696 Msa0468800:CDS 40.0%
ATGCACTGAGCTTAAGGATA+AGG - chr3_3:70496683-70496702 Msa0468800:CDS 40.0%
AGTGCTTCGTTGGAAAAAGA+AGG - chr3_3:70496771-70496790 Msa0468800:CDS 40.0%
AGCTTTCTGCCAATGCAAAA+AGG + chr3_3:70496886-70496905 None:intergenic 40.0%
CAACTGAGATGTTGAAAGGA+TGG + chr3_3:70496909-70496928 None:intergenic 40.0%
CTCTCAACTGAGATGTTGAA+AGG + chr3_3:70496913-70496932 None:intergenic 40.0%
GCAATCAATCCTCGAAACTA+AGG - chr3_3:70497096-70497115 Msa0468800:CDS 40.0%
TCTATCTACAACCCAGTTGT+TGG + chr3_3:70497251-70497270 None:intergenic 40.0%
! AAATCTAAGGCCCATGAACT+TGG - chr3_3:70497349-70497368 Msa0468800:CDS 40.0%
CTTCATATATGCTCCTTTCC+TGG + chr3_3:70497477-70497496 None:intergenic 40.0%
CGAGATAACTGAAGTTGAAG+AGG - chr3_3:70497519-70497538 Msa0468800:CDS 40.0%
GATCCAATATCAGGTTCTAC+AGG - chr3_3:70497583-70497602 Msa0468800:CDS 40.0%
TTATGTACACAGGGATCTCT+TGG - chr3_3:70497946-70497965 Msa0468800:CDS 40.0%
GACCATCTTGCTCTTGATAT+TGG - chr3_3:70498033-70498052 Msa0468800:CDS 40.0%
CACCAATATCAAGAGCAAGA+TGG + chr3_3:70498038-70498057 None:intergenic 40.0%
TCTTGCTCTTGATATTGGTG+TGG - chr3_3:70498038-70498057 Msa0468800:CDS 40.0%
GCTGATACCGATGATGATAA+AGG - chr3_3:70498084-70498103 Msa0468800:CDS 40.0%
TTCAAGTCTCTGAACACTTC+TGG - chr3_3:70498189-70498208 Msa0468800:CDS 40.0%
CTCATTGCAGATCGTATTGA+TGG - chr3_3:70498234-70498253 Msa0468800:CDS 40.0%
! CAGATCGTATTGATGGAATC+TGG - chr3_3:70498241-70498260 Msa0468800:CDS 40.0%
AGTGAGTGTAAGCATCTTCT+AGG + chr3_3:70498503-70498522 None:intergenic 40.0%
TAGAAGATGCTTACACTCAC+TGG - chr3_3:70498502-70498521 Msa0468800:CDS 40.0%
AGAAGATGCTTACACTCACT+GGG - chr3_3:70498503-70498522 Msa0468800:CDS 40.0%
CACTGGGAAAGATCCTTAAA+TGG - chr3_3:70498519-70498538 Msa0468800:CDS 40.0%
GCTACCAAACACACTTATGT+TGG - chr3_3:70498812-70498831 Msa0468800:CDS 40.0%
AAGCCCAACATAAGTGTGTT+TGG + chr3_3:70498819-70498838 None:intergenic 40.0%
TGGGCTTGATTTCTTTATGC+AGG - chr3_3:70498832-70498851 Msa0468800:CDS 40.0%
GGGCTTGATTTCTTTATGCA+GGG - chr3_3:70498833-70498852 Msa0468800:CDS 40.0%
ATGAGTCCTAATCTTGCTCT+GGG + chr3_3:70498888-70498907 None:intergenic 40.0%
AATGAGTCCTAATCTTGCTC+TGG + chr3_3:70498889-70498908 None:intergenic 40.0%
AGAGCAAGATTAGGACTCAT+TGG - chr3_3:70498888-70498907 Msa0468800:CDS 40.0%
TCATGCATTTATGGCTACTG+GGG - chr3_3:70498922-70498941 Msa0468800:CDS 40.0%
AGGCTTCATTCAGAAGCAAA+AGG + chr3_3:70499045-70499064 None:intergenic 40.0%
! GTCTGGGTTCAGTTTTTGAT+AGG - chr3_3:70499148-70499167 Msa0468800:five_prime_UTR 40.0%
ATTTAAGGGATGTGGTAGGT+AGG - chr3_3:70499232-70499251 Msa0468800:five_prime_UTR 40.0%
GAAACTGCAGATCCGAATGA+AGG - chr3_3:70491757-70491776 Msa0468800:three_prime_UTR 45.0%
