Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230490 | XP_003591163.1 | 98.930 | 187 | 2 | 0 | 1 | 187 | 1 | 187 | 6.76e-129 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230490 | sp|Q940B0|RL183_ARATH | 83.957 | 187 | 30 | 0 | 1 | 187 | 1 | 187 | 1.15e-112 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230490 | G7I8R4 | 98.930 | 187 | 2 | 0 | 1 | 187 | 1 | 187 | 3.23e-129 | 370 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0230490 | 0.854834 | 9.453728e-62 | -8.615850e-47 |
| Msa0002790 | Msa0230490 | 0.864428 | 1.224470e-64 | -8.615850e-47 |
| Msa0003780 | Msa0230490 | 0.840903 | 6.569144e-58 | -8.615850e-47 |
| Msa0011740 | Msa0230490 | 0.807603 | 4.663435e-50 | -8.615850e-47 |
| Msa0022970 | Msa0230490 | 0.840029 | 1.112088e-57 | -8.615850e-47 |
| Msa0027260 | Msa0230490 | 0.821763 | 3.396490e-53 | -8.615850e-47 |
| Msa0032780 | Msa0230490 | 0.949513 | 1.092265e-107 | -8.615850e-47 |
| Msa0032810 | Msa0230490 | 0.874209 | 8.074047e-68 | -8.615850e-47 |
| Msa0038090 | Msa0230490 | 0.822108 | 2.825613e-53 | -8.615850e-47 |
| Msa0040690 | Msa0230490 | 0.830789 | 2.408924e-55 | -8.615850e-47 |
| Msa0042280 | Msa0230490 | 0.820662 | 6.092576e-53 | -8.615850e-47 |
| Msa0045730 | Msa0230490 | 0.888799 | 4.285214e-73 | -8.615850e-47 |
| Msa0046830 | Msa0230490 | 0.808143 | 3.579376e-50 | -8.615850e-47 |
| Msa0048180 | Msa0230490 | 0.842277 | 2.852878e-58 | -8.615850e-47 |
| Msa0056470 | Msa0230490 | 0.800028 | 1.746050e-48 | -8.615850e-47 |
| Msa0074030 | Msa0230490 | 0.854280 | 1.367734e-61 | -8.615850e-47 |
| Msa0085780 | Msa0230490 | 0.816245 | 6.107290e-52 | -8.615850e-47 |
| Msa0086750 | Msa0230490 | 0.839591 | 1.446327e-57 | -8.615850e-47 |
| Msa0093850 | Msa0230490 | 0.814870 | 1.236117e-51 | -8.615850e-47 |
| Msa0105370 | Msa0230490 | 0.832341 | 9.992169e-56 | -8.615850e-47 |
| Msa0116130 | Msa0230490 | 0.868489 | 6.287612e-66 | -8.615850e-47 |
| Msa0116670 | Msa0230490 | 0.879411 | 1.274077e-69 | -8.615850e-47 |
| Msa0118710 | Msa0230490 | 0.858327 | 8.887130e-63 | -8.615850e-47 |
| Msa0128860 | Msa0230490 | 0.846898 | 1.626683e-59 | -8.615850e-47 |
| Msa0133540 | Msa0230490 | 0.886515 | 3.197395e-72 | -8.615850e-47 |
| Msa0140820 | Msa0230490 | 0.804580 | 2.017766e-49 | -8.615850e-47 |
| Msa0140850 | Msa0230490 | 0.812318 | 4.503225e-51 | -8.615850e-47 |
| Msa0146340 | Msa0230490 | 0.850555 | 1.573934e-60 | -8.615850e-47 |
| Msa0163760 | Msa0230490 | 0.830618 | 2.653272e-55 | -8.615850e-47 |
| Msa0167480 | Msa0230490 | 0.830259 | 3.247563e-55 | -8.615850e-47 |
| Msa0172900 | Msa0230490 | 0.919153 | 6.423936e-87 | -8.615850e-47 |
| Msa0172930 | Msa0230490 | 0.812301 | 4.542779e-51 | -8.615850e-47 |
| Msa0173530 | Msa0230490 | 0.879211 | 1.500022e-69 | -8.615850e-47 |
| Msa0174730 | Msa0230490 | 0.845218 | 4.658473e-59 | -8.615850e-47 |
| Msa0179030 | Msa0230490 | 0.811781 | 5.895334e-51 | -8.615850e-47 |
| Msa0180020 | Msa0230490 | 0.828936 | 6.812321e-55 | -8.615850e-47 |
| Msa0181490 | Msa0230490 | 0.873804 | 1.107137e-67 | -8.615850e-47 |
| Msa0187930 | Msa0230490 | 0.819327 | 1.230933e-52 | -8.615850e-47 |
| Msa0188350 | Msa0230490 | 0.836052 | 1.173114e-56 | -8.615850e-47 |
| Msa0189700 | Msa0230490 | 0.865141 | 7.321816e-65 | -8.615850e-47 |
| Msa0194540 | Msa0230490 | 0.812395 | 4.332243e-51 | -8.615850e-47 |
| Msa0210360 | Msa0230490 | 0.829745 | 4.333691e-55 | -8.615850e-47 |
| Msa0218720 | Msa0230490 | 0.832784 | 7.755917e-56 | -8.615850e-47 |
| Msa0218830 | Msa0230490 | 0.869277 | 3.492451e-66 | -8.615850e-47 |
| Msa0219120 | Msa0230490 | 0.871579 | 6.135452e-67 | -8.615850e-47 |
| Msa0221030 | Msa0230490 | 0.834861 | 2.345809e-56 | -8.615850e-47 |
| Msa0222730 | Msa0230490 | 0.843001 | 1.832218e-58 | -8.615850e-47 |
| Msa0229150 | Msa0230490 | 0.841228 | 5.397107e-58 | -8.615850e-47 |
| Msa0230490 | Msa0230520 | 0.843463 | 1.379822e-58 | -8.615850e-47 |
| Msa0230490 | Msa0231100 | 0.842222 | 2.950929e-58 | -8.615850e-47 |
| Msa0230490 | Msa0232010 | 0.856302 | 3.526149e-62 | -8.615850e-47 |
| Msa0230490 | Msa0232080 | 0.860064 | 2.679218e-63 | -8.615850e-47 |
| Msa0230490 | Msa0244780 | 0.823923 | 1.066118e-53 | -8.615850e-47 |
| Msa0230490 | Msa0250820 | 0.814643 | 1.387497e-51 | -8.615850e-47 |
| Msa0230490 | Msa0258390 | 0.819139 | 1.358272e-52 | -8.615850e-47 |
| Msa0230490 | Msa0258850 | 0.891203 | 4.921095e-74 | -8.615850e-47 |
| Msa0230490 | Msa0262480 | 0.823403 | 1.411647e-53 | -8.615850e-47 |
| Msa0230490 | Msa0264010 | 0.877873 | 4.430593e-69 | -8.615850e-47 |
| Msa0230490 | Msa0265250 | 0.804889 | 1.739476e-49 | -8.615850e-47 |
| Msa0230490 | Msa0268130 | 0.810965 | 8.866522e-51 | -8.615850e-47 |
| Msa0230490 | Msa0275080 | 0.830286 | 3.199816e-55 | -8.615850e-47 |
