AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0376060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376060 MtrunA17_Chr3g0126541 99.299 713 5 0 1 713 1 713 0.0 1467
Msa0376060 MtrunA17_Chr1g0158861 78.631 716 147 4 2 713 3 716 0.0 1160
Msa0376060 MtrunA17_Chr7g0275581 65.035 715 239 7 7 713 7 718 0.0 918
Msa0376060 MtrunA17_Chr8g0347121 58.322 751 242 12 1 708 1 723 0.0 829
Msa0376060 MtrunA17_Chr4g0073941 57.856 681 274 7 38 712 56 729 0.0 790
Msa0376060 MtrunA17_Chr2g0326871 50.683 732 311 11 1 711 1 703 0.0 715
Msa0376060 MtrunA17_Chr2g0305771 54.021 659 267 7 78 711 40 687 0.0 709
Msa0376060 MtrunA17_Chr3g0139071 49.799 745 321 14 1 713 1 724 0.0 703
Msa0376060 MtrunA17_Chr4g0001481 51.304 690 312 6 37 710 57 738 0.0 697
Msa0376060 MtrunA17_Chr4g0028861 57.093 578 237 5 70 638 106 681 0.0 684
Msa0376060 MtrunA17_Chr1g0181121 50.875 686 310 11 45 711 4 681 0.0 680
Msa0376060 MtrunA17_Chr7g0228181 50.998 651 293 9 78 712 41 681 0.0 670
Msa0376060 MtrunA17_Chr3g0125651 50.220 683 293 7 62 709 17 687 0.0 659
Msa0376060 MtrunA17_Chr6g0481021 39.968 623 324 17 40 638 94 690 3.15e-133 409
Msa0376060 MtrunA17_Chr6g0480671 40.068 589 318 12 80 648 192 765 1.01e-126 394
Msa0376060 MtrunA17_Chr6g0480851 38.980 608 327 14 55 642 167 750 2.86e-125 390
Msa0376060 MtrunA17_Chr6g0480781 35.948 612 352 16 55 648 152 741 1.33e-121 381
Msa0376060 MtrunA17_Chr8g0360821 36.696 575 329 11 82 634 63 624 2.04e-117 367
Msa0376060 MtrunA17_Chr7g0218341 36.252 571 344 9 79 634 107 672 9.86e-112 353
Msa0376060 MtrunA17_Chr6g0480741 33.795 577 353 10 71 631 105 668 9.26e-98 316
Msa0376060 MtrunA17_Chr6g0480681 32.593 675 363 21 26 639 57 700 3.47e-94 308
Msa0376060 MtrunA17_Chr2g0318561 37.363 455 259 10 197 634 2 447 5.47e-93 298
Msa0376060 MtrunA17_Chr5g0395421 35.977 353 195 9 279 615 18 355 3.88e-53 188
Msa0376060 MtrunA17_Chr2g0326861 45.596 193 103 2 156 346 14 206 3.38e-52 180
Msa0376060 MtrunA17_Chr5g0395411 37.004 227 119 6 55 280 155 358 3.79e-42 157
Msa0376060 MtrunA17_Chr2g0326851 50.000 140 56 3 577 711 3 133 9.10e-35 128
Msa0376060 MtrunA17_Chr6g0480771 35.317 252 140 6 398 636 12 253 1.04e-34 134
Msa0376060 MtrunA17_Chr6g0480841 41.919 198 95 5 452 636 2 192 1.77e-33 128
Msa0376060 MtrunA17_Chr6g0480791 31.928 166 102 4 40 203 139 295 1.12e-22 99.0
Msa0376060 MtrunA17_Chr6g0480751 32.911 158 94 2 41 198 70 215 2.61e-22 96.3
Msa0376060 MtrunA17_Chr2g0318551 31.875 160 93 4 73 228 52 199 5.36e-16 77.8
Msa0376060 MtrunA17_Chr2g0277651 20.290 483 304 15 135 609 108 517 3.66e-15 79.7
Msa0376060 MtrunA17_Chr6g0480821 27.317 205 138 8 184 382 10 209 1.11e-13 70.9
Msa0376060 MtrunA17_Chr4g0063141 25.243 206 149 4 352 555 239 441 2.34e-13 73.9
Msa0376060 MtrunA17_Chr3g0138671 22.059 204 154 3 353 555 243 442 1.72e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376060 AT5G53130.1 78.303 719 146 6 1 712 1 716 0.0 1144
Msa0376060 AT1G01340.2 60.468 726 254 7 1 712 1 707 0.0 892
Msa0376060 AT1G01340.1 65.123 648 210 4 77 712 59 702 0.0 888
Msa0376060 AT4G01010.1 60.918 719 244 8 1 709 1 692 0.0 884
Msa0376060 AT4G01010.2 60.918 719 244 8 1 709 1 692 0.0 884
Msa0376060 AT2G46430.1 58.726 722 270 10 1 712 2 705 0.0 846
Msa0376060 AT2G46430.2 58.726 722 270 10 1 712 2 705 0.0 846
Msa0376060 AT2G23980.9 56.168 689 290 5 37 713 59 747 0.0 801
Msa0376060 AT2G23980.10 56.168 689 290 5 37 713 59 747 0.0 801
Msa0376060 AT2G23980.1 56.168 689 290 5 37 713 59 747 0.0 801
Msa0376060 AT2G23980.4 56.168 689 290 5 37 713 59 747 0.0 801
Msa0376060 AT2G23980.5 56.168 689 290 5 37 713 59 747 0.0 801
Msa0376060 AT2G23980.6 56.168 689 290 5 37 713 32 720 0.0 800
Msa0376060 AT4G30560.1 57.122 681 273 6 40 712 62 731 0.0 799
Msa0376060 AT4G30560.4 57.122 681 273 6 40 712 62 731 0.0 799
Msa0376060 AT4G30560.5 57.122 681 273 6 40 712 36 705 0.0 798
Msa0376060 AT4G30560.2 57.122 681 273 6 40 712 36 705 0.0 798
Msa0376060 AT4G30560.3 57.122 681 273 6 40 712 36 705 0.0 798
Msa0376060 AT2G23980.3 54.494 712 289 6 37 713 59 770 0.0 787
Msa0376060 AT2G23980.2 54.494 712 289 6 37 713 59 770 0.0 787
Msa0376060 AT2G23980.8 54.494 712 289 6 37 713 59 770 0.0 787
Msa0376060 AT2G23980.7 54.494 712 289 6 37 713 59 770 0.0 787
Msa0376060 AT5G57940.1 54.345 725 309 7 1 711 1 717 0.0 783
Msa0376060 AT5G57940.2 54.345 725 309 7 1 711 1 717 0.0 783
Msa0376060 AT5G57940.3 54.132 726 302 8 1 711 1 710 0.0 781
Msa0376060 AT1G19780.1 51.673 747 311 9 4 710 10 746 0.0 766
Msa0376060 AT1G15990.1 52.503 739 310 11 4 711 10 738 0.0 756
Msa0376060 AT2G28260.1 51.034 725 294 10 1 711 1 678 0.0 712
Msa0376060 AT2G28260.2 54.160 661 260 7 65 711 7 638 0.0 709
Msa0376060 AT2G24610.1 52.985 670 268 10 78 712 69 726 0.0 698
Msa0376060 AT2G24610.2 52.985 670 268 10 78 712 84 741 0.0 697
Msa0376060 AT4G30360.1 51.976 658 280 9 81 712 71 718 0.0 681
Msa0376060 AT3G48010.1 50.374 669 289 8 78 708 41 704 0.0 674
Msa0376060 AT5G14870.1 48.741 675 300 8 78 713 37 704 0.0 659
Msa0376060 AT2G46440.1 55.405 592 247 8 89 670 37 621 0.0 640
Msa0376060 AT2G46450.4 49.289 633 291 10 89 712 37 648 0.0 598
Msa0376060 AT2G46450.1 49.289 633 291 10 89 712 37 648 0.0 598
Msa0376060 AT1G19780.2 54.797 542 209 7 197 710 2 535 0.0 596
Msa0376060 AT2G46450.3 47.551 633 279 11 89 712 24 612 0.0 563
Msa0376060 AT2G46450.2 47.551 633 279 11 89 712 37 625 0.0 562
Msa0376060 AT2G46440.2 59.101 445 168 7 236 670 3 443 3.80e-176 511
Msa0376060 AT3G17690.1 37.375 602 339 15 56 640 138 718 1.40e-123 385
Msa0376060 AT3G17700.1 38.584 565 322 10 81 631 192 745 4.95e-119 374
Msa0376060 AT5G15410.1 35.839 572 343 9 79 631 111 677 6.89e-112 355
Msa0376060 AT5G15410.2 35.839 572 343 9 79 631 110 676 7.79e-112 355
Msa0376060 AT5G54250.2 34.459 592 358 10 68 634 59 645 7.02e-111 351
Msa0376060 AT5G54250.1 34.459 592 358 10 68 634 59 645 7.02e-111 351
Msa0376060 AT5G54250.4 34.459 592 358 10 68 634 59 645 7.02e-111 351
Msa0376060 AT3G17690.2 37.524 517 295 11 54 562 136 632 4.43e-110 347
Msa0376060 AT3G17700.2 38.900 491 287 7 81 569 192 671 1.66e-107 342
Msa0376060 AT5G54250.3 33.953 592 356 11 68 634 59 640 5.50e-106 338
Msa0376060 AT3G17690.3 35.878 393 227 10 55 439 141 516 1.26e-73 248

Find 184 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATGATGTTTAGATTTC+AGG 0.178608 3_1:+76079482 Msa0376060:intron
CATTTGTTCTAGTACCATTT+TGG 0.181352 3_1:-76086808 None:intergenic
TTTACTTCTTCATAGGTTCT+TGG 0.239651 3_1:+76081577 Msa0376060:intron
CATAGGTTCTTGGTGCCTTT+TGG 0.239954 3_1:+76081587 Msa0376060:intron
CTTCCACTTCTGAAAGAGTT+TGG 0.261316 3_1:-76086093 None:intergenic
TCATCCATCTTCTCAAATAT+TGG 0.272792 3_1:-76085809 None:intergenic
TTTCATTTCCATTGCTGGTT+TGG 0.276243 3_1:+76083725 Msa0376060:CDS
GCTCCCTCTTCTCGAGTATT+TGG 0.281314 3_1:+76079939 Msa0376060:CDS
AATCTGGTTCGGTAGGCTTC+TGG 0.288039 3_1:-76086462 None:intergenic
TTCACTTATTTCTCATGAAT+TGG 0.291218 3_1:+76078823 Msa0376060:five_prime_UTR
CTGCGTAATGTGAATTATTC+CGG 0.292496 3_1:-76079529 None:intergenic
CCCGAATTTCTTCCCTTGTA+TGG 0.311997 3_1:-76086848 None:intergenic
AGAAGCTCGAAGAGTCTCTA+AGG 0.322669 3_1:+76086272 Msa0376060:CDS
TTCCTTGATGCCCTTCAATC+TGG 0.329443 3_1:+76081790 Msa0376060:CDS
TGGCAACAAGTACCTTTGTT+TGG 0.341740 3_1:+76083685 Msa0376060:CDS
TTAAATCCTTGGGAAGATTA+CGG 0.342810 3_1:-76084982 None:intergenic
ACCATACAAGGGAAGAAATT+CGG 0.344726 3_1:+76086847 Msa0376060:three_prime_UTR
AATGTCCCTTCTTAAATCCT+TGG 0.349785 3_1:-76084993 None:intergenic
GAAGATGGATGAGCAACTTT+TGG 0.350421 3_1:+76085820 Msa0376060:CDS
TAAAAGTGATAAACTGATAA+AGG 0.353598 3_1:-76086874 None:intergenic
ATTCTTTCTCTCAAGTGGTC+AGG 0.356933 3_1:-76084899 None:intergenic
AGTTTGTTGCATCTCAATTT+CGG 0.361126 3_1:+76086143 Msa0376060:CDS
GGCAACAAGTACCTTTGTTT+GGG 0.366892 3_1:+76083686 Msa0376060:CDS
ATCTAGTTCTGAGAGGATAA+AGG 0.372558 3_1:+76079611 Msa0376060:CDS
GTATTGGGCATGAAGCATTC+AGG 0.376090 3_1:-76081732 None:intergenic
TGCTCTTCAGCAGTAAAATC+TGG 0.380553 3_1:-76086478 None:intergenic
AGGTAGTCTCTCTGGCACCC+TGG 0.388492 3_1:-76086428 None:intergenic
GTATTATTTGCATTCCTCAT+TGG 0.391249 3_1:+76083747 Msa0376060:CDS
GGCAATAGCAAAGAGATATA+TGG 0.392870 3_1:+76079989 Msa0376060:CDS
AAGCAAACCTCAAATTCTTT+AGG 0.394576 3_1:-76081867 None:intergenic
CCATACAAGGGAAGAAATTC+GGG 0.400979 3_1:+76086848 Msa0376060:three_prime_UTR
ACAACAAACGGTGGAAGAAC+GGG 0.404405 3_1:+76085959 Msa0376060:CDS
CTTCCTTGGCCAATGCATCT+TGG 0.404702 3_1:-76086312 None:intergenic
GTATAAACCGTGGCACATAT+TGG 0.407900 3_1:-76080373 None:intergenic
TTCATCAAGATAAATTTGTT+AGG 0.409438 3_1:+76079098 Msa0376060:CDS
ACTCGCAACAATGGCGTACA+TGG 0.414933 3_1:+76086206 Msa0376060:CDS