!! TTAATGGGACTTGGTGAAGC+AGG - chr3_3:70491975-70491994 Msa0468800:three_prime_UTR 45.0%
ATTGAATAATGGCGTAGCGG+GGG - chr3_3:70492194-70492213 Msa0468800:intron 45.0%
TGAAGCTTGCAGGATCTCAT+TGG + chr3_3:70492453-70492472 None:intergenic 45.0%
! ATCCTTTTCATGTTGGGCCT+CGG + chr3_3:70492477-70492496 None:intergenic 45.0%
GTATTGGACGAGTCTAGAAG+TGG - chr3_3:70492563-70492582 Msa0468800:intron 45.0%
ACTTGGACAGTCATTCTCTG+AGG - chr3_3:70492661-70492680 Msa0468800:intron 45.0%
! TGGCTTGGATACTAATGAGC+AGG - chr3_3:70492685-70492704 Msa0468800:intron 45.0%
! AACATACTTGTTGGTGCTCG+TGG - chr3_3:70492716-70492735 Msa0468800:CDS 45.0%
AGCCGCTGAACTTACTAAAG+AGG - chr3_3:70493063-70493082 Msa0468800:intron 45.0%
GTTGGCCCAGAGTGAAAATA+TGG - chr3_3:70493087-70493106 Msa0468800:intron 45.0%
ACAAGCCATTGAAGTCTCTC+AGG + chr3_3:70493217-70493236 None:intergenic 45.0%
TGAGAGACTTCAATGGCTTG+TGG - chr3_3:70493216-70493235 Msa0468800:intron 45.0%
! TTCAATGGCTTGTGGATGAC+AGG - chr3_3:70493224-70493243 Msa0468800:intron 45.0%
GGATGACAGGAATAAACTGC+AGG - chr3_3:70493237-70493256 Msa0468800:intron 45.0%
CACTTTGCGTAATTCCAGGA+AGG + chr3_3:70493266-70493285 None:intergenic 45.0%
CCTTCACTTTGCGTAATTCC+AGG + chr3_3:70493270-70493289 None:intergenic 45.0%
CCTGGAATTACGCAAAGTGA+AGG - chr3_3:70493267-70493286 Msa0468800:intron 45.0%
TCAGATGATGAAACAGGCTC+TGG + chr3_3:70493316-70493335 None:intergenic 45.0%
CAATATGAGATGCTCTGGTG+AGG + chr3_3:70493708-70493727 None:intergenic 45.0%
CTTCCAGTATATCCTCGTAG+AGG + chr3_3:70493789-70493808 None:intergenic 45.0%
GAAAGACCTTGAACGATCAG+AGG - chr3_3:70493909-70493928 Msa0468800:CDS 45.0%
TCTTCTCCTCTGATCGTTCA+AGG + chr3_3:70493918-70493937 None:intergenic 45.0%
CTCAGAGATTGAGCAGTTGA+AGG - chr3_3:70494173-70494192 Msa0468800:CDS 45.0%
CCTATCTCTTTCCGAATCAC+TGG + chr3_3:70494259-70494278 None:intergenic 45.0%
! CCAGTGATTCGGAAAGAGAT+AGG - chr3_3:70494256-70494275 Msa0468800:CDS 45.0%
CTCAGAGATCGATCAGTTGA+AGG - chr3_3:70494311-70494330 Msa0468800:CDS 45.0%
CTCAGAGATTGAGCAGTTGA+AGG - chr3_3:70494173-70494192 Msa0468800:CDS 45.0%
!! GGAAAGCATTCCAAAGCTAG+AGG - chr3_3:70494542-70494561 Msa0468800:CDS 45.0%
! AGAGTGATGGAGTGCATTGA+TGG - chr3_3:70494639-70494658 Msa0468800:CDS 45.0%
! GAAAAGGTGAAATGGCTTGC+TGG - chr3_3:70494702-70494721 Msa0468800:CDS 45.0%
TGTAGAGCAACAGTTGCAGT+TGG - chr3_3:70494758-70494777 Msa0468800:CDS 45.0%
!! GCAACAGTTGCAGTTGGTAA+AGG - chr3_3:70494764-70494783 Msa0468800:CDS 45.0%
!! ACAGTTGCAGTTGGTAAAGG+AGG - chr3_3:70494767-70494786 Msa0468800:CDS 45.0%
GTGGGAGCTTACAGTTTCTT+GGG + chr3_3:70494826-70494845 None:intergenic 45.0%
CAAGAAACTGTAAGCTCCCA+CGG - chr3_3:70494825-70494844 Msa0468800:CDS 45.0%
AAGAAACTGTAAGCTCCCAC+GGG - chr3_3:70494826-70494845 Msa0468800:CDS 45.0%