| Msa0230490 | Msa0280370 | 0.802324 | 5.920504e-49 | -8.615850e-47 |
| Msa0230490 | Msa0281530 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0230490 | Msa0289580 | 0.863441 | 2.484303e-64 | -8.615850e-47 |
| Msa0230490 | Msa0289610 | 0.866442 | 2.842576e-65 | -8.615850e-47 |
| Msa0230490 | Msa0296250 | 0.845538 | 3.816291e-59 | -8.615850e-47 |
| Msa0230490 | Msa0297610 | 0.811592 | 6.483252e-51 | -8.615850e-47 |
| Msa0230490 | Msa0297830 | 0.801658 | 8.115041e-49 | -8.615850e-47 |
| Msa0230490 | Msa0298200 | 0.884018 | 2.743292e-71 | -8.615850e-47 |
| Msa0230490 | Msa0298990 | 0.815767 | 7.810049e-52 | -8.615850e-47 |
| Msa0230490 | Msa0300350 | 0.820235 | 7.634201e-53 | -8.615850e-47 |
| Msa0230490 | Msa0305780 | 0.829092 | 6.246582e-55 | -8.615850e-47 |
| Msa0230490 | Msa0306690 | 0.870508 | 1.384390e-66 | -8.615850e-47 |
| Msa0230490 | Msa0307850 | 0.804792 | 1.822551e-49 | -8.615850e-47 |
| Msa0230490 | Msa0310080 | 0.804992 | 1.655118e-49 | -8.615850e-47 |
| Msa0230490 | Msa0315980 | 0.826473 | 2.660514e-54 | -8.615850e-47 |
| Msa0230490 | Msa0317910 | 0.885914 | 5.389683e-72 | -8.615850e-47 |
| Msa0230490 | Msa0320590 | 0.808749 | 2.657950e-50 | -8.615850e-47 |
| Msa0230490 | Msa0327300 | 0.898048 | 7.766752e-77 | -8.615850e-47 |
| Msa0230490 | Msa0327330 | 0.875668 | 2.570690e-68 | -8.615850e-47 |
| Msa0230490 | Msa0332640 | 0.836597 | 8.525779e-57 | -8.615850e-47 |
| Msa0230490 | Msa0335840 | 0.805086 | 1.581508e-49 | -8.615850e-47 |
| Msa0230490 | Msa0336010 | 0.890627 | 8.299782e-74 | -8.615850e-47 |
| Msa0230490 | Msa0341690 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
| Msa0230490 | Msa0348830 | 0.900466 | 7.120650e-78 | -8.615850e-47 |
| Msa0230490 | Msa0357900 | 0.827796 | 1.283731e-54 | -8.615850e-47 |
| Msa0230490 | Msa0369450 | 0.817663 | 2.933521e-52 | -8.615850e-47 |
| Msa0230490 | Msa0374770 | 0.807453 | 5.017797e-50 | -8.615850e-47 |
| Msa0230490 | Msa0423750 | 0.874126 | 8.614563e-68 | -8.615850e-47 |
| Msa0230490 | Msa0425410 | 0.810794 | 9.653643e-51 | -8.615850e-47 |
| Msa0230490 | Msa0427150 | 0.831016 | 2.119420e-55 | -8.615850e-47 |
| Msa0230490 | Msa0435370 | 0.814942 | 1.191624e-51 | -8.615850e-47 |
| Msa0230490 | Msa0435420 | 0.826308 | 2.912783e-54 | -8.615850e-47 |
| Msa0230490 | Msa0443390 | 0.892049 | 2.269503e-74 | -8.615850e-47 |
| Msa0230490 | Msa0481850 | 0.821107 | 4.814104e-53 | -8.615850e-47 |
| Msa0230490 | Msa0483110 | 0.876110 | 1.811984e-68 | -8.615850e-47 |
| Msa0230490 | Msa0526540 | 0.861067 | 1.331097e-63 | -8.615850e-47 |
| Msa0230490 | Msa0527020 | 0.828682 | 7.847498e-55 | -8.615850e-47 |
| Msa0230490 | Msa0527150 | 0.861115 | 1.287108e-63 | -8.615850e-47 |
| Msa0230490 | Msa0531650 | 0.851322 | 9.568677e-61 | -8.615850e-47 |
| Msa0230490 | Msa0534750 | 0.874901 | 4.701360e-68 | -8.615850e-47 |
| Msa0230490 | Msa0576940 | 0.855220 | 7.299499e-62 | -8.615850e-47 |
| Msa0230490 | Msa0581110 | 0.844882 | 5.742046e-59 | -8.615850e-47 |
| Msa0230490 | Msa0584030 | 0.817672 | 2.920205e-52 | -8.615850e-47 |
| Msa0230490 | Msa0584260 | 0.842577 | 2.376038e-58 | -8.615850e-47 |
| Msa0230490 | Msa0586420 | 0.815015 | 1.147578e-51 | -8.615850e-47 |
| Msa0230490 | Msa0588360 | 0.870479 | 1.415032e-66 | -8.615850e-47 |
| Msa0230490 | Msa0590940 | 0.840563 | 8.065309e-58 | -8.615850e-47 |
| Msa0230490 | Msa0608320 | 0.815113 | 1.091757e-51 | -8.615850e-47 |
| Msa0230490 | Msa0615440 | 0.813911 | 2.013487e-51 | -8.615850e-47 |
| Msa0230490 | Msa0615580 | 0.877984 | 4.052253e-69 | -8.615850e-47 |
| Msa0230490 | Msa0617540 | 0.809827 | 1.560867e-50 | -8.615850e-47 |
| Msa0230490 | Msa0622750 | 0.886543 | 3.121171e-72 | -8.615850e-47 |
| Msa0230490 | Msa0623200 | 0.891582 | 3.482153e-74 | -8.615850e-47 |
| Msa0230490 | Msa0631250 | 0.831521 | 1.592361e-55 | -8.615850e-47 |
| Msa0230490 | Msa0661300 | 0.817983 | 2.484666e-52 | -8.615850e-47 |
| Msa0230490 | Msa0664560 | 0.823080 | 1.678841e-53 | -8.615850e-47 |
| Msa0230490 | Msa0666230 | 0.849712 | 2.712527e-60 | -8.615850e-47 |
| Msa0230490 | Msa0669520 | 0.841307 | 5.143883e-58 | -8.615850e-47 |
| Msa0230490 | Msa0672100 | 0.800264 | 1.563717e-48 | -8.615850e-47 |
| Msa0230490 | Msa0693330 | 0.815728 | 7.967820e-52 | -8.615850e-47 |
| Msa0230490 | Msa0698490 | 0.813287 | 2.763086e-51 | -8.615850e-47 |
| Msa0230490 | Msa0698660 | 0.807668 | 4.516461e-50 | -8.615850e-47 |
| Msa0230490 | Msa0698780 | 0.888945 | 3.762520e-73 | -8.615850e-47 |
| Msa0230490 | Msa0706500 | 0.826789 | 2.236577e-54 | -8.615850e-47 |
| Msa0230490 | Msa0712610 | 0.827580 | 1.446130e-54 | -8.615850e-47 |
| Msa0230490 | Msa0725440 | 0.841442 | 4.740444e-58 | -8.615850e-47 |