ATAATTCACATTACGCAGTC+AGG 0.418467 3_1:+76079534 Msa0376060:CDS
GCCCTTCAATCTGGAGTTGT+GGG 0.423331 3_1:+76081799 Msa0376060:CDS
TGGAGGAGATGAGAGTGAAA+AGG 0.424516 3_1:+76084840 Msa0376060:CDS
GGTAGTCTCTCTGGCACCCT+GGG 0.425998 3_1:-76086427 None:intergenic
ATGTCCCTTCTTAAATCCTT+GGG 0.426279 3_1:-76084992 None:intergenic
ATCTGGAGTTGTGGGGTCAA+TGG 0.428895 3_1:+76081807 Msa0376060:CDS
ACAGTCAACAACTACAAGAT+TGG 0.430528 3_1:+76084820 Msa0376060:CDS
GGTGCCAATATTTGAGAAGA+TGG 0.434132 3_1:+76085805 Msa0376060:intron
CTTGTAACCTCTTTATATAG+TGG 0.439424 3_1:-76080404 None:intergenic
CTTTCTTTCGTGTAAAGTAC+TGG 0.440645 3_1:-76085866 None:intergenic
AATTAGAATGAAATTATGAT+AGG 0.441711 3_1:+76086573 Msa0376060:three_prime_UTR
ATGAAGAGCATCTCATCAAC+AGG 0.441941 3_1:-76085911 None:intergenic
ATGAATAACGGTACCATACA+AGG 0.446565 3_1:+76086835 Msa0376060:three_prime_UTR
AAATAACAAAACTGACATCT+TGG 0.448095 3_1:-76086600 None:intergenic
GTGCCACAATATATGCTTCA+AGG 0.449161 3_1:+76086356 Msa0376060:CDS
TCTAGTTCTGAGAGGATAAA+GGG 0.450631 3_1:+76079612 Msa0376060:CDS
CAGTTCTCTTGGTCAGAACC+TGG 0.452079 3_1:+76083665 Msa0376060:intron
TGCGTAATGTGAATTATTCC+GGG 0.455347 3_1:-76079528 None:intergenic
GGTGGGGCCTAAAGAATTTG+AGG 0.456770 3_1:+76081860 Msa0376060:CDS
TGAAAGAGTTTGGACAGTCC+TGG 0.457546 3_1:-76086083 None:intergenic
GTCTGATTCTTTCTCTCAAG+TGG 0.459265 3_1:-76084904 None:intergenic
AAGAATTGAAGTGGAAGAGA+AGG 0.464008 3_1:-76078749 None:intergenic
AGTTTCAAGCAAGTTTCAAA+GGG 0.465299 3_1:+76079581 Msa0376060:CDS
CAGTTTCAAGCAAGTTTCAA+AGG 0.465351 3_1:+76079580 Msa0376060:CDS
GATTCAGAGCCTGTCATCTT+CGG 0.465499 3_1:-76080311 None:intergenic
TGCCGTTCTTCCCCTCCCAC+AGG 0.466202 3_1:+76080037 Msa0376060:CDS
CTGCTTGGCTTTGCTGATGA+GGG 0.473481 3_1:+76085027 Msa0376060:CDS
TTCTTTCTCTCAAGTGGTCA+GGG 0.474389 3_1:-76084898 None:intergenic
CTCTAAGGGAAGAGGAGAAT+AGG 0.475787 3_1:+76086287 Msa0376060:CDS
AAATAAAATTCTTGATCCGC+AGG 0.476532 3_1:+76079701 Msa0376060:CDS
TATATCCCTGTGATTGATGA+TGG 0.477487 3_1:+76079801 Msa0376060:CDS
TTGGACAGTCCTGGTTGAGA+TGG 0.479012 3_1:-76086074 None:intergenic
ATCATGGGAGGTAGTCTCTC+TGG 0.479793 3_1:-76086436 None:intergenic
TTCTTGCCATCATCAATCAC+AGG 0.485569 3_1:-76079807 None:intergenic
TGATGTTTAGATTTCAGGAC+TGG 0.486115 3_1:+76079487 Msa0376060:intron
CTCACTGAAACAGCATGGGC+TGG 0.490891 3_1:+76080440 Msa0376060:CDS
TCTTCCACCGTTTGTTGTCA+CGG 0.491871 3_1:-76085954 None:intergenic
TCTGCTTGGCTTTGCTGATG+AGG 0.497625 3_1:+76085026 Msa0376060:CDS
TTGTTGACCGTGACAACAAA+CGG 0.498587 3_1:+76085947 Msa0376060:CDS
ATCTTCCCAAGGATTTAAGA+AGG 0.498930 3_1:+76084987 Msa0376060:CDS
TGTGTTGGTTCAAGATGCTT+GGG 0.500321 3_1:+76079968 Msa0376060:CDS
ATTCCTCATTGGAAATATGC+AGG 0.500965 3_1:+76083758 Msa0376060:CDS
CGAAGAGTCTCTAAGGGAAG+AGG 0.502897 3_1:+76086279 Msa0376060:CDS
TTTATCATTCCGAAGATGAC+AGG 0.506619 3_1:+76080302 Msa0376060:CDS
CTCCAGATTGAAGGGCATCA+AGG 0.507823 3_1:-76081792 None:intergenic
CACTATATAAAGAGGTTACA+AGG 0.511458 3_1:+76080405 Msa0376060:CDS
AAACAAAGGTACTTGTTGCC+AGG 0.512386 3_1:-76083683 None:intergenic
TCTTCTCGAGTATTTGGAAG+AGG 0.512473 3_1:+76079945 Msa0376060:CDS
GTGTGTTGGTTCAAGATGCT+TGG 0.512801 3_1:+76079967 Msa0376060:CDS
GAGAAACCACATGCTGGCAA+AGG 0.516634 3_1:+76081629 Msa0376060:CDS
TTCAGCAGTAAAATCTGGTT+CGG 0.516650 3_1:-76086473 None:intergenic
GACAACAAACGGTGGAAGAA+CGG 0.517367 3_1:+76085958 Msa0376060:CDS
AAGAGCAATAGTGTAATCAA+TGG 0.518572 3_1:+76086494 Msa0376060:exon
TGGACAGTCCTGGTTGAGAT+GGG 0.519210 3_1:-76086073 None:intergenic
TGCCCTTCAATCTGGAGTTG+TGG 0.519473 3_1:+76081798 Msa0376060:CDS
AAAGAGGTTACAAGGACCTC+TGG 0.523467 3_1:+76080413 Msa0376060:CDS
ACCCCACAACTCCAGATTGA+AGG 0.526110 3_1:-76081801 None:intergenic
AGGTGAACTACCACCTTCCT+TGG 0.526375 3_1:-76086326 None:intergenic
TATAGAAAACAAATACCAAA+AGG 0.526421 3_1:-76081602 None:intergenic
GTAGGCTTCTGGAGCATCAT+GGG 0.527145 3_1:-76086451 None:intergenic
CTGTAAGAAAAGAAAAGAAA+TGG 0.527777 3_1:+76086533 Msa0376060:three_prime_UTR
GGTAGGCTTCTGGAGCATCA+TGG 0.527893 3_1:-76086452 None:intergenic
CATTAAGCGTCATCTCTGCT+TGG 0.528466 3_1:+76085012 Msa0376060:CDS
GCAGTAAAATCTGGTTCGGT+AGG 0.529158 3_1:-76086469 None:intergenic
AATAGCTCCACTATATAAAG+AGG 0.531901 3_1:+76080397 Msa0376060:CDS
ATGGCAAGAAATGTCTTTCA+CGG 0.534720 3_1:+76079820 Msa0376060:CDS
AGAAACCACATGCTGGCAAA+GGG 0.535280 3_1:+76081630 Msa0376060:CDS
TCATACAAGCAGCGTGGAGG+CGG 0.537327 3_1:+76086239 Msa0376060:CDS
GAAGTGGAAGAGAAGGTTCG+TGG 0.537972 3_1:-76078742 None:intergenic
AACAAATGTCAAATGAATAA+CGG 0.538196 3_1:+76086823 Msa0376060:three_prime_UTR
AAAATGGCTCAAGGAAGCCC+AGG 0.538256 3_1:+76086410 Msa0376060:CDS
GAATAGGCTCCAAGATGCAT+TGG 0.545962 3_1:+76086303 Msa0376060:CDS
ACAAGCCCTTTGCCAGCATG+TGG 0.545968 3_1:-76081635 None:intergenic
CCCCACAACTCCAGATTGAA+GGG 0.546523 3_1:-76081800 None:intergenic
AACTCTGAATACCTCAAGGC+CGG 0.549969 3_1:+76085989 Msa0376060:CDS
TTGTATTGTGATGATCATCA+TGG 0.551055 3_1:+76081688 Msa0376060:CDS
AGTTCAGAGGTTAACTCTCC+CGG 0.551091 3_1:+76079510 Msa0376060:CDS
TACCTGTGGGAGGGGAAGAA+CGG 0.553125 3_1:-76080039 None:intergenic
TGGAAGAGAAGGTTCGTGGA+AGG 0.554690 3_1:-76078738 None:intergenic
GACGACATGAGCAATACAAA+TGG 0.558039 3_1:+76084924 Msa0376060:CDS
TCGCACTTTGTGATGGCCGA+TGG 0.558752 3_1:+76086769 Msa0376060:three_prime_UTR
TGAAGGAAGAAGAATTGAAG+TGG 0.561658 3_1:-76078758 None:intergenic
CCTGGTTGAGATGGGAAGGT+TGG 0.564304 3_1:-76086065 None:intergenic
AGTATTTGGAAGAGGTGTGT+TGG 0.566289 3_1:+76079953 Msa0376060:CDS
CACAGAAGTCACCGGCCTTG+AGG 0.566343 3_1:-76086000 None:intergenic
CAAACAGATATTGTAACCCT+AGG 0.568796 3_1:+76087054 Msa0376060:three_prime_UTR
AAATAATACCAAACCAGCAA+TGG 0.572488 3_1:-76083733 None:intergenic
GAAGCTCGAAGAGTCTCTAA+GGG 0.574043 3_1:+76086273 Msa0376060:CDS
TAGAAAGAGAAACCACATGC+TGG 0.575276 3_1:+76081623 Msa0376060:CDS
TGTCCAAACTCTTTCAGAAG+TGG 0.576589 3_1:+76086090 Msa0376060:CDS
GCATTCTCACTGAAACAGCA+TGG 0.577149 3_1:+76080435 Msa0376060:CDS
CAATTCTGCCTTTATACACG+TGG 0.578979 3_1:-76081668 None:intergenic
AATAAAATTCTTGATCCGCA+GGG 0.579622 3_1:+76079702 Msa0376060:CDS
CAAGATGCATTGGCCAAGGA+AGG 0.579827 3_1:+76086313 Msa0376060:CDS
TATATTGTGGCACCTAGGCT+AGG 0.582126 3_1:-76086346 None:intergenic
GTCAACAACTACAAGATTGG+AGG 0.582200 3_1:+76084823 Msa0376060:CDS
GTGGAGAGGAGCTTCTCACA+TGG 0.586230 3_1:+76086020 Msa0376060:CDS
TTTGATCCGTAATCTTCCCA+AGG 0.586467 3_1:+76084976 Msa0376060:CDS
CCAACCTTCCCATCTCAACC+AGG 0.588199 3_1:+76086065 Msa0376060:CDS
AAAGAAGATTTCCCAAACAA+AGG 0.591284 3_1:-76083697 None:intergenic
CATTCTCACTGAAACAGCAT+GGG 0.591494 3_1:+76080436 Msa0376060:CDS
AATAGTGTAATCAATGGAGA+TGG 0.592879 3_1:+76086500 Msa0376060:exon
TATTCTTCCAATATGTGCCA+CGG 0.593988 3_1:+76080366 Msa0376060:CDS
GAAATAAGTGAAGTAATGAA+AGG 0.596085 3_1:-76078812 None:intergenic
TCTTCCCAAGGATTTAAGAA+GGG 0.597363 3_1:+76084988 Msa0376060:CDS
TGGCAAGAAATGTCTTTCAC+GGG 0.597393 3_1:+76079821 Msa0376060:CDS
CAGTCCTGGTTGAGATGGGA+AGG 0.601072 3_1:-76086069 None:intergenic
AGATTTATTATTACAAGACA+CGG 0.601642 3_1:+76079027 Msa0376060:five_prime_UTR
CTCAAGGCCGGTGACTTCTG+TGG 0.604437 3_1:+76086001 Msa0376060:CDS
GCTCCAAGATGCATTGGCCA+AGG 0.607396 3_1:+76086309 Msa0376060:CDS
GAAAGCTGCATTGTTCGCGA+AGG 0.608012 3_1:+76085884 Msa0376060:CDS
CTTCAACTCTGAATACCTCA+AGG 0.608292 3_1:+76085985 Msa0376060:CDS
GATGCATTGGCCAAGGAAGG+TGG 0.608847 3_1:+76086316 Msa0376060:CDS
GGTGGTAGTTCACCTAGCCT+AGG 0.609619 3_1:+76086334 Msa0376060:CDS
AGCATTTGCTCTAAAAGCTG+AGG 0.610634 3_1:+76086114 Msa0376060:CDS
ATTTCAGGACTGGAGTTCAG+AGG 0.612334 3_1:+76079497 Msa0376060:CDS
TCTTCCAAATACTCGAGAAG+AGG 0.612374 3_1:-76079943 None:intergenic
CTCGCAACAATGGCGTACAT+GGG 0.613114 3_1:+76086207 Msa0376060:CDS
ATAGATAGGATTGATGATGA+TGG 0.613942 3_1:-76078781 None:intergenic
GGCCGGTGACTTCTGTGGAG+AGG 0.614698 3_1:+76086006 Msa0376060:CDS
TAATTCACATTACGCAGTCA+GGG 0.616021 3_1:+76079535 Msa0376060:CDS
CCCTTCAATCTGGAGTTGTG+GGG 0.616232 3_1:+76081800 Msa0376060:CDS
TGGAGAGGAGCTTCTCACAT+GGG 0.618857 3_1:+76086021 Msa0376060:CDS
CTTCCAAATACTCGAGAAGA+GGG 0.620229 3_1:-76079942 None:intergenic
AAGCATATATTGTGGCACCT+AGG 0.625095 3_1:-76086351 None:intergenic
AGGATTGATGATGATGGTGA+AGG 0.625310 3_1:-76078775 None:intergenic
AAACCTTGAAGCATATATTG+TGG 0.626481 3_1:-76086359 None:intergenic
GTCGAAGCTGCTTACTGTGA+AGG 0.630397 3_1:-76086168 None:intergenic
AAAGGAGAGACGCAGAACAG+TGG 0.631752 3_1:+76084858 Msa0376060:CDS
CTCCTCTCCACAGAAGTCAC+CGG 0.635029 3_1:-76086008 None:intergenic
TCTTGCCATCATCAATCACA+GGG 0.639070 3_1:-76079806 None:intergenic
CAACCTGCATATTTCCAATG+AGG 0.643448 3_1:-76083761 None:intergenic
GGCTTCTGGAGCATCATGGG+AGG 0.643524 3_1:-76086448 None:intergenic
