Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374770 | XP_013461353.1 | 96.538 | 260 | 9 | 0 | 1 | 260 | 1 | 260 | 0.0 | 522 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374770 | sp|Q54GN8|NSA2_DICDI | 73.077 | 260 | 70 | 0 | 1 | 260 | 1 | 260 | 3.89e-144 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374770 | I3STA8 | 96.538 | 260 | 9 | 0 | 1 | 260 | 1 | 260 | 0.0 | 522 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0230490 | Msa0374770 | 0.807453 | 5.017797e-50 | -8.615850e-47 |
| Msa0374770 | Msa0526540 | 0.801947 | 7.080729e-49 | -8.615850e-47 |
| Msa0374770 | Msa0576940 | 0.800698 | 1.275325e-48 | -8.615850e-47 |
| Msa0374770 | Msa1363330 | 0.801086 | 1.062659e-48 | -8.615850e-47 |
| Msa0374770 | Msa1386600 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374770 | MtrunA17_Chr3g0125641 | 96.538 | 260 | 9 | 0 | 1 | 260 | 1 | 260 | 0.0 | 522 |
| Msa0374770 | MtrunA17_Chr1g0177701 | 91.154 | 260 | 23 | 0 | 1 | 260 | 1 | 260 | 3.26e-179 | 493 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374770 | AT5G06360.1 | 85.769 | 260 | 37 | 0 | 1 | 260 | 1 | 260 | 2.15e-170 | 471 |
Find 95 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGTTCCTGCATATCTTT+TGG | 0.216509 | 3_1:+74302005 | Msa0374770:CDS |
| GGAACAGGCCCTTGGTATTA+AGG | 0.244745 | 3_1:+74301331 | Msa0374770:intron |
| ACATTCAATCTAGAAATTAT+TGG | 0.300648 | 3_1:+74302998 | Msa0374770:CDS |
| GAAGGAGAAGGCTGGGAAAT+GGG | 0.301706 | 3_1:+74302176 | Msa0374770:CDS |
| GGAAGGAGAAGGCTGGGAAA+TGG | 0.307698 | 3_1:+74302175 | Msa0374770:CDS |
| CAGGTAAATGTTAGCGAACT+TGG | 0.311505 | 3_1:+74303191 | Msa0374770:intron |
| TTTCTGGGTTGTTGGTAACC+TGG | 0.337046 | 3_1:-74303347 | None:intergenic |
| TTGAATGTGCATTTAAGTTC+AGG | 0.355975 | 3_1:-74302983 | None:intergenic |
| CGAATGAACCGCTCATACTT+TGG | 0.362723 | 3_1:-74302920 | None:intergenic |
| AGGTGTACATAGGGCCATTA+GGG | 0.368687 | 3_1:-74303033 | None:intergenic |
| GAGGTGTACATAGGGCCATT+AGG | 0.373392 | 3_1:-74303034 | None:intergenic |
| CCTCTCTTGGTGTCATTACC+AGG | 0.375954 | 3_1:+74303053 | Msa0374770:CDS |
| AACCATCCTCTTCCATTGCT+TGG | 0.381373 | 3_1:-74302855 | None:intergenic |
| CAAGGCTGATGATAATGTTC+AGG | 0.418037 | 3_1:+74301978 | Msa0374770:CDS |
| TTCTGGGTTGTTGGTAACCT+GGG | 0.421246 | 3_1:-74303346 | None:intergenic |
| AAATGTTAGCGAACTTGGTC+TGG | 0.429840 | 3_1:+74303196 | Msa0374770:CDS |
| GAGCGGTTCATTCGCCCTAC+TGG | 0.430434 | 3_1:+74302929 | Msa0374770:CDS |
| AGCTCACAAGCACTCTAAAC+AGG | 0.437905 | 3_1:+74301210 | Msa0374770:CDS |
| TTACCAAAGCTACGTTTGTT+GGG | 0.448001 | 3_1:+74302876 | Msa0374770:CDS |
| GTATATGTAATGTAAATCTT+TGG | 0.453477 | 3_1:-74300912 | None:intergenic |
| GCACTGTAAGGTAGTAACTA+TGG | 0.456944 | 3_1:+74303626 | Msa0374770:three_prime_UTR |
| GGCCCTATGTACACCTCTCT+TGG | 0.470350 | 3_1:+74303040 | Msa0374770:CDS |
| AAAGCTACGTTTGTTGGGCC+TGG | 0.474081 | 3_1:+74302881 | Msa0374770:CDS |
| CTAGCCGCAAAATGAGCATA+TGG | 0.475469 | 3_1:+74301117 | Msa0374770:intron |
| AGGCCCAACAAACGTAGCTT+TGG | 0.479383 | 3_1:-74302879 | None:intergenic |
| CTTGGTCTGGTTACACCGGC+AGG | 0.479404 | 3_1:+74303209 | Msa0374770:CDS |
| TAGTGAGTGAACGATGGATT+GGG | 0.479636 | 3_1:-74300795 | None:intergenic |
| GAACAGGCCCTTGGTATTAA+GGG | 0.482408 | 3_1:+74301332 | Msa0374770:intron |
| TTTAAGGTCAGATCAAGTAT+TGG | 0.484287 | 3_1:+74303400 | Msa0374770:exon |
| GTTACCAAAGCTACGTTTGT+TGG | 0.484389 | 3_1:+74302875 | Msa0374770:CDS |
| TCATTCGCCCTACTGGATTG+AGG | 0.491508 | 3_1:+74302936 | Msa0374770:CDS |
| TGCGAGTTCTTTCTGATACA+AGG | 0.492860 | 3_1:-74300827 | None:intergenic |
| ATGAACCGCTCATACTTTGG+AGG | 0.495101 | 3_1:-74302917 | None:intergenic |
| AGCTCAAAATTGAGTGCCAC+GGG | 0.495665 | 3_1:+74303686 | Msa0374770:three_prime_UTR |
| AACATTTCATCTTCAGCCAC+AGG | 0.498226 | 3_1:-74302380 | None:intergenic |
| ATTCCACTGGAACAGGCCCT+TGG | 0.499278 | 3_1:+74301323 | Msa0374770:intron |
| GTAGTGAGTGAACGATGGAT+TGG | 0.503201 | 3_1:-74300796 | None:intergenic |
| ATATACATATACAGAAGAAC+CGG | 0.503875 | 3_1:+74300929 | Msa0374770:five_prime_UTR |
| GCAACACCATTAAGCAAAAG+AGG | 0.504420 | 3_1:+74302154 | Msa0374770:CDS |
