AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0516060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0516060 MtrunA17_Chr3g0126541 99.299 713 5 0 1 713 1 713 0.0 1467
Msa0516060 MtrunA17_Chr1g0158861 78.631 716 147 4 2 713 3 716 0.0 1160
Msa0516060 MtrunA17_Chr7g0275581 65.035 715 239 7 7 713 7 718 0.0 918
Msa0516060 MtrunA17_Chr8g0347121 58.322 751 242 12 1 708 1 723 0.0 829
Msa0516060 MtrunA17_Chr4g0073941 57.856 681 274 7 38 712 56 729 0.0 790
Msa0516060 MtrunA17_Chr2g0326871 50.683 732 311 11 1 711 1 703 0.0 715
Msa0516060 MtrunA17_Chr2g0305771 54.021 659 267 7 78 711 40 687 0.0 709
Msa0516060 MtrunA17_Chr3g0139071 49.799 745 321 14 1 713 1 724 0.0 703
Msa0516060 MtrunA17_Chr4g0001481 51.304 690 312 6 37 710 57 738 0.0 697
Msa0516060 MtrunA17_Chr4g0028861 57.093 578 237 5 70 638 106 681 0.0 684
Msa0516060 MtrunA17_Chr1g0181121 50.875 686 310 11 45 711 4 681 0.0 680
Msa0516060 MtrunA17_Chr7g0228181 50.998 651 293 9 78 712 41 681 0.0 670
Msa0516060 MtrunA17_Chr3g0125651 50.220 683 293 7 62 709 17 687 0.0 659
Msa0516060 MtrunA17_Chr6g0481021 39.968 623 324 17 40 638 94 690 3.15e-133 409
Msa0516060 MtrunA17_Chr6g0480671 40.068 589 318 12 80 648 192 765 1.01e-126 394
Msa0516060 MtrunA17_Chr6g0480851 38.980 608 327 14 55 642 167 750 2.86e-125 390
Msa0516060 MtrunA17_Chr6g0480781 35.948 612 352 16 55 648 152 741 1.33e-121 381
Msa0516060 MtrunA17_Chr8g0360821 36.696 575 329 11 82 634 63 624 2.04e-117 367
Msa0516060 MtrunA17_Chr7g0218341 36.252 571 344 9 79 634 107 672 9.86e-112 353
Msa0516060 MtrunA17_Chr6g0480741 33.795 577 353 10 71 631 105 668 9.26e-98 316
Msa0516060 MtrunA17_Chr6g0480681 32.593 675 363 21 26 639 57 700 3.47e-94 308
Msa0516060 MtrunA17_Chr2g0318561 37.363 455 259 10 197 634 2 447 5.47e-93 298
Msa0516060 MtrunA17_Chr5g0395421 35.977 353 195 9 279 615 18 355 3.88e-53 188
Msa0516060 MtrunA17_Chr2g0326861 45.596 193 103 2 156 346 14 206 3.38e-52 180
Msa0516060 MtrunA17_Chr5g0395411 37.004 227 119 6 55 280 155 358 3.79e-42 157
Msa0516060 MtrunA17_Chr2g0326851 50.000 140 56 3 577 711 3 133 9.10e-35 128
Msa0516060 MtrunA17_Chr6g0480771 35.317 252 140 6 398 636 12 253 1.04e-34 134
Msa0516060 MtrunA17_Chr6g0480841 41.919 198 95 5 452 636 2 192 1.77e-33 128
Msa0516060 MtrunA17_Chr6g0480791 31.928 166 102 4 40 203 139 295 1.12e-22 99.0
Msa0516060 MtrunA17_Chr6g0480751 32.911 158 94 2 41 198 70 215 2.61e-22 96.3
Msa0516060 MtrunA17_Chr2g0318551 31.875 160 93 4 73 228 52 199 5.36e-16 77.8
Msa0516060 MtrunA17_Chr2g0277651 20.290 483 304 15 135 609 108 517 3.66e-15 79.7
Msa0516060 MtrunA17_Chr6g0480821 27.317 205 138 8 184 382 10 209 1.11e-13 70.9
Msa0516060 MtrunA17_Chr4g0063141 25.243 206 149 4 352 555 239 441 2.34e-13 73.9
Msa0516060 MtrunA17_Chr3g0138671 22.059 204 154 3 353 555 243 442 1.72e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0516060 AT5G53130.1 78.303 719 146 6 1 712 1 716 0.0 1144
Msa0516060 AT1G01340.2 60.468 726 254 7 1 712 1 707 0.0 892
Msa0516060 AT1G01340.1 65.123 648 210 4 77 712 59 702 0.0 888
Msa0516060 AT4G01010.1 60.918 719 244 8 1 709 1 692 0.0 884
Msa0516060 AT4G01010.2 60.918 719 244 8 1 709 1 692 0.0 884
Msa0516060 AT2G46430.1 58.726 722 270 10 1 712 2 705 0.0 846
Msa0516060 AT2G46430.2 58.726 722 270 10 1 712 2 705 0.0 846
Msa0516060 AT2G23980.9 56.168 689 290 5 37 713 59 747 0.0 801
Msa0516060 AT2G23980.10 56.168 689 290 5 37 713 59 747 0.0 801
Msa0516060 AT2G23980.1 56.168 689 290 5 37 713 59 747 0.0 801
Msa0516060 AT2G23980.4 56.168 689 290 5 37 713 59 747 0.0 801
Msa0516060 AT2G23980.5 56.168 689 290 5 37 713 59 747 0.0 801
Msa0516060 AT2G23980.6 56.168 689 290 5 37 713 32 720 0.0 800
Msa0516060 AT4G30560.1 57.122 681 273 6 40 712 62 731 0.0 799
Msa0516060 AT4G30560.4 57.122 681 273 6 40 712 62 731 0.0 799
Msa0516060 AT4G30560.5 57.122 681 273 6 40 712 36 705 0.0 798
Msa0516060 AT4G30560.2 57.122 681 273 6 40 712 36 705 0.0 798
Msa0516060 AT4G30560.3 57.122 681 273 6 40 712 36 705 0.0 798
Msa0516060 AT2G23980.3 54.494 712 289 6 37 713 59 770 0.0 787
Msa0516060 AT2G23980.2 54.494 712 289 6 37 713 59 770 0.0 787
Msa0516060 AT2G23980.8 54.494 712 289 6 37 713 59 770 0.0 787
Msa0516060 AT2G23980.7 54.494 712 289 6 37 713 59 770 0.0 787
Msa0516060 AT5G57940.1 54.345 725 309 7 1 711 1 717 0.0 783