ACAGGGATATAAAAGAACAA+AGG 0.648329 3_1:-76079789 None:intergenic
GGAAGGTTGGATGCAGAACG+AGG 0.662339 3_1:-76086052 None:intergenic
TACAAATGGCAAGAAACTAG+AGG 0.662743 3_1:+76084938 Msa0376060:CDS
GTTTCAAGCAAGTTTCAAAG+GGG 0.669979 3_1:+76079582 Msa0376060:CDS
GTTTCATACAAGCAGCGTGG+AGG 0.671667 3_1:+76086236 Msa0376060:CDS
TATTTACAGAGAGATAGCGA+CGG 0.673370 3_1:-76078709 None:intergenic
ACTCGTGAATGAAACTGGTG+CGG 0.677451 3_1:+76086721 Msa0376060:three_prime_UTR
TGAATAACGGTACCATACAA+GGG 0.682148 3_1:+76086836 Msa0376060:three_prime_UTR
GAGATGCTCTTCATAATGCG+CGG 0.685033 3_1:+76085920 Msa0376060:CDS
AAATGGCTCAAGGAAGCCCA+GGG 0.688785 3_1:+76086411 Msa0376060:CDS
CATGTTTCATACAAGCAGCG+TGG 0.689166 3_1:+76086233 Msa0376060:CDS
TGTTTCAGTGAGAATGCCAG+AGG 0.703747 3_1:-76080429 None:intergenic
GATTCGAATCTAGTTCTGAG+AGG 0.710513 3_1:+76079604 Msa0376060:CDS
GGAGCTATTCGTATAAACCG+TGG 0.728285 3_1:-76080383 None:intergenic
TTGACCGTGACAACAAACGG+TGG 0.747129 3_1:+76085950 Msa0376060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTATTTTTAAATA+TGG + chr3_1:76080633-76080652 Msa0376060:intron 0.0%
!! ATAAAAATTAAATGAGAAAA+AGG - chr3_1:76078914-76078933 None:intergenic 10.0%
!!! TAAATAATTAAATTTAAGGT+AGG - chr3_1:76079141-76079160 None:intergenic 10.0%
!! CTTGTAAATAATTAAATTTA+AGG - chr3_1:76079145-76079164 None:intergenic 10.0%
!! ATGAATAATATAAAAAATGT+CGG - chr3_1:76079889-76079908 None:intergenic 10.0%
!!! AGAAATTTTTTTATTGTTTT+TGG + chr3_1:76081839-76081858 Msa0376060:CDS 10.0%
!!! TTTTTATGTATATTGTAATT+AGG - chr3_1:76082392-76082411 None:intergenic 10.0%
!! AAAAATATGGAAAATAAATA+AGG + chr3_1:76082850-76082869 Msa0376060:intron 10.0%
!! AAAATATGGAAAATAAATAA+GGG + chr3_1:76082851-76082870 Msa0376060:intron 10.0%
!! AAAGAAATAATTAATGTATT+TGG + chr3_1:76082883-76082902 Msa0376060:intron 10.0%
!! AAAGAGTTATTAATATTATA+TGG - chr3_1:76085759-76085778 None:intergenic 10.0%
!!! TAAAAACTAGTTTTTTTTTT+TGG + chr3_1:76087098-76087117 Msa0376060:three_prime_UTR 10.0%
!! GTTAAAAAATTAATCTACAA+GGG + chr3_1:76080986-76081005 Msa0376060:intron 15.0%
!! TTAAAAAATTAATCTACAAG+GGG + chr3_1:76080987-76081006 Msa0376060:intron 15.0%
!! AAAAAATACAACAATTATGA+AGG - chr3_1:76081443-76081462 None:intergenic 15.0%
!! AACAATAAAAAAATTTCTGT+GGG - chr3_1:76081837-76081856 None:intergenic 15.0%
!! AAACAATAAAAAAATTTCTG+TGG - chr3_1:76081838-76081857 None:intergenic 15.0%
!!! AATTTTTTTATTGTTTTTGG+TGG + chr3_1:76081842-76081861 Msa0376060:CDS 15.0%
!!! ATTTTTTTATTGTTTTTGGT+GGG + chr3_1:76081843-76081862 Msa0376060:CDS 15.0%
!! TCTTTATTAATATATGCTAT+TGG + chr3_1:76081897-76081916 Msa0376060:intron 15.0%
!! AGAAAATTATGATAATAATG+TGG + chr3_1:76082282-76082301 Msa0376060:intron 15.0%
!! ATAAAAATTCTTAGAATTTG+GGG - chr3_1:76083351-76083370 None:intergenic 15.0%
!! CATAAAAATTCTTAGAATTT+GGG - chr3_1:76083352-76083371 None:intergenic 15.0%
!! TTAACAAAAAAAAAAAACCT+GGG - chr3_1:76083458-76083477 None:intergenic 15.0%
!! TTTAACAAAAAAAAAAAACC+TGG - chr3_1:76083459-76083478 None:intergenic 15.0%
!! AACATTTAAAAAATACTATG+GGG - chr3_1:76083564-76083583 None:intergenic 15.0%
!! CAACATTTAAAAAATACTAT+GGG - chr3_1:76083565-76083584 None:intergenic 15.0%
!! TCAACATTTAAAAAATACTA+TGG - chr3_1:76083566-76083585 None:intergenic 15.0%
!!! AATAATAGAGTCTTATATTT+TGG + chr3_1:76084437-76084456 Msa0376060:intron 15.0%
!!! ATAATAGAGTCTTATATTTT+GGG + chr3_1:76084438-76084457 Msa0376060:intron 15.0%
!! GGAAAAAATAGAAATATTTA+TGG - chr3_1:76084646-76084665 None:intergenic 15.0%
!! GATTGTATTTAAAAGATAAT+AGG - chr3_1:76084667-76084686 None:intergenic 15.0%
!! AATGTCAATGTAAATAAATA+AGG - chr3_1:76084695-76084714 None:intergenic 15.0%
!!! TTTTAAACTTGTTTTAATAC+AGG + chr3_1:76085073-76085092 Msa0376060:intron 15.0%
!!! AATGTAATTTTCTATTTTGA+GGG - chr3_1:76085230-76085249 None:intergenic 15.0%
!! AGCATTTAATAGAATATATT+AGG + chr3_1:76085287-76085306 Msa0376060:intron 15.0%
!! AATTAGAATGAAATTATGAT+AGG + chr3_1:76086573-76086592 Msa0376060:three_prime_UTR 15.0%
!! AGGAATGAAATAAAAATCAA+CGG - chr3_1:76078894-76078913 None:intergenic 20.0%
!! AGATTTATTATTACAAGACA+CGG + chr3_1:76079027-76079046 Msa0376060:five_prime_UTR 20.0%
!!! TTCATCAAGATAAATTTGTT+AGG + chr3_1:76079098-76079117 Msa0376060:CDS 20.0%
!!! AGTATTTTAGTTATTGTCAA+TGG + chr3_1:76079163-76079182 Msa0376060:intron 20.0%
!! TTATATGATGTTTAGATTTC+AGG + chr3_1:76079482-76079501 Msa0376060:intron 20.0%
!! CTTTGTGAAAAAGATTTAAA+AGG - chr3_1:76079651-76079670 None:intergenic 20.0%
!!! ATAATTTTTCAATTTCGTAC+TGG + chr3_1:76079909-76079928 Msa0376060:CDS 20.0%
!! TGCAATAACTAACTAAATTA+AGG - chr3_1:76080081-76080100 None:intergenic 20.0%
!! ATTCATCATGTAATGTAAAT+AGG + chr3_1:76080137-76080156 Msa0376060:intron 20.0%
!!! TTTTTTATTTCCGAATTCAT+TGG + chr3_1:76080592-76080611 Msa0376060:intron 20.0%
!! GGTTAAAAAATTAATCTACA+AGG + chr3_1:76080985-76081004 Msa0376060:intron 20.0%
!! ATGAATTATATGATAACCTT+TGG + chr3_1:76081020-76081039 Msa0376060:intron 20.0%
!! AAATTCTACAAAGTTATAAG+AGG + chr3_1:76081044-76081063 Msa0376060:intron 20.0%
!! AAATCAGAAATTAGAAAGAT+AGG - chr3_1:76081560-76081579 None:intergenic 20.0%
!! TATAGAAAACAAATACCAAA+AGG - chr3_1:76081605-76081624 None:intergenic 20.0%
!!! TTTTTTTATTGTTTTTGGTG+GGG + chr3_1:76081844-76081863 Msa0376060:CDS 20.0%
!!! TTGTTGATTGAAGAAAAATA+TGG + chr3_1:76082837-76082856 Msa0376060:intron 20.0%
!! ATGTATTTGGAAATAACAAA+AGG + chr3_1:76082896-76082915 Msa0376060:intron 20.0%
!! TGTATTTGGAAATAACAAAA+GGG + chr3_1:76082897-76082916 Msa0376060:intron 20.0%
!!! TCAAAAGAGTCTTATAATTA+GGG + chr3_1:76082947-76082966 Msa0376060:intron 20.0%
!! TCAAAGATAGATCTAATATT+GGG + chr3_1:76082992-76083011 Msa0376060:intron 20.0%
!! TTGGAAAATTATGTTAATTG+TGG + chr3_1:76083065-76083084 Msa0376060:intron 20.0%
!! CCATAAAAATTCTTAGAATT+TGG - chr3_1:76083353-76083372 None:intergenic 20.0%
!!! CCAAATTCTAAGAATTTTTA+TGG + chr3_1:76083350-76083369 Msa0376060:intron 20.0%
!!! ACTTTTCTTTCTATGTTAAT+GGG - chr3_1:76083391-76083410 None:intergenic 20.0%
!!! TACTTTTCTTTCTATGTTAA+TGG - chr3_1:76083392-76083411 None:intergenic 20.0%
!! TTAACATAGAAAGAAAAGTA+AGG + chr3_1:76083392-76083411 Msa0376060:intron 20.0%
!! ACATTTAAAAAATACTATGG+GGG - chr3_1:76083563-76083582 None:intergenic 20.0%
!!! TTGTTGATTTTGGAATAAAT+TGG + chr3_1:76083846-76083865 Msa0376060:intron 20.0%
!!! ATTTAATTTGATTTTCCCTT+TGG + chr3_1:76084043-76084062 Msa0376060:intron 20.0%
!!! TTTAATTTGATTTTCCCTTT+GGG + chr3_1:76084044-76084063 Msa0376060:intron 20.0%
!!! TTTTTGTAATTCTCTATGTA+TGG + chr3_1:76084572-76084591 Msa0376060:intron 20.0%
!!! TTTTGTAATTCTCTATGTAT+GGG + chr3_1:76084573-76084592 Msa0376060:intron 20.0%
!! AATAGAAATATTTATGGAAG+TGG - chr3_1:76084640-76084659 None:intergenic 20.0%
!! AATGTAAATAAATAAGGAAC+AGG - chr3_1:76084689-76084708 None:intergenic 20.0%
!! TTAAAACAAGTTTAAAAGAC+AGG - chr3_1:76085070-76085089 None:intergenic 20.0%
!!! GAATGTAATTTTCTATTTTG+AGG - chr3_1:76085231-76085250 None:intergenic 20.0%
!! AATATAGATACACTAAAACA+GGG - chr3_1:76085253-76085272 None:intergenic 20.0%
!! AAATATAGATACACTAAAAC+AGG - chr3_1:76085254-76085273 None:intergenic 20.0%
!!! TAGTGTATCTATATTTTGTT+TGG + chr3_1:76085258-76085277 Msa0376060:intron 20.0%
!!! ATGATATTTTTAGTCCAAAA+TGG + chr3_1:76086794-76086813 Msa0376060:three_prime_UTR 20.0%
!! AACAAATGTCAAATGAATAA+CGG + chr3_1:76086823-76086842 Msa0376060:three_prime_UTR 20.0%
!! TAAAAGTGATAAACTGATAA+AGG - chr3_1:76086877-76086896 None:intergenic 20.0%
!!! TAGTGTCCTAATTTTTTTTT+TGG + chr3_1:76087121-76087140 Msa0376060:three_prime_UTR 20.0%
!! ACACTACCAAAAAAAAAATT+AGG - chr3_1:76087130-76087149 None:intergenic 20.0%
! GAAATAAGTGAAGTAATGAA+AGG - chr3_1:76078815-76078834 None:intergenic 25.0%
!! TTCACTTATTTCTCATGAAT+TGG + chr3_1:76078823-76078842 Msa0376060:five_prime_UTR 25.0%
! TAAAGTTTGACAAAGTCAAT+GGG - chr3_1:76079208-76079227 None:intergenic 25.0%
! ATAAAGTTTGACAAAGTCAA+TGG - chr3_1:76079209-76079228 None:intergenic 25.0%
!!! TTGTTCCATTTTTGAAGAAA+AGG - chr3_1:76079729-76079748 None:intergenic 25.0%
! ACACGTTATGATATTGATAT+TGG - chr3_1:76080111-76080130 None:intergenic 25.0%
! ATATCAATATCATAACGTGT+TGG + chr3_1:76080111-76080130 Msa0376060:intron 25.0%
! AACACTTAGGAAATTAAACA+TGG - chr3_1:76080187-76080206 None:intergenic 25.0%
! ATCTATGCATATAAACACTT+AGG - chr3_1:76080200-76080219 None:intergenic 25.0%
! CTATACTTAGTTACTTACAT+GGG + chr3_1:76080569-76080588 Msa0376060:intron 25.0%
! AGGAAAAATACCAATGAATT+CGG - chr3_1:76080605-76080624 None:intergenic 25.0%
! ATAAGACACTTATAATGAGA+CGG - chr3_1:76080853-76080872 None:intergenic 25.0%
! TGATACAGATAATAGTGTAT+TGG + chr3_1:76080879-76080898 Msa0376060:intron 25.0%