| AAAAGAGGAAGGAGAAGGCT+GGG | 0.512948 | 3_1:+74302169 | Msa0374770:CDS |
| TGATCACTTCTAGCACTGTA+AGG | 0.513524 | 3_1:+74303614 | Msa0374770:three_prime_UTR |
| TACCTCAATTATAGATCCCC+TGG | 0.514336 | 3_1:-74303071 | None:intergenic |
| GCACTCTAAACAGGCCCAGC+AGG | 0.517478 | 3_1:+74301219 | Msa0374770:CDS |
| CCCCACACAACTTTCCCTGC+CGG | 0.519424 | 3_1:-74303224 | None:intergenic |
| CAAAAGAGGAAGGAGAAGGC+TGG | 0.524008 | 3_1:+74302168 | Msa0374770:CDS |
| CGCAATCTCACCTTAGGTAG+AGG | 0.525741 | 3_1:-74302204 | None:intergenic |
| ATCCTGTCGGAAAACGCAGC+CGG | 0.527947 | 3_1:+74300879 | Msa0374770:five_prime_UTR |
| TCATTGACGATCCGTTGCAT+TGG | 0.528350 | 3_1:-74303656 | None:intergenic |
| TCACGATCCAAAAGATATGC+AGG | 0.530672 | 3_1:-74302012 | None:intergenic |
| TAAGGTAGTAACTATGGTCA+AGG | 0.544983 | 3_1:+74303632 | Msa0374770:three_prime_UTR |
| CACCGGCAGGGAAAGTTGTG+TGG | 0.551474 | 3_1:+74303222 | Msa0374770:CDS |
| TTGCAGCCAAGCAATGGAAG+AGG | 0.553612 | 3_1:+74302849 | Msa0374770:intron |
| CACCAAGAGAGGTGTACATA+GGG | 0.554572 | 3_1:-74303042 | None:intergenic |
| ATGGGATGTTCCTCTACCTA+AGG | 0.559228 | 3_1:+74302194 | Msa0374770:CDS |
| ACACCAAGAGAGGTGTACAT+AGG | 0.561851 | 3_1:-74303043 | None:intergenic |
| ACCAACAACCCAGAAAATGA+TGG | 0.563594 | 3_1:+74303354 | Msa0374770:CDS |
| ACCGGCAGGGAAAGTTGTGT+GGG | 0.567026 | 3_1:+74303223 | Msa0374770:CDS |
| TGATTTGAATTAAACCTGCT+GGG | 0.569811 | 3_1:-74301233 | None:intergenic |
| TGAACGATGGATTGGGCCTG+TGG | 0.576390 | 3_1:-74300788 | None:intergenic |
| TTAGTGAACCTCAATCCAGT+AGG | 0.577477 | 3_1:-74302944 | None:intergenic |
| ATGTTCAAAGTGGTCCGCAC+CGG | 0.580559 | 3_1:+74302398 | Msa0374770:CDS |
| GGCTGATGATAATGTTCAGG+AGG | 0.580998 | 3_1:+74301981 | Msa0374770:CDS |
| CGAACTTGGTCTGGTTACAC+CGG | 0.585178 | 3_1:+74303205 | Msa0374770:CDS |
| AAGGTCAGATCAAGTATTGG+AGG | 0.586723 | 3_1:+74303403 | Msa0374770:exon |
| TACCAGGGGATCTATAATTG+AGG | 0.588901 | 3_1:+74303069 | Msa0374770:CDS |
| AAGCTCAAAATTGAGTGCCA+CGG | 0.594944 | 3_1:+74303685 | Msa0374770:three_prime_UTR |
| TGAGAACACAACACGAGCAA+AGG | 0.595295 | 3_1:+74302032 | Msa0374770:CDS |
| CTCTCTTGGTGTCATTACCA+GGG | 0.600053 | 3_1:+74303054 | Msa0374770:CDS |
| CACCATTAAGCAAAAGAGGA+AGG | 0.600141 | 3_1:+74302158 | Msa0374770:CDS |
| GAATGCAGGTAAATATGCCC+AGG | 0.602897 | 3_1:+74303329 | Msa0374770:intron |
| ATGGTCAAGGGCCAATGCAA+CGG | 0.606590 | 3_1:+74303645 | Msa0374770:three_prime_UTR |
| ATTTCCTTAGGTACGTCCTG+TGG | 0.610316 | 3_1:+74302364 | Msa0374770:intron |
| TTGAATTTCAACAATCACAA+TGG | 0.611536 | 3_1:+74300982 | Msa0374770:exon |
| AGATGTTGACTCATCATGCA+TGG | 0.617671 | 3_1:-74301950 | None:intergenic |
| TGCATGATGAGTCAACATCT+AGG | 0.617897 | 3_1:+74301953 | Msa0374770:CDS |
| TCTCTTGGTGTCATTACCAG+GGG | 0.619690 | 3_1:+74303055 | Msa0374770:CDS |
| CATCTTACCCTTAATACCAA+GGG | 0.628119 | 3_1:-74301339 | None:intergenic |
| TCATCTTACCCTTAATACCA+AGG | 0.630592 | 3_1:-74301340 | None:intergenic |
| TAAGCAAAAGAGGAAGGAGA+AGG | 0.630601 | 3_1:+74302164 | Msa0374770:CDS |
| TAGTGAACCTCAATCCAGTA+GGG | 0.635011 | 3_1:-74302943 | None:intergenic |
| TGAGTCAACATCTAGGCGCA+AGG | 0.649808 | 3_1:+74301960 | Msa0374770:CDS |
| TTGGTCTGGTTACACCGGCA+GGG | 0.652736 | 3_1:+74303210 | Msa0374770:CDS |
| AAGGTAGTAACTATGGTCAA+GGG | 0.653817 | 3_1:+74303633 | Msa0374770:three_prime_UTR |
| TTTCTGATACAAGGCTAGAG+CGG | 0.657579 | 3_1:-74300818 | None:intergenic |
| GAGCGGTAGTGAGTGAACGA+TGG | 0.657591 | 3_1:-74300801 | None:intergenic |
| AGCCAAGCAATGGAAGAGGA+TGG | 0.659521 | 3_1:+74302853 | Msa0374770:intron |
| CCTGGTAATGACACCAAGAG+AGG | 0.664047 | 3_1:-74303053 | None:intergenic |
| GCTGATGATAATGTTCAGGA+GGG | 0.669436 | 3_1:+74301982 | Msa0374770:CDS |
| ATAAAGAGAATACTAGAACA+TGG | 0.678348 | 3_1:-74303572 | None:intergenic |
| GAACGATGGATTGGGCCTGT+GGG | 0.682857 | 3_1:-74300787 | None:intergenic |
| GAAAACCTCCAAAGTATGAG+CGG | 0.683082 | 3_1:+74302912 | Msa0374770:CDS |
| TTTCTTCGTGATCCAAACGG+CGG | 0.696050 | 3_1:-74301162 | None:intergenic |
| TGAAGATGAAATGTTCAAAG+TGG | 0.707953 | 3_1:+74302388 | Msa0374770:CDS |
| GCTCAAAATTGAGTGCCACG+GGG | 0.712020 | 3_1:+74303687 | Msa0374770:three_prime_UTR |