GAGTTAGAGATGAAGCAGAC+AGG - chr3_3:70495093-70495112 Msa0468800:intron 45.0%
GCAGACAAGAGAACTATCAG+AGG - chr3_3:70495115-70495134 Msa0468800:intron 45.0%
GAGCGAAGATATCTCCTGTT+TGG + chr3_3:70495393-70495412 None:intergenic 45.0%
ATGTGAGACCCTGAAGAATG+TGG - chr3_3:70495568-70495587 Msa0468800:CDS 45.0%
AGAATGCTACCTCCATCTCA+AGG + chr3_3:70495655-70495674 None:intergenic 45.0%
! CTGAACAGACCCAAAAGCAT+TGG + chr3_3:70495892-70495911 None:intergenic 45.0%
! GCCTTTATTTCTCCTCTCCA+TGG - chr3_3:70496159-70496178 Msa0468800:CDS 45.0%
TCCTCTCCATGGAAAACTAC+TGG - chr3_3:70496170-70496189 Msa0468800:CDS 45.0%
! TCCAGTAGTTTTCCATGGAG+AGG + chr3_3:70496174-70496193 None:intergenic 45.0%
AATGGCTATTGTTGAGCACG+TGG - chr3_3:70496209-70496228 Msa0468800:CDS 45.0%
CACCAAAATCTTGGGCAACT+TGG - chr3_3:70496369-70496388 Msa0468800:CDS 45.0%
! AGCCAAGTTGCCCAAGATTT+TGG + chr3_3:70496374-70496393 None:intergenic 45.0%
ATCAATGCACAGTGCTTCGT+TGG - chr3_3:70496761-70496780 Msa0468800:CDS 45.0%
TTTCAAGGGCCTTAGTTTCG+AGG + chr3_3:70497108-70497127 None:intergenic 45.0%
!!! ATGTTTTGGGAGCCAACAAC+TGG - chr3_3:70497236-70497255 Msa0468800:CDS 45.0%
!!! TGTTTTGGGAGCCAACAACT+GGG - chr3_3:70497237-70497256 Msa0468800:CDS 45.0%
TTCTCAGCCAGAAATTGTCC+AGG - chr3_3:70497456-70497475 Msa0468800:CDS 45.0%
AGCCAGAAATTGTCCAGGAA+AGG - chr3_3:70497461-70497480 Msa0468800:CDS 45.0%
CTCCTTTCCTGGACAATTTC+TGG + chr3_3:70497466-70497485 None:intergenic 45.0%
GGTCCTGTAGAACCTGATAT+TGG + chr3_3:70497589-70497608 None:intergenic 45.0%
CACGTGCGAAATATGCGAAA+AGG - chr3_3:70498003-70498022 Msa0468800:CDS 45.0%
GCAATGAGCTTTCCTTGCTT+CGG + chr3_3:70498222-70498241 None:intergenic 45.0%
CTAGGCAAAACACCACCTTA+AGG + chr3_3:70498431-70498450 None:intergenic 45.0%
ATTCATAAGAGCCCCACTAC+CGG + chr3_3:70498862-70498881 None:intergenic 45.0%
AATCGTCCCAGAGCAAGATT+AGG - chr3_3:70498879-70498898 Msa0468800:CDS 45.0%
GGATGTGGTAGGTAGGAAAT+AGG - chr3_3:70499239-70499258 Msa0468800:five_prime_UTR 45.0%
!!! TTTAATTTTTAATCAATTAA+TGG - chr3_3:70491959-70491978 Msa0468800:three_prime_UTR 5.0%
!!! TTAATTTTTAATCAATTAAT+GGG - chr3_3:70491960-70491979 Msa0468800:three_prime_UTR 5.0%
!!! TTTTGTTAATTTATTTAATT+TGG - chr3_3:70492350-70492369 Msa0468800:intron 5.0%
! TCGAACGTGATTAGCTCGTC+GGG + chr3_3:70492084-70492103 None:intergenic 50.0%
! GTCGAACGTGATTAGCTCGT+CGG + chr3_3:70492085-70492104 None:intergenic 50.0%
GACGAGCTAATCACGTTCGA+CGG - chr3_3:70492084-70492103 Msa0468800:intron 50.0%
CACGTTCGACGGTAAGCAAA+AGG - chr3_3:70492095-70492114 Msa0468800:intron 50.0%
ATCCGAGGCCCAACATGAAA+AGG - chr3_3:70492472-70492491 Msa0468800:intron 50.0%
GAGGCCCAACATGAAAAGGA+TGG - chr3_3:70492476-70492495 Msa0468800:intron 50.0%