! TTAGTACTTGATACAGATAT+TGG + chr3_1:76080956-76080975 Msa0376060:intron 25.0%
! TGATACAGATATTGGAATAT+TGG + chr3_1:76080964-76080983 Msa0376060:intron 25.0%
! AACTTTGTAGAATTTACCAA+AGG - chr3_1:76081039-76081058 None:intergenic 25.0%
! CTTATTAGGAGATATAATGT+GGG - chr3_1:76081228-76081247 None:intergenic 25.0%
! TCTTATTAGGAGATATAATG+TGG - chr3_1:76081229-76081248 None:intergenic 25.0%
!!! TATATGTTGTTTCACATTCT+CGG + chr3_1:76081373-76081392 Msa0376060:intron 25.0%
! GGATTTAAATATGCTACATT+TGG - chr3_1:76081422-76081441 None:intergenic 25.0%
! TTTCTGATTTACTTCTTCAT+AGG + chr3_1:76081570-76081589 Msa0376060:intron 25.0%
! AAAAAATACCACGTGTATAA+AGG + chr3_1:76081660-76081679 Msa0376060:CDS 25.0%
!! TTTTATCTGGATTCTGTATT+GGG - chr3_1:76081750-76081769 None:intergenic 25.0%
!! TTTTTATCTGGATTCTGTAT+TGG - chr3_1:76081751-76081770 None:intergenic 25.0%
!! AAATCAAAGAGCTTTTTATC+TGG - chr3_1:76081763-76081782 None:intergenic 25.0%
!!! GATAAAAAGCTCTTTGATTT+TGG + chr3_1:76081763-76081782 Msa0376060:CDS 25.0%
!! CAATGTGTTTATGATTTTTG+TGG + chr3_1:76081950-76081969 Msa0376060:intron 25.0%
! TGTATATGTTCATGTTAACA+TGG + chr3_1:76082122-76082141 Msa0376060:intron 25.0%
! GTATATGTTCATGTTAACAT+GGG + chr3_1:76082123-76082142 Msa0376060:intron 25.0%
! AACTTGTGAAGGAAAAAAAA+GGG - chr3_1:76082191-76082210 None:intergenic 25.0%
! GATAATAATGTGGTAGAATT+TGG + chr3_1:76082292-76082311 Msa0376060:intron 25.0%
! TCTTAGCAATAATAAATCCA+AGG + chr3_1:76082342-76082361 Msa0376060:intron 25.0%
! ACGTTATAATTTAGTGTTGT+GGG + chr3_1:76082625-76082644 Msa0376060:intron 25.0%
! CATAAGTCCAAATTATAAGA+TGG + chr3_1:76082660-76082679 Msa0376060:intron 25.0%
! GGTAATACCATCTTATAATT+TGG - chr3_1:76082670-76082689 None:intergenic 25.0%
!! ATTCTCGTGATTTTATCAAA+AGG - chr3_1:76082713-76082732 None:intergenic 25.0%
!! GAAAATAAATAAGGGTATGT+TGG + chr3_1:76082859-76082878 Msa0376060:intron 25.0%
!! AACAAAAGGGTCTTATAAAA+AGG + chr3_1:76082910-76082929 Msa0376060:intron 25.0%
!! ACAAAAGGGTCTTATAAAAA+GGG + chr3_1:76082911-76082930 Msa0376060:intron 25.0%
!! CTCAAAAGAGTCTTATAATT+AGG + chr3_1:76082946-76082965 Msa0376060:intron 25.0%
! GTCAAAGATAGATCTAATAT+TGG + chr3_1:76082991-76083010 Msa0376060:intron 25.0%
! ATAGATATGACTTAAAGTAG+TGG + chr3_1:76083256-76083275 Msa0376060:intron 25.0%
! GTGAGTAAATTACATTCTTT+GGG + chr3_1:76083420-76083439 Msa0376060:intron 25.0%
! TGAGTAAATTACATTCTTTG+GGG + chr3_1:76083421-76083440 Msa0376060:intron 25.0%
!!! GGATTTTAAGTTTCCATATT+TGG - chr3_1:76083494-76083513 None:intergenic 25.0%
! CATTTAAAAAATACTATGGG+GGG - chr3_1:76083562-76083581 None:intergenic 25.0%
! CCAGCAAATATTAACAAAAA+GGG - chr3_1:76083905-76083924 None:intergenic 25.0%
! ACCAGCAAATATTAACAAAA+AGG - chr3_1:76083906-76083925 None:intergenic 25.0%
!! GACATGATCAAAATAAGTTT+TGG - chr3_1:76084022-76084041 None:intergenic 25.0%
!! GAAAAAGGACATCATATTTT+TGG + chr3_1:76084077-76084096 Msa0376060:intron 25.0%
!! TTTTGATATACTTATTGAGC+AGG + chr3_1:76084147-76084166 Msa0376060:intron 25.0%
! TTTGATATACTTATTGAGCA+GGG + chr3_1:76084148-76084167 Msa0376060:intron 25.0%
! AATATTTATGGAAGTGGAAA+AGG - chr3_1:76084634-76084653 None:intergenic 25.0%
! AGAATAACCCAATAATAGAA+TGG - chr3_1:76084747-76084766 None:intergenic 25.0%
! AGTTTAAAAGACAGGAAATA+TGG - chr3_1:76085062-76085081 None:intergenic 25.0%
!!! TGTATCTATATTTTGTTTGG+TGG + chr3_1:76085261-76085280 Msa0376060:intron 25.0%
! GGTGTACGTTTAAAAAAAAA+AGG + chr3_1:76085356-76085375 Msa0376060:intron 25.0%
! TTGCATTCAAATATATGCTA+CGG - chr3_1:76085432-76085451 None:intergenic 25.0%
! CTGTAAGAAAAGAAAAGAAA+TGG + chr3_1:76086533-76086552 Msa0376060:three_prime_UTR 25.0%
! AAATAACAAAACTGACATCT+TGG - chr3_1:76086603-76086622 None:intergenic 25.0%
! ACTAAAAATATCATCACCAT+CGG - chr3_1:76086788-76086807 None:intergenic 25.0%
!!! TCAGTTTATCACTTTTACAT+TGG + chr3_1:76086880-76086899 Msa0376060:three_prime_UTR 25.0%
!! ATAGATAGGATTGATGATGA+TGG - chr3_1:76078784-76078803 None:intergenic 30.0%
! GAAAGGAAAAAAGCATAGAT+AGG - chr3_1:76078798-76078817 None:intergenic 30.0%
AAATGAATGAGAATAATGCG+AGG - chr3_1:76078864-76078883 None:intergenic 30.0%
!! AATCTCTATTGACTTGTTGT+AGG + chr3_1:76078968-76078987 Msa0376060:intron 30.0%
TTGAATGTAATCACATGTGT+CGG - chr3_1:76079300-76079319 None:intergenic 30.0%
AGTTTCAAGCAAGTTTCAAA+GGG + chr3_1:76079581-76079600 Msa0376060:CDS 30.0%
AAATAAAATTCTTGATCCGC+AGG + chr3_1:76079701-76079720 Msa0376060:CDS 30.0%
AATAAAATTCTTGATCCGCA+GGG + chr3_1:76079702-76079721 Msa0376060:CDS 30.0%
ACAGGGATATAAAAGAACAA+AGG - chr3_1:76079792-76079811 None:intergenic 30.0%
GGACAAAAAAATGGAAACTA+CGG + chr3_1:76079842-76079861 Msa0376060:CDS 30.0%
CTTAGGAAATTAAACATGGA+GGG - chr3_1:76080183-76080202 None:intergenic 30.0%
ACTTAGGAAATTAAACATGG+AGG - chr3_1:76080184-76080203 None:intergenic 30.0%
AATAGCTCCACTATATAAAG+AGG + chr3_1:76080397-76080416 Msa0376060:CDS 30.0%
CTTGTAACCTCTTTATATAG+TGG - chr3_1:76080407-76080426 None:intergenic 30.0%
CACTATATAAAGAGGTTACA+AGG + chr3_1:76080405-76080424 Msa0376060:CDS 30.0%
GCTATACTTAGTTACTTACA+TGG + chr3_1:76080568-76080587 Msa0376060:intron 30.0%
TTGAAGCGTATCTAATATTG+CGG + chr3_1:76080664-76080683 Msa0376060:intron 30.0%
ACTTGTTTAATCTAGTGATC+AGG - chr3_1:76080724-76080743 None:intergenic 30.0%
ACCACAAGAGAAAATATATG+TGG - chr3_1:76080759-76080778 None:intergenic 30.0%
CTGTATCAAGTACTAAAATC+AGG - chr3_1:76080952-76080971 None:intergenic 30.0%
TTCTACAAAGTTATAAGAGG+CGG + chr3_1:76081047-76081066 Msa0376060:intron 30.0%
CGCAAACGCTTAAAAATTAA+AGG + chr3_1:76081271-76081290 Msa0376060:intron 30.0%
!! ATATGTTGTTTCACATTCTC+GGG + chr3_1:76081374-76081393 Msa0376060:intron 30.0%
TTTACTTCTTCATAGGTTCT+TGG + chr3_1:76081577-76081596 Msa0376060:intron 30.0%
TTGTATTGTGATGATCATCA+TGG + chr3_1:76081688-76081707 Msa0376060:CDS 30.0%
AAGCAAACCTCAAATTCTTT+AGG - chr3_1:76081870-76081889 None:intergenic 30.0%
TTCACATCAACTTAGTAAAG+TGG - chr3_1:76081976-76081995 None:intergenic 30.0%
! AAAGAAGAGGAAAATGGTTT+TGG + chr3_1:76082022-76082041 Msa0376060:intron 30.0%
TCAACCAGGAATTATATTCT+TGG + chr3_1:76082154-76082173 Msa0376060:intron 30.0%
CAACCAGGAATTATATTCTT+GGG + chr3_1:76082155-76082174 Msa0376060:intron 30.0%
ATTCCCAAGAATATAATTCC+TGG - chr3_1:76082161-76082180 None:intergenic 30.0%
GAACTTGTGAAGGAAAAAAA+AGG - chr3_1:76082192-76082211 None:intergenic 30.0%
TATGTGAATTGAACTTGTGA+AGG - chr3_1:76082202-76082221 None:intergenic 30.0%
AATAATGTGGTAGAATTTGG+TGG + chr3_1:76082295-76082314 Msa0376060:intron 30.0%
TAGCAATAATAAATCCAAGG+AGG + chr3_1:76082345-76082364 Msa0376060:intron 30.0%
AAAGTAACTTCTATTCCTCT+TGG + chr3_1:76082441-76082460 Msa0376060:intron 30.0%
ATCAAAAGTTGACGCAATTA+AGG - chr3_1:76082500-76082519 None:intergenic 30.0%
CACGTTATAATTTAGTGTTG+TGG + chr3_1:76082624-76082643 Msa0376060:intron 30.0%
CGTTATAATTTAGTGTTGTG+GGG + chr3_1:76082626-76082645 Msa0376060:intron 30.0%
TCAAAAGGCTCTTATAATCA+GGG - chr3_1:76082698-76082717 None:intergenic 30.0%
ATCAAAAGGCTCTTATAATC+AGG - chr3_1:76082699-76082718 None:intergenic 30.0%
AAACAAACTCTGTCTCTTAA+AGG - chr3_1:76082796-76082815 None:intergenic 30.0%
! AAGAGTCTTATAATTAGGGA+TGG + chr3_1:76082951-76082970 Msa0376060:intron 30.0%
TAGGAGTTGTAATTAAGGAA+AGG - chr3_1:76083129-76083148 None:intergenic 30.0%
GTCATATCTATAGACAATGT+TGG - chr3_1:76083247-76083266 None:intergenic 30.0%
CGTGAGTAAATTACATTCTT+TGG + chr3_1:76083419-76083438 Msa0376060:intron 30.0%
AGAAACACTTGAACCAAATA+TGG + chr3_1:76083478-76083497 Msa0376060:intron 30.0%
TATGGAAACTTAAAATCCCA+AGG + chr3_1:76083496-76083515 Msa0376060:intron 30.0%
ATGCAAAAATATTCCCAGAA+AGG - chr3_1:76083525-76083544 None:intergenic 30.0%
AAAGAAGATTTCCCAAACAA+AGG - chr3_1:76083700-76083719 None:intergenic 30.0%
AAATAATACCAAACCAGCAA+TGG - chr3_1:76083736-76083755 None:intergenic 30.0%
GTATTATTTGCATTCCTCAT+TGG + chr3_1:76083747-76083766 Msa0376060:CDS 30.0%
AATCAGACAATAATTCAAGC+TGG + chr3_1:76083817-76083836 Msa0376060:intron 30.0%
!!! CTGGTACTATTTGTTGATTT+TGG + chr3_1:76083836-76083855 Msa0376060:intron 30.0%
TCAGGAGGAATATATAATAC+TGG - chr3_1:76083875-76083894 None:intergenic 30.0%
! CCCTTTTTGTTAATATTTGC+TGG + chr3_1:76083902-76083921 Msa0376060:intron 30.0%
!!! CTGGTTTTATGTCTTTCTTT+TGG + chr3_1:76083921-76083940 Msa0376060:intron 30.0%
! AAATATCAGTATGCGCTTTT+AGG + chr3_1:76084256-76084275 Msa0376060:intron 30.0%
!!! GTATGCATTTTTTCCTTAGA+AGG - chr3_1:76084464-76084483 None:intergenic 30.0%
CTTAATAAACACGAATTCAC+TGG - chr3_1:76084552-76084571 None:intergenic 30.0%
TTGAAAAATAGTTTGACACC+CGG + chr3_1:76084720-76084739 Msa0376060:intron 30.0%
!! TATGATGGATCAAATTGTTG+AGG - chr3_1:76084770-76084789 None:intergenic 30.0%
GGAAGAAAAATGAAGTATGA+TGG - chr3_1:76084785-76084804 None:intergenic 30.0%