| CCGGCAGGGAAAGTTGTGTG+GGG | 0.732167 | 3_1:+74303224 | Msa0374770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTAATTATAACTTTAAAA+AGG | - | chr3_1:74302328-74302347 | None:intergenic | 10.0% |
| !!! | AATTTTAATTTATCAAATGA+TGG | + | chr3_1:74302695-74302714 | Msa0374770:intron | 10.0% |
| !!! | ATTTTAATTTATCAAATGAT+GGG | + | chr3_1:74302696-74302715 | Msa0374770:intron | 10.0% |
| !!! | TATATTTTCATAAATCTAAC+TGG | + | chr3_1:74301289-74301308 | Msa0374770:intron | 15.0% |
| !!! | ATATTTTCATAAATCTAACT+GGG | + | chr3_1:74301290-74301309 | Msa0374770:intron | 15.0% |
| !! | AAATTATAAGAGAAACTATT+AGG | + | chr3_1:74301646-74301665 | Msa0374770:intron | 15.0% |
| !! | GTATATGTAATGTAAATCTT+TGG | - | chr3_1:74300915-74300934 | None:intergenic | 20.0% |
| !! | AAACAAAGAAAAACATAAAC+AGG | - | chr3_1:74301048-74301067 | None:intergenic | 20.0% |
| !!! | AATCAAGCACAAATTTTTAT+TGG | - | chr3_1:74301522-74301541 | None:intergenic | 20.0% |
| !!! | GTTTCTCTTATAATTTTTCA+AGG | - | chr3_1:74301642-74301661 | None:intergenic | 20.0% |
| !!! | ATATTTTCTCAGTTCTTTAA+AGG | + | chr3_1:74302613-74302632 | Msa0374770:intron | 20.0% |
| !! | ACATTCAATCTAGAAATTAT+TGG | + | chr3_1:74302998-74303017 | Msa0374770:CDS | 20.0% |
| !! | ATTTCTTGTTCTTATAATTG+AGG | + | chr3_1:74303099-74303118 | Msa0374770:intron | 20.0% |
| !! | TTTCTTGTTCTTATAATTGA+GGG | + | chr3_1:74303100-74303119 | Msa0374770:intron | 20.0% |
| !!! | TATTTTTGTGACTTGTATTT+TGG | + | chr3_1:74303252-74303271 | Msa0374770:intron | 20.0% |
| ! | ATATACATATACAGAAGAAC+CGG | + | chr3_1:74300929-74300948 | Msa0374770:five_prime_UTR | 25.0% |
| ! | TTGAATTTCAACAATCACAA+TGG | + | chr3_1:74300982-74301001 | Msa0374770:exon | 25.0% |
| !!! | TTTTTCGGCATAATTTTTCT+TGG | - | chr3_1:74301369-74301388 | None:intergenic | 25.0% |
| ! | TGTGCTTGATTTCTTAAATA+TGG | + | chr3_1:74301531-74301550 | Msa0374770:intron | 25.0% |
| !! | TCTTAAATATGGTGGAAAAT+AGG | + | chr3_1:74301542-74301561 | Msa0374770:intron | 25.0% |
| ! | ATAAGAGAAACTATTAGGAA+AGG | + | chr3_1:74301651-74301670 | Msa0374770:intron | 25.0% |
| ! | TATTAGGAAAGGTTTATGAT+AGG | + | chr3_1:74301662-74301681 | Msa0374770:intron | 25.0% |
| ! | GTTGTTGTATTTCTTCAATA+TGG | + | chr3_1:74301816-74301835 | Msa0374770:intron | 25.0% |
| ! | TATGTTTATTAAAGAGTTGC+TGG | + | chr3_1:74301845-74301864 | Msa0374770:intron | 25.0% |
| !!! | AATCTTGTTTTGTAACAGTT+TGG | + | chr3_1:74301927-74301946 | Msa0374770:intron | 25.0% |
| ! | AAACTTACAAGAATATGCAA+GGG | - | chr3_1:74302100-74302119 | None:intergenic | 25.0% |
| ! | TAAACTTACAAGAATATGCA+AGG | - | chr3_1:74302101-74302120 | None:intergenic | 25.0% |
| ! | ATGATCATTTCCTTTCTAAA+GGG | - | chr3_1:74302277-74302296 | None:intergenic | 25.0% |
| ! | TTTAGAAAGGAAATGATCAT+CGG | + | chr3_1:74302277-74302296 | Msa0374770:intron | 25.0% |
| ! | GTTATAATTAACTGTATGTG+TGG | + | chr3_1:74302335-74302354 | Msa0374770:intron | 25.0% |
| !! | ATACTTACTCTTTCTTTTAC+CGG | - | chr3_1:74302420-74302439 | None:intergenic | 25.0% |
| ! | TATATCCATAAACAATAGGA+GGG | - | chr3_1:74302581-74302600 | None:intergenic | 25.0% |
| ! | TTCTTGTTCTTATAATTGAG+GGG | + | chr3_1:74303101-74303120 | Msa0374770:intron | 25.0% |
| !! | CTGAAATTACAGTATTGAAA+AGG | - | chr3_1:74303174-74303193 | None:intergenic | 25.0% |
| !! | CTTTTCAATACTGTAATTTC+AGG | + | chr3_1:74303172-74303191 | Msa0374770:intron | 25.0% |
| !! | TAATACATCCATCATTTTCT+GGG | - | chr3_1:74303365-74303384 | None:intergenic | 25.0% |
| !! | TTAATACATCCATCATTTTC+TGG | - | chr3_1:74303366-74303385 | None:intergenic | 25.0% |
| !!! | AATGCTGTTTTACTTGTTTA+AGG | + | chr3_1:74303384-74303403 | Msa0374770:CDS | 25.0% |
| ! | CCTATTAGACTACAAAAAAA+AGG | - | chr3_1:74303443-74303462 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTTGTAGTCTAAT+AGG | + | chr3_1:74303440-74303459 | Msa0374770:three_prime_UTR | 25.0% |
| ! | TTTCATCAAAAATTCTAGAC+TGG | - | chr3_1:74303475-74303494 | None:intergenic | 25.0% |
| ! | ATAAAGAGAATACTAGAACA+TGG | - | chr3_1:74303575-74303594 | None:intergenic | 25.0% |
| ATAAAAAATTCTAGTCCCAC+AGG | + | chr3_1:74300772-74300791 | Msa0374770:five_prime_UTR | 30.0% | |