| Msa0230490 | Msa0729200 | 0.852207 | 5.372738e-61 | -8.615850e-47 |
| Msa0230490 | Msa0738100 | 0.813847 | 2.080201e-51 | -8.615850e-47 |
| Msa0230490 | Msa0766080 | 0.850666 | 1.464975e-60 | -8.615850e-47 |
| Msa0230490 | Msa0769590 | 0.856089 | 4.070739e-62 | -8.615850e-47 |
| Msa0230490 | Msa0781080 | 0.886651 | 2.840068e-72 | -8.615850e-47 |
| Msa0230490 | Msa0785130 | 0.870229 | 1.708135e-66 | -8.615850e-47 |
| Msa0230490 | Msa0806880 | 0.864045 | 1.612037e-64 | -8.615850e-47 |
| Msa0230490 | Msa0808800 | 0.860795 | 1.610208e-63 | -8.615850e-47 |
| Msa0230490 | Msa0817540 | 0.860037 | 2.731309e-63 | -8.615850e-47 |
| Msa0230490 | Msa0827380 | 0.814882 | 1.228194e-51 | -8.615850e-47 |
| Msa0230490 | Msa0845550 | 0.801684 | 8.015714e-49 | -8.615850e-47 |
| Msa0230490 | Msa0861320 | 0.816041 | 6.783245e-52 | -8.615850e-47 |
| Msa0230490 | Msa0867060 | 0.872413 | 3.241311e-67 | -8.615850e-47 |
| Msa0230490 | Msa0876170 | 0.825260 | 5.163691e-54 | -8.615850e-47 |
| Msa0230490 | Msa0881290 | 0.865350 | 6.293281e-65 | -8.615850e-47 |
| Msa0230490 | Msa0888810 | 0.843739 | 1.164092e-58 | -8.615850e-47 |
| Msa0230490 | Msa0945480 | 0.813248 | 2.818172e-51 | -8.615850e-47 |
| Msa0230490 | Msa0953310 | 0.829772 | 4.269912e-55 | -8.615850e-47 |
| Msa0230490 | Msa1006840 | 0.818619 | 1.783111e-52 | -8.615850e-47 |
| Msa0230490 | Msa1010310 | 0.837927 | 3.893909e-57 | -8.615850e-47 |
| Msa0230490 | Msa1012740 | 0.861399 | 1.054209e-63 | -8.615850e-47 |
| Msa0230490 | Msa1019240 | 0.854271 | 1.375777e-61 | -8.615850e-47 |
| Msa0230490 | Msa1019260 | 0.857038 | 2.142830e-62 | -8.615850e-47 |
| Msa0230490 | Msa1021470 | 0.841139 | 5.696364e-58 | -8.615850e-47 |
| Msa0230490 | Msa1039520 | 0.864333 | 1.311714e-64 | -8.615850e-47 |
| Msa0230490 | Msa1043690 | 0.821841 | 3.258081e-53 | -8.615850e-47 |
| Msa0230490 | Msa1072710 | 0.842193 | 3.003501e-58 | -8.615850e-47 |
| Msa0230490 | Msa1078870 | 0.821515 | 3.875992e-53 | -8.615850e-47 |
| Msa0230490 | Msa1078980 | 0.806547 | 7.800095e-50 | -8.615850e-47 |
| Msa0230490 | Msa1080290 | 0.805328 | 1.407480e-49 | -8.615850e-47 |
| Msa0230490 | Msa1080350 | 0.841718 | 4.009718e-58 | -8.615850e-47 |
| Msa0230490 | Msa1089220 | 0.810124 | 1.347005e-50 | -8.615850e-47 |
| Msa0230490 | Msa1094380 | 0.823239 | 1.541612e-53 | -8.615850e-47 |
| Msa0230490 | Msa1104140 | 0.845371 | 4.233229e-59 | -8.615850e-47 |
| Msa0230490 | Msa1104210 | 0.865214 | 6.944826e-65 | -8.615850e-47 |
| Msa0230490 | Msa1105460 | 0.814686 | 1.357708e-51 | -8.615850e-47 |
| Msa0230490 | Msa1122310 | -0.810348 | 1.205108e-50 | -8.615850e-47 |
| Msa0230490 | Msa1125860 | 0.842579 | 2.372108e-58 | -8.615850e-47 |
| Msa0230490 | Msa1126060 | 0.839790 | 1.283786e-57 | -8.615850e-47 |
| Msa0230490 | Msa1126510 | 0.803080 | 4.135634e-49 | -8.615850e-47 |
| Msa0230490 | Msa1126830 | 0.847355 | 1.218667e-59 | -8.615850e-47 |
| Msa0230490 | Msa1135890 | 0.822830 | 1.920547e-53 | -8.615850e-47 |
| Msa0230490 | Msa1143650 | 0.803646 | 3.156976e-49 | -8.615850e-47 |
| Msa0230490 | Msa1148910 | 0.836266 | 1.035198e-56 | -8.615850e-47 |
| Msa0230490 | Msa1165780 | 0.849000 | 4.281450e-60 | -8.615850e-47 |
| Msa0230490 | Msa1166860 | 0.810454 | 1.143718e-50 | -8.615850e-47 |
| Msa0230490 | Msa1166870 | 0.837603 | 4.715765e-57 | -8.615850e-47 |
| Msa0230490 | Msa1167540 | 0.819743 | 9.895337e-53 | -8.615850e-47 |
| Msa0230490 | Msa1174780 | 0.811617 | 6.402015e-51 | -8.615850e-47 |
| Msa0230490 | Msa1175350 | 0.807526 | 4.841879e-50 | -8.615850e-47 |
| Msa0230490 | Msa1195300 | 0.830609 | 2.666492e-55 | -8.615850e-47 |
| Msa0230490 | Msa1208020 | 0.853535 | 2.241335e-61 | -8.615850e-47 |
| Msa0230490 | Msa1215820 | 0.855146 | 7.670508e-62 | -8.615850e-47 |
| Msa0230490 | Msa1230580 | 0.846721 | 1.818160e-59 | -8.615850e-47 |
| Msa0230490 | Msa1241190 | 0.815958 | 7.079369e-52 | -8.615850e-47 |
| Msa0230490 | Msa1256840 | 0.821980 | 3.026100e-53 | -8.615850e-47 |
| Msa0230490 | Msa1258630 | 0.809969 | 1.454580e-50 | -8.615850e-47 |
| Msa0230490 | Msa1258710 | 0.815818 | 7.607372e-52 | -8.615850e-47 |
| Msa0230490 | Msa1262890 | 0.867558 | 1.252616e-65 | -8.615850e-47 |
| Msa0230490 | Msa1266060 | 0.869416 | 3.148386e-66 | -8.615850e-47 |
| Msa0230490 | Msa1273340 | 0.836823 | 7.463400e-57 | -8.615850e-47 |
| Msa0230490 | Msa1275680 | 0.806906 | 6.550574e-50 | -8.615850e-47 |
| Msa0230490 | Msa1299590 | 0.857189 | 1.933704e-62 | -8.615850e-47 |
| Msa0230490 | Msa1305050 | 0.812399 | 4.323832e-51 | -8.615850e-47 |
| Msa0230490 | Msa1311400 | 0.824070 | 9.848683e-54 | -8.615850e-47 |
| Msa0230490 | Msa1315890 | 0.821509 | 3.888994e-53 | -8.615850e-47 |
| Msa0230490 | Msa1331250 | 0.813778 | 2.154927e-51 | -8.615850e-47 |