! GACTGTAAATATGTCTGTTT+TGG - chr3_1:76084806-76084825 None:intergenic 30.0%
TTAAATCCTTGGGAAGATTA+CGG - chr3_1:76084985-76085004 None:intergenic 30.0%
TTATCTATCTGCGATTATAG+TGG + chr3_1:76085157-76085176 Msa0376060:intron 30.0%
!! ATCTATATTTTGTTTGGTGG+TGG + chr3_1:76085264-76085283 Msa0376060:intron 30.0%
TGCACAAACCTAACAAATAT+TGG + chr3_1:76085334-76085353 Msa0376060:intron 30.0%
GCACAAACCTAACAAATATT+GGG + chr3_1:76085335-76085354 Msa0376060:intron 30.0%
GATCAGCACTAATTCAAAAA+AGG - chr3_1:76085514-76085533 None:intergenic 30.0%
ATGGGAATTCAAAATACGAT+TGG + chr3_1:76085662-76085681 Msa0376060:intron 30.0%
TCATCCATCTTCTCAAATAT+TGG - chr3_1:76085812-76085831 None:intergenic 30.0%
!! AGTTTGTTGCATCTCAATTT+CGG + chr3_1:76086143-76086162 Msa0376060:CDS 30.0%
AAACCTTGAAGCATATATTG+TGG - chr3_1:76086362-76086381 None:intergenic 30.0%
AAGAGCAATAGTGTAATCAA+TGG + chr3_1:76086494-76086513 Msa0376060:exon 30.0%
AATAGTGTAATCAATGGAGA+TGG + chr3_1:76086500-76086519 Msa0376060:exon 30.0%
! TTTTCTTTTCTTACAGCACA+AGG - chr3_1:76086529-76086548 None:intergenic 30.0%
! CATTTGTTCTAGTACCATTT+TGG - chr3_1:76086811-76086830 None:intergenic 30.0%
! GTATTGTATTTTGTTGCCTA+GGG - chr3_1:76087073-76087092 None:intergenic 30.0%
! TGTATTGTATTTTGTTGCCT+AGG - chr3_1:76087074-76087093 None:intergenic 30.0%
TATTTACAGAGAGATAGCGA+CGG - chr3_1:76078712-76078731 None:intergenic 35.0%
AAGAATTGAAGTGGAAGAGA+AGG - chr3_1:76078752-76078771 None:intergenic 35.0%
TGAAGGAAGAAGAATTGAAG+TGG - chr3_1:76078761-76078780 None:intergenic 35.0%
! TTTTGACAGGTTCATGAAGA+AGG + chr3_1:76078991-76079010 Msa0376060:five_prime_UTR 35.0%
GTATCAACATTTCTGATCGA+AGG + chr3_1:76079237-76079256 Msa0376060:intron 35.0%
TCAGTCCATGATAAACCATT+CGG - chr3_1:76079444-76079463 None:intergenic 35.0%
TGATGTTTAGATTTCAGGAC+TGG + chr3_1:76079487-76079506 Msa0376060:intron 35.0%
TGCGTAATGTGAATTATTCC+GGG - chr3_1:76079531-76079550 None:intergenic 35.0%
CTGCGTAATGTGAATTATTC+CGG - chr3_1:76079532-76079551 None:intergenic 35.0%
ATAATTCACATTACGCAGTC+AGG + chr3_1:76079534-76079553 Msa0376060:CDS 35.0%
TAATTCACATTACGCAGTCA+GGG + chr3_1:76079535-76079554 Msa0376060:CDS 35.0%
CAGTTTCAAGCAAGTTTCAA+AGG + chr3_1:76079580-76079599 Msa0376060:CDS 35.0%
GTTTCAAGCAAGTTTCAAAG+GGG + chr3_1:76079582-76079601 Msa0376060:CDS 35.0%
!! ATCTAGTTCTGAGAGGATAA+AGG + chr3_1:76079611-76079630 Msa0376060:CDS 35.0%
!! TCTAGTTCTGAGAGGATAAA+GGG + chr3_1:76079612-76079631 Msa0376060:CDS 35.0%
! AGGGTCCTTTTCTTCAAAAA+TGG + chr3_1:76079721-76079740 Msa0376060:CDS 35.0%
TATATCCCTGTGATTGATGA+TGG + chr3_1:76079801-76079820 Msa0376060:CDS 35.0%
ATGGCAAGAAATGTCTTTCA+CGG + chr3_1:76079820-76079839 Msa0376060:CDS 35.0%
TCTTTCACGGGACAAAAAAA+TGG + chr3_1:76079833-76079852 Msa0376060:CDS 35.0%
! AAACTACGGCAACTGTTTTA+AGG + chr3_1:76079856-76079875 Msa0376060:CDS 35.0%
GGCAATAGCAAAGAGATATA+TGG + chr3_1:76079989-76080008 Msa0376060:CDS 35.0%
GATTCAGAAGTTTACACGAT+TGG + chr3_1:76080217-76080236 Msa0376060:intron 35.0%
TTTATCATTCCGAAGATGAC+AGG + chr3_1:76080302-76080321 Msa0376060:CDS 35.0%
TATTCTTCCAATATGTGCCA+CGG + chr3_1:76080366-76080385 Msa0376060:CDS 35.0%
! GCCACATATATTTTCTCTTG+TGG + chr3_1:76080755-76080774 Msa0376060:intron 35.0%
! AAAGTTATAAGAGGCGGATT+GGG + chr3_1:76081053-76081072 Msa0376060:intron 35.0%
TGTTGTCATCTGCAAAGAAA+AGG - chr3_1:76081128-76081147 None:intergenic 35.0%
TCAGCTCGTTAGACATAATT+AGG - chr3_1:76081190-76081209 None:intergenic 35.0%
CCTTCAGCAAGATTCTTATT+AGG - chr3_1:76081242-76081261 None:intergenic 35.0%
CCTAATAAGAATCTTGCTGA+AGG + chr3_1:76081239-76081258 Msa0376060:intron 35.0%
!! ATTTTTAAGCGTTTGCGTCA+TGG - chr3_1:76081268-76081287 None:intergenic 35.0%
TGCTTAATATGTGTATCTGC+GGG - chr3_1:76081340-76081359 None:intergenic 35.0%
GTGCTTAATATGTGTATCTG+CGG - chr3_1:76081341-76081360 None:intergenic 35.0%
TTCTTTGAACCAAGTCACAA+TGG - chr3_1:76082008-76082027 None:intergenic 35.0%
TGGTTCAAAGAAGAGGAAAA+TGG + chr3_1:76082016-76082035 Msa0376060:intron 35.0%
TTATTGTATCAAAGCCTCCT+TGG - chr3_1:76082362-76082381 None:intergenic 35.0%
TTGGAAAGCCACCTTAATTA+CGG + chr3_1:76082460-76082479 Msa0376060:intron 35.0%
TATAACGTGAGAAATGACTG+AGG - chr3_1:76082613-76082632 None:intergenic 35.0%
! AGTCTTATAATTAGGGATGG+AGG + chr3_1:76082954-76082973 Msa0376060:intron 35.0%
TCTTAGATCACGTAGAGATA+TGG + chr3_1:76083188-76083207 Msa0376060:intron 35.0%
GACTTAAAGTAGTGGTTATG+AGG + chr3_1:76083264-76083283 Msa0376060:intron 35.0%
! ATTCTTAGAATTTGGGGTTG+AGG - chr3_1:76083345-76083364 None:intergenic 35.0%
CCAAGAGAACTGCAATAAAA+AGG - chr3_1:76083657-76083676 None:intergenic 35.0%
! CCTTTTTATTGCAGTTCTCT+TGG + chr3_1:76083654-76083673 Msa0376060:intron 35.0%
! GCAATTTTCATTTCCATTGC+TGG + chr3_1:76083720-76083739 Msa0376060:CDS 35.0%
! TTTCATTTCCATTGCTGGTT+TGG + chr3_1:76083725-76083744 Msa0376060:CDS 35.0%
ATTCCTCATTGGAAATATGC+AGG + chr3_1:76083758-76083777 Msa0376060:CDS 35.0%
! AGTTTAAGACACACTAGCAA+AGG - chr3_1:76084287-76084306 None:intergenic 35.0%
TTGCTAGTGTGTCTTAAACT+AGG + chr3_1:76084287-76084306 Msa0376060:intron 35.0%
TGCTAGTGTGTCTTAAACTA+GGG + chr3_1:76084288-76084307 Msa0376060:intron 35.0%
ATCTTGTGGTATTATGACCT+GGG + chr3_1:76084407-76084426 Msa0376060:intron 35.0%
CTCTATTATTACAACATCCC+AGG - chr3_1:76084427-76084446 None:intergenic 35.0%
!! CTTATATTTTGGGCCTTCTA+AGG + chr3_1:76084448-76084467 Msa0376060:intron 35.0%
TGCAAGTGTTTCCTAGAATA+GGG + chr3_1:76084522-76084541 Msa0376060:intron 35.0%
TATGGAAGTGGAAAAGGAAT+AGG - chr3_1:76084628-76084647 None:intergenic 35.0%
AACCCAATAATAGAATGGTC+CGG - chr3_1:76084742-76084761 None:intergenic 35.0%
ACAGTCAACAACTACAAGAT+TGG + chr3_1:76084820-76084839 Msa0376060:CDS 35.0%
TACAAATGGCAAGAAACTAG+AGG + chr3_1:76084938-76084957 Msa0376060:CDS 35.0%
ATCTTCCCAAGGATTTAAGA+AGG + chr3_1:76084987-76085006 Msa0376060:CDS 35.0%
TCTTCCCAAGGATTTAAGAA+GGG + chr3_1:76084988-76085007 Msa0376060:CDS 35.0%
ATGTCCCTTCTTAAATCCTT+GGG - chr3_1:76084995-76085014 None:intergenic 35.0%
AATGTCCCTTCTTAAATCCT+TGG - chr3_1:76084996-76085015 None:intergenic 35.0%
ACGTACACCCAATATTTGTT+AGG - chr3_1:76085345-76085364 None:intergenic 35.0%
CATGTTCAAACAAATGACGT+GGG - chr3_1:76085471-76085490 None:intergenic 35.0%
ACATGTTCAAACAAATGACG+TGG - chr3_1:76085472-76085491 None:intergenic 35.0%
!! GTGCTGATCATGTTTTTAAC+TGG + chr3_1:76085525-76085544 Msa0376060:intron 35.0%
!! CTGATCATGTTTTTAACTGG+TGG + chr3_1:76085528-76085547 Msa0376060:intron 35.0%
!!! GGTGATTGGCTTATTTTTCA+AGG - chr3_1:76085699-76085718 None:intergenic 35.0%
TTCAAAGCTTCCAATAGCAA+CGG - chr3_1:76085720-76085739 None:intergenic 35.0%
TCTTTCTTGAACGAGATTTC+AGG + chr3_1:76085784-76085803 Msa0376060:intron 35.0%
CTTTCTTTCGTGTAAAGTAC+TGG - chr3_1:76085869-76085888 None:intergenic 35.0%
! TCAGATTTTACTCGCAACAA+TGG + chr3_1:76086197-76086216 Msa0376060:CDS 35.0%
TTCAGCAGTAAAATCTGGTT+CGG - chr3_1:76086476-76086495 None:intergenic 35.0%
! TTTTCACTCGTGAATGAAAC+TGG + chr3_1:76086716-76086735 Msa0376060:three_prime_UTR 35.0%
ATGAATAACGGTACCATACA+AGG + chr3_1:76086835-76086854 Msa0376060:three_prime_UTR 35.0%
TGAATAACGGTACCATACAA+GGG + chr3_1:76086836-76086855 Msa0376060:three_prime_UTR 35.0%
ACCATACAAGGGAAGAAATT+CGG + chr3_1:76086847-76086866 Msa0376060:three_prime_UTR 35.0%
CAAACAGATATTGTAACCCT+AGG + chr3_1:76087054-76087073 Msa0376060:three_prime_UTR 35.0%
!! AGGATTGATGATGATGGTGA+AGG - chr3_1:76078778-76078797 None:intergenic 40.0%
TAATGCGAGGAGTTATGAGA+AGG - chr3_1:76078851-76078870 None:intergenic 40.0%
!!! GACTTGTTGTAGGTTTTGAC+AGG + chr3_1:76078978-76078997 Msa0376060:intron 40.0%
TGTCTGTCTCAATGCTTCAT+AGG + chr3_1:76079377-76079396 Msa0376060:intron 40.0%
GACACATTCGAACACAAATG+TGG - chr3_1:76079417-76079436 None:intergenic 40.0%
CTTCACCGAATGGTTTATCA+TGG + chr3_1:76079436-76079455 Msa0376060:intron 40.0%
!! GATTCGAATCTAGTTCTGAG+AGG + chr3_1:76079604-76079623 Msa0376060:CDS 40.0%
!! TTTTGAAGAAAAGGACCCTG+CGG - chr3_1:76079720-76079739 None:intergenic 40.0%
TCTTGCCATCATCAATCACA+GGG - chr3_1:76079809-76079828 None:intergenic 40.0%
TTCTTGCCATCATCAATCAC+AGG - chr3_1:76079810-76079829 None:intergenic 40.0%
TGGCAAGAAATGTCTTTCAC+GGG + chr3_1:76079821-76079840 Msa0376060:CDS 40.0%
CTTCCAAATACTCGAGAAGA+GGG - chr3_1:76079945-76079964 None:intergenic 40.0%
TCTTCCAAATACTCGAGAAG+AGG - chr3_1:76079946-76079965 None:intergenic 40.0%
TCTTCTCGAGTATTTGGAAG+AGG + chr3_1:76079945-76079964 Msa0376060:CDS 40.0%
! AGTATTTGGAAGAGGTGTGT+TGG + chr3_1:76079953-76079972 Msa0376060:CDS 40.0%
!! TGTGTTGGTTCAAGATGCTT+GGG + chr3_1:76079968-76079987 Msa0376060:CDS 40.0%
AAACTCGCTCTTACATTGCT+AGG + chr3_1:76080268-76080287 Msa0376060:intron 40.0%
GTATAAACCGTGGCACATAT+TGG - chr3_1:76080376-76080395 None:intergenic 40.0%