| TTCGACTAAAAACACAAAAC+CGG | - | chr3_1:74300951-74300970 | None:intergenic | 30.0% | |
| !!! | TGTTTTTAGTCGAAGCTTAT+TGG | + | chr3_1:74300957-74300976 | Msa0374770:five_prime_UTR | 30.0% |
| ! | AACAGAATCAGAAAAAGCAT+GGG | - | chr3_1:74301076-74301095 | None:intergenic | 30.0% |
| AAACAGAATCAGAAAAAGCA+TGG | - | chr3_1:74301077-74301096 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTTCGTGATCCAAA+CGG | - | chr3_1:74301168-74301187 | None:intergenic | 30.0% |
| TGGATCACGAAGAAAAAATT+CGG | + | chr3_1:74301170-74301189 | Msa0374770:CDS | 30.0% | |
| AGAAAAAATTCGGAAGAAAG+AGG | + | chr3_1:74301180-74301199 | Msa0374770:CDS | 30.0% | |
| TGATTTGAATTAAACCTGCT+GGG | - | chr3_1:74301236-74301255 | None:intergenic | 30.0% | |
| GCTTGATTTCTTAAATATGG+TGG | + | chr3_1:74301534-74301553 | Msa0374770:intron | 30.0% | |
| AGGTTTATGATAGGTCATTA+TGG | + | chr3_1:74301671-74301690 | Msa0374770:intron | 30.0% | |
| CAATAACAACAACAACAACT+AGG | - | chr3_1:74301797-74301816 | None:intergenic | 30.0% | |
| TTTATTAAAGAGTTGCTGGT+TGG | + | chr3_1:74301849-74301868 | Msa0374770:intron | 30.0% | |
| GTGTTAGATAATGATTAGCA+CGG | + | chr3_1:74301871-74301890 | Msa0374770:intron | 30.0% | |
| ATGTTATCAGCAGAATTGAA+AGG | + | chr3_1:74302056-74302075 | Msa0374770:intron | 30.0% | |
| GGGAAAAAAAGCAACATAAT+GGG | - | chr3_1:74302257-74302276 | None:intergenic | 30.0% | |
| AGGGAAAAAAAGCAACATAA+TGG | - | chr3_1:74302258-74302277 | None:intergenic | 30.0% | |
| !!! | TGCTTTTTTTCCCTTTAGAA+AGG | + | chr3_1:74302264-74302283 | Msa0374770:intron | 30.0% |
| GATGATCATTTCCTTTCTAA+AGG | - | chr3_1:74302278-74302297 | None:intergenic | 30.0% | |
| TGAAGATGAAATGTTCAAAG+TGG | + | chr3_1:74302388-74302407 | Msa0374770:CDS | 30.0% | |
| AGTATCACATTTATTGCTTC+TGG | + | chr3_1:74302435-74302454 | Msa0374770:intron | 30.0% | |
| CTATATCCATAAACAATAGG+AGG | - | chr3_1:74302582-74302601 | None:intergenic | 30.0% | |
| TGGCTATATCCATAAACAAT+AGG | - | chr3_1:74302585-74302604 | None:intergenic | 30.0% | |
| TATTGTTTATGGATATAGCC+AGG | + | chr3_1:74302584-74302603 | Msa0374770:intron | 30.0% | |
| CTGAGAAAATATAGATTTCC+TGG | - | chr3_1:74302605-74302624 | None:intergenic | 30.0% | |
| !! | ATCAAATGATGGGTTTGTAA+AGG | + | chr3_1:74302706-74302725 | Msa0374770:intron | 30.0% |
| ! | TTGAATGTGCATTTAAGTTC+AGG | - | chr3_1:74302986-74303005 | None:intergenic | 30.0% |
| ! | ACAGTATTGAAAAGGTCAAA+GGG | - | chr3_1:74303166-74303185 | None:intergenic | 30.0% |
| ! | TACAGTATTGAAAAGGTCAA+AGG | - | chr3_1:74303167-74303186 | None:intergenic | 30.0% |
| TTTAGCTGATATTGATGCAT+TGG | + | chr3_1:74303291-74303310 | Msa0374770:intron | 30.0% | |
| ! | TTTAAGGTCAGATCAAGTAT+TGG | + | chr3_1:74303400-74303419 | Msa0374770:exon | 30.0% |
| ! | TTGATACCTATGATTTTGTC+CGG | + | chr3_1:74303511-74303530 | Msa0374770:three_prime_UTR | 30.0% |
| ! | TTGATTTTTGCGGCGAATTA+GGG | - | chr3_1:74300858-74300877 | None:intergenic | 35.0% |
| !! | TTTGATTTTTGCGGCGAATT+AGG | - | chr3_1:74300859-74300878 | None:intergenic | 35.0% |
| !!! | CGACAGGATTTTGATTTTTG+CGG | - | chr3_1:74300868-74300887 | None:intergenic | 35.0% |
| CGCAAAAATCAAAATCCTGT+CGG | + | chr3_1:74300866-74300885 | Msa0374770:five_prime_UTR | 35.0% | |
| AATCTTTGGCTGAAAAACTC+CGG | - | chr3_1:74300901-74300920 | None:intergenic | 35.0% | |
| GTGATTTGAATTAAACCTGC+TGG | - | chr3_1:74301237-74301256 | None:intergenic | 35.0% | |
| CATCTTACCCTTAATACCAA+GGG | - | chr3_1:74301342-74301361 | None:intergenic | 35.0% | |
| TCATCTTACCCTTAATACCA+AGG | - | chr3_1:74301343-74301362 | None:intergenic | 35.0% | |
| ! | ATATGGTGGAAAATAGGCTT+AGG | + | chr3_1:74301548-74301567 | Msa0374770:intron | 35.0% |
| GACCTGTATAATCTGTAGTA+AGG | + | chr3_1:74301593-74301612 | Msa0374770:intron | 35.0% | |
| CTCCTTACTACAGATTATAC+AGG | - | chr3_1:74301598-74301617 | None:intergenic | 35.0% | |
| AGTAAGGAGAGTAAATCAGA+TGG | + | chr3_1:74301609-74301628 | Msa0374770:intron | 35.0% | |
| TAGATAATGATTAGCACGGT+AGG | + | chr3_1:74301875-74301894 | Msa0374770:intron | 35.0% | |
| TGCTTCTGGTATTATGATCT+TGG | + | chr3_1:74302449-74302468 | Msa0374770:intron | 35.0% | |