!! GGACAGTCATTCTCTGAGGT+TGG - chr3_3:70492665-70492684 Msa0468800:intron 50.0%
!! GTCATTCTCTGAGGTTGGCT+TGG - chr3_3:70492670-70492689 Msa0468800:intron 50.0%
! ATACTTGTTGGTGCTCGTGG+TGG - chr3_3:70492719-70492738 Msa0468800:CDS 50.0%
! TACTTGTTGGTGCTCGTGGT+GGG - chr3_3:70492720-70492739 Msa0468800:CDS 50.0%
GTTGCTGGAGCTCAAGAGAA+AGG - chr3_3:70492742-70492761 Msa0468800:CDS 50.0%
AGAGCTTGACAAGGAAAGGG+CGG - chr3_3:70492823-70492842 Msa0468800:intron 50.0%
TCACTAAAGACGTCTCTGGC+TGG - chr3_3:70492980-70492999 Msa0468800:intron 50.0%
GGGGTCAATATGAGATGCTC+TGG + chr3_3:70493713-70493732 None:intergenic 50.0%
TCAGGGCTTAAACCTCTACG+AGG - chr3_3:70493774-70493793 Msa0468800:CDS 50.0%
GAACGATCAGAGGAGAAGAC+TGG - chr3_3:70493919-70493938 Msa0468800:CDS 50.0%
AGGAGAAGACTGGCATGCTT+CGG - chr3_3:70493929-70493948 Msa0468800:CDS 50.0%
CTCAGAGATTGAGCAGTTGC+AGG - chr3_3:70494035-70494054 Msa0468800:CDS 50.0%
!! GTTGCAGTTGGTAAAGGAGG+AGG - chr3_3:70494770-70494789 Msa0468800:CDS 50.0%
CGTGGGAGCTTACAGTTTCT+TGG + chr3_3:70494827-70494846 None:intergenic 50.0%
TCTTTCCGAGGAGAAAGAGC+AGG - chr3_3:70495031-70495050 Msa0468800:intron 50.0%
AGAGGCCAGCAGTACCATAA+AGG - chr3_3:70495133-70495152 Msa0468800:intron 50.0%
! CCTTAGCGGACAGGGAAATA+TGG + chr3_3:70495619-70495638 None:intergenic 50.0%
CCATATTTCCCTGTCCGCTA+AGG - chr3_3:70495616-70495635 Msa0468800:CDS 50.0%
! TCCAGAATCCTTAGCGGACA+GGG + chr3_3:70495627-70495646 None:intergenic 50.0%
TGTCCGCTAAGGATTCTGGA+GGG - chr3_3:70495627-70495646 Msa0468800:CDS 50.0%
TTCTCAGAGGTGGATCTTCC+TGG + chr3_3:70495969-70495988 None:intergenic 50.0%
ACCGTTATCTCCTGTCCCAT+CGG - chr3_3:70497975-70497994 Msa0468800:CDS 50.0%
TCTGGATTCGTACCGAAGCA+AGG - chr3_3:70498207-70498226 Msa0468800:CDS 50.0%
GCAGGGTATGTTACCATCCT+TGG - chr3_3:70498576-70498595 Msa0468800:intron 50.0%
! TTATGCAGGGTATCCGGTAG+TGG - chr3_3:70498846-70498865 Msa0468800:CDS 50.0%
! TATGCAGGGTATCCGGTAGT+GGG - chr3_3:70498847-70498866 Msa0468800:CDS 50.0%
! CGAACGTGATTAGCTCGTCG+GGG + chr3_3:70492083-70492102 None:intergenic 55.0%
GGAACAGTTGCGGGTGAAGT+TGG - chr3_3:70492221-70492240 Msa0468800:intron 55.0%
GATCCTGCAAGCTTCATCCG+AGG - chr3_3:70492457-70492476 Msa0468800:intron 55.0%
! TAAACTGCAGGGTGCCTTCC+TGG - chr3_3:70493249-70493268 Msa0468800:intron 55.0%
GGAGAAGACTGGCATGCTTC+GGG - chr3_3:70493930-70493949 Msa0468800:CDS 55.0%
GCTTCGGGACAAGTTGTCCA+TGG - chr3_3:70493945-70493964 Msa0468800:CDS 55.0%
CTGAGCCTGCTCTTTCTCCT+CGG + chr3_3:70495039-70495058 None:intergenic 55.0%
TCCCTGTCCGCTAAGGATTC+TGG - chr3_3:70495623-70495642 Msa0468800:CDS 55.0%
! CTCCAGAATCCTTAGCGGAC+AGG + chr3_3:70495628-70495647 None:intergenic 55.0%
CTGTCCGCTAAGGATTCTGG+AGG - chr3_3:70495626-70495645 Msa0468800:CDS 55.0%