| Msa0230490 | Msa1332250 | 0.870242 | 1.691988e-66 | -8.615850e-47 |
| Msa0230490 | Msa1338190 | 0.875708 | 2.490151e-68 | -8.615850e-47 |
| Msa0230490 | Msa1343260 | 0.873006 | 2.052871e-67 | -8.615850e-47 |
| Msa0230490 | Msa1349570 | 0.843555 | 1.303653e-58 | -8.615850e-47 |
| Msa0230490 | Msa1356790 | 0.824112 | 9.629892e-54 | -8.615850e-47 |
| Msa0230490 | Msa1357350 | 0.835127 | 2.010569e-56 | -8.615850e-47 |
| Msa0230490 | Msa1362210 | 0.823103 | 1.658521e-53 | -8.615850e-47 |
| Msa0230490 | Msa1362790 | 0.854976 | 8.596114e-62 | -8.615850e-47 |
| Msa0230490 | Msa1363330 | 0.861500 | 9.821619e-64 | -8.615850e-47 |
| Msa0230490 | Msa1364480 | 0.821417 | 4.083818e-53 | -8.615850e-47 |
| Msa0230490 | Msa1369190 | 0.846771 | 1.761972e-59 | -8.615850e-47 |
| Msa0230490 | Msa1374120 | 0.817686 | 2.899270e-52 | -8.615850e-47 |
| Msa0230490 | Msa1379760 | 0.842701 | 2.201371e-58 | -8.615850e-47 |
| Msa0230490 | Msa1386600 | 0.861615 | 9.061134e-64 | -8.615850e-47 |
| Msa0230490 | Msa1392590 | 0.807988 | 3.861781e-50 | -8.615850e-47 |
| Msa0230490 | Msa1399530 | 0.814644 | 1.386788e-51 | -8.615850e-47 |
| Msa0230490 | Msa1406080 | 0.825560 | 4.385319e-54 | -8.615850e-47 |
| Msa0230490 | Msa1410440 | 0.864506 | 1.157568e-64 | -8.615850e-47 |
| Msa0230490 | Msa1413260 | 0.818064 | 2.382127e-52 | -8.615850e-47 |
| Msa0230490 | Msa1413500 | 0.859535 | 3.866813e-63 | -8.615850e-47 |
| Msa0230490 | Msa1418770 | 0.839094 | 1.945655e-57 | -8.615850e-47 |
| Msa0230490 | Msa1425670 | 0.825896 | 3.649507e-54 | -8.615850e-47 |
| Msa0230490 | Msa1426120 | 0.836035 | 1.184575e-56 | -8.615850e-47 |
| Msa0230490 | Msa1426370 | 0.816165 | 6.365988e-52 | -8.615850e-47 |
| Msa0230490 | Msa1426490 | 0.844708 | 6.396233e-59 | -8.615850e-47 |
| Msa0230490 | Msa1427560 | 0.837438 | 5.197504e-57 | -8.615850e-47 |
| Msa0230490 | Msa1443300 | 0.801622 | 8.256240e-49 | -8.615850e-47 |
| Msa0230490 | Msa1448690 | 0.814747 | 1.316391e-51 | -8.615850e-47 |
| Msa0230490 | Msa1450280 | 0.802058 | 6.716870e-49 | -8.615850e-47 |
| Msa0230490 | Msa1456050 | 0.826697 | 2.352529e-54 | -8.615850e-47 |
| Msa0230490 | Msa1462860 | 0.801911 | 7.199846e-49 | -8.615850e-47 |
| Msa0230490 | Msa1465260 | 0.837602 | 4.718704e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230490 | MtrunA17_Chr1g0192271 | 98.930 | 187 | 2 | 0 | 1 | 187 | 1 | 187 | 6.22e-133 | 370 |
| Msa0230490 | MtrunA17_Chr7g0269451 | 92.021 | 188 | 14 | 1 | 1 | 187 | 1 | 188 | 1.91e-122 | 343 |
| Msa0230490 | MtrunA17_Chr7g0272381 | 85.561 | 187 | 27 | 0 | 1 | 187 | 1 | 187 | 6.27e-117 | 329 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230490 | AT5G27850.1 | 83.957 | 187 | 30 | 0 | 1 | 187 | 1 | 187 | 1.16e-113 | 321 |
| Msa0230490 | AT3G05590.1 | 83.422 | 187 | 31 | 0 | 1 | 187 | 1 | 187 | 3.89e-113 | 320 |
| Msa0230490 | AT2G47570.1 | 76.344 | 186 | 43 | 1 | 3 | 187 | 1 | 186 | 1.56e-100 | 288 |
| Msa0230490 | AT3G05590.3 | 82.836 | 134 | 23 | 0 | 54 | 187 | 1 | 134 | 3.91e-79 | 232 |
| Msa0230490 | AT3G05590.2 | 82.836 | 134 | 23 | 0 | 54 | 187 | 1 | 134 | 3.91e-79 | 232 |
| Msa0230490 | AT5G27850.2 | 82.090 | 134 | 24 | 0 | 54 | 187 | 1 | 134 | 1.39e-77 | 228 |
Find 74 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCGATCAGTTGGCTCTT+AGG | 0.165548 | 2_2:-2684735 | Msa0230490:CDS |
| AAACACATCCACAGAAAATA+AGG | 0.228828 | 2_2:+2683776 | None:intergenic |
| TATTCTTGCCCTTGCCTTCT+CGG | 0.231639 | 2_2:+2684783 | None:intergenic |
| AGATAGATATCATTGGATTT+TGG | 0.265066 | 2_2:+2685891 | None:intergenic |
| ACTGCTTCACGAGCATTCTT+TGG | 0.271538 | 2_2:+2684040 | None:intergenic |
| TGATATCTATCTCAAGCTTT+TGG | 0.326212 | 2_2:-2685880 | Msa0230490:CDS |
| ATGTGATGGTATTTCTTTGC+TGG | 0.328786 | 2_2:-2683897 | Msa0230490:three_prime_UTR |
| GTTGGCTCTTAGGGCCCCTC+TGG | 0.332505 | 2_2:-2684725 | Msa0230490:CDS |
| AGCTTTATCGGTTCCTTGTT+CGG | 0.346996 | 2_2:-2685104 | Msa0230490:CDS |
| CGGTTCCTTGTTCGGAGAAC+TGG | 0.351555 | 2_2:-2685096 | Msa0230490:CDS |
| TGGATGCAGGTCCTTCTTAG+AGG | 0.362941 | 2_2:-2684064 | Msa0230490:intron |
| AGACAAACCATGGCTGCTTC+AGG | 0.363489 | 2_2:+2686054 | None:intergenic |
| ATTCGATCAGTTGGCTCTTA+GGG | 0.374062 | 2_2:-2684734 | Msa0230490:CDS |
| CACACCAAACCTTATGTTAG+AGG | 0.380593 | 2_2:-2683980 | Msa0230490:CDS |
| CTTGACTTTCCTCTAACATA+AGG | 0.385554 | 2_2:+2683971 | None:intergenic |
| CTGCTTCACGAGCATTCTTT+GGG | 0.387440 | 2_2:+2684041 | None:intergenic |
| CCTGAGTGCTGTAACCTTGA+TGG | 0.411463 | 2_2:+2684810 | None:intergenic |
| CTTTCCTCTAACATAAGGTT+TGG | 0.422789 | 2_2:+2683976 | None:intergenic |
| GGTAAAATTGCTGTCGTGGT+GGG | 0.429219 | 2_2:-2684871 | Msa0230490:CDS |
| AAGGTTGCTGCTGGTAATAC+AGG | 0.444634 | 2_2:+2686103 | None:intergenic |