| !! | ATCTTGGTGTCACATGTATT+AGG | + | chr3_1:74302465-74302484 | Msa0374770:intron | 35.0% |
| !! | TCTTGGTGTCACATGTATTA+GGG | + | chr3_1:74302466-74302485 | Msa0374770:intron | 35.0% |
| CTTAACCCATTTCAATCATG+TGG | - | chr3_1:74302500-74302519 | None:intergenic | 35.0% | |
| ! | TTGAGCTGCTTGAATTTTTG+TGG | + | chr3_1:74302636-74302655 | Msa0374770:intron | 35.0% |
| ! | TGAGCTGCTTGAATTTTTGT+GGG | + | chr3_1:74302637-74302656 | Msa0374770:intron | 35.0% |
| AATTTCCGTGACTTAAGAGT+TGG | - | chr3_1:74302679-74302698 | None:intergenic | 35.0% | |
| AGTTCCTTGTTAGCATGTTA+CGG | + | chr3_1:74302758-74302777 | Msa0374770:intron | 35.0% | |
| AATACTATGAGATCTGCTTC+TGG | - | chr3_1:74302817-74302836 | None:intergenic | 35.0% | |
| GAAGCAGATCTCATAGTATT+TGG | + | chr3_1:74302817-74302836 | Msa0374770:intron | 35.0% | |
| TTACCAAAGCTACGTTTGTT+GGG | + | chr3_1:74302876-74302895 | Msa0374770:CDS | 35.0% | |
| ! | ACTTTTGCACTCGCAATTTA+AGG | + | chr3_1:74303126-74303145 | Msa0374770:intron | 35.0% |
| ! | AGTATTGAAAAGGTCAAAGG+GGG | - | chr3_1:74303164-74303183 | None:intergenic | 35.0% |
| ! | CAGTATTGAAAAGGTCAAAG+GGG | - | chr3_1:74303165-74303184 | None:intergenic | 35.0% |
| !!! | GACTTGTATTTTGGTTGTCA+TGG | + | chr3_1:74303261-74303280 | Msa0374770:intron | 35.0% |
| !! | TTTTTGTTTGCCATGAATGC+AGG | + | chr3_1:74303315-74303334 | Msa0374770:intron | 35.0% |
| ! | TGATACCTATGATTTTGTCC+GGG | + | chr3_1:74303512-74303531 | Msa0374770:three_prime_UTR | 35.0% |
| ! | ATTTTCCCGGACAAAATCAT+AGG | - | chr3_1:74303520-74303539 | None:intergenic | 35.0% |
| ! | TATGATTTTGTCCGGGAAAA+TGG | + | chr3_1:74303519-74303538 | Msa0374770:three_prime_UTR | 35.0% |
| ! | AAAAATCTCCACCATTTTCC+CGG | - | chr3_1:74303533-74303552 | None:intergenic | 35.0% |
| !! | ATGGTGGAGATTTTTGTTAC+TGG | + | chr3_1:74303538-74303557 | Msa0374770:three_prime_UTR | 35.0% |
| ! | GGAGATTTTTGTTACTGGAT+TGG | + | chr3_1:74303543-74303562 | Msa0374770:three_prime_UTR | 35.0% |
| TAAGGTAGTAACTATGGTCA+AGG | + | chr3_1:74303632-74303651 | Msa0374770:three_prime_UTR | 35.0% | |
| AAGGTAGTAACTATGGTCAA+GGG | + | chr3_1:74303633-74303652 | Msa0374770:three_prime_UTR | 35.0% | |
| ! | TAGTGAGTGAACGATGGATT+GGG | - | chr3_1:74300798-74300817 | None:intergenic | 40.0% |
| TTTCTGATACAAGGCTAGAG+CGG | - | chr3_1:74300821-74300840 | None:intergenic | 40.0% | |
| TGCGAGTTCTTTCTGATACA+AGG | - | chr3_1:74300830-74300849 | None:intergenic | 40.0% | |
| GAGCGTCACCTTAAAAAGTA+TGG | + | chr3_1:74301139-74301158 | Msa0374770:CDS | 40.0% | |
| GGGTTTCTGTTTAATTCCAC+TGG | + | chr3_1:74301310-74301329 | Msa0374770:intron | 40.0% | |
| CTGTTTAATTCCACTGGAAC+AGG | + | chr3_1:74301316-74301335 | Msa0374770:intron | 40.0% | |
| GAAAATAGGCTTAGGTGGTT+TGG | + | chr3_1:74301556-74301575 | Msa0374770:intron | 40.0% | |
| AAGGAGAGTAAATCAGATGG+AGG | + | chr3_1:74301612-74301631 | Msa0374770:intron | 40.0% | |
| CGTAATTTGATCCATGTAGC+CGG | + | chr3_1:74301694-74301713 | Msa0374770:intron | 40.0% | |
| ! | AAAGCCTTATCCCACTAAGT+GGG | - | chr3_1:74301721-74301740 | None:intergenic | 40.0% |
| ! | AAAAGCCTTATCCCACTAAG+TGG | - | chr3_1:74301722-74301741 | None:intergenic | 40.0% |
| ! | ACTTAGTGGGATAAGGCTTT+TGG | + | chr3_1:74301721-74301740 | Msa0374770:intron | 40.0% |
| !! | AGATGTTGACTCATCATGCA+TGG | - | chr3_1:74301953-74301972 | None:intergenic | 40.0% |
| TGCATGATGAGTCAACATCT+AGG | + | chr3_1:74301953-74301972 | Msa0374770:CDS | 40.0% | |
| ! | CAAGGCTGATGATAATGTTC+AGG | + | chr3_1:74301978-74301997 | Msa0374770:CDS | 40.0% |
| ! | GCTGATGATAATGTTCAGGA+GGG | + | chr3_1:74301982-74302001 | Msa0374770:CDS | 40.0% |
| ! | AGCTGTTCCTGCATATCTTT+TGG | + | chr3_1:74302005-74302024 | Msa0374770:CDS | 40.0% |
| TCACGATCCAAAAGATATGC+AGG | - | chr3_1:74302015-74302034 | None:intergenic | 40.0% | |
| GCAACACCATTAAGCAAAAG+AGG | + | chr3_1:74302154-74302173 | Msa0374770:CDS | 40.0% | |
| CACCATTAAGCAAAAGAGGA+AGG | + | chr3_1:74302158-74302177 | Msa0374770:CDS | 40.0% | |
| ! | CTCCTTCCTCTTTTGCTTAA+TGG | - | chr3_1:74302163-74302182 | None:intergenic | 40.0% |
| TAAGCAAAAGAGGAAGGAGA+AGG | + | chr3_1:74302164-74302183 | Msa0374770:CDS | 40.0% | |