Msa0516060 AT5G57940.2 54.345 725 309 7 1 711 1 717 0.0 783
Msa0516060 AT5G57940.3 54.132 726 302 8 1 711 1 710 0.0 781
Msa0516060 AT1G19780.1 51.673 747 311 9 4 710 10 746 0.0 766
Msa0516060 AT1G15990.1 52.503 739 310 11 4 711 10 738 0.0 756
Msa0516060 AT2G28260.1 51.034 725 294 10 1 711 1 678 0.0 712
Msa0516060 AT2G28260.2 54.160 661 260 7 65 711 7 638 0.0 709
Msa0516060 AT2G24610.1 52.985 670 268 10 78 712 69 726 0.0 698
Msa0516060 AT2G24610.2 52.985 670 268 10 78 712 84 741 0.0 697
Msa0516060 AT4G30360.1 51.976 658 280 9 81 712 71 718 0.0 681
Msa0516060 AT3G48010.1 50.374 669 289 8 78 708 41 704 0.0 674
Msa0516060 AT5G14870.1 48.741 675 300 8 78 713 37 704 0.0 659
Msa0516060 AT2G46440.1 55.405 592 247 8 89 670 37 621 0.0 640
Msa0516060 AT2G46450.4 49.289 633 291 10 89 712 37 648 0.0 598
Msa0516060 AT2G46450.1 49.289 633 291 10 89 712 37 648 0.0 598
Msa0516060 AT1G19780.2 54.797 542 209 7 197 710 2 535 0.0 596
Msa0516060 AT2G46450.3 47.551 633 279 11 89 712 24 612 0.0 563
Msa0516060 AT2G46450.2 47.551 633 279 11 89 712 37 625 0.0 562
Msa0516060 AT2G46440.2 59.101 445 168 7 236 670 3 443 3.80e-176 511
Msa0516060 AT3G17690.1 37.375 602 339 15 56 640 138 718 1.40e-123 385
Msa0516060 AT3G17700.1 38.584 565 322 10 81 631 192 745 4.95e-119 374
Msa0516060 AT5G15410.1 35.839 572 343 9 79 631 111 677 6.89e-112 355
Msa0516060 AT5G15410.2 35.839 572 343 9 79 631 110 676 7.79e-112 355
Msa0516060 AT5G54250.2 34.459 592 358 10 68 634 59 645 7.02e-111 351
Msa0516060 AT5G54250.1 34.459 592 358 10 68 634 59 645 7.02e-111 351
Msa0516060 AT5G54250.4 34.459 592 358 10 68 634 59 645 7.02e-111 351
Msa0516060 AT3G17690.2 37.524 517 295 11 54 562 136 632 4.43e-110 347
Msa0516060 AT3G17700.2 38.900 491 287 7 81 569 192 671 1.66e-107 342
Msa0516060 AT5G54250.3 33.953 592 356 11 68 634 59 640 5.50e-106 338
Msa0516060 AT3G17690.3 35.878 393 227 10 55 439 141 516 1.26e-73 248

Find 184 sgRNAs with CRISPR-Local

Find 597 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATGATGTTTAGATTTC+AGG 0.178608 3_4:+67483825 Msa0516060:intron
CATTTGTTCTAGTACCATTT+TGG 0.181352 3_4:-67491311 None:intergenic
TTTACTTCTTCATAGGTTCT+TGG 0.239651 3_4:+67485920 Msa0516060:intron
CATAGGTTCTTGGTGCCTTT+TGG 0.239954 3_4:+67485930 Msa0516060:intron
CTTCCACTTCTGAAAGAGTT+TGG 0.261316 3_4:-67490596 None:intergenic
TCATCCATCTTCTCAAATAT+TGG 0.272792 3_4:-67490312 None:intergenic
TTTCATTTCCATTGCTGGTT+TGG 0.276243 3_4:+67488068 Msa0516060:CDS
GCTCCCTCTTCTCGAGTATT+TGG 0.281314 3_4:+67484282 Msa0516060:CDS
AATCTGGTTCGGTAGGCTTC+TGG 0.288039 3_4:-67490965 None:intergenic
TTCACTTATTTCTCATGAAT+TGG 0.291218 3_4:+67483166 Msa0516060:five_prime_UTR
CTGCGTAATGTGAATTATTC+CGG 0.292496 3_4:-67483872 None:intergenic
CCCGAATTTCTTCCCTTGTA+TGG 0.311997 3_4:-67491351 None:intergenic
AGAAGCTCGAAGAGTCTCTA+AGG 0.322669 3_4:+67490775 Msa0516060:CDS
TTCCTTGATGCCCTTCAATC+TGG 0.329443 3_4:+67486133 Msa0516060:CDS
TGGCAACAAGTACCTTTGTT+TGG 0.341740 3_4:+67488028 Msa0516060:CDS
TTAAATCCTTGGGAAGATTA+CGG 0.342810 3_4:-67489485 None:intergenic
ACCATACAAGGGAAGAAATT+CGG 0.344726 3_4:+67491350 Msa0516060:three_prime_UTR
AATGTCCCTTCTTAAATCCT+TGG 0.349785 3_4:-67489496 None:intergenic
GAAGATGGATGAGCAACTTT+TGG 0.350421 3_4:+67490323 Msa0516060:CDS
TAAAAGTGATAAACTGATAA+AGG 0.353598 3_4:-67491377 None:intergenic
ATTCTTTCTCTCAAGTGGTC+AGG 0.356933 3_4:-67489402 None:intergenic
AGTTTGTTGCATCTCAATTT+CGG 0.361126 3_4:+67490646 Msa0516060:CDS
GGCAACAAGTACCTTTGTTT+GGG 0.366892 3_4:+67488029 Msa0516060:CDS
ATCTAGTTCTGAGAGGATAA+AGG 0.372558 3_4:+67483954 Msa0516060:CDS
GTATTGGGCATGAAGCATTC+AGG 0.376090 3_4:-67486075 None:intergenic
TGCTCTTCAGCAGTAAAATC+TGG 0.380553 3_4:-67490981 None:intergenic
AGGTAGTCTCTCTGGCACCC+TGG 0.388492 3_4:-67490931 None:intergenic
GTATTATTTGCATTCCTCAT+TGG 0.391249 3_4:+67488090 Msa0516060:CDS
GGCAATAGCAAAGAGATATA+TGG 0.392870 3_4:+67484332 Msa0516060:CDS
AAGCAAACCTCAAATTCTTT+AGG 0.394576 3_4:-67486210 None:intergenic
CCATACAAGGGAAGAAATTC+GGG 0.400979 3_4:+67491351 Msa0516060:three_prime_UTR
ACAACAAACGGTGGAAGAAC+GGG 0.404405 3_4:+67490462 Msa0516060:CDS
CTTCCTTGGCCAATGCATCT+TGG 0.404702 3_4:-67490815 None:intergenic
GTATAAACCGTGGCACATAT+TGG 0.407900 3_4:-67484716 None:intergenic
TTCATCAAGATAAATTTGTT+AGG 0.409438 3_4:+67483441 Msa0516060:CDS