CATTCTCACTGAAACAGCAT+GGG + chr3_1:76080436-76080455 Msa0376060:CDS 40.0%
TTTCTCTTGTGGTGACTATG+TGG + chr3_1:76080766-76080785 Msa0376060:intron 40.0%
GACACTTATAATGAGACGGA+GGG - chr3_1:76080849-76080868 None:intergenic 40.0%
AGACACTTATAATGAGACGG+AGG - chr3_1:76080850-76080869 None:intergenic 40.0%
CAAAGTTATAAGAGGCGGAT+TGG + chr3_1:76081052-76081071 Msa0376060:intron 40.0%
TAAAGGAGTTGTGCCTTCAT+TGG + chr3_1:76081288-76081307 Msa0376060:intron 40.0%
TCTAGCGATATGTCCAATGA+AGG - chr3_1:76081304-76081323 None:intergenic 40.0%
GGAACCAACATAAAATGACG+TGG - chr3_1:76081401-76081420 None:intergenic 40.0%
TAGAAAGAGAAACCACATGC+TGG + chr3_1:76081623-76081642 Msa0376060:CDS 40.0%
CAATTCTGCCTTTATACACG+TGG - chr3_1:76081671-76081690 None:intergenic 40.0%
!! TGTGACTTGGTTCAAAGAAG+AGG + chr3_1:76082009-76082028 Msa0376060:intron 40.0%
! AATTTTCCCTCTTCTTGAGG+CGG - chr3_1:76082069-76082088 None:intergenic 40.0%
CCTCAAGAAGAGGGAAAATT+GGG + chr3_1:76082069-76082088 Msa0376060:intron 40.0%
CTCAAGAAGAGGGAAAATTG+GGG + chr3_1:76082070-76082089 Msa0376060:intron 40.0%
TCAAGAAGAGGGAAAATTGG+GGG + chr3_1:76082071-76082090 Msa0376060:intron 40.0%
AATTAAGGTGGCTTTCCAAG+AGG - chr3_1:76082459-76082478 None:intergenic 40.0%
CTTGAGACACACCGTAATTA+AGG - chr3_1:76082474-76082493 None:intergenic 40.0%
AAGGCTCTTATAATCAGGGA+AGG - chr3_1:76082694-76082713 None:intergenic 40.0%
CAAAATTTCCGCAAGTAAGG+CGG - chr3_1:76083102-76083121 None:intergenic 40.0%
AGCCAAAATTTCCGCAAGTA+AGG - chr3_1:76083105-76083124 None:intergenic 40.0%
GGAGCTAGGAGTTGTAATTA+AGG - chr3_1:76083134-76083153 None:intergenic 40.0%
CTTCATTGTGTTGAGTGTGA+GGG + chr3_1:76083153-76083172 Msa0376060:intron 40.0%
TTCATTGTGTTGAGTGTGAG+GGG + chr3_1:76083154-76083173 Msa0376060:intron 40.0%
! ACTAGCTTGTAAGGTGAACT+CGG - chr3_1:76083304-76083323 None:intergenic 40.0%
! ACCTTACAAGCTAGTTTGTG+AGG + chr3_1:76083309-76083328 Msa0376060:intron 40.0%
! CTAGTTTGTGAGGCTGAATT+AGG + chr3_1:76083319-76083338 Msa0376060:intron 40.0%
TTGGGGAATCAATAATACCC+AGG + chr3_1:76083438-76083457 Msa0376060:intron 40.0%
!! AAACAAAGGTACTTGTTGCC+AGG - chr3_1:76083686-76083705 None:intergenic 40.0%
TGGCAACAAGTACCTTTGTT+TGG + chr3_1:76083685-76083704 Msa0376060:CDS 40.0%
! GGCAACAAGTACCTTTGTTT+GGG + chr3_1:76083686-76083705 Msa0376060:CDS 40.0%
CAACCTGCATATTTCCAATG+AGG - chr3_1:76083764-76083783 None:intergenic 40.0%
CTCATTGGAAATATGCAGGT+TGG + chr3_1:76083762-76083781 Msa0376060:intron 40.0%
AACAAAAAGGGACAGATCTC+AGG - chr3_1:76083893-76083912 None:intergenic 40.0%
TTTCTTGAGAGTCTCCCAAA+GGG - chr3_1:76084061-76084080 None:intergenic 40.0%
! TTTTCTTGAGAGTCTCCCAA+AGG - chr3_1:76084062-76084081 None:intergenic 40.0%
TTGGGAGACTCTCAAGAAAA+AGG + chr3_1:76084062-76084081 Msa0376060:intron 40.0%
GCACTTTGCTACAATTACAG+TGG + chr3_1:76084107-76084126 Msa0376060:intron 40.0%
TTTAGGTCTCACCCATCATT+GGG - chr3_1:76084179-76084198 None:intergenic 40.0%
!! TTTTAGGTCTCACCCATCAT+TGG - chr3_1:76084180-76084199 None:intergenic 40.0%
!! GACCTAAAACTAGCTTTGAG+AGG + chr3_1:76084191-76084210 Msa0376060:intron 40.0%
!!! CTCCTCTCAAAGCTAGTTTT+AGG - chr3_1:76084196-76084215 None:intergenic 40.0%
!! AAACTAGCTTTGAGAGGAGT+TGG + chr3_1:76084197-76084216 Msa0376060:intron 40.0%
!! AACTAGCTTTGAGAGGAGTT+GGG + chr3_1:76084198-76084217 Msa0376060:intron 40.0%
AGCAAAAAGACCACACATGA+TGG - chr3_1:76084232-76084251 None:intergenic 40.0%
CAAAAAGAGGACCAACACAA+GGG - chr3_1:76084328-76084347 None:intergenic 40.0%
!! CTTGTGTTGGTCCTCTTTTT+GGG + chr3_1:76084327-76084346 Msa0376060:intron 40.0%
!! TTGTGTTGGTCCTCTTTTTG+GGG + chr3_1:76084328-76084347 Msa0376060:intron 40.0%
! CTCTCGTGGAACTATTTTCT+GGG + chr3_1:76084364-76084383 Msa0376060:intron 40.0%
! TCTCGTGGAACTATTTTCTG+GGG + chr3_1:76084365-76084384 Msa0376060:intron 40.0%
GATCTTGTGGTATTATGACC+TGG + chr3_1:76084406-76084425 Msa0376060:intron 40.0%
! ATTCTAGGAAACACTTGCAG+AGG - chr3_1:76084521-76084540 None:intergenic 40.0%
CTGCAAGTGTTTCCTAGAAT+AGG + chr3_1:76084521-76084540 Msa0376060:intron 40.0%
ACCCGGACCATTCTATTATT+GGG + chr3_1:76084737-76084756 Msa0376060:intron 40.0%
ACCCAATAATAGAATGGTCC+GGG - chr3_1:76084741-76084760 None:intergenic 40.0%
GTCAACAACTACAAGATTGG+AGG + chr3_1:76084823-76084842 Msa0376060:CDS 40.0%
TTCTTTCTCTCAAGTGGTCA+GGG - chr3_1:76084901-76084920 None:intergenic 40.0%
ATTCTTTCTCTCAAGTGGTC+AGG - chr3_1:76084902-76084921 None:intergenic 40.0%
GTCTGATTCTTTCTCTCAAG+TGG - chr3_1:76084907-76084926 None:intergenic 40.0%
GACGACATGAGCAATACAAA+TGG + chr3_1:76084924-76084943 Msa0376060:CDS 40.0%
TTTGATCCGTAATCTTCCCA+AGG + chr3_1:76084976-76084995 Msa0376060:CDS 40.0%
AATTCCCATGATTCTTCACC+AGG - chr3_1:76085651-76085670 None:intergenic 40.0%
GGTGCCAATATTTGAGAAGA+TGG + chr3_1:76085805-76085824 Msa0376060:intron 40.0%
! GAAGATGGATGAGCAACTTT+TGG + chr3_1:76085820-76085839 Msa0376060:CDS 40.0%
!! ATGAAGAGCATCTCATCAAC+AGG - chr3_1:76085914-76085933 None:intergenic 40.0%
TTGTTGACCGTGACAACAAA+CGG + chr3_1:76085947-76085966 Msa0376060:CDS 40.0%
CTTCAACTCTGAATACCTCA+AGG + chr3_1:76085985-76086004 Msa0376060:CDS 40.0%
TGTCCAAACTCTTTCAGAAG+TGG + chr3_1:76086090-76086109 Msa0376060:CDS 40.0%
! CTTCCACTTCTGAAAGAGTT+TGG - chr3_1:76086096-76086115 None:intergenic 40.0%
!! AGCATTTGCTCTAAAAGCTG+AGG + chr3_1:76086114-76086133 Msa0376060:CDS 40.0%
AAGCATATATTGTGGCACCT+AGG - chr3_1:76086354-76086373 None:intergenic 40.0%
GTGCCACAATATATGCTTCA+AGG + chr3_1:76086356-76086375 Msa0376060:CDS 40.0%
! CATTTTTACGTATGGCTCGA+AGG - chr3_1:76086396-76086415 None:intergenic 40.0%
CTTCGAGCCATACGTAAAAA+TGG + chr3_1:76086394-76086413 Msa0376060:CDS 40.0%
!!! CCTTGAGCCATTTTTACGTA+TGG - chr3_1:76086404-76086423 None:intergenic 40.0%
CCATACGTAAAAATGGCTCA+AGG + chr3_1:76086401-76086420 Msa0376060:CDS 40.0%
TGCTCTTCAGCAGTAAAATC+TGG - chr3_1:76086481-76086500 None:intergenic 40.0%
!! CTGTTTTTCGCACTTTGTGA+TGG + chr3_1:76086762-76086781 Msa0376060:three_prime_UTR 40.0%
CCATACAAGGGAAGAAATTC+GGG + chr3_1:76086848-76086867 Msa0376060:three_prime_UTR 40.0%
!!! GCGTTTTTTGTGTTGCGTTG+CGG - chr3_1:76078640-76078659 None:intergenic 45.0%
TGTGTCTATGTCTTCGGACA+CGG - chr3_1:76079268-76079287 None:intergenic 45.0%
CGTGTGTGTGTCTATGTCTT+CGG - chr3_1:76079274-76079293 None:intergenic 45.0%
TCGAATGTGTCTTCACCGAA+TGG + chr3_1:76079426-76079445 Msa0376060:intron 45.0%
ATTTCAGGACTGGAGTTCAG+AGG + chr3_1:76079497-76079516 Msa0376060:CDS 45.0%
AGTTCAGAGGTTAACTCTCC+CGG + chr3_1:76079510-76079529 Msa0376060:CDS 45.0%
!! GTGTGTTGGTTCAAGATGCT+TGG + chr3_1:76079967-76079986 Msa0376060:CDS 45.0%
! GAAGAGTTTTCCGTACCTGT+GGG - chr3_1:76080055-76080074 None:intergenic 45.0%
! AGAAGAGTTTTCCGTACCTG+TGG - chr3_1:76080056-76080075 None:intergenic 45.0%
GATTCAGAGCCTGTCATCTT+CGG - chr3_1:76080314-76080333 None:intergenic 45.0%
GGAGCTATTCGTATAAACCG+TGG - chr3_1:76080386-76080405 None:intergenic 45.0%
AAAGAGGTTACAAGGACCTC+TGG + chr3_1:76080413-76080432 Msa0376060:CDS 45.0%
TGTTTCAGTGAGAATGCCAG+AGG - chr3_1:76080432-76080451 None:intergenic 45.0%
GCATTCTCACTGAAACAGCA+TGG + chr3_1:76080435-76080454 Msa0376060:CDS 45.0%
!! TTATAAGAGGCGGATTGGGA+GGG + chr3_1:76081057-76081076 Msa0376060:intron 45.0%
TGCAGATGACAACATACAGC+AGG + chr3_1:76081134-76081153 Msa0376060:intron 45.0%
!! GGGTCCACGTCATTTTATGT+TGG + chr3_1:76081394-76081413 Msa0376060:intron 45.0%
!!! CATAGGTTCTTGGTGCCTTT+TGG + chr3_1:76081587-76081606 Msa0376060:intron 45.0%
AGAAACCACATGCTGGCAAA+GGG + chr3_1:76081630-76081649 Msa0376060:CDS 45.0%
! GTATTGGGCATGAAGCATTC+AGG - chr3_1:76081735-76081754 None:intergenic 45.0%
TTCCTTGATGCCCTTCAATC+TGG + chr3_1:76081790-76081809 Msa0376060:CDS 45.0%
ATATGTACCGCCTCAAGAAG+AGG + chr3_1:76082059-76082078 Msa0376060:intron 45.0%
TATGTACCGCCTCAAGAAGA+GGG + chr3_1:76082060-76082079 Msa0376060:intron 45.0%
GCCTCAAGAAGAGGGAAAAT+TGG + chr3_1:76082068-76082087 Msa0376060:intron 45.0%
! CCCAATTTTCCCTCTTCTTG+AGG - chr3_1:76082072-76082091 None:intergenic 45.0%
CATGGGCATTTGTTTCAACC+AGG + chr3_1:76082140-76082159 Msa0376060:intron 45.0%
GAGACACACCGTAATTAAGG+TGG - chr3_1:76082471-76082490 None:intergenic 45.0%
ACTACTCAAGCTACATCGCT+AGG - chr3_1:76082581-76082600 None:intergenic 45.0%
TTAGTGTTGTGGGGTTGAGA+TGG + chr3_1:76082635-76082654 Msa0376060:intron 45.0%
GCTCTTATAATCAGGGAAGG+AGG - chr3_1:76082691-76082710 None:intergenic 45.0%
! CGCCTTACTTGCGGAAATTT+TGG + chr3_1:76083100-76083119 Msa0376060:intron 45.0%
CTCAACACAATGAAGGAGCT+AGG - chr3_1:76083148-76083167 None:intergenic 45.0%
CCTCACACTCAACACAATGA+AGG - chr3_1:76083155-76083174 None:intergenic 45.0%
CCTTCATTGTGTTGAGTGTG+AGG + chr3_1:76083152-76083171 Msa0376060:intron 45.0%