| ATTGAACGCAATCTCACCTT+AGG | - | chr3_1:74302213-74302232 | None:intergenic | 40.0% | |
| GAAAGGAAATGATCATCGGA+AGG | + | chr3_1:74302281-74302300 | Msa0374770:intron | 40.0% | |
| ! | GTGTGGCTTTTCATTTCCTT+AGG | + | chr3_1:74302352-74302371 | Msa0374770:intron | 40.0% |
| AACATTTCATCTTCAGCCAC+AGG | - | chr3_1:74302383-74302402 | None:intergenic | 40.0% | |
| ! | TACTCTTTCTTTTACCGGTG+CGG | - | chr3_1:74302415-74302434 | None:intergenic | 40.0% |
| TGTCACATGTATTAGGGTCT+TGG | + | chr3_1:74302472-74302491 | Msa0374770:intron | 40.0% | |
| !! | TTGGTGCCACATGATTGAAA+TGG | + | chr3_1:74302491-74302510 | Msa0374770:intron | 40.0% |
| !! | TGGTGCCACATGATTGAAAT+GGG | + | chr3_1:74302492-74302511 | Msa0374770:intron | 40.0% |
| TTGCTCCCTCCTATTGTTTA+TGG | + | chr3_1:74302573-74302592 | Msa0374770:intron | 40.0% | |
| AAACGCCAACTCTTAAGTCA+CGG | + | chr3_1:74302671-74302690 | Msa0374770:intron | 40.0% | |
| GTTCCTTGTTAGCATGTTAC+GGG | + | chr3_1:74302759-74302778 | Msa0374770:intron | 40.0% | |
| TTCCTTGTTAGCATGTTACG+GGG | + | chr3_1:74302760-74302779 | Msa0374770:intron | 40.0% | |
| GTTACCAAAGCTACGTTTGT+TGG | + | chr3_1:74302875-74302894 | Msa0374770:CDS | 40.0% | |
| !! | CTCATACTTTGGAGGTTTTC+TGG | - | chr3_1:74302912-74302931 | None:intergenic | 40.0% |
| GAAAACCTCCAAAGTATGAG+CGG | + | chr3_1:74302912-74302931 | Msa0374770:CDS | 40.0% | |
| TAGTGAACCTCAATCCAGTA+GGG | - | chr3_1:74302946-74302965 | None:intergenic | 40.0% | |
| TTAGTGAACCTCAATCCAGT+AGG | - | chr3_1:74302947-74302966 | None:intergenic | 40.0% | |
| GGAGTGAAGAAAAACCCTAA+TGG | + | chr3_1:74303019-74303038 | Msa0374770:CDS | 40.0% | |
| TACCAGGGGATCTATAATTG+AGG | + | chr3_1:74303069-74303088 | Msa0374770:CDS | 40.0% | |
| TACCTCAATTATAGATCCCC+TGG | - | chr3_1:74303074-74303093 | None:intergenic | 40.0% | |
| CAGGTAAATGTTAGCGAACT+TGG | + | chr3_1:74303191-74303210 | Msa0374770:intron | 40.0% | |
| AAATGTTAGCGAACTTGGTC+TGG | + | chr3_1:74303196-74303215 | Msa0374770:CDS | 40.0% | |
| GGCATATTTACCTGCATTCA+TGG | - | chr3_1:74303328-74303347 | None:intergenic | 40.0% | |
| ACCAACAACCCAGAAAATGA+TGG | + | chr3_1:74303354-74303373 | Msa0374770:CDS | 40.0% | |
| ! | TCCATCATTTTCTGGGTTGT+TGG | - | chr3_1:74303358-74303377 | None:intergenic | 40.0% |
| !! | AAGGTCAGATCAAGTATTGG+AGG | + | chr3_1:74303403-74303422 | Msa0374770:exon | 40.0% |
| TGATCACTTCTAGCACTGTA+AGG | + | chr3_1:74303614-74303633 | Msa0374770:three_prime_UTR | 40.0% | |
| GCACTGTAAGGTAGTAACTA+TGG | + | chr3_1:74303626-74303645 | Msa0374770:three_prime_UTR | 40.0% | |
| GTAGTGAGTGAACGATGGAT+TGG | - | chr3_1:74300799-74300818 | None:intergenic | 45.0% | |
| ! | TTTTGCGGCGAATTAGGGTT+GGG | - | chr3_1:74300853-74300872 | None:intergenic | 45.0% |
| ! | TTTTTGCGGCGAATTAGGGT+TGG | - | chr3_1:74300854-74300873 | None:intergenic | 45.0% |
| CTAGCCGCAAAATGAGCATA+TGG | + | chr3_1:74301117-74301136 | Msa0374770:intron | 45.0% | |
| ! | CGCTCCATATGCTCATTTTG+CGG | - | chr3_1:74301124-74301143 | None:intergenic | 45.0% |
| !! | AACGGCGGCCATACTTTTTA+AGG | - | chr3_1:74301150-74301169 | None:intergenic | 45.0% |
| ! | TAAAAAGTATGGCCGCCGTT+TGG | + | chr3_1:74301150-74301169 | Msa0374770:CDS | 45.0% |
| TTTCTTCGTGATCCAAACGG+CGG | - | chr3_1:74301165-74301184 | None:intergenic | 45.0% | |
| AGCTCACAAGCACTCTAAAC+AGG | + | chr3_1:74301210-74301229 | Msa0374770:CDS | 45.0% | |
| GAACAGGCCCTTGGTATTAA+GGG | + | chr3_1:74301332-74301351 | Msa0374770:intron | 45.0% | |
| !! | CCTCTTCATCTGCGCTTTTT+CGG | - | chr3_1:74301384-74301403 | None:intergenic | 45.0% |
| TGGTGGAAAATAGGCTTAGG+TGG | + | chr3_1:74301551-74301570 | Msa0374770:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3_1:74301720-74301739 | None:intergenic | 45.0% |
| CTTATCCCAGTAAGTGAGGT+CGG | - | chr3_1:74301773-74301792 | None:intergenic | 45.0% | |
| ! | GGCTGATGATAATGTTCAGG+AGG | + | chr3_1:74301981-74302000 | Msa0374770:CDS | 45.0% |
| TGAGAACACAACACGAGCAA+AGG | + | chr3_1:74302032-74302051 | Msa0374770:CDS | 45.0% | |
| AAAAGAGGAAGGAGAAGGCT+GGG | + | chr3_1:74302169-74302188 | Msa0374770:CDS | 45.0% | |
| ATGGGATGTTCCTCTACCTA+AGG | + | chr3_1:74302194-74302213 | Msa0374770:CDS | 45.0% | |