ACTCGCAACAATGGCGTACA+TGG 0.414933 3_4:+67490709 Msa0516060:CDS
ATAATTCACATTACGCAGTC+AGG 0.418467 3_4:+67483877 Msa0516060:CDS
GCCCTTCAATCTGGAGTTGT+GGG 0.423331 3_4:+67486142 Msa0516060:CDS
TGGAGGAGATGAGAGTGAAA+AGG 0.424516 3_4:+67489343 Msa0516060:CDS
GGTAGTCTCTCTGGCACCCT+GGG 0.425998 3_4:-67490930 None:intergenic
ATGTCCCTTCTTAAATCCTT+GGG 0.426279 3_4:-67489495 None:intergenic
ATCTGGAGTTGTGGGGTCAA+TGG 0.428895 3_4:+67486150 Msa0516060:CDS
ACAGTCAACAACTACAAGAT+TGG 0.430528 3_4:+67489323 Msa0516060:CDS
GGTGCCAATATTTGAGAAGA+TGG 0.434132 3_4:+67490308 Msa0516060:intron
CTTGTAACCTCTTTATATAG+TGG 0.439424 3_4:-67484747 None:intergenic
CTTTCTTTCGTGTAAAGTAC+TGG 0.440645 3_4:-67490369 None:intergenic
AATTAGAATGAAATTATGAT+AGG 0.441711 3_4:+67491076 Msa0516060:three_prime_UTR
ATGAAGAGCATCTCATCAAC+AGG 0.441941 3_4:-67490414 None:intergenic
ATGAATAACGGTACCATACA+AGG 0.446565 3_4:+67491338 Msa0516060:three_prime_UTR
AAATAACAAAACTGACATCT+TGG 0.448095 3_4:-67491103 None:intergenic
GTGCCACAATATATGCTTCA+AGG 0.449161 3_4:+67490859 Msa0516060:CDS
TCTAGTTCTGAGAGGATAAA+GGG 0.450631 3_4:+67483955 Msa0516060:CDS
CAGTTCTCTTGGTCAGAACC+TGG 0.452079 3_4:+67488008 Msa0516060:intron
TGCGTAATGTGAATTATTCC+GGG 0.455347 3_4:-67483871 None:intergenic
GGTGGGGCCTAAAGAATTTG+AGG 0.456770 3_4:+67486203 Msa0516060:CDS
TGAAAGAGTTTGGACAGTCC+TGG 0.457546 3_4:-67490586 None:intergenic
GTCTGATTCTTTCTCTCAAG+TGG 0.459265 3_4:-67489407 None:intergenic
AAGAATTGAAGTGGAAGAGA+AGG 0.464008 3_4:-67483092 None:intergenic
AGTTTCAAGCAAGTTTCAAA+GGG 0.465299 3_4:+67483924 Msa0516060:CDS
CAGTTTCAAGCAAGTTTCAA+AGG 0.465351 3_4:+67483923 Msa0516060:CDS
GATTCAGAGCCTGTCATCTT+CGG 0.465499 3_4:-67484654 None:intergenic
TGCCGTTCTTCCCCTCCCAC+AGG 0.466202 3_4:+67484380 Msa0516060:CDS
CTGCTTGGCTTTGCTGATGA+GGG 0.473481 3_4:+67489530 Msa0516060:CDS
TTCTTTCTCTCAAGTGGTCA+GGG 0.474389 3_4:-67489401 None:intergenic
CTCTAAGGGAAGAGGAGAAT+AGG 0.475787 3_4:+67490790 Msa0516060:CDS
AAATAAAATTCTTGATCCGC+AGG 0.476532 3_4:+67484044 Msa0516060:CDS
TATATCCCTGTGATTGATGA+TGG 0.477487 3_4:+67484144 Msa0516060:CDS
TTGGACAGTCCTGGTTGAGA+TGG 0.479012 3_4:-67490577 None:intergenic
ATCATGGGAGGTAGTCTCTC+TGG 0.479793 3_4:-67490939 None:intergenic
TTCTTGCCATCATCAATCAC+AGG 0.485569 3_4:-67484150 None:intergenic
TGATGTTTAGATTTCAGGAC+TGG 0.486115 3_4:+67483830 Msa0516060:intron
CTCACTGAAACAGCATGGGC+TGG 0.490891 3_4:+67484783 Msa0516060:CDS
TCTTCCACCGTTTGTTGTCA+CGG 0.491871 3_4:-67490457 None:intergenic
TCTGCTTGGCTTTGCTGATG+AGG 0.497625 3_4:+67489529 Msa0516060:CDS
TTGTTGACCGTGACAACAAA+CGG 0.498587 3_4:+67490450 Msa0516060:CDS
ATCTTCCCAAGGATTTAAGA+AGG 0.498930 3_4:+67489490 Msa0516060:CDS
TGTGTTGGTTCAAGATGCTT+GGG 0.500321 3_4:+67484311 Msa0516060:CDS
ATTCCTCATTGGAAATATGC+AGG 0.500965 3_4:+67488101 Msa0516060:CDS
CGAAGAGTCTCTAAGGGAAG+AGG 0.502897 3_4:+67490782 Msa0516060:CDS
TTTATCATTCCGAAGATGAC+AGG 0.506619 3_4:+67484645 Msa0516060:CDS
CTCCAGATTGAAGGGCATCA+AGG 0.507823 3_4:-67486135 None:intergenic
CACTATATAAAGAGGTTACA+AGG 0.511458 3_4:+67484748 Msa0516060:CDS
AAACAAAGGTACTTGTTGCC+AGG 0.512386 3_4:-67488026 None:intergenic
TCTTCTCGAGTATTTGGAAG+AGG 0.512473 3_4:+67484288 Msa0516060:CDS
GTGTGTTGGTTCAAGATGCT+TGG 0.512801 3_4:+67484310 Msa0516060:CDS
GAAATAAGTGAAGTAATGTA+AGG 0.514204 3_4:-67483155 None:intergenic
GAGAAACCACATGCTGGCAA+AGG 0.516634 3_4:+67485972 Msa0516060:CDS
TTCAGCAGTAAAATCTGGTT+CGG 0.516650 3_4:-67490976 None:intergenic
GACAACAAACGGTGGAAGAA+CGG 0.517367 3_4:+67490461 Msa0516060:CDS
AAGAGCAATAGTGTAATCAA+TGG 0.518572 3_4:+67490997 Msa0516060:exon
TGGACAGTCCTGGTTGAGAT+GGG 0.519210 3_4:-67490576 None:intergenic
TGCCCTTCAATCTGGAGTTG+TGG 0.519473 3_4:+67486141 Msa0516060:CDS
AAAGAGGTTACAAGGACCTC+TGG 0.523467 3_4:+67484756 Msa0516060:CDS
ACCCCACAACTCCAGATTGA+AGG 0.526110 3_4:-67486144 None:intergenic
AGGTGAACTACCACCTTCCT+TGG 0.526375 3_4:-67490829 None:intergenic
TATAGAAAACAAATACCAAA+AGG 0.526421 3_4:-67485945 None:intergenic
GTAGGCTTCTGGAGCATCAT+GGG 0.527145 3_4:-67490954 None:intergenic
CTGTAAGAAAAGAAAAGAAA+TGG 0.527777 3_4:+67491036 Msa0516060:three_prime_UTR
GGTAGGCTTCTGGAGCATCA+TGG 0.527893 3_4:-67490955 None:intergenic
CATTAAGCGTCATCTCTGCT+TGG 0.528466 3_4:+67489515 Msa0516060:CDS
GCAGTAAAATCTGGTTCGGT+AGG 0.529158 3_4:-67490972 None:intergenic