GTGCCCTCCAGAATCCTTAG+CGG + chr3_3:70495633-70495652 None:intergenic 55.0%
!! TTCTGGAGGGCACCTTGAGA+TGG - chr3_3:70495640-70495659 Msa0468800:CDS 55.0%
! GCAACTTGGCTCCCCTTTTG+AGG - chr3_3:70496383-70496402 Msa0468800:CDS 55.0%
! GAAGCACCTTCATTGCCTGC+TGG - chr3_3:70497493-70497512 Msa0468800:CDS 55.0%
TCAGTTATCTCGGAGCCAGC+AGG + chr3_3:70497511-70497530 None:intergenic 55.0%
GCCGATGGGACAGGAGATAA+CGG + chr3_3:70497979-70497998 None:intergenic 55.0%
! ATGCAGGGTATCCGGTAGTG+GGG - chr3_3:70498848-70498867 Msa0468800:CDS 55.0%
CGAGGAGAAAGAGCAGGCTC+AGG - chr3_3:70495037-70495056 Msa0468800:intron 60.0%
!! TGGAGGGCACCTTGAGATGG+AGG - chr3_3:70495643-70495662 Msa0468800:CDS 60.0%
TCGGAGCCAGCAGGCAATGA+AGG + chr3_3:70497502-70497521 None:intergenic 60.0%
TTCGCACGTGAGCAGCCGAT+GGG + chr3_3:70497993-70498012 None:intergenic 60.0%
TTTCGCACGTGAGCAGCCGA+TGG + chr3_3:70497994-70498013 None:intergenic 60.0%
! TAATGGCGTAGCGGGGGAGC+AGG - chr3_3:70492200-70492219 Msa0468800:intron 65.0%
CGGGGGAGCAGGAACAGTTG+CGG - chr3_3:70492211-70492230 Msa0468800:intron 65.0%
GGGGGAGCAGGAACAGTTGC+GGG - chr3_3:70492212-70492231 Msa0468800:intron 65.0%
GGGCCTCGGATGAAGCTTGC+AGG + chr3_3:70492463-70492482 None:intergenic 65.0%
!! TGGTGCTCGTGGTGGGTTGC+TGG - chr3_3:70492727-70492746 Msa0468800:CDS 65.0%
ACGTGAGCAGCCGATGGGAC+AGG + chr3_3:70497988-70498007 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 70491575 70499381 70491575 ID=Msa0468800;Name=Msa0468800
chr3_3 mRNA 70491575 70499381 70491575 ID=Msa0468800-mRNA-1;Parent=Msa0468800;Name=Msa0468800-mRNA-1;_AED=0.05;_eAED=0.05;_QI=234|1|0.87|1|1|1|8|425|1822
chr3_3 exon 70491575 70492102 70491575 ID=Msa0468800-mRNA-1:exon:17117;Parent=Msa0468800-mRNA-1
chr3_3 exon 70492694 70492775 70492694 ID=Msa0468800-mRNA-1:exon:17116;Parent=Msa0468800-mRNA-1
chr3_3 exon 70492851 70492998 70492851 ID=Msa0468800-mRNA-1:exon:17115;Parent=Msa0468800-mRNA-1
chr3_3 exon 70493416 70494056 70493416 ID=Msa0468800-mRNA-1:exon:17114;Parent=Msa0468800-mRNA-1
chr3_3 exon 70494164 70494986 70494164 ID=Msa0468800-mRNA-1:exon:17113;Parent=Msa0468800-mRNA-1
chr3_3 exon 70495292 70498573 70495292 ID=Msa0468800-mRNA-1:exon:17112;Parent=Msa0468800-mRNA-1
chr3_3 exon 70498669 70498959 70498669 ID=Msa0468800-mRNA-1:exon:17111;Parent=Msa0468800-mRNA-1
chr3_3 exon 70499049 70499381 70499049 ID=Msa0468800-mRNA-1:exon:17110;Parent=Msa0468800-mRNA-1
chr3_3 five_prime_UTR 70499148 70499381 70499148 ID=Msa0468800-mRNA-1:five_prime_utr;Parent=Msa0468800-mRNA-1
chr3_3 CDS 70499049 70499147 70499049 ID=Msa0468800-mRNA-1:cds;Parent=Msa0468800-mRNA-1
chr3_3 CDS 70498669 70498959 70498669 ID=Msa0468800-mRNA-1:cds;Parent=Msa0468800-mRNA-1