| ATTTCCTTAGGTACGTCCTG+TGG | + | chr3_1:74302364-74302383 | Msa0374770:intron | 45.0% | |
| ! | GCTGCTTGAATTTTTGTGGG+TGG | + | chr3_1:74302640-74302659 | Msa0374770:intron | 45.0% |
| TACCCCGTAACATGCTAACA+AGG | - | chr3_1:74302765-74302784 | None:intergenic | 45.0% | |
| TCCATTGCTTGGCTGCAAAA+TGG | - | chr3_1:74302847-74302866 | None:intergenic | 45.0% | |
| AACCATCCTCTTCCATTGCT+TGG | - | chr3_1:74302858-74302877 | None:intergenic | 45.0% | |
| !! | GGAGGTTTTCTGGTAAAACC+AGG | - | chr3_1:74302902-74302921 | None:intergenic | 45.0% |
| ATGAACCGCTCATACTTTGG+AGG | - | chr3_1:74302920-74302939 | None:intergenic | 45.0% | |
| CGAATGAACCGCTCATACTT+TGG | - | chr3_1:74302923-74302942 | None:intergenic | 45.0% | |
| AGGTGTACATAGGGCCATTA+GGG | - | chr3_1:74303036-74303055 | None:intergenic | 45.0% | |
| ! | CACCAAGAGAGGTGTACATA+GGG | - | chr3_1:74303045-74303064 | None:intergenic | 45.0% |
| ! | ACACCAAGAGAGGTGTACAT+AGG | - | chr3_1:74303046-74303065 | None:intergenic | 45.0% |
| !! | CTCTCTTGGTGTCATTACCA+GGG | + | chr3_1:74303054-74303073 | Msa0374770:CDS | 45.0% |
| !! | TCTCTTGGTGTCATTACCAG+GGG | + | chr3_1:74303055-74303074 | Msa0374770:CDS | 45.0% |
| GAATGCAGGTAAATATGCCC+AGG | + | chr3_1:74303329-74303348 | Msa0374770:intron | 45.0% | |
| !! | TTCTGGGTTGTTGGTAACCT+GGG | - | chr3_1:74303349-74303368 | None:intergenic | 45.0% |
| !! | TTTCTGGGTTGTTGGTAACC+TGG | - | chr3_1:74303350-74303369 | None:intergenic | 45.0% |
| ! | GATTTTGTCCGGGAAAATGG+TGG | + | chr3_1:74303522-74303541 | Msa0374770:three_prime_UTR | 45.0% |
| TCATTGACGATCCGTTGCAT+TGG | - | chr3_1:74303659-74303678 | None:intergenic | 45.0% | |
| GGAACAGGCCCTTGGTATTA+AGG | + | chr3_1:74301331-74301350 | Msa0374770:intron | 50.0% | |
| ! | CCGAAAAAGCGCAGATGAAG+AGG | + | chr3_1:74301381-74301400 | Msa0374770:CDS | 50.0% |
| ATGTAGCCGACCTCACTTAC+TGG | + | chr3_1:74301764-74301783 | Msa0374770:intron | 50.0% | |
| TGTAGCCGACCTCACTTACT+GGG | + | chr3_1:74301765-74301784 | Msa0374770:intron | 50.0% | |
| CGACCTCACTTACTGGGATA+AGG | + | chr3_1:74301771-74301790 | Msa0374770:intron | 50.0% | |
| ! | AGGCCTTATCCCAGTAAGTG+AGG | - | chr3_1:74301777-74301796 | None:intergenic | 50.0% |
| TGAGTCAACATCTAGGCGCA+AGG | + | chr3_1:74301960-74301979 | Msa0374770:CDS | 50.0% | |
| CAAAAGAGGAAGGAGAAGGC+TGG | + | chr3_1:74302168-74302187 | Msa0374770:CDS | 50.0% | |
| GAAGGAGAAGGCTGGGAAAT+GGG | + | chr3_1:74302176-74302195 | Msa0374770:CDS | 50.0% | |
| CGCAATCTCACCTTAGGTAG+AGG | - | chr3_1:74302207-74302226 | None:intergenic | 50.0% | |
| GGAAATGATCATCGGAAGGC+AGG | + | chr3_1:74302285-74302304 | Msa0374770:intron | 50.0% | |
| ATGTTCAAAGTGGTCCGCAC+CGG | + | chr3_1:74302398-74302417 | Msa0374770:CDS | 50.0% | |
| !! | GCCATTTTGCAGCCAAGCAA+TGG | + | chr3_1:74302843-74302862 | Msa0374770:intron | 50.0% |
| TTGCAGCCAAGCAATGGAAG+AGG | + | chr3_1:74302849-74302868 | Msa0374770:intron | 50.0% | |
| AGCCAAGCAATGGAAGAGGA+TGG | + | chr3_1:74302853-74302872 | Msa0374770:intron | 50.0% | |
| AGGCCCAACAAACGTAGCTT+TGG | - | chr3_1:74302882-74302901 | None:intergenic | 50.0% | |
| ! | AAAGCTACGTTTGTTGGGCC+TGG | + | chr3_1:74302881-74302900 | Msa0374770:CDS | 50.0% |
| TCATTCGCCCTACTGGATTG+AGG | + | chr3_1:74302936-74302955 | Msa0374770:CDS | 50.0% | |
| GAGGTGTACATAGGGCCATT+AGG | - | chr3_1:74303037-74303056 | None:intergenic | 50.0% | |
| ! | CCTGGTAATGACACCAAGAG+AGG | - | chr3_1:74303056-74303075 | None:intergenic | 50.0% |
| !! | CCTCTCTTGGTGTCATTACC+AGG | + | chr3_1:74303053-74303072 | Msa0374770:CDS | 50.0% |
| CGAACTTGGTCTGGTTACAC+CGG | + | chr3_1:74303205-74303224 | Msa0374770:CDS | 50.0% | |
| ATGGTCAAGGGCCAATGCAA+CGG | + | chr3_1:74303645-74303664 | Msa0374770:three_prime_UTR | 50.0% | |
| !! | GAACGATGGATTGGGCCTGT+GGG | - | chr3_1:74300790-74300809 | None:intergenic | 55.0% |
| !! | TGAACGATGGATTGGGCCTG+TGG | - | chr3_1:74300791-74300810 | None:intergenic | 55.0% |
| GAGCGGTAGTGAGTGAACGA+TGG | - | chr3_1:74300804-74300823 | None:intergenic | 55.0% | |
| ATCCTGTCGGAAAACGCAGC+CGG | + | chr3_1:74300879-74300898 | Msa0374770:five_prime_UTR | 55.0% | |