AATAGCTCCACTATATAAAG+AGG 0.531901 3_4:+67484740 Msa0516060:CDS
ATGGCAAGAAATGTCTTTCA+CGG 0.534720 3_4:+67484163 Msa0516060:CDS
AGAAACCACATGCTGGCAAA+GGG 0.535280 3_4:+67485973 Msa0516060:CDS
TCATACAAGCAGCGTGGAGG+CGG 0.537327 3_4:+67490742 Msa0516060:CDS
GAAGTGGAAGAGAAGGTTCG+TGG 0.537972 3_4:-67483085 None:intergenic
AACAAATGTCAAATGAATAA+CGG 0.538196 3_4:+67491326 Msa0516060:three_prime_UTR
AAAATGGCTCAAGGAAGCCC+AGG 0.538256 3_4:+67490913 Msa0516060:CDS
GAATAGGCTCCAAGATGCAT+TGG 0.545962 3_4:+67490806 Msa0516060:CDS
ACAAGCCCTTTGCCAGCATG+TGG 0.545968 3_4:-67485978 None:intergenic
CCCCACAACTCCAGATTGAA+GGG 0.546523 3_4:-67486143 None:intergenic
AACTCTGAATACCTCAAGGC+CGG 0.549969 3_4:+67490492 Msa0516060:CDS
TTGTATTGTGATGATCATCA+TGG 0.551055 3_4:+67486031 Msa0516060:CDS
AGTTCAGAGGTTAACTCTCC+CGG 0.551091 3_4:+67483853 Msa0516060:CDS
TACCTGTGGGAGGGGAAGAA+CGG 0.553125 3_4:-67484382 None:intergenic
TGGAAGAGAAGGTTCGTGGA+AGG 0.554690 3_4:-67483081 None:intergenic
GACGACATGAGCAATACAAA+TGG 0.558039 3_4:+67489427 Msa0516060:CDS
TCGCACTTTGTGATGGCCGA+TGG 0.558752 3_4:+67491272 Msa0516060:three_prime_UTR
TGAAGGAAGAAGAATTGAAG+TGG 0.561658 3_4:-67483101 None:intergenic
CCTGGTTGAGATGGGAAGGT+TGG 0.564304 3_4:-67490568 None:intergenic
AGTATTTGGAAGAGGTGTGT+TGG 0.566289 3_4:+67484296 Msa0516060:CDS
CACAGAAGTCACCGGCCTTG+AGG 0.566343 3_4:-67490503 None:intergenic
CAAACAGATATTGTAACCCT+AGG 0.568796 3_4:+67491557 Msa0516060:three_prime_UTR
AAATAATACCAAACCAGCAA+TGG 0.572488 3_4:-67488076 None:intergenic
GAAGCTCGAAGAGTCTCTAA+GGG 0.574043 3_4:+67490776 Msa0516060:CDS
TAGAAAGAGAAACCACATGC+TGG 0.575276 3_4:+67485966 Msa0516060:CDS
TGTCCAAACTCTTTCAGAAG+TGG 0.576589 3_4:+67490593 Msa0516060:CDS
GCATTCTCACTGAAACAGCA+TGG 0.577149 3_4:+67484778 Msa0516060:CDS
CAATTCTGCCTTTATACACG+TGG 0.578979 3_4:-67486011 None:intergenic
AATAAAATTCTTGATCCGCA+GGG 0.579622 3_4:+67484045 Msa0516060:CDS
CAAGATGCATTGGCCAAGGA+AGG 0.579827 3_4:+67490816 Msa0516060:CDS
TATATTGTGGCACCTAGGCT+AGG 0.582126 3_4:-67490849 None:intergenic
GTCAACAACTACAAGATTGG+AGG 0.582200 3_4:+67489326 Msa0516060:CDS
GTGGAGAGGAGCTTCTCACA+TGG 0.586230 3_4:+67490523 Msa0516060:CDS
TTTGATCCGTAATCTTCCCA+AGG 0.586467 3_4:+67489479 Msa0516060:CDS
CCAACCTTCCCATCTCAACC+AGG 0.588199 3_4:+67490568 Msa0516060:CDS
AAAGAAGATTTCCCAAACAA+AGG 0.591284 3_4:-67488040 None:intergenic
CATTCTCACTGAAACAGCAT+GGG 0.591494 3_4:+67484779 Msa0516060:CDS
AATAGTGTAATCAATGGAGA+TGG 0.592879 3_4:+67491003 Msa0516060:exon
TATTCTTCCAATATGTGCCA+CGG 0.593988 3_4:+67484709 Msa0516060:CDS
TCTTCCCAAGGATTTAAGAA+GGG 0.597363 3_4:+67489491 Msa0516060:CDS
TGGCAAGAAATGTCTTTCAC+GGG 0.597393 3_4:+67484164 Msa0516060:CDS
CAGTCCTGGTTGAGATGGGA+AGG 0.601072 3_4:-67490572 None:intergenic
AGATTTATTATTACAAGACA+CGG 0.601642 3_4:+67483370 Msa0516060:five_prime_UTR
CTCAAGGCCGGTGACTTCTG+TGG 0.604437 3_4:+67490504 Msa0516060:CDS
GCTCCAAGATGCATTGGCCA+AGG 0.607396 3_4:+67490812 Msa0516060:CDS
GAAAGCTGCATTGTTCGCGA+AGG 0.608012 3_4:+67490387 Msa0516060:CDS
CTTCAACTCTGAATACCTCA+AGG 0.608292 3_4:+67490488 Msa0516060:CDS
GATGCATTGGCCAAGGAAGG+TGG 0.608847 3_4:+67490819 Msa0516060:CDS
GGTGGTAGTTCACCTAGCCT+AGG 0.609619 3_4:+67490837 Msa0516060:CDS
AGCATTTGCTCTAAAAGCTG+AGG 0.610634 3_4:+67490617 Msa0516060:CDS
ATTTCAGGACTGGAGTTCAG+AGG 0.612334 3_4:+67483840 Msa0516060:CDS
TCTTCCAAATACTCGAGAAG+AGG 0.612374 3_4:-67484286 None:intergenic
CTCGCAACAATGGCGTACAT+GGG 0.613114 3_4:+67490710 Msa0516060:CDS
ATAGATAGGATTGATGATGA+TGG 0.613942 3_4:-67483124 None:intergenic
GGCCGGTGACTTCTGTGGAG+AGG 0.614698 3_4:+67490509 Msa0516060:CDS
TAATTCACATTACGCAGTCA+GGG 0.616021 3_4:+67483878 Msa0516060:CDS
CCCTTCAATCTGGAGTTGTG+GGG 0.616232 3_4:+67486143 Msa0516060:CDS
TGGAGAGGAGCTTCTCACAT+GGG 0.618857 3_4:+67490524 Msa0516060:CDS
CTTCCAAATACTCGAGAAGA+GGG 0.620229 3_4:-67484285 None:intergenic
AAGCATATATTGTGGCACCT+AGG 0.625095 3_4:-67490854 None:intergenic
AGGATTGATGATGATGGTGA+AGG 0.625310 3_4:-67483118 None:intergenic
AAACCTTGAAGCATATATTG+TGG 0.626481 3_4:-67490862 None:intergenic
GTCGAAGCTGCTTACTGTGA+AGG 0.630397 3_4:-67490671 None:intergenic
AAAGGAGAGACGCAGAACAG+TGG 0.631752 3_4:+67489361 Msa0516060:CDS
CTCCTCTCCACAGAAGTCAC+CGG 0.635029 3_4:-67490511 None:intergenic