| TAAGGTTTGGTGTGGCTTTG+TGG | 0.445512 | 2_2:+2683989 | None:intergenic |
| AAGCTTGAGATAGATATCAT+TGG | 0.447582 | 2_2:+2685884 | None:intergenic |
| AAGCACTTTGGTCGTGCTCC+TGG | 0.452826 | 2_2:-2684016 | Msa0230490:CDS |
| TTTGTAGGGTATCGATCTTA+AGG | 0.453950 | 2_2:-2685949 | Msa0230490:intron |
| CATTCTTTGGGCCTCTAAGA+AGG | 0.473658 | 2_2:+2684053 | None:intergenic |
| AAGGTTTGGTGTGGCTTTGT+GGG | 0.474825 | 2_2:+2683990 | None:intergenic |
| ATCAACCTTGACAAAGATAG+TGG | 0.491899 | 2_2:+2685015 | None:intergenic |
| TGCTCCACCAAGGTTGCTGC+TGG | 0.492220 | 2_2:+2686094 | None:intergenic |
| GTGTGGCTTTGTGGGACACC+AGG | 0.492305 | 2_2:+2683998 | None:intergenic |
| GTAAAATTGCTGTCGTGGTG+GGG | 0.493129 | 2_2:-2684870 | Msa0230490:CDS |
| CAAGAGGTTGTTTATGAGCA+AGG | 0.493391 | 2_2:-2685049 | Msa0230490:CDS |
| CTCTAACATAAGGTTTGGTG+TGG | 0.503784 | 2_2:+2683981 | None:intergenic |
| GGATTCAGAGTTTGATGTGA+TGG | 0.508515 | 2_2:-2683911 | Msa0230490:exon |
| ATGCTTAACATTCGATCAGT+TGG | 0.511340 | 2_2:-2684743 | Msa0230490:CDS |
| TAATGAAGTTCCAGCCATCA+AGG | 0.511887 | 2_2:-2684824 | Msa0230490:CDS |
| TTGAGAAGGCTAGAGGAAAG+AGG | 0.516701 | 2_2:-2683943 | Msa0230490:CDS |
| AACACATCCACAGAAAATAA+GGG | 0.518981 | 2_2:+2683777 | None:intergenic |
| TGTATTACCAGCAGCAACCT+TGG | 0.520158 | 2_2:-2686101 | Msa0230490:five_prime_UTR |
| CGTGAAGCAGTTAAGCACTT+TGG | 0.533436 | 2_2:-2684028 | Msa0230490:CDS |
| TTGGCTCTTAGGGCCCCTCT+GGG | 0.540521 | 2_2:-2684724 | Msa0230490:CDS |
| AGGTAAAATTGCTGTCGTGG+TGG | 0.541180 | 2_2:-2684872 | Msa0230490:CDS |
| TAAAATTGCTGTCGTGGTGG+GGG | 0.545281 | 2_2:-2684869 | Msa0230490:CDS |
| TCAGGTTTACCGAGAAGGCA+AGG | 0.546899 | 2_2:-2684792 | Msa0230490:CDS |
| TCAATGCTGTTATACTCAAG+AGG | 0.549427 | 2_2:-2685065 | Msa0230490:CDS |
| TGCTGCCAGTTCTCCGAACA+AGG | 0.549972 | 2_2:+2685091 | None:intergenic |
| AGGCAAGGGCAAGAATAGAA+AGG | 0.551093 | 2_2:-2684777 | Msa0230490:CDS |
| AGTGCTGTAACCTTGATGGC+TGG | 0.551868 | 2_2:+2684814 | None:intergenic |
| GGCAAGGGCAAGAATAGAAA+GGG | 0.553936 | 2_2:-2684776 | Msa0230490:CDS |
| AGATTGACAAACCTTGCCAT+TGG | 0.555253 | 2_2:+2684984 | None:intergenic |
| TAGGGTATCGATCTTAAGGC+AGG | 0.555670 | 2_2:-2685945 | Msa0230490:CDS |
| TTGAAGACCTGAAGCAGCCA+TGG | 0.558411 | 2_2:-2686061 | Msa0230490:intron |
| AGCACTCAGGTTTACCGAGA+AGG | 0.559032 | 2_2:-2684797 | Msa0230490:CDS |
| CCATCAAGGTTACAGCACTC+AGG | 0.567655 | 2_2:-2684810 | Msa0230490:CDS |
| TGGTTTCAAAACGAAGGTGG+CGG | 0.569398 | 2_2:+2683597 | None:intergenic |
| AACCTCCACTATCTTTGTCA+AGG | 0.576324 | 2_2:-2685020 | Msa0230490:CDS |
| ATTACCAGCAGCAACCTTGG+TGG | 0.579768 | 2_2:-2686098 | Msa0230490:five_prime_UTR |
| GGCCCCTCTGGGACAAAACA+CGG | 0.583895 | 2_2:-2684713 | Msa0230490:intron |
| CCACAGAAAATAAGGGAGCA+AGG | 0.584160 | 2_2:+2683784 | None:intergenic |
| TCTGTTTGGTTTCAAAACGA+AGG | 0.596375 | 2_2:+2683591 | None:intergenic |
| GTTTGGTTTCAAAACGAAGG+TGG | 0.603989 | 2_2:+2683594 | None:intergenic |
| AGGAAGATTGAGAAGGCTAG+AGG | 0.612753 | 2_2:-2683950 | Msa0230490:CDS |
| AGGGCAAGAATAGAAAGGGC+TGG | 0.616183 | 2_2:-2684772 | Msa0230490:CDS |
| CAGGTTTACCGAGAAGGCAA+GGG | 0.616460 | 2_2:-2684791 | Msa0230490:CDS |
| GATCAAGTATACCAATGGCA+AGG | 0.626076 | 2_2:-2684995 | Msa0230490:intron |
| AAAGTCAAGGAAGATTGAGA+AGG | 0.626317 | 2_2:-2683957 | Msa0230490:CDS |
| TGGCTGGAACTTCATTAACA+CGG | 0.640444 | 2_2:+2684830 | None:intergenic |
| AGGTTGATCAAGTATACCAA+TGG | 0.643281 | 2_2:-2685000 | Msa0230490:CDS |
| AACCTTGACAAAGATAGTGG+AGG | 0.643571 | 2_2:+2685018 | None:intergenic |
| GGAAGGTAAAATTGCTGTCG+TGG | 0.652028 | 2_2:-2684875 | Msa0230490:CDS |
| AGAGGAAAGAGGAAGAGCAG+AGG | 0.670040 | 2_2:-2683932 | Msa0230490:CDS |
| CACGCGCGACTGCTCCACCA+AGG | 0.673017 | 2_2:+2686084 | None:intergenic |
| GGTATCGATCTTAAGGCAGG+AGG | 0.692243 | 2_2:-2685942 | Msa0230490:CDS |
| CTTATGTTAGAGGAAAGTCA+AGG | 0.705037 | 2_2:-2683970 | Msa0230490:CDS |
| GCAAGAATAGAAAGGGCTGG+TGG | 0.708893 | 2_2:-2684769 | Msa0230490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTCAAAATATTATTAT+GGG | - | chr2_2:2684235-2684254 | Msa0230490:intron | 10.0% |
| !! | AGTCAAAAAAAAAAATCATT+GGG | + | chr2_2:2684018-2684037 | None:intergenic | 15.0% |
| !! | TAGTCAAAAAAAAAAATCAT+TGG | + | chr2_2:2684019-2684038 | None:intergenic | 15.0% |
| !! | AATGAAATATAACCAAAAAT+AGG | + | chr2_2:2684185-2684204 | None:intergenic | 15.0% |
| !!! | CTGTTTTCAAAATATTATTA+TGG | - | chr2_2:2684234-2684253 | Msa0230490:intron | 15.0% |
| !!! | TATTGTTGTTTTAAAAAACA+AGG | - | chr2_2:2684331-2684350 | Msa0230490:intron | 15.0% |
| !!! | TTAATAGAAGTGATTTTTAT+GGG | - | chr2_2:2684397-2684416 | Msa0230490:intron | 15.0% |
| !!! | GTTTTAGCTTTATAAAAAAA+TGG | + | chr2_2:2684500-2684519 | None:intergenic | 15.0% |