! GCCTCACAAACTAGCTTGTA+AGG - chr3_1:76083313-76083332 None:intergenic 45.0%
AAATCCCAAGGTCACCTTTC+TGG + chr3_1:76083508-76083527 Msa0376060:intron 45.0%
AATCCCAAGGTCACCTTTCT+GGG + chr3_1:76083509-76083528 Msa0376060:intron 45.0%
ATTCCCAGAAAGGTGACCTT+GGG - chr3_1:76083515-76083534 None:intergenic 45.0%
TATTCCCAGAAAGGTGACCT+TGG - chr3_1:76083516-76083535 None:intergenic 45.0%
ATTATTCCTCCACCCTCTTG+TGG + chr3_1:76083626-76083645 Msa0376060:intron 45.0%
TTATTCCTCCACCCTCTTGT+GGG + chr3_1:76083627-76083646 Msa0376060:intron 45.0%
AAAAAGGATCCCCCACAAGA+GGG - chr3_1:76083641-76083660 None:intergenic 45.0%
TAAAAAGGATCCCCCACAAG+AGG - chr3_1:76083642-76083661 None:intergenic 45.0%
AAAAAGGGACAGATCTCAGG+AGG - chr3_1:76083890-76083909 None:intergenic 45.0%
TATACTTATTGAGCAGGGCC+AGG + chr3_1:76084153-76084172 Msa0376060:intron 45.0%
GACCACACATGATGGCAAAA+AGG - chr3_1:76084224-76084243 None:intergenic 45.0%
TAATTGTCCCACCCTTGTGT+TGG + chr3_1:76084314-76084333 Msa0376060:intron 45.0%
CCAAAAAGAGGACCAACACA+AGG - chr3_1:76084329-76084348 None:intergenic 45.0%
!! CCTTGTGTTGGTCCTCTTTT+TGG + chr3_1:76084326-76084345 Msa0376060:intron 45.0%
TTCATCCACTCCCCAAAAAG+AGG - chr3_1:76084341-76084360 None:intergenic 45.0%
! GCTCTCGTGGAACTATTTTC+TGG + chr3_1:76084363-76084382 Msa0376060:intron 45.0%
!!! ACTATTTTCTGGGGCTGTTC+TGG + chr3_1:76084374-76084393 Msa0376060:intron 45.0%
!!! CTATTTTCTGGGGCTGTTCT+GGG + chr3_1:76084375-76084394 Msa0376060:intron 45.0%
!!! TATTTTCTGGGGCTGTTCTG+GGG + chr3_1:76084376-76084395 Msa0376060:intron 45.0%
!! TCACTGGTTCACCCTATTCT+AGG - chr3_1:76084536-76084555 None:intergenic 45.0%
CACCCGGACCATTCTATTAT+TGG + chr3_1:76084736-76084755 Msa0376060:intron 45.0%
TGGAGGAGATGAGAGTGAAA+AGG + chr3_1:76084840-76084859 Msa0376060:CDS 45.0%
CATTAAGCGTCATCTCTGCT+TGG + chr3_1:76085012-76085031 Msa0376060:CDS 45.0%
!! TCTATTTTGAGGGACCTGCT+AGG - chr3_1:76085220-76085239 None:intergenic 45.0%
TTTGTGAATGCCATGCTTCC+TGG + chr3_1:76085630-76085649 Msa0376060:intron 45.0%
TGATTCTTCACCAGGAAGCA+TGG - chr3_1:76085643-76085662 None:intergenic 45.0%
TGCTTCCTGGTGAAGAATCA+TGG + chr3_1:76085643-76085662 Msa0376060:intron 45.0%
GCTTCCTGGTGAAGAATCAT+GGG + chr3_1:76085644-76085663 Msa0376060:intron 45.0%
AAGCCAATCACCGTTGCTAT+TGG + chr3_1:76085707-76085726 Msa0376060:intron 45.0%
CTTCCAATAGCAACGGTGAT+TGG - chr3_1:76085713-76085732 None:intergenic 45.0%
GAGATGCTCTTCATAATGCG+CGG + chr3_1:76085920-76085939 Msa0376060:CDS 45.0%
!! TCTTCCACCGTTTGTTGTCA+CGG - chr3_1:76085957-76085976 None:intergenic 45.0%
GACAACAAACGGTGGAAGAA+CGG + chr3_1:76085958-76085977 Msa0376060:CDS 45.0%
ACAACAAACGGTGGAAGAAC+GGG + chr3_1:76085959-76085978 Msa0376060:CDS 45.0%
AACTCTGAATACCTCAAGGC+CGG + chr3_1:76085989-76086008 Msa0376060:CDS 45.0%
TGAAAGAGTTTGGACAGTCC+TGG - chr3_1:76086086-76086105 None:intergenic 45.0%
CATGTTTCATACAAGCAGCG+TGG + chr3_1:76086233-76086252 Msa0376060:CDS 45.0%
AGAAGCTCGAAGAGTCTCTA+AGG + chr3_1:76086272-76086291 Msa0376060:CDS 45.0%
GAAGCTCGAAGAGTCTCTAA+GGG + chr3_1:76086273-76086292 Msa0376060:CDS 45.0%
! CTCTAAGGGAAGAGGAGAAT+AGG + chr3_1:76086287-76086306 Msa0376060:CDS 45.0%
GAATAGGCTCCAAGATGCAT+TGG + chr3_1:76086303-76086322 Msa0376060:CDS 45.0%
TATATTGTGGCACCTAGGCT+AGG - chr3_1:76086349-76086368 None:intergenic 45.0%
!! GCAGTAAAATCTGGTTCGGT+AGG - chr3_1:76086472-76086491 None:intergenic 45.0%
ACTCGTGAATGAAACTGGTG+CGG + chr3_1:76086721-76086740 Msa0376060:three_prime_UTR 45.0%
CCCGAATTTCTTCCCTTGTA+TGG - chr3_1:76086851-76086870 None:intergenic 45.0%
!!! ATTTTTATTAATTACTATTT+TGG + chr3_1:76078926-76078945 Msa0376060:intron 5.0%
!! AATAAAAAATAAAAAAAGTA+AGG - chr3_1:76080625-76080644 None:intergenic 5.0%
!!! CATATTTTATTTTTTTTAAA+AGG - chr3_1:76081514-76081533 None:intergenic 5.0%
TGGAAGAGAAGGTTCGTGGA+AGG - chr3_1:76078741-76078760 None:intergenic 50.0%
GAAGTGGAAGAGAAGGTTCG+TGG - chr3_1:76078745-76078764 None:intergenic 50.0%
GCTCCCTCTTCTCGAGTATT+TGG + chr3_1:76079939-76079958 Msa0376060:CDS 50.0%
! AGTTTTCCGTACCTGTGGGA+GGG - chr3_1:76080051-76080070 None:intergenic 50.0%
CTCGCTCTTACATTGCTAGG+TGG + chr3_1:76080271-76080290 Msa0376060:intron 50.0%
GGTGACTATGTGGACACACA+TGG + chr3_1:76080776-76080795 Msa0376060:intron 50.0%
!! GTTATAAGAGGCGGATTGGG+AGG + chr3_1:76081056-76081075 Msa0376060:intron 50.0%
!! TATAAGAGGCGGATTGGGAG+GGG + chr3_1:76081058-76081077 Msa0376060:intron 50.0%
GAGAAACCACATGCTGGCAA+AGG + chr3_1:76081629-76081648 Msa0376060:CDS 50.0%
!! CTCCAGATTGAAGGGCATCA+AGG - chr3_1:76081795-76081814 None:intergenic 50.0%
! TGCCCTTCAATCTGGAGTTG+TGG + chr3_1:76081798-76081817 Msa0376060:CDS 50.0%
! GCCCTTCAATCTGGAGTTGT+GGG + chr3_1:76081799-76081818 Msa0376060:CDS 50.0%
CCCCACAACTCCAGATTGAA+GGG - chr3_1:76081803-76081822 None:intergenic 50.0%
! CCCTTCAATCTGGAGTTGTG+GGG + chr3_1:76081800-76081819 Msa0376060:CDS 50.0%
ACCCCACAACTCCAGATTGA+AGG - chr3_1:76081804-76081823 None:intergenic 50.0%
! ATCTGGAGTTGTGGGGTCAA+TGG + chr3_1:76081807-76081826 Msa0376060:CDS 50.0%
GGTGGGGCCTAAAGAATTTG+AGG + chr3_1:76081860-76081879 Msa0376060:CDS 50.0%
CTATGAGCGCCATTGTGACT+TGG + chr3_1:76081996-76082015 Msa0376060:intron 50.0%
TGCCTTCATTGCCTCCTTCA+TGG + chr3_1:76082520-76082539 Msa0376060:intron 50.0%
GCCTTCATTGCCTCCTTCAT+GGG + chr3_1:76082521-76082540 Msa0376060:intron 50.0%
ACCCATGAAGGAGGCAATGA+AGG - chr3_1:76082525-76082544 None:intergenic 50.0%
GCTACATCGCTAGGTGATGT+GGG - chr3_1:76082572-76082591 None:intergenic 50.0%
AGCTACATCGCTAGGTGATG+TGG - chr3_1:76082573-76082592 None:intergenic 50.0%
CACTTGCATTGTGACACTCC+AGG + chr3_1:76083016-76083035 Msa0376060:intron 50.0%
GGCTTGAGTAGTGCAAGTGA+AGG + chr3_1:76083209-76083228 Msa0376060:intron 50.0%
GTTATGAGGCCTGACTGCAT+GGG + chr3_1:76083278-76083297 Msa0376060:intron 50.0%
TATTCCTCCACCCTCTTGTG+GGG + chr3_1:76083628-76083647 Msa0376060:intron 50.0%
CAGTTCTCTTGGTCAGAACC+TGG + chr3_1:76083665-76083684 Msa0376060:intron 50.0%
! GGCCTTTTTGCCATCATGTG+TGG + chr3_1:76084219-76084238 Msa0376060:intron 50.0%
AAGAGGACCAACACAAGGGT+GGG - chr3_1:76084324-76084343 None:intergenic 50.0%
AAAGAGGACCAACACAAGGG+TGG - chr3_1:76084325-76084344 None:intergenic 50.0%
!! TTGGTCCTCTTTTTGGGGAG+TGG + chr3_1:76084333-76084352 Msa0376060:intron 50.0%
GAGTGGATGAAAAGCTCTCG+TGG + chr3_1:76084350-76084369 Msa0376060:intron 50.0%
CTGGGGAAGTAGTGATCTTG+TGG + chr3_1:76084393-76084412 Msa0376060:intron 50.0%
AGGAAACACTTGCAGAGGCA+AGG - chr3_1:76084516-76084535 None:intergenic 50.0%
AAAGGAGAGACGCAGAACAG+TGG + chr3_1:76084858-76084877 Msa0376060:CDS 50.0%
!! TCTGCTTGGCTTTGCTGATG+AGG + chr3_1:76085026-76085045 Msa0376060:CDS 50.0%
!! CTGCTTGGCTTTGCTGATGA+GGG + chr3_1:76085027-76085046 Msa0376060:CDS 50.0%
GTCTGTCCATAATGCCTAGC+AGG + chr3_1:76085203-76085222 Msa0376060:intron 50.0%
GAAAGCTGCATTGTTCGCGA+AGG + chr3_1:76085884-76085903 Msa0376060:CDS 50.0%
TTGACCGTGACAACAAACGG+TGG + chr3_1:76085950-76085969 Msa0376060:CDS 50.0%
TGGAGAGGAGCTTCTCACAT+GGG + chr3_1:76086021-76086040 Msa0376060:CDS 50.0%
TGGACAGTCCTGGTTGAGAT+GGG - chr3_1:76086076-76086095 None:intergenic 50.0%
TTGGACAGTCCTGGTTGAGA+TGG - chr3_1:76086077-76086096 None:intergenic 50.0%
GTCGAAGCTGCTTACTGTGA+AGG - chr3_1:76086171-76086190 None:intergenic 50.0%
ACTCGCAACAATGGCGTACA+TGG + chr3_1:76086206-76086225 Msa0376060:CDS 50.0%
CTCGCAACAATGGCGTACAT+GGG + chr3_1:76086207-76086226 Msa0376060:CDS 50.0%
GTTTCATACAAGCAGCGTGG+AGG + chr3_1:76086236-76086255 Msa0376060:CDS 50.0%
! CGAAGAGTCTCTAAGGGAAG+AGG + chr3_1:76086279-76086298 Msa0376060:CDS 50.0%
CTTCCTTGGCCAATGCATCT+TGG - chr3_1:76086315-76086334 None:intergenic 50.0%
! CAAGATGCATTGGCCAAGGA+AGG + chr3_1:76086313-76086332 Msa0376060:CDS 50.0%
AGGTGAACTACCACCTTCCT+TGG - chr3_1:76086329-76086348 None:intergenic 50.0%
AAAATGGCTCAAGGAAGCCC+AGG + chr3_1:76086410-76086429 Msa0376060:CDS 50.0%
AAATGGCTCAAGGAAGCCCA+GGG + chr3_1:76086411-76086430 Msa0376060:CDS 50.0%
ATCATGGGAGGTAGTCTCTC+TGG - chr3_1:76086439-76086458 None:intergenic 50.0%
!! GTAGGCTTCTGGAGCATCAT+GGG - chr3_1:76086454-76086473 None:intergenic 50.0%
!! AATCTGGTTCGGTAGGCTTC+TGG - chr3_1:76086465-76086484 None:intergenic 50.0%
TACCTGTGGGAGGGGAAGAA+CGG - chr3_1:76080042-76080061 None:intergenic 55.0%
TTCTTCCCCTCCCACAGGTA+CGG + chr3_1:76080042-76080061 Msa0376060:intron 55.0%
! GTTTTCCGTACCTGTGGGAG+GGG - chr3_1:76080050-76080069 None:intergenic 55.0%
! GAGTTTTCCGTACCTGTGGG+AGG - chr3_1:76080052-76080071 None:intergenic 55.0%
CTCACTGAAACAGCATGGGC+TGG + chr3_1:76080440-76080459 Msa0376060:CDS 55.0%
!! ATAAGAGGCGGATTGGGAGG+GGG + chr3_1:76081059-76081078 Msa0376060:intron 55.0%
ACAAGCCCTTTGCCAGCATG+TGG - chr3_1:76081638-76081657 None:intergenic 55.0%