TCTTGCCATCATCAATCACA+GGG 0.639070 3_4:-67484149 None:intergenic
CAACCTGCATATTTCCAATG+AGG 0.643448 3_4:-67488104 None:intergenic
GGCTTCTGGAGCATCATGGG+AGG 0.643524 3_4:-67490951 None:intergenic
ACAGGGATATAAAAGAACAA+AGG 0.648329 3_4:-67484132 None:intergenic
GGAAGGTTGGATGCAGAACG+AGG 0.662339 3_4:-67490555 None:intergenic
TACAAATGGCAAGAAACTAG+AGG 0.662743 3_4:+67489441 Msa0516060:CDS
GTTTCAAGCAAGTTTCAAAG+GGG 0.669979 3_4:+67483925 Msa0516060:CDS
GTTTCATACAAGCAGCGTGG+AGG 0.671667 3_4:+67490739 Msa0516060:CDS
TATTTACAGAGAGATAGCGA+CGG 0.673370 3_4:-67483052 None:intergenic
ACTCGTGAATGAAACTGGTG+CGG 0.677451 3_4:+67491224 Msa0516060:three_prime_UTR
TGAATAACGGTACCATACAA+GGG 0.682148 3_4:+67491339 Msa0516060:three_prime_UTR
GAGATGCTCTTCATAATGCG+CGG 0.685033 3_4:+67490423 Msa0516060:CDS
AAATGGCTCAAGGAAGCCCA+GGG 0.688785 3_4:+67490914 Msa0516060:CDS
CATGTTTCATACAAGCAGCG+TGG 0.689166 3_4:+67490736 Msa0516060:CDS
TGTTTCAGTGAGAATGCCAG+AGG 0.703747 3_4:-67484772 None:intergenic
GATTCGAATCTAGTTCTGAG+AGG 0.710513 3_4:+67483947 Msa0516060:CDS
GGAGCTATTCGTATAAACCG+TGG 0.728285 3_4:-67484726 None:intergenic
TTGACCGTGACAACAAACGG+TGG 0.747129 3_4:+67490453 Msa0516060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTATTTTTAAATA+TGG + chr3_4:67484976-67484995 Msa0516060:intron 0.0%
!! ATAAAAATTAAATGAGAAAA+AGG - chr3_4:67483257-67483276 None:intergenic 10.0%
!!! TAAATAATTAAATTTAAGGT+AGG - chr3_4:67483484-67483503 None:intergenic 10.0%
!! CTTGTAAATAATTAAATTTA+AGG - chr3_4:67483488-67483507 None:intergenic 10.0%
!! ATGAATAATATAAAAAATGT+CGG - chr3_4:67484232-67484251 None:intergenic 10.0%
!!! AGAAATTTTTTTATTGTTTT+TGG + chr3_4:67486182-67486201 Msa0516060:CDS 10.0%
!!! TTTTTATGTATATTGTAATT+AGG - chr3_4:67486735-67486754 None:intergenic 10.0%
!! AAAAATATGGAAAATAAATA+AGG + chr3_4:67487193-67487212 Msa0516060:intron 10.0%
!! AAAATATGGAAAATAAATAA+GGG + chr3_4:67487194-67487213 Msa0516060:intron 10.0%
!! AAAGAAATAATTAATGTATT+TGG + chr3_4:67487226-67487245 Msa0516060:intron 10.0%
!! AAAGAGTTATTAATATTATA+TGG - chr3_4:67490262-67490281 None:intergenic 10.0%
!!! TAAAAACTAGTTTTTTTTTT+TGG + chr3_4:67491601-67491620 Msa0516060:three_prime_UTR 10.0%
!! GTTAAAAAATTAATCTACAA+GGG + chr3_4:67485329-67485348 Msa0516060:intron 15.0%
!! TTAAAAAATTAATCTACAAG+GGG + chr3_4:67485330-67485349 Msa0516060:intron 15.0%
!! AAAAAATACAACAATTATGA+AGG - chr3_4:67485786-67485805 None:intergenic 15.0%
!! AACAATAAAAAAATTTCTGT+GGG - chr3_4:67486180-67486199 None:intergenic 15.0%
!! AAACAATAAAAAAATTTCTG+TGG - chr3_4:67486181-67486200 None:intergenic 15.0%
!!! AATTTTTTTATTGTTTTTGG+TGG + chr3_4:67486185-67486204 Msa0516060:CDS 15.0%
!!! ATTTTTTTATTGTTTTTGGT+GGG + chr3_4:67486186-67486205 Msa0516060:CDS 15.0%
!! TCTTTATTAATATATGCTAT+TGG + chr3_4:67486240-67486259 Msa0516060:intron 15.0%
!! AGAAAATTATGATAATAATG+TGG + chr3_4:67486625-67486644 Msa0516060:intron 15.0%
!! ATAAAAATTCTTAGAATTTG+GGG - chr3_4:67487694-67487713 None:intergenic 15.0%
!! CATAAAAATTCTTAGAATTT+GGG - chr3_4:67487695-67487714 None:intergenic 15.0%
!! TTAACAAAAAAAAAAAACCT+GGG - chr3_4:67487801-67487820 None:intergenic 15.0%
!! TTTAACAAAAAAAAAAAACC+TGG - chr3_4:67487802-67487821 None:intergenic 15.0%
!! AACATTTAAAAAATACTATG+GGG - chr3_4:67487907-67487926 None:intergenic 15.0%
!! CAACATTTAAAAAATACTAT+GGG - chr3_4:67487908-67487927 None:intergenic 15.0%
!! TCAACATTTAAAAAATACTA+TGG - chr3_4:67487909-67487928 None:intergenic 15.0%
!!! AATAATAGAGTCTTATATTT+TGG + chr3_4:67488781-67488800 Msa0516060:intron 15.0%
!!! ATAATAGAGTCTTATATTTT+GGG + chr3_4:67488782-67488801 Msa0516060:intron 15.0%
!! GGAAAAAATAGAAATATTTA+TGG - chr3_4:67488990-67489009 None:intergenic 15.0%
!! TAATATATAATAAGTTGCAT+TGG + chr3_4:67489110-67489129 Msa0516060:intron 15.0%
!! AATGTCAATGTAAATAAATA+AGG - chr3_4:67489198-67489217 None:intergenic 15.0%
!!! TTTTAAACTTGTTTTAATAC+AGG + chr3_4:67489576-67489595 Msa0516060:intron 15.0%
!!! AATGTAATTTTCTATTTTGA+GGG - chr3_4:67489733-67489752 None:intergenic 15.0%
!! AGCATTTAATAGAATATATT+AGG + chr3_4:67489790-67489809 Msa0516060:intron 15.0%
!! AATTAGAATGAAATTATGAT+AGG + chr3_4:67491076-67491095 Msa0516060:three_prime_UTR 15.0%
!! AGGAATGAAATAAAAATCAA+CGG - chr3_4:67483237-67483256 None:intergenic 20.0%
!! AGATTTATTATTACAAGACA+CGG + chr3_4:67483370-67483389 Msa0516060:five_prime_UTR 20.0%