| !!! | TTAATTTTAAGCAAAGATTT+AGG | + | chr2_2:2685389-2685408 | None:intergenic | 15.0% |
| !!! | AATCTTTTCTTAAAATTAAC+TGG | - | chr2_2:2685506-2685525 | Msa0230490:intron | 15.0% |
| !!! | ATCTTTTCTTAAAATTAACT+GGG | - | chr2_2:2685507-2685526 | Msa0230490:intron | 15.0% |
| !!! | AAGTTTAATTTATAATGCTG+AGG | - | chr2_2:2684066-2684085 | Msa0230490:intron | 20.0% |
| !!! | AGTTTAATTTATAATGCTGA+GGG | - | chr2_2:2684067-2684086 | Msa0230490:intron | 20.0% |
| !!! | TTTTTGGTTATATTTCATTG+CGG | - | chr2_2:2684186-2684205 | Msa0230490:intron | 20.0% |
| !!! | GTTAATAGAAGTGATTTTTA+TGG | - | chr2_2:2684396-2684415 | Msa0230490:intron | 20.0% |
| !! | TAGATATATGAGAAAAATGA+GGG | + | chr2_2:2684530-2684549 | None:intergenic | 20.0% |
| !!! | TTACATTGAATTGTTTTGAT+TGG | - | chr2_2:2684604-2684623 | Msa0230490:intron | 20.0% |
| !! | TCAGTTTACTATAGTTATAA+TGG | - | chr2_2:2684820-2684839 | Msa0230490:CDS | 20.0% |
| !! | TACATAGGTAAATTTCAAAA+TGG | + | chr2_2:2684849-2684868 | None:intergenic | 20.0% |
| !!! | ATTTTGAAATTTACCTATGT+AGG | - | chr2_2:2684848-2684867 | Msa0230490:CDS | 20.0% |
| !! | ATAATATAATATTTGGATGC+AGG | - | chr2_2:2685667-2685686 | Msa0230490:intron | 20.0% |
| !!! | TTTGATAATGATTTTCAGTA+TGG | - | chr2_2:2685927-2685946 | Msa0230490:CDS | 20.0% |
| !!! | CTAGATTTTCTAAATTACAT+TGG | - | chr2_2:2686086-2686105 | Msa0230490:five_prime_UTR | 20.0% |
| !! | AGATAGATATCATTGGATTT+TGG | + | chr2_2:2683856-2683875 | None:intergenic | 25.0% |
| ! | AGAAATAACATAAAGCTACA+GGG | + | chr2_2:2683947-2683966 | None:intergenic | 25.0% |
| ! | AAGAAATAACATAAAGCTAC+AGG | + | chr2_2:2683948-2683967 | None:intergenic | 25.0% |
| !! | TGTCATTGACAAACAATTTT+AGG | - | chr2_2:2683972-2683991 | Msa0230490:CDS | 25.0% |
| ! | TGTTGAAATGTAAGCAAAAA+TGG | - | chr2_2:2684149-2684168 | Msa0230490:intron | 25.0% |
| ! | GTTGAAATGTAAGCAAAAAT+GGG | - | chr2_2:2684150-2684169 | Msa0230490:intron | 25.0% |
| !!! | TGTTGTTTTAAAAAACAAGG+AGG | - | chr2_2:2684334-2684353 | Msa0230490:intron | 25.0% |
| ! | GTAGATATATGAGAAAAATG+AGG | + | chr2_2:2684531-2684550 | None:intergenic | 25.0% |
| !!! | TTTTACATGATCAGCTTTAT+CGG | - | chr2_2:2684628-2684647 | Msa0230490:intron | 25.0% |
| ! | CAAAAAGACGTTAAATAATC+AGG | + | chr2_2:2685152-2685171 | None:intergenic | 25.0% |
| !!! | TCTTTAAAATTAACTGTCTG+AGG | - | chr2_2:2685270-2685289 | Msa0230490:intron | 25.0% |
| !!! | TAGTTTTGTGTTCTTTATTG+TGG | - | chr2_2:2685303-2685322 | Msa0230490:intron | 25.0% |
| !!! | AGTTTTGTGTTCTTTATTGT+GGG | - | chr2_2:2685304-2685323 | Msa0230490:intron | 25.0% |
| ! | TATAACTTTGATCTTGAACA+AGG | + | chr2_2:2685349-2685368 | None:intergenic | 25.0% |
| !! | TTTTCTTAAAATTAACTGGG+AGG | - | chr2_2:2685510-2685529 | Msa0230490:intron | 25.0% |
| ! | TATAGTTGTGTTCTTTATTG+TGG | - | chr2_2:2685541-2685560 | Msa0230490:intron | 25.0% |
| ! | AAGGTTTGATAGAATGAAAA+AGG | - | chr2_2:2685618-2685637 | Msa0230490:intron | 25.0% |
| !!! | AGTTTTGATGTTAGAGAATT+GGG | - | chr2_2:2686008-2686027 | Msa0230490:intron | 25.0% |
| AACGTAAGAAACAGAAACAA+TGG | + | chr2_2:2683765-2683784 | None:intergenic | 30.0% | |
| ACGTTTGAATTGAACTTTGT+AGG | - | chr2_2:2683780-2683799 | Msa0230490:three_prime_UTR | 30.0% | |
| CGTTTGAATTGAACTTTGTA+GGG | - | chr2_2:2683781-2683800 | Msa0230490:three_prime_UTR | 30.0% | |
| AAGCTTGAGATAGATATCAT+TGG | + | chr2_2:2683863-2683882 | None:intergenic | 30.0% | |
| ! | TGATATCTATCTCAAGCTTT+TGG | - | chr2_2:2683864-2683883 | Msa0230490:three_prime_UTR | 30.0% |
| TTGCTTACATTTCAACATAG+AGG | + | chr2_2:2684146-2684165 | None:intergenic | 30.0% | |
| TATTATGGGTGTGTTTGTTT+AGG | - | chr2_2:2684249-2684268 | Msa0230490:intron | 30.0% | |
| ! | GGAAAAGCTAACTCATTTTA+GGG | + | chr2_2:2684297-2684316 | None:intergenic | 30.0% |
| ! | AGGAAAAGCTAACTCATTTT+AGG | + | chr2_2:2684298-2684317 | None:intergenic | 30.0% |
| TGAAATTTACCTATGTAGGA+AGG | - | chr2_2:2684852-2684871 | Msa0230490:CDS | 30.0% | |
| !! | TGATTGAACTTTTGAGAGTA+TGG | - | chr2_2:2685170-2685189 | Msa0230490:intron | 30.0% |
| ! | TTTTCTCTACTCTCTAACAA+AGG | - | chr2_2:2685442-2685461 | Msa0230490:intron | 30.0% |
| TGTGTAACTATTGTGATGTA+AGG | - | chr2_2:2685599-2685618 | Msa0230490:intron | 30.0% | |
| AACACATCCACAGAAAATAA+GGG | + | chr2_2:2685970-2685989 | None:intergenic | 30.0% | |
| AAACACATCCACAGAAAATA+AGG | + | chr2_2:2685971-2685990 | None:intergenic | 30.0% | |
| !! | CAGTTTTGATGTTAGAGAAT+TGG | - | chr2_2:2686007-2686026 | Msa0230490:intron | 30.0% |
| TACAGGTAGAGAAAAAGCTA+GGG | + | chr2_2:2683627-2683646 | None:intergenic | 35.0% | |
| ATACAGGTAGAGAAAAAGCT+AGG | + | chr2_2:2683628-2683647 | None:intergenic | 35.0% | |
| GTTTAAGAGAAGACAAACCA+TGG | + | chr2_2:2683703-2683722 | None:intergenic | 35.0% | |
| !! | TTTGTAGGGTATCGATCTTA+AGG | - | chr2_2:2683795-2683814 | Msa0230490:three_prime_UTR | 35.0% |
| ! | GGGTCGAAAAAACCTATTTT+TGG | - | chr2_2:2684170-2684189 | Msa0230490:intron | 35.0% |
| TGGTTATATTTCATTGCGGA+TGG | - | chr2_2:2684190-2684209 | Msa0230490:intron | 35.0% | |
| TCAATGCTGTTATACTCAAG+AGG | - | chr2_2:2684679-2684698 | Msa0230490:intron | 35.0% | |
| ATCAACCTTGACAAAGATAG+TGG | + | chr2_2:2684732-2684751 | None:intergenic | 35.0% | |
| ! | AGGTTGATCAAGTATACCAA+TGG | - | chr2_2:2684744-2684763 | Msa0230490:CDS | 35.0% |
| ! | GCAATTTTACCTTCCTACAT+AGG | + | chr2_2:2684864-2684883 | None:intergenic | 35.0% |
| ATGCTTAACATTCGATCAGT+TGG | - | chr2_2:2685001-2685020 | Msa0230490:CDS | 35.0% | |
| CACTATAGTGATTCCTTTGT+TGG | + | chr2_2:2685215-2685234 | None:intergenic | 35.0% | |
| ! | GTGCTATTGCTGTCATTTAA+TGG | - | chr2_2:2685232-2685251 | Msa0230490:intron | 35.0% |
| !! | GCTGTCATTTAATGGATTGA+TGG | - | chr2_2:2685240-2685259 | Msa0230490:intron | 35.0% |
| ! | GCTGTCATTTATTGGATTGA+TGG | - | chr2_2:2685483-2685502 | Msa0230490:intron | 35.0% |
| CTTTCCTCTAACATAAGGTT+TGG | + | chr2_2:2685771-2685790 | None:intergenic | 35.0% | |
| CTTGACTTTCCTCTAACATA+AGG | + | chr2_2:2685776-2685795 | None:intergenic | 35.0% | |
| CTTATGTTAGAGGAAAGTCA+AGG | - | chr2_2:2685774-2685793 | Msa0230490:intron | 35.0% | |
| AAAGTCAAGGAAGATTGAGA+AGG | - | chr2_2:2685787-2685806 | Msa0230490:intron | 35.0% | |
| ATGTGATGGTATTTCTTTGC+TGG | - | chr2_2:2685847-2685866 | Msa0230490:intron | 35.0% | |
| ! | CTATCTCAAGCTTTTGGTCA+AGG | - | chr2_2:2683870-2683889 | Msa0230490:three_prime_UTR | 40.0% |
| !! | AGCTTTATCGGTTCCTTGTT+CGG | - | chr2_2:2684640-2684659 | Msa0230490:intron | 40.0% |
| CAAGAGGTTGTTTATGAGCA+AGG | - | chr2_2:2684695-2684714 | Msa0230490:intron | 40.0% | |
| AACCTCCACTATCTTTGTCA+AGG | - | chr2_2:2684724-2684743 | Msa0230490:CDS | 40.0% | |
| ! | AACCTTGACAAAGATAGTGG+AGG | + | chr2_2:2684729-2684748 | None:intergenic | 40.0% |
| GATCAAGTATACCAATGGCA+AGG | - | chr2_2:2684749-2684768 | Msa0230490:CDS | 40.0% | |
| AGATTGACAAACCTTGCCAT+TGG | + | chr2_2:2684763-2684782 | None:intergenic | 40.0% | |
| TGGCTGGAACTTCATTAACA+CGG | + | chr2_2:2684917-2684936 | None:intergenic | 40.0% | |
| TAATGAAGTTCCAGCCATCA+AGG | - | chr2_2:2684920-2684939 | Msa0230490:intron | 40.0% | |
| ! | ATTCGATCAGTTGGCTCTTA+GGG | - | chr2_2:2685010-2685029 | Msa0230490:CDS | 40.0% |
| TTCTCTCTAGTCTCCAACAA+AGG | - | chr2_2:2685199-2685218 | Msa0230490:intron | 40.0% | |
| ATTGTGGGCGAATATGTTTC+AGG | - | chr2_2:2685319-2685338 | Msa0230490:intron | 40.0% | |
| ! | GTGCTGTTGCTGTCATTTAT+TGG | - | chr2_2:2685475-2685494 | Msa0230490:intron | 40.0% |
| ! | TTCACATTTTCCCTCTGTAG+CGG | - | chr2_2:2685574-2685593 | Msa0230490:intron | 40.0% |
| GAATGAAAAAGGTTACGCTG+AGG | - | chr2_2:2685629-2685648 | Msa0230490:intron | 40.0% | |
| !! | CTCTAACATAAGGTTTGGTG+TGG | + | chr2_2:2685766-2685785 | None:intergenic | 40.0% |
| CACACCAAACCTTATGTTAG+AGG | - | chr2_2:2685764-2685783 | Msa0230490:intron | 40.0% | |
| GGATTCAGAGTTTGATGTGA+TGG | - | chr2_2:2685833-2685852 | Msa0230490:intron | 40.0% | |
| AAGGTTGCTGCTGGTAATAC+AGG | + | chr2_2:2683644-2683663 | None:intergenic | 45.0% | |
| TGTATTACCAGCAGCAACCT+TGG | - | chr2_2:2683643-2683662 | Msa0230490:three_prime_UTR | 45.0% | |
| !! | TAGGGTATCGATCTTAAGGC+AGG | - | chr2_2:2683799-2683818 | Msa0230490:three_prime_UTR | 45.0% |
| GGAAGGTAAAATTGCTGTCG+TGG | - | chr2_2:2684869-2684888 | Msa0230490:CDS | 45.0% | |
| AGGTAAAATTGCTGTCGTGG+TGG | - | chr2_2:2684872-2684891 | Msa0230490:CDS | 45.0% | |
| GGTAAAATTGCTGTCGTGGT+GGG | - | chr2_2:2684873-2684892 | Msa0230490:CDS | 45.0% | |
| GTAAAATTGCTGTCGTGGTG+GGG | - | chr2_2:2684874-2684893 | Msa0230490:CDS | 45.0% | |
| TAAAATTGCTGTCGTGGTGG+GGG | - | chr2_2:2684875-2684894 | Msa0230490:CDS | 45.0% | |
| TATTCTTGCCCTTGCCTTCT+CGG | + | chr2_2:2684964-2684983 | None:intergenic | 45.0% | |
| AGGCAAGGGCAAGAATAGAA+AGG | - | chr2_2:2684967-2684986 | Msa0230490:intron | 45.0% | |
| GGCAAGGGCAAGAATAGAAA+GGG | - | chr2_2:2684968-2684987 | Msa0230490:intron | 45.0% | |
| ! | CATTCGATCAGTTGGCTCTT+AGG | - | chr2_2:2685009-2685028 | Msa0230490:CDS | 45.0% |
| ! | ATACCGTGTTTTGTCCCAGA+GGG | + | chr2_2:2685037-2685056 | None:intergenic | 45.0% |
| GTTACACAAACCGCTACAGA+GGG | + | chr2_2:2685587-2685606 | None:intergenic | 45.0% | |
| AGTTACACAAACCGCTACAG+AGG | + | chr2_2:2685588-2685607 | None:intergenic | 45.0% | |
| AGGTTACGCTGAGGTTATAG+AGG | - | chr2_2:2685638-2685657 | Msa0230490:intron | 45.0% | |
| ! | CATTCTTTGGGCCTCTAAGA+AGG | + | chr2_2:2685694-2685713 | None:intergenic | 45.0% |
| CTGCTTCACGAGCATTCTTT+GGG | + | chr2_2:2685706-2685725 | None:intergenic | 45.0% | |