ACACTCCAGGCCCATAGCTT+GGG + chr3_1:76083029-76083048 Msa0376060:intron 55.0%
TTCCGCAAGTAAGGCGGCTA+GGG - chr3_1:76083096-76083115 None:intergenic 55.0%
TTTCCGCAAGTAAGGCGGCT+AGG - chr3_1:76083097-76083116 None:intergenic 55.0%
GGTTATGAGGCCTGACTGCA+TGG + chr3_1:76083277-76083296 Msa0376060:intron 55.0%
ATTCCTCCACCCTCTTGTGG+GGG + chr3_1:76083629-76083648 Msa0376060:intron 55.0%
GAGGGACCTGCTAGGCATTA+TGG - chr3_1:76085212-76085231 None:intergenic 55.0%
CTCCTCTCCACAGAAGTCAC+CGG - chr3_1:76086011-76086030 None:intergenic 55.0%
GTGGAGAGGAGCTTCTCACA+TGG + chr3_1:76086020-76086039 Msa0376060:CDS 55.0%
GGAAGGTTGGATGCAGAACG+AGG - chr3_1:76086055-76086074 None:intergenic 55.0%
CCTGGTTGAGATGGGAAGGT+TGG - chr3_1:76086068-76086087 None:intergenic 55.0%
CCAACCTTCCCATCTCAACC+AGG + chr3_1:76086065-76086084 Msa0376060:CDS 55.0%
CAGTCCTGGTTGAGATGGGA+AGG - chr3_1:76086072-76086091 None:intergenic 55.0%
TCATACAAGCAGCGTGGAGG+CGG + chr3_1:76086239-76086258 Msa0376060:CDS 55.0%
! GCTCCAAGATGCATTGGCCA+AGG + chr3_1:76086309-76086328 Msa0376060:CDS 55.0%
! GATGCATTGGCCAAGGAAGG+TGG + chr3_1:76086316-76086335 Msa0376060:CDS 55.0%
GGTGGTAGTTCACCTAGCCT+AGG + chr3_1:76086334-76086353 Msa0376060:CDS 55.0%
!! GGTAGGCTTCTGGAGCATCA+TGG - chr3_1:76086455-76086474 None:intergenic 55.0%
TCGCACTTTGTGATGGCCGA+TGG + chr3_1:76086769-76086788 Msa0376060:three_prime_UTR 55.0%
TTGCCTCCTTCATGGGTGCG+AGG + chr3_1:76082528-76082547 Msa0376060:intron 60.0%
TCTCCTCGCACCCATGAAGG+AGG - chr3_1:76082534-76082553 None:intergenic 60.0%
CCTTCATGGGTGCGAGGAGA+CGG + chr3_1:76082534-76082553 Msa0376060:intron 60.0%
CTTCATGGGTGCGAGGAGAC+GGG + chr3_1:76082535-76082554 Msa0376060:intron 60.0%
GACACTCCAGGCCCATAGCT+TGG + chr3_1:76083028-76083047 Msa0376060:intron 60.0%
TCATGCCCAAGCTATGGGCC+TGG - chr3_1:76083037-76083056 None:intergenic 60.0%
GGCCCATAGCTTGGGCATGA+CGG + chr3_1:76083037-76083056 Msa0376060:intron 60.0%
GCCCATAGCTTGGGCATGAC+GGG + chr3_1:76083038-76083057 Msa0376060:intron 60.0%
CCCCGTCATGCCCAAGCTAT+GGG - chr3_1:76083042-76083061 None:intergenic 60.0%
CCCATAGCTTGGGCATGACG+GGG + chr3_1:76083039-76083058 Msa0376060:intron 60.0%
ACCCCGTCATGCCCAAGCTA+TGG - chr3_1:76083043-76083062 None:intergenic 60.0%
! CTTGGGCATGACGGGGTTGT+TGG + chr3_1:76083046-76083065 Msa0376060:intron 60.0%
TCCCCTAGCCGCCTTACTTG+CGG + chr3_1:76083091-76083110 Msa0376060:intron 60.0%
TCCGCAAGTAAGGCGGCTAG+GGG - chr3_1:76083095-76083114 None:intergenic 60.0%
TGAACTCGGCCCATGCAGTC+AGG - chr3_1:76083290-76083309 None:intergenic 60.0%
AAGGATCCCCCACAAGAGGG+TGG - chr3_1:76083638-76083657 None:intergenic 60.0%
GTCTCACCCATCATTGGGCC+TGG - chr3_1:76084174-76084193 None:intergenic 60.0%
CACAGAAGTCACCGGCCTTG+AGG - chr3_1:76086003-76086022 None:intergenic 60.0%
CTCAAGGCCGGTGACTTCTG+TGG + chr3_1:76086001-76086020 Msa0376060:CDS 60.0%
GGTAGTCTCTCTGGCACCCT+GGG - chr3_1:76086430-76086449 None:intergenic 60.0%
AGGTAGTCTCTCTGGCACCC+TGG - chr3_1:76086431-76086450 None:intergenic 60.0%
!! GGCTTCTGGAGCATCATGGG+AGG - chr3_1:76086451-76086470 None:intergenic 60.0%
TGCCGTTCTTCCCCTCCCAC+AGG + chr3_1:76080037-76080056 Msa0376060:CDS 65.0%
CCGTCTCCTCGCACCCATGA+AGG - chr3_1:76082537-76082556 None:intergenic 65.0%
GATCCCCCACAAGAGGGTGG+AGG - chr3_1:76083635-76083654 None:intergenic 65.0%
AGCAGGGCCAGGCCCAATGA+TGG + chr3_1:76084164-76084183 Msa0376060:intron 65.0%
GCAGGGCCAGGCCCAATGAT+GGG + chr3_1:76084165-76084184 Msa0376060:intron 65.0%
GGCCGGTGACTTCTGTGGAG+AGG + chr3_1:76086006-76086025 Msa0376060:CDS 65.0%
!! GAGGCGGATTGGGAGGGGGA+AGG + chr3_1:76081063-76081082 Msa0376060:intron 70.0%
CATGGGTGCGAGGAGACGGG+AGG + chr3_1:76082538-76082557 Msa0376060:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 76078617 76087211 76078617 ID=Msa0376060;Name=Msa0376060
chr3_1 mRNA 76078617 76087211 76078617 ID=Msa0376060-mRNA-1;Parent=Msa0376060;Name=Msa0376060-mRNA-1;_AED=0.07;_eAED=0.07;_QI=329|1|1|1|0.71|0.75|8|707|713
chr3_1 exon 76078617 76078844 76078617 ID=Msa0376060-mRNA-1:exon:17884;Parent=Msa0376060-mRNA-1
chr3_1 exon 76078990 76079119 76078990 ID=Msa0376060-mRNA-1:exon:17885;Parent=Msa0376060-mRNA-1
chr3_1 exon 76079497 76080058 76079497 ID=Msa0376060-mRNA-1:exon:17886;Parent=Msa0376060-mRNA-1
chr3_1 exon 76080290 76080502 76080290 ID=Msa0376060-mRNA-1:exon:17887;Parent=Msa0376060-mRNA-1
chr3_1 exon 76081592 76081881 76081592 ID=Msa0376060-mRNA-1:exon:17888;Parent=Msa0376060-mRNA-1
chr3_1 exon 76083668 76083779 76083668 ID=Msa0376060-mRNA-1:exon:17889;Parent=Msa0376060-mRNA-1
chr3_1 exon 76084812 76085048 76084812 ID=Msa0376060-mRNA-1:exon:17890;Parent=Msa0376060-mRNA-1
chr3_1 exon 76085806 76087211 76085806 ID=Msa0376060-mRNA-1:exon:17891;Parent=Msa0376060-mRNA-1
chr3_1 five_prime_UTR 76078617 76078844 76078617 ID=Msa0376060-mRNA-1:five_prime_utr;Parent=Msa0376060-mRNA-1
chr3_1 five_prime_UTR 76078990 76079090 76078990 ID=Msa0376060-mRNA-1:five_prime_utr;Parent=Msa0376060-mRNA-1
chr3_1 CDS 76079091 76079119 76079091 ID=Msa0376060-mRNA-1:cds;Parent=Msa0376060-mRNA-1
chr3_1 CDS 76079497 76080058 76079497 ID=Msa0376060-mRNA-1:cds;Parent=Msa0376060-mRNA-1
chr3_1 CDS 76080290 76080502 76080290 ID=Msa0376060-mRNA-1:cds;Parent=Msa0376060-mRNA-1
chr3_1 CDS 76081592 76081881 76081592 ID=Msa0376060-mRNA-1:cds;Parent=Msa0376060-mRNA-1
chr3_1 CDS 76083668 76083779 76083668 ID=Msa0376060-mRNA-1:cds;Parent=Msa0376060-mRNA-1
chr3_1 CDS 76084812 76085048 76084812 ID=Msa0376060-mRNA-1:cds;Parent=Msa0376060-mRNA-1
chr3_1 CDS 76085806 76086504 76085806 ID=Msa0376060-mRNA-1:cds;Parent=Msa0376060-mRNA-1
chr3_1 three_prime_UTR 76086505 76087211 76086505 ID=Msa0376060-mRNA-1:three_prime_utr;Parent=Msa0376060-mRNA-1
Gene Sequence

>Msa0376060

ATGACTTTTCATCAAGATAAATTTGTTAGATTTCAGGACTGGAGTTCAGAGGTTAACTCTCCCGGAATAATTCACATTACGCAGTCAGGGAGAATTAAAACTACACTGAAATCAGTTTCAAGCAAGTTTCAAAGGGGATTCGAATCTAGTTCTGAGAGGATAAAGGGATTTGCAAAAAAACCTTTTAAATCTTTTTCACAAAGCTGTGCTCTTACTAGATGTTTTAGTTCTAGAAATAAAATTCTTGATCCGCAGGGTCCTTTTCTTCAAAAATGGAACAAAATATTTGTGTTATCGTGTCTTATTGCTGTATCGATTGATCCTTTGTTCTTTTATATCCCTGTGATTGATGATGGCAAGAAATGTCTTTCACGGGACAAAAAAATGGAAACTACGGCAACTGTTTTAAGGTCTTTCTCCGACATTTTTTATATTATTCATATAATTTTTCAATTTCGTACTGGATTTATTGCTCCCTCTTCTCGAGTATTTGGAAGAGGTGTGTTGGTTCAAGATGCTTGGGCAATAGCAAAGAGATATATGGCATCATATTTCTTAGTTGACATTCTTGCCGTTCTTCCCCTCCCACAGGTGGTTATTCTATTTATCATTCCGAAGATGACAGGCTCTGAATCACTGAACACGAAAAACTTGCTGAAATTTATTGTATTCTTCCAATATGTGCCACGGTTTATACGAATAGCTCCACTATATAAAGAGGTTACAAGGACCTCTGGCATTCTCACTGAAACAGCATGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTTGCAAGTCATGTTCTTGGTGCCTTTTGGTATTTGTTTTCTATAGAAAGAGAAACCACATGCTGGCAAAGGGCTTGTCAAAAAAATACCACGTGTATAAAGGCAGAATTGTATTGTGATGATCATCATGGATTGAGCACAATTACAACATTCCTGAATGCTTCATGCCCAATACAGAATCCAGATAAAAAGCTCTTTGATTTTGGAATTTTCCTTGATGCCCTTCAATCTGGAGTTGTGGGGTCAATGGACTTCCCACAGAAATTTTTTTATTGTTTTTGGTGGGGCCTAAAGAATTTGAGTTCTCTTGGTCAGAACCTGGCAACAAGTACCTTTGTTTGGGAAATCTTCTTTGCAATTTTCATTTCCATTGCTGGTTTGGTATTATTTGCATTCCTCATTGGAAATATGCAGACATATTTACAGTCAACAACTACAAGATTGGAGGAGATGAGAGTGAAAAGGAGAGACGCAGAACAGTGGATGTCACATCGACTACTCCCTGACCACTTGAGAGAAAGAATCAGACGACATGAGCAATACAAATGGCAAGAAACTAGAGGAGTTGATGAAGACAATTTGATCCGTAATCTTCCCAAGGATTTAAGAAGGGACATTAAGCGTCATCTCTGCTTGGCTTTGCTGATGAGGGTGCCAATATTTGAGAAGATGGATGAGCAACTTTTGGATGCAGTGTGTGACTGTCTCAAACCAGTACTTTACACGAAAGAAAGCTGCATTGTTCGCGAAGGAGATCCTGTTGATGAGATGCTCTTCATAATGCGCGGCAAATTGTTGACCGTGACAACAAACGGTGGAAGAACGGGTTTCTTCAACTCTGAATACCTCAAGGCCGGTGACTTCTGTGGAGAGGAGCTTCTCACATGGGCATTAGATCCTCGTTCTGCATCCAACCTTCCCATCTCAACCAGGACTGTCCAAACTCTTTCAGAAGTGGAAGCATTTGCTCTAAAAGCTGAGGATTTGAAGTTTGTTGCATCTCAATTTCGGCGCCTTCACAGTAAGCAGCTTCGACACACTTTCAGATTTTACTCGCAACAATGGCGTACATGGGCTGCATGTTTCATACAAGCAGCGTGGAGGCGGTATTGTAAAAAGAAGCTCGAAGAGTCTCTAAGGGAAGAGGAGAATAGGCTCCAAGATGCATTGGCCAAGGAAGGTGGTAGTTCACCTAGCCTAGGTGCCACAATATATGCTTCAAGGTTTGCTGCAAATGTCCTTCGAGCCATACGTAAAAATGGCTCAAGGAAGCCCAGGGTGCCAGAGAGACTACCTCCCATGATGCTCCAGAAGCCTACCGAACCAGATTTTACTGCTGAAGAGCAATAG
Protein sequence

>Msa0376060

MTFHQDKFVRFQDWSSEVNSPGIIHITQSGRIKTTLKSVSSKFQRGFESSSERIKGFAKKPFKSFSQSCALTRCFSSRNKILDPQGPFLQKWNKIFVLSCLIAVSIDPLFFYIPVIDDGKKCLSRDKKMETTATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVQDAWAIAKRYMASYFLVDILAVLPLPQVVILFIIPKMTGSESLNTKNLLKFIVFFQYVPRFIRIAPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWQRACQKNTTCIKAELYCDDHHGLSTITTFLNASCPIQNPDKKLFDFGIFLDALQSGVVGSMDFPQKFFYCFWWGLKNLSSLGQNLATSTFVWEIFFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDHLRERIRRHEQYKWQETRGVDEDNLIRNLPKDLRRDIKRHLCLALLMRVPIFEKMDEQLLDAVCDCLKPVLYTKESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPRSASNLPISTRTVQTLSEVEAFALKAEDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCKKKLEESLREEENRLQDALAKEGGSSPSLGATIYASRFAANVLRAIRKNGSRKPRVPERLPPMMLQKPTEPDFTAEEQ*