!!! TTCATCAAGATAAATTTGTT+AGG + chr3_4:67483441-67483460 Msa0516060:CDS 20.0%
!!! AGTATTTTAGTTATTGTCAA+TGG + chr3_4:67483506-67483525 Msa0516060:intron 20.0%
!! TTATATGATGTTTAGATTTC+AGG + chr3_4:67483825-67483844 Msa0516060:intron 20.0%
!! CTTTGTGAAAAAGATTTAAA+AGG - chr3_4:67483994-67484013 None:intergenic 20.0%
!!! ATAATTTTTCAATTTCGTAC+TGG + chr3_4:67484252-67484271 Msa0516060:CDS 20.0%
!! TGCAATAACTAACTAAATTA+AGG - chr3_4:67484424-67484443 None:intergenic 20.0%
!! ATTCATCATGTAATGTAAAT+AGG + chr3_4:67484480-67484499 Msa0516060:intron 20.0%
!!! TTTTTTATTTCCGAATTCAT+TGG + chr3_4:67484935-67484954 Msa0516060:intron 20.0%
!! GGTTAAAAAATTAATCTACA+AGG + chr3_4:67485328-67485347 Msa0516060:intron 20.0%
!! ATGAATTATATGATAACCTT+TGG + chr3_4:67485363-67485382 Msa0516060:intron 20.0%
!! AAATTCTACAAAGTTATAAG+AGG + chr3_4:67485387-67485406 Msa0516060:intron 20.0%
!! AAATCAGAAATTAGAAAGAT+AGG - chr3_4:67485903-67485922 None:intergenic 20.0%
!! TATAGAAAACAAATACCAAA+AGG - chr3_4:67485948-67485967 None:intergenic 20.0%
!!! TTTTTTTATTGTTTTTGGTG+GGG + chr3_4:67486187-67486206 Msa0516060:CDS 20.0%
!!! TTGTTGATTGAAGAAAAATA+TGG + chr3_4:67487180-67487199 Msa0516060:intron 20.0%
!! ATGTATTTGGAAATAACAAA+AGG + chr3_4:67487239-67487258 Msa0516060:intron 20.0%
!! TGTATTTGGAAATAACAAAA+GGG + chr3_4:67487240-67487259 Msa0516060:intron 20.0%
!!! TCAAAAGAGTCTTATAATTA+GGG + chr3_4:67487290-67487309 Msa0516060:intron 20.0%
!! TCAAAGATAGATCTAATATT+GGG + chr3_4:67487335-67487354 Msa0516060:intron 20.0%
!! TTGGAAAATTATGTTAATTG+TGG + chr3_4:67487408-67487427 Msa0516060:intron 20.0%
!! CCATAAAAATTCTTAGAATT+TGG - chr3_4:67487696-67487715 None:intergenic 20.0%
!!! CCAAATTCTAAGAATTTTTA+TGG + chr3_4:67487693-67487712 Msa0516060:intron 20.0%
!!! ACTTTTCTTTCTATGTTAAT+GGG - chr3_4:67487734-67487753 None:intergenic 20.0%
!!! TACTTTTCTTTCTATGTTAA+TGG - chr3_4:67487735-67487754 None:intergenic 20.0%
!! TTAACATAGAAAGAAAAGTA+AGG + chr3_4:67487735-67487754 Msa0516060:intron 20.0%
!! ACATTTAAAAAATACTATGG+GGG - chr3_4:67487906-67487925 None:intergenic 20.0%
!!! TTGTTGATTTTGGAATAAAT+TGG + chr3_4:67488189-67488208 Msa0516060:intron 20.0%
!!! ATTTAATTTGATTTTCCCTT+TGG + chr3_4:67488387-67488406 Msa0516060:intron 20.0%
!!! TTTAATTTGATTTTCCCTTT+GGG + chr3_4:67488388-67488407 Msa0516060:intron 20.0%
!!! TTTTTGTAATTCTCTATGTA+TGG + chr3_4:67488916-67488935 Msa0516060:intron 20.0%
!!! TTTTGTAATTCTCTATGTAT+GGG + chr3_4:67488917-67488936 Msa0516060:intron 20.0%
!! AATAGAAATATTTATGGAAG+TGG - chr3_4:67488984-67489003 None:intergenic 20.0%
!! AGATAATATCTCACAATTAT+AGG - chr3_4:67489157-67489176 None:intergenic 20.0%
!! AATGTAAATAAATAAGGAAC+AGG - chr3_4:67489192-67489211 None:intergenic 20.0%
!! TTAAAACAAGTTTAAAAGAC+AGG - chr3_4:67489573-67489592 None:intergenic 20.0%
!!! GAATGTAATTTTCTATTTTG+AGG - chr3_4:67489734-67489753 None:intergenic 20.0%
!! AATATAGATACACTAAAACA+GGG - chr3_4:67489756-67489775 None:intergenic 20.0%
!! AAATATAGATACACTAAAAC+AGG - chr3_4:67489757-67489776 None:intergenic 20.0%
!!! TAGTGTATCTATATTTTGTT+TGG + chr3_4:67489761-67489780 Msa0516060:intron 20.0%
!!! ATGATATTTTTAGTCCAAAA+TGG + chr3_4:67491297-67491316 Msa0516060:three_prime_UTR 20.0%
!! AACAAATGTCAAATGAATAA+CGG + chr3_4:67491326-67491345 Msa0516060:three_prime_UTR 20.0%
!! TAAAAGTGATAAACTGATAA+AGG - chr3_4:67491380-67491399 None:intergenic 20.0%
!!! TAGTGTCCTAATTTTTTTTT+TGG + chr3_4:67491624-67491643 Msa0516060:three_prime_UTR 20.0%
!! ACACTACCAAAAAAAAAATT+AGG - chr3_4:67491633-67491652 None:intergenic 20.0%
! GAAATAAGTGAAGTAATGTA+AGG - chr3_4:67483158-67483177 None:intergenic 25.0%
!! TTCACTTATTTCTCATGAAT+TGG + chr3_4:67483166-67483185 Msa0516060:five_prime_UTR 25.0%
! TAAAGTTTGACAAAGTCAAT+GGG - chr3_4:67483551-67483570 None:intergenic 25.0%
! ATAAAGTTTGACAAAGTCAA+TGG - chr3_4:67483552-67483571 None:intergenic 25.0%
!!! TTGTTCCATTTTTGAAGAAA+AGG - chr3_4:67484072-67484091 None:intergenic 25.0%
! ACACGTTATGATATTGATAT+TGG - chr3_4:67484454-67484473 None:intergenic 25.0%
! ATATCAATATCATAACGTGT+TGG + chr3_4:67484454-67484473 Msa0516060:intron 25.0%
! AACACTTAGGAAATTAAACA+TGG - chr3_4:67484530-67484549 None:intergenic 25.0%
! ATCTATGCATATAAACACTT+AGG - chr3_4:67484543-67484562 None:intergenic 25.0%
! CTATACTTAGTTACTTACAT+GGG + chr3_4:67484912-67484931 Msa0516060:intron 25.0%
! AGGAAAAATACCAATGAATT+CGG - chr3_4:67484948-67484967 None:intergenic 25.0%
! ATAAGACACTTATAATGAGA+CGG - chr3_4:67485196-67485215 None:intergenic 25.0%
! TGATACAGATAATAGTGTAT+TGG + chr3_4:67485222-67485241 Msa0516060:intron 25.0%
! TTAGTACTTGATACAGATAT+TGG + chr3_4:67485299-67485318 Msa0516060:intron 25.0%
! TGATACAGATATTGGAATAT+TGG + chr3_4:67485307-67485326 Msa0516060:intron 25.0%
! AACTTTGTAGAATTTACCAA+AGG - chr3_4:67485382-67485401 None:intergenic 25.0%
! CTTATTAGGAGATATAATGT+GGG - chr3_4:67485571-67485590 None:intergenic 25.0%
! TCTTATTAGGAGATATAATG+TGG - chr3_4:67485572-67485591 None:intergenic 25.0%
!!! TATATGTTGTTTCACATTCT+CGG + chr3_4:67485716-67485735 Msa0516060:intron 25.0%
! GGATTTAAATATGCTACATT+TGG - chr3_4:67485765-67485784 None:intergenic 25.0%
! TTTCTGATTTACTTCTTCAT+AGG + chr3_4:67485913-67485932 Msa0516060:intron 25.0%
! AAAAAATACCACGTGTATAA+AGG + chr3_4:67486003-67486022 Msa0516060:CDS 25.0%
!! TTTTATCTGGATTCTGTATT+GGG - chr3_4:67486093-67486112 None:intergenic 25.0%
!! TTTTTATCTGGATTCTGTAT+TGG - chr3_4:67486094-67486113 None:intergenic 25.0%
!! AAATCAAAGAGCTTTTTATC+TGG - chr3_4:67486106-67486125 None:intergenic 25.0%
!!! GATAAAAAGCTCTTTGATTT+TGG + chr3_4:67486106-67486125 Msa0516060:CDS 25.0%
!! CAATGTGTTTATGATTTTTG+TGG + chr3_4:67486293-67486312 Msa0516060:intron 25.0%
! TGTATATGTTCATGTTAACA+TGG + chr3_4:67486465-67486484 Msa0516060:intron 25.0%
! GTATATGTTCATGTTAACAT+GGG + chr3_4:67486466-67486485 Msa0516060:intron 25.0%
! AACTTGTGAAGGAAAAAAAA+GGG - chr3_4:67486534-67486553 None:intergenic 25.0%
! GATAATAATGTGGTAGAATT+TGG + chr3_4:67486635-67486654 Msa0516060:intron 25.0%
! TCTTAGCAATAATAAATCCA+AGG + chr3_4:67486685-67486704 Msa0516060:intron 25.0%
! ACGTTATAATTTAGTGTTGT+GGG + chr3_4:67486968-67486987 Msa0516060:intron 25.0%
! CATAAGTCCAAATTATAAGA+TGG + chr3_4:67487003-67487022 Msa0516060:intron 25.0%
! GGTAATACCATCTTATAATT+TGG - chr3_4:67487013-67487032 None:intergenic 25.0%
!! ATTCTCGTGATTTTATCAAA+AGG - chr3_4:67487056-67487075 None:intergenic 25.0%
!! GAAAATAAATAAGGGTATGT+TGG + chr3_4:67487202-67487221 Msa0516060:intron 25.0%
!! AACAAAAGGGTCTTATAAAA+AGG + chr3_4:67487253-67487272 Msa0516060:intron 25.0%
!! ACAAAAGGGTCTTATAAAAA+GGG + chr3_4:67487254-67487273 Msa0516060:intron 25.0%
!! CTCAAAAGAGTCTTATAATT+AGG + chr3_4:67487289-67487308 Msa0516060:intron 25.0%
! GTCAAAGATAGATCTAATAT+TGG + chr3_4:67487334-67487353 Msa0516060:intron 25.0%
! ATAGATATGACTTAAAGTAG+TGG + chr3_4:67487599-67487618 Msa0516060:intron 25.0%
! GTGAGTAAATTACATTCTTT+GGG + chr3_4:67487763-67487782 Msa0516060:intron 25.0%
! TGAGTAAATTACATTCTTTG+GGG + chr3_4:67487764-67487783 Msa0516060:intron 25.0%
!!! GGATTTTAAGTTTCCATATT+TGG - chr3_4:67487837-67487856 None:intergenic 25.0%
! CATTTAAAAAATACTATGGG+GGG - chr3_4:67487905-67487924 None:intergenic 25.0%
! CCAGCAAATATTAACAAAAA+GGG - chr3_4:67488248-67488267 None:intergenic 25.0%
! ACCAGCAAATATTAACAAAA+AGG - chr3_4:67488249-67488268 None:intergenic 25.0%
!! GACATGATCAAAATAAGTTT+TGG - chr3_4:67488366-67488385 None:intergenic 25.0%
!! GAAAAAGGACATCATATTTT+TGG + chr3_4:67488421-67488440 Msa0516060:intron 25.0%
!! TTTTGATATACTTATTGAGC+AGG + chr3_4:67488491-67488510 Msa0516060:intron 25.0%
! TTTGATATACTTATTGAGCA+GGG + chr3_4:67488492-67488511 Msa0516060:intron 25.0%
! AATATTTATGGAAGTGGAAA+AGG - chr3_4:67488978-67488997 None:intergenic 25.0%
! AGAATAACCCAATAATAGAA+TGG - chr3_4:67489250-67489269 None:intergenic 25.0%
! AGTTTAAAAGACAGGAAATA+TGG - chr3_4:67489565-67489584 None:intergenic 25.0%
!!! TGTATCTATATTTTGTTTGG+TGG + chr3_4:67489764-67489783 Msa0516060:intron 25.0%
! GGTGTACGTTTAAAAAAAAA+AGG + chr3_4:67489859-67489878 Msa0516060:intron 25.0%
! TTGCATTCAAATATATGCTA+CGG - chr3_4:67489935-67489954 None:intergenic 25.0%
! CTGTAAGAAAAGAAAAGAAA+TGG + chr3_4:67491036-67491055 Msa0516060:three_prime_UTR 25.0%
! AAATAACAAAACTGACATCT+TGG - chr3_4:67491106-67491125 None:intergenic 25.0%
! ACTAAAAATATCATCACCAT+CGG - chr3_4:67491291-67491310 None:intergenic 25.0%
!!! TCAGTTTATCACTTTTACAT+TGG + chr3_4:67491383-67491402 Msa0516060:three_prime_UTR 25.0%
!! ATAGATAGGATTGATGATGA+TGG - chr3_4:67483127-67483146 None:intergenic 30.0%
! GTAAGGAAAAAAGCATAGAT+AGG - chr3_4:67483141-67483160 None:intergenic 30.0%