| ACTGCTTCACGAGCATTCTT+TGG | + | chr2_2:2685707-2685726 | None:intergenic | 45.0% | |
| CGTGAAGCAGTTAAGCACTT+TGG | - | chr2_2:2685716-2685735 | Msa0230490:intron | 45.0% | |
| !! | AAGGTTTGGTGTGGCTTTGT+GGG | + | chr2_2:2685757-2685776 | None:intergenic | 45.0% |
| !! | TAAGGTTTGGTGTGGCTTTG+TGG | + | chr2_2:2685758-2685777 | None:intergenic | 45.0% |
| AGGAAGATTGAGAAGGCTAG+AGG | - | chr2_2:2685794-2685813 | Msa0230490:intron | 45.0% | |
| TTGAGAAGGCTAGAGGAAAG+AGG | - | chr2_2:2685801-2685820 | Msa0230490:intron | 45.0% | |
| CCACAGAAAATAAGGGAGCA+AGG | + | chr2_2:2685963-2685982 | None:intergenic | 45.0% | |
| !!! | CCTTGCTCCCTTATTTTCTG+TGG | - | chr2_2:2685960-2685979 | Msa0230490:intron | 45.0% |
| !! | AACAATAATAATAATAATTT+AGG | + | chr2_2:2684318-2684337 | None:intergenic | 5.0% |
| !!! | GATTTTAATAATATAATATT+TGG | - | chr2_2:2685660-2685679 | Msa0230490:intron | 5.0% |
| ATTACCAGCAGCAACCTTGG+TGG | - | chr2_2:2683646-2683665 | Msa0230490:three_prime_UTR | 50.0% | |
| TTGAAGACCTGAAGCAGCCA+TGG | - | chr2_2:2683683-2683702 | Msa0230490:three_prime_UTR | 50.0% | |
| AGACAAACCATGGCTGCTTC+AGG | + | chr2_2:2683693-2683712 | None:intergenic | 50.0% | |
| !! | GGTATCGATCTTAAGGCAGG+AGG | - | chr2_2:2683802-2683821 | Msa0230490:three_prime_UTR | 50.0% |
| ! | AGTGCTGTAACCTTGATGGC+TGG | + | chr2_2:2684933-2684952 | None:intergenic | 50.0% |
| ! | CCTGAGTGCTGTAACCTTGA+TGG | + | chr2_2:2684937-2684956 | None:intergenic | 50.0% |
| CCATCAAGGTTACAGCACTC+AGG | - | chr2_2:2684934-2684953 | Msa0230490:intron | 50.0% | |
| AGCACTCAGGTTTACCGAGA+AGG | - | chr2_2:2684947-2684966 | Msa0230490:intron | 50.0% | |
| TCAGGTTTACCGAGAAGGCA+AGG | - | chr2_2:2684952-2684971 | Msa0230490:intron | 50.0% | |
| CAGGTTTACCGAGAAGGCAA+GGG | - | chr2_2:2684953-2684972 | Msa0230490:intron | 50.0% | |
| AGGGCAAGAATAGAAAGGGC+TGG | - | chr2_2:2684972-2684991 | Msa0230490:intron | 50.0% | |
| GCAAGAATAGAAAGGGCTGG+TGG | - | chr2_2:2684975-2684994 | Msa0230490:intron | 50.0% | |
| ! | TACCGTGTTTTGTCCCAGAG+GGG | + | chr2_2:2685036-2685055 | None:intergenic | 50.0% |
| ! | CATACCGTGTTTTGTCCCAG+AGG | + | chr2_2:2685038-2685057 | None:intergenic | 50.0% |
| TGGATGCAGGTCCTTCTTAG+AGG | - | chr2_2:2685680-2685699 | Msa0230490:intron | 50.0% | |
| AGAGGAAAGAGGAAGAGCAG+AGG | - | chr2_2:2685812-2685831 | Msa0230490:intron | 50.0% | |
| CGGTTCCTTGTTCGGAGAAC+TGG | - | chr2_2:2684648-2684667 | Msa0230490:intron | 55.0% | |
| TGCTGCCAGTTCTCCGAACA+AGG | + | chr2_2:2684656-2684675 | None:intergenic | 55.0% | |
| AAGCACTTTGGTCGTGCTCC+TGG | - | chr2_2:2685728-2685747 | Msa0230490:intron | 55.0% | |
| TGCTCCACCAAGGTTGCTGC+TGG | + | chr2_2:2683653-2683672 | None:intergenic | 60.0% | |
| ! | TTGGCTCTTAGGGCCCCTCT+GGG | - | chr2_2:2685020-2685039 | Msa0230490:CDS | 60.0% |
| !! | GGCCCCTCTGGGACAAAACA+CGG | - | chr2_2:2685031-2685050 | Msa0230490:CDS | 60.0% |
| !! | GTGTGGCTTTGTGGGACACC+AGG | + | chr2_2:2685749-2685768 | None:intergenic | 60.0% |
| ! | GTTGGCTCTTAGGGCCCCTC+TGG | - | chr2_2:2685019-2685038 | Msa0230490:CDS | 65.0% |
| CACGCGCGACTGCTCCACCA+AGG | + | chr2_2:2683663-2683682 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 2683603 | 2686163 | 2683603 | ID=Msa0230490;Name=Msa0230490 |
| chr2_2 | mRNA | 2683603 | 2686163 | 2683603 | ID=Msa0230490-mRNA-1;Parent=Msa0230490;Name=Msa0230490-mRNA-1;_AED=0.33;_eAED=0.33;_QI=99|1|1|1|1|1|5|316|187 |
| chr2_2 | exon | 2683603 | 2684077 | 2683603 | ID=Msa0230490-mRNA-1:exon:892;Parent=Msa0230490-mRNA-1 |
| chr2_2 | exon | 2684714 | 2684896 | 2684714 | ID=Msa0230490-mRNA-1:exon:891;Parent=Msa0230490-mRNA-1 |
| chr2_2 | exon | 2684996 | 2685124 | 2684996 | ID=Msa0230490-mRNA-1:exon:890;Parent=Msa0230490-mRNA-1 |
| chr2_2 | exon | 2685875 | 2685964 | 2685875 | ID=Msa0230490-mRNA-1:exon:889;Parent=Msa0230490-mRNA-1 |
| chr2_2 | exon | 2686062 | 2686163 | 2686062 | ID=Msa0230490-mRNA-1:exon:888;Parent=Msa0230490-mRNA-1 |
| chr2_2 | five_prime_UTR | 2686065 | 2686163 | 2686065 | ID=Msa0230490-mRNA-1:five_prime_utr;Parent=Msa0230490-mRNA-1 |
| chr2_2 | CDS | 2686062 | 2686064 | 2686062 | ID=Msa0230490-mRNA-1:cds;Parent=Msa0230490-mRNA-1 |
| chr2_2 | CDS | 2685875 | 2685964 | 2685875 | ID=Msa0230490-mRNA-1:cds;Parent=Msa0230490-mRNA-1 |
| chr2_2 | CDS | 2684996 | 2685124 | 2684996 | ID=Msa0230490-mRNA-1:cds;Parent=Msa0230490-mRNA-1 |
| chr2_2 | CDS | 2684714 | 2684896 | 2684714 | ID=Msa0230490-mRNA-1:cds;Parent=Msa0230490-mRNA-1 |
| chr2_2 | CDS | 2683919 | 2684077 | 2683919 | ID=Msa0230490-mRNA-1:cds;Parent=Msa0230490-mRNA-1 |
| chr2_2 | three_prime_UTR | 2683603 | 2683918 | 2683603 | ID=Msa0230490-mRNA-1:three_prime_utr;Parent=Msa0230490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