chr3_3 CDS 70495292 70498573 70495292 ID=Msa0468800-mRNA-1:cds;Parent=Msa0468800-mRNA-1
chr3_3 CDS 70494164 70494986 70494164 ID=Msa0468800-mRNA-1:cds;Parent=Msa0468800-mRNA-1
chr3_3 CDS 70493416 70494056 70493416 ID=Msa0468800-mRNA-1:cds;Parent=Msa0468800-mRNA-1
chr3_3 CDS 70492851 70492998 70492851 ID=Msa0468800-mRNA-1:cds;Parent=Msa0468800-mRNA-1
chr3_3 CDS 70492694 70492775 70492694 ID=Msa0468800-mRNA-1:cds;Parent=Msa0468800-mRNA-1
chr3_3 CDS 70492000 70492102 70492000 ID=Msa0468800-mRNA-1:cds;Parent=Msa0468800-mRNA-1
chr3_3 three_prime_UTR 70491575 70491999 70491575 ID=Msa0468800-mRNA-1:three_prime_utr;Parent=Msa0468800-mRNA-1
Gene Sequence

>Msa0468800

ATGTCTGAGAATAATCACTTATCGGAGCAGATTTTGGATTCGGATTCTCAATCAAATGGGGTTAATACCGAATCAAACATTGATACTTATCAAAATCAGGTAACACATGTTGATCTAAAAGATGAAGTTTTGGGAGAATCTGAAGATGTTAAATCTACAGAGGATAACATGTTTGTTGATTGCCCCGACGAGCTAATCACGTTCGACGGTAAGCAAAAGGAAGAAGAAGCTGTAGCTGCTGATGAAAATGAAGAGGAAAGTCAAATTATGCATCAACAACAGAGTCATTTTGGTGAATTGAATAATGGCGTAGCGGGGGAGCAGGAACAGTTGCGGGTGAAGTTGGAGAATGCTGTTGCTGAGAAAGAAAGTGTTGTGAATGAATATCAGGAGCTTTTATCTGTGAGGGATCGCGAGATAGAGAATCTAAATGCAAAGGTTTCACAATTAATGATATCCAATGAGATCCTGCAAGCTTCATCCGAGGCCCAACATGAAAAGGATGGTGATATTGACAATGTGATAGATAGGACGATATCCTCTCTTGCAAGTGTTGTTAATCAAGGGCAAGTATTGGACGAGTCTAGAAGTGGGAAAATAGTATATATCGAGGAAAGCACTGCACTCTTGATTGAAAAGTATAATCAAATGCTTTCTGATATTTATCAACTTGGACAGTCATTCTCTGAGGTTGGCTTGGATACTAATGAGCAGGAATTTGGAAACATACTTGTTGGTGCTCGTGGTGGGTTGCTGGAGCTCAAGAGAAAGGAAGATGATTTGATTGAAAAGCTGTCTCATGTAGAAGGCGAAAATCAGAAATTGGTAGAAGAGCTTGACAAGGAAAGGGCGGTGATAGAGACATTGAATACTGAGCTTGGAAATATAAAAGTAGAACTTGAGCAGGAAAAGGTCAAATCTGCTAATACCAAAGAGAAACTTAGTATGGCTGTGACAAAAGGAAAGGCATTGGTACAACAGCGAGATTCACTAAAGACGTCTCTGGCTGGTAAATCCAGTGAGCTTGAGAAATGCTTAATTGAATTGCAGGAGAAGTCAGCTGCACTAGAAGCCGCTGAACTTACTAAAGAGGAGTTGGCCCAGAGTGAAAATATGGTTGCATCCCTGAATACTTCACTACAACAAAATAATTCCATTTTTGAGCAAGTACAAGAAATCTTGTCTCATGCCGAACTTGATCAGCCTGAAATGCTTGATTTGCCTGAGAGACTTCAATGGCTTGTGGATGACAGGAATAAACTGCAGGGTGCCTTCCTGGAATTACGCAAAGTGAAGGAATCTCTATCTCTACTGGACTTACCAGAGCCTGTTTCATCATCTGATCTAGAATCACAAATGAACTGGCTTATAGATTCTTCTCACAAGGCCCGCAATGATATTTATGCTCTACAGGAAGAAATTTCTACAATCAAGGAAGCATCCGTCAACTGTATTGATCATTTGAGTATTTTGCTTTTGGTAGACTCACAGGAAAAAGATTACCTTCAGTCTGAATTAACAGATTTGAGGTTCGAATATGGAGAACTTGTTGGCAAGAACCGTCAGATTTCTTTGGAGAAAGATCAGATTGTGAAAATGTTAGTAGATTTTTCTGGTCTAAACATGGAAGATGAAGGAATTGATCAATTCTCTTCTAACACTTTGATGATCATTGACTTATGCTTTCAAAAAGTAAAAGGGCAGAATGGTACCCTCACCAGAGCATCTCATATTGACCCCGAATTGTTTGAAAGGGTTCAAAGTCTTCTGTATGTTAGGGATCAGGGCTTAAACCTCTACGAGGATATACTGGAAGAAGATATTCTAATTAGATCAGATGTGAATAAACTGGCCAATGAGTTAAAAGTGGTATCTGACGAAGTTATAGCACTGAAAGAAGAAAGGAGTTCTCTGCTGAAAGACCTTGAACGATCAGAGGAGAAGACTGGCATGCTTCGGGACAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGATTGGTTCAAGATAGGGACAATCTAAAAGGTCTTATAAACGAAAAAAACTCAGAGATTGAGCAGTTGCAGGTTGATTTGCAGAAGCAAGAATCTGTAGTTTCTGAATACAAGGATGAGATCAATAGATTGTCCATTGATTTGGAAAGAGATAGGGACAATCTACAAAGTCTTATAAATGAAAAGAACTCAGAGATTGAGCAGTTGAAGGTTGATTTGCAGAAGCAAGAATCTATAGTTTATGAATACAAGGATGAGATCAATAGATTGTCCAGTGATTCGGAAAGAGATAGGGACAATCAACAAGGTCTCATAAATGAAAAGAACTCAGAGATCGATCAGTTGAAGGTTGATTTGCAGAAGCAAGAGTCTGTAGTTTCTGAATACAAGGACGAGATCAATAGATTGTCTAATGATTCGGAAAGAGATAGGGACAATCTACAAGGTCTCATAAACGAAAAGAACTCAGAGATTGAGCAGTTGAAGGTTGATTTGCAGAAGCAAGAGTCTGTAGTTTCTGAATACAATGATGAGATCAATAGATTGTCCAGTGATTTGGAAAGCATTCCAAAGCTAGAGGCTGATCTTTTGGAAATAAAAAGGGAAAGGAATCAGTTTGAACAGTTCTTGATGGAGAGCAATAACATGTTACAGAGAGTGATGGAGTGCATTGATGGTATTGCTCTTCCAGTTGATCCAGTTTTTGGTGAACCTATGGAAAAGGTGAAATGGCTTGCTGGTTATGTCAATGAATGCCAAGAAGCTAAGATACATGTAGAGCAACAGTTGCAGTTGGTAAAGGAGGAGGCCAGTATACTTGAAGCTAAATTGGCAGAAGCCCAAGAAACTGTAAGCTCCCACGGGCAAAGATTATCTTCTTCAGAGGGAAGTGTTTCTCAACTTGCTGAAGAAAAGGCAGAGTTAGAACACGAGAAAGAAAAAGTTGTGGAAGAGTTGCAGAAAGTTAAAGAAAAAGTTGCTGAAGTTTGCAGTACTAGTAAGTCACTTGAAGACGCTTTATCACAGGCAGAAAAAGATATTTCTGTTCTTTCCGAGGAGAAAGAGCAGGCTCAGGTATCTAGAGTTGCTGCAGAGACAGAGTTAGAGAGAGTTAGAGATGAAGCAGACAGGCAGACAAGAGAACTATCAGAGGCCAGCAGTACCATAAAGGATCTAGAAGTTGAACTATCTCAGGTTGAGAGTAAGGTGAATTTATTGACTGAAAAGAATAATGCTGATCAAGTTGTCAAGACTGAATTGGAAAATGAATTGAAGAAGCTGCAAGATGAAGCAGCAAATAATGCTAGCAAGTTGGTAGGTTCCTCTGAAACTATCAAATCACTGGAAGATGCATTGTTGAAGGCGAAAGATGATATTTCTACCCTGGAAGATGCAAATAAAATTGCCAAACAGGAGATATCTTCGCTCAATTTAAAGTTAAATTCATACATGGATGAGTTAGCTGGAAAGAATGGCAGCTTAGAGAACAAATCTCTAGAGCTCATTGGATTCCTTAACGATCTTCAGGTGCTTATGAAAGACAATACTCTATTTCTCAGGATAAAACAATGCTTTGAGAGAAAATGTGAGACCCTGAAGAATGTGGATCTCATTGTGAGCAAAGTAAGAAACCATATTTCCCTGTCCGCTAAGGATTCTGGAGGGCACCTTGAGATGGAGGAAGATCCACCTCTGAGAAAATCTTTTTCAGATGGCCTTGAAAAATTTGAAGTCAAACTGGACAACAGAGAGATTAATGGAATTGATATTGACACCATAATTTCATCATTTGGAAAGATTGTGAAAGGATTTCAGTTGAGAAATGAACATATTGCAGATAAGTTTGATGAATTTTCTGATTCTATCGATGCCTTTATTTCTCCTCTCCATGGAAAACTACTGGAAACAGAGTCTAATATAATGGCTATTGTTGAGCACGTGGAAGTTATGAAAGAAAAGGCAAATAGCGTGACAAAGTTGAACGAAGAAAAGGATAATATGATTGCCACTTTAGAGAACGATATCAGTTTATTGCTGTCTGCATGCACTGATTCTACCAGTGAACTTCAGAAGGAAGTTCACCAAAATCTTGGGCAACTTGGCTCCCCTTTTGAGGTTGAGAAGCTAAACCACAAAGCAGATGAACAAGTAGAACATCATAAGAACAACACATATGCAGACGCTTCAAGAAAGTTGATAAATGCTTCTGGAGAAGTTCAAACTTTGATTAGACAGTTCAAATTTAAAAGTGAGCAAGTAGATGCAACAGTTAGAGATTTGCAGACCAAATTGAACGAAACAACAGTTGCTTTTGAATTGGCTACAGAGGAGAGAGACTTAAATAAGAACAAAGTTTTGCAGTTGGAGTCTGATATTCAATCACTCGAAAATGCATGCACTGAGCTTAAGGATAAGGTAGAGCATTATCATGTTCTAGAAGAAAAATTAAAGGACAAAGAGGCAGAGATTTCATCAATGCACAGTGCTTCGTTGGAAAAAGAAGAAAGCTCCATCCTTTCAACATCTCAGTTGAGAGATATCTTTGACGAGATAGATAGGATTGAAATCCCTATTGTAGAATCTGAAGATAGTATGGAGTCACATACTTCAGACCCTGTGAAGAAGCTCTTTTACATTATTGATAGTGTTACTAGGTTGCATCATCAAATAAATTCTCTATCTCATGATAAAAAAGAGACGCAATCAATCCTCGAAACTAAGGCCCTTGAAATTAAGGATCTAAAGGAAGAAGTTAAACAACTCAATAGACACTGTGAAGACTCAAAAATGATCAAGAATGAACTATCTGAATTGACGTCTGTCTTAGAAAAAATAATAGATGTTTTGGGAGCCAACAACTGGGTTGTAGATAGACAATCTAAAGGTTTTAGAGAATTATTGCCGCAATTGGAAAAGCATATCATTGCCATTCTTTCAGAATCTGAAAATTCAAAATCTAAGGCCCATGAACTTGGTATTAAATTAGTTGGAAGTCAGAAGGTTATTGATGACTTAACGACCAAGGTTAAATTACTTGAAGATTCGATTCAAGATAGGATTTCTCAGCCAGAAATTGTCCAGGAAAGGAGCATATATGAAGCACCTTCATTGCCTGCTGGCTCCGAGATAACTGAAGTTGAAGAGGGATCTCTTGGCAAAAAACCGTTATCTCCTGTCCCATCGGCTGCTCACGTGCGAAATATGCGAAAAGGATCTAGTGACCATCTTGCTCTTGATATTGGTGTGGAGTCTGATCATTTAATCAACAGTGCTGATACCGATGATGATAAAGGTCATGCGTTCAAGTCTCTGAACACTTCTGGATTCGTACCGAAGCAAGGAAAGCTCATTGCAGATCGTATTGATGGAATCTGGGTATCCGGTAGTGGGGCTCTTATGAATCGTCCCAGAGCAAGATTAGGACTCATTGGCTATTTGCTAATCATGCATTTATGGCTACTGGGGACGATATTGTAG
Protein sequence

>Msa0468800

MSENNHLSEQILDSDSQSNGVNTESNIDTYQNQVTHVDLKDEVLGESEDVKSTEDNMFVDCPDELITFDGKQKEEEAVAADENEEESQIMHQQQSHFGELNNGVAGEQEQLRVKLENAVAEKESVVNEYQELLSVRDREIENLNAKVSQLMISNEILQASSEAQHEKDGDIDNVIDRTISSLASVVNQGQVLDESRSGKIVYIEESTALLIEKYNQMLSDIYQLGQSFSEVGLDTNEQEFGNILVGARGGLLELKRKEDDLIEKLSHVEGENQKLVEELDKERAVIETLNTELGNIKVELEQEKVKSANTKEKLSMAVTKGKALVQQRDSLKTSLAGKSSELEKCLIELQEKSAALEAAELTKEELAQSENMVASLNTSLQQNNSIFEQVQEILSHAELDQPEMLDLPERLQWLVDDRNKLQGAFLELRKVKESLSLLDLPEPVSSSDLESQMNWLIDSSHKARNDIYALQEEISTIKEASVNCIDHLSILLLVDSQEKDYLQSELTDLRFEYGELVGKNRQISLEKDQIVKMLVDFSGLNMEDEGIDQFSSNTLMIIDLCFQKVKGQNGTLTRASHIDPELFERVQSLLYVRDQGLNLYEDILEEDILIRSDVNKLANELKVVSDEVIALKEERSSLLKDLERSEEKTGMLRDKLSMAVKKGKGLVQDRDNLKGLINEKNSEIEQLQVDLQKQESVVSEYKDEINRLSIDLERDRDNLQSLINEKNSEIEQLKVDLQKQESIVYEYKDEINRLSSDSERDRDNQQGLINEKNSEIDQLKVDLQKQESVVSEYKDEINRLSNDSERDRDNLQGLINEKNSEIEQLKVDLQKQESVVSEYNDEINRLSSDLESIPKLEADLLEIKRERNQFEQFLMESNNMLQRVMECIDGIALPVDPVFGEPMEKVKWLAGYVNECQEAKIHVEQQLQLVKEEASILEAKLAEAQETVSSHGQRLSSSEGSVSQLAEEKAELEHEKEKVVEELQKVKEKVAEVCSTSKSLEDALSQAEKDISVLSEEKEQAQVSRVAAETELERVRDEADRQTRELSEASSTIKDLEVELSQVESKVNLLTEKNNADQVVKTELENELKKLQDEAANNASKLVGSSETIKSLEDALLKAKDDISTLEDANKIAKQEISSLNLKLNSYMDELAGKNGSLENKSLELIGFLNDLQVLMKDNTLFLRIKQCFERKCETLKNVDLIVSKVRNHISLSAKDSGGHLEMEEDPPLRKSFSDGLEKFEVKLDNREINGIDIDTIISSFGKIVKGFQLRNEHIADKFDEFSDSIDAFISPLHGKLLETESNIMAIVEHVEVMKEKANSVTKLNEEKDNMIATLENDISLLLSACTDSTSELQKEVHQNLGQLGSPFEVEKLNHKADEQVEHHKNNTYADASRKLINASGEVQTLIRQFKFKSEQVDATVRDLQTKLNETTVAFELATEERDLNKNKVLQLESDIQSLENACTELKDKVEHYHVLEEKLKDKEAEISSMHSASLEKEESSILSTSQLRDIFDEIDRIEIPIVESEDSMESHTSDPVKKLFYIIDSVTRLHHQINSLSHDKKETQSILETKALEIKDLKEEVKQLNRHCEDSKMIKNELSELTSVLEKIIDVLGANNWVVDRQSKGFRELLPQLEKHIIAILSESENSKSKAHELGIKLVGSQKVIDDLTTKVKLLEDSIQDRISQPEIVQERSIYEAPSLPAGSEITEVEEGSLGKKPLSPVPSAAHVRNMRKGSSDHLALDIGVESDHLINSADTDDDKGHAFKSLNTSGFVPKQGKLIADRIDGIWVSGSGALMNRPRARLGLIGYLLIMHLWLLGTIL*