AAATGAATGAGAATAATGCG+AGG - chr3_4:67483207-67483226 None:intergenic 30.0%
!! AATCTCTATTGACTTGTTGT+AGG + chr3_4:67483311-67483330 Msa0516060:intron 30.0%
TTGAATGTAATCACATGTGT+CGG - chr3_4:67483643-67483662 None:intergenic 30.0%
AGTTTCAAGCAAGTTTCAAA+GGG + chr3_4:67483924-67483943 Msa0516060:CDS 30.0%
AAATAAAATTCTTGATCCGC+AGG + chr3_4:67484044-67484063 Msa0516060:CDS 30.0%
AATAAAATTCTTGATCCGCA+GGG + chr3_4:67484045-67484064 Msa0516060:CDS 30.0%
ACAGGGATATAAAAGAACAA+AGG - chr3_4:67484135-67484154 None:intergenic 30.0%
GGACAAAAAAATGGAAACTA+CGG + chr3_4:67484185-67484204 Msa0516060:CDS 30.0%
CTTAGGAAATTAAACATGGA+GGG - chr3_4:67484526-67484545 None:intergenic 30.0%
ACTTAGGAAATTAAACATGG+AGG - chr3_4:67484527-67484546 None:intergenic 30.0%
AATAGCTCCACTATATAAAG+AGG + chr3_4:67484740-67484759 Msa0516060:CDS 30.0%
CTTGTAACCTCTTTATATAG+TGG - chr3_4:67484750-67484769 None:intergenic 30.0%
CACTATATAAAGAGGTTACA+AGG + chr3_4:67484748-67484767 Msa0516060:CDS 30.0%
GCTATACTTAGTTACTTACA+TGG + chr3_4:67484911-67484930 Msa0516060:intron 30.0%
TTGAAGCGTATCTAATATTG+CGG + chr3_4:67485007-67485026 Msa0516060:intron 30.0%
ACTTGTTTAATCTAGTGATC+AGG - chr3_4:67485067-67485086 None:intergenic 30.0%
ACCACAAGAGAAAATATATG+TGG - chr3_4:67485102-67485121 None:intergenic 30.0%
CTGTATCAAGTACTAAAATC+AGG - chr3_4:67485295-67485314 None:intergenic 30.0%
TTCTACAAAGTTATAAGAGG+CGG + chr3_4:67485390-67485409 Msa0516060:intron 30.0%
CGCAAACGCTTAAAAATTAA+AGG + chr3_4:67485614-67485633 Msa0516060:intron 30.0%
!! ATATGTTGTTTCACATTCTC+GGG + chr3_4:67485717-67485736 Msa0516060:intron 30.0%
TTTACTTCTTCATAGGTTCT+TGG + chr3_4:67485920-67485939 Msa0516060:intron 30.0%
TTGTATTGTGATGATCATCA+TGG + chr3_4:67486031-67486050 Msa0516060:CDS 30.0%
AAGCAAACCTCAAATTCTTT+AGG - chr3_4:67486213-67486232 None:intergenic 30.0%
TTCACATCAACTTAGTAAAG+TGG - chr3_4:67486319-67486338 None:intergenic 30.0%
! AAAGAAGAGGAAAATGGTTT+TGG + chr3_4:67486365-67486384 Msa0516060:intron 30.0%
TCAACCAGGAATTATATTCT+TGG + chr3_4:67486497-67486516 Msa0516060:intron 30.0%
CAACCAGGAATTATATTCTT+GGG + chr3_4:67486498-67486517 Msa0516060:intron 30.0%
ATTCCCAAGAATATAATTCC+TGG - chr3_4:67486504-67486523 None:intergenic 30.0%
GAACTTGTGAAGGAAAAAAA+AGG - chr3_4:67486535-67486554 None:intergenic 30.0%
TATGTGAATTGAACTTGTGA+AGG - chr3_4:67486545-67486564 None:intergenic 30.0%
AATAATGTGGTAGAATTTGG+TGG + chr3_4:67486638-67486657 Msa0516060:intron 30.0%
TAGCAATAATAAATCCAAGG+AGG + chr3_4:67486688-67486707 Msa0516060:intron 30.0%
AAAGTAACTTCTATTCCTCT+TGG + chr3_4:67486784-67486803 Msa0516060:intron 30.0%
ATCAAAAGTTGACGCAATTA+AGG - chr3_4:67486843-67486862 None:intergenic 30.0%
CACGTTATAATTTAGTGTTG+TGG + chr3_4:67486967-67486986 Msa0516060:intron 30.0%
CGTTATAATTTAGTGTTGTG+GGG + chr3_4:67486969-67486988 Msa0516060:intron 30.0%
TCAAAAGGCTCTTATAATCA+GGG - chr3_4:67487041-67487060 None:intergenic 30.0%
ATCAAAAGGCTCTTATAATC+AGG - chr3_4:67487042-67487061 None:intergenic 30.0%
AAACAAACTCTGTCTCTTAA+AGG - chr3_4:67487139-67487158 None:intergenic 30.0%
! AAGAGTCTTATAATTAGGGA+TGG + chr3_4:67487294-67487313 Msa0516060:intron 30.0%
TAGGAGTTGTAATTAAGGAA+AGG - chr3_4:67487472-67487491 None:intergenic 30.0%
GTCATATCTATAGACAATGT+TGG - chr3_4:67487590-67487609 None:intergenic 30.0%
CGTGAGTAAATTACATTCTT+TGG + chr3_4:67487762-67487781 Msa0516060:intron 30.0%
AGAAACACTTGAACCAAATA+TGG + chr3_4:67487821-67487840 Msa0516060:intron 30.0%
TATGGAAACTTAAAATCCCA+AGG + chr3_4:67487839-67487858 Msa0516060:intron 30.0%
ATGCAAAAATATTCCCAGAA+AGG - chr3_4:67487868-67487887 None:intergenic 30.0%
AAGAATGTTAGACAGTAACT+TGG - chr3_4:67487947-67487966 None:intergenic 30.0%
AAAGAAGATTTCCCAAACAA+AGG - chr3_4:67488043-67488062 None:intergenic 30.0%
AAATAATACCAAACCAGCAA+TGG - chr3_4:67488079-67488098 None:intergenic 30.0%
GTATTATTTGCATTCCTCAT+TGG + chr3_4:67488090-67488109 Msa0516060:CDS 30.0%
AATCAGACAATAATTCAAGC+TGG + chr3_4:67488160-67488179 Msa0516060:intron 30.0%
!!! CTGGTACTATTTGTTGATTT+TGG + chr3_4:67488179-67488198 Msa0516060:intron 30.0%
TCAGGAGGAATATATAATAC+TGG - chr3_4:67488218-67488237 None:intergenic 30.0%
! CCCTTTTTGTTAATATTTGC+TGG + chr3_4:67488245-67488264 Msa0516060:intron 30.0%
!!! CTGGTTTTATGTCTTTCTTT+TGG + chr3_4:67488264-67488283 Msa0516060:intron