| ATTCCACTGGAACAGGCCCT+TGG | + | chr3_1:74301323-74301342 | Msa0374770:intron | 55.0% | |
| ATACCAAGGGCCTGTTCCAG+TGG | - | chr3_1:74301329-74301348 | None:intergenic | 55.0% | |
| CTTATCCCACTAAGTGGGGC+CGG | - | chr3_1:74301716-74301735 | None:intergenic | 55.0% | |
| GGAAGGAGAAGGCTGGGAAA+TGG | + | chr3_1:74302175-74302194 | Msa0374770:CDS | 55.0% | |
| GATCATCGGAAGGCAGGAAG+TGG | + | chr3_1:74302291-74302310 | Msa0374770:intron | 55.0% | |
| TCAGCCACAGGACGTACCTA+AGG | - | chr3_1:74302371-74302390 | None:intergenic | 55.0% | |
| GGCCCTATGTACACCTCTCT+TGG | + | chr3_1:74303040-74303059 | Msa0374770:CDS | 55.0% | |
| TTGGTCTGGTTACACCGGCA+GGG | + | chr3_1:74303210-74303229 | Msa0374770:CDS | 55.0% | |
| ACCGGCAGGGAAAGTTGTGT+GGG | + | chr3_1:74303223-74303242 | Msa0374770:CDS | 55.0% | |
| GCACTCTAAACAGGCCCAGC+AGG | + | chr3_1:74301219-74301238 | Msa0374770:CDS | 60.0% | |
| ACTAAGTGGGGCCGGCTACA+TGG | - | chr3_1:74301708-74301727 | None:intergenic | 60.0% | |
| ATGTAGCCGGCCCCACTTAG+TGG | + | chr3_1:74301707-74301726 | Msa0374770:intron | 60.0% | |
| TGTAGCCGGCCCCACTTAGT+GGG | + | chr3_1:74301708-74301727 | Msa0374770:intron | 60.0% | |
| CGGCCCCACTTAGTGGGATA+AGG | + | chr3_1:74301714-74301733 | Msa0374770:intron | 60.0% | |
| GAGCGGTTCATTCGCCCTAC+TGG | + | chr3_1:74302929-74302948 | Msa0374770:CDS | 60.0% | |
| CTTGGTCTGGTTACACCGGC+AGG | + | chr3_1:74303209-74303228 | Msa0374770:CDS | 60.0% | |
| CACCGGCAGGGAAAGTTGTG+TGG | + | chr3_1:74303222-74303241 | Msa0374770:CDS | 60.0% | |
| CCCCACACAACTTTCCCTGC+CGG | - | chr3_1:74303227-74303246 | None:intergenic | 60.0% | |
| CCGGCAGGGAAAGTTGTGTG+GGG | + | chr3_1:74303224-74303243 | Msa0374770:CDS | 60.0% | |
| ! | CTCCGGCTGCGTTTTCCGAC+AGG | - | chr3_1:74300884-74300903 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 74300760 | 74303706 | 74300760 | ID=Msa0374770;Name=Msa0374770 |
| chr3_1 | mRNA | 74300760 | 74303706 | 74300760 | ID=Msa0374770-mRNA-1;Parent=Msa0374770;Name=Msa0374770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=241|1|1|1|1|1|9|302|260 |
| chr3_1 | exon | 74300760 | 74301003 | 74300760 | ID=Msa0374770-mRNA-1:exon:17158;Parent=Msa0374770-mRNA-1 |
| chr3_1 | exon | 74301121 | 74301240 | 74301121 | ID=Msa0374770-mRNA-1:exon:17159;Parent=Msa0374770-mRNA-1 |
| chr3_1 | exon | 74301338 | 74301405 | 74301338 | ID=Msa0374770-mRNA-1:exon:17160;Parent=Msa0374770-mRNA-1 |
| chr3_1 | exon | 74301945 | 74302053 | 74301945 | ID=Msa0374770-mRNA-1:exon:17161;Parent=Msa0374770-mRNA-1 |
| chr3_1 | exon | 74302147 | 74302215 | 74302147 | ID=Msa0374770-mRNA-1:exon:17162;Parent=Msa0374770-mRNA-1 |
| chr3_1 | exon | 74302374 | 74302431 | 74302374 | ID=Msa0374770-mRNA-1:exon:17163;Parent=Msa0374770-mRNA-1 |
| chr3_1 | exon | 74302855 | 74303090 | 74302855 | ID=Msa0374770-mRNA-1:exon:17164;Parent=Msa0374770-mRNA-1 |
| chr3_1 | exon | 74303194 | 74303245 | 74303194 | ID=Msa0374770-mRNA-1:exon:17165;Parent=Msa0374770-mRNA-1 |
| chr3_1 | exon | 74303337 | 74303706 | 74303337 | ID=Msa0374770-mRNA-1:exon:17166;Parent=Msa0374770-mRNA-1 |
| chr3_1 | five_prime_UTR | 74300760 | 74301000 | 74300760 | ID=Msa0374770-mRNA-1:five_prime_utr;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74301001 | 74301003 | 74301001 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74301121 | 74301240 | 74301121 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74301338 | 74301405 | 74301338 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74301945 | 74302053 | 74301945 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74302147 | 74302215 | 74302147 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74302374 | 74302431 | 74302374 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74302855 | 74303090 | 74302855 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74303194 | 74303245 | 74303194 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | CDS | 74303337 | 74303404 | 74303337 | ID=Msa0374770-mRNA-1:cds;Parent=Msa0374770-mRNA-1 |
| chr3_1 | three_prime_UTR | 74303405 | 74303706 | 74303405 | ID=Msa0374770-mRNA-1:three_prime_utr;Parent=Msa0374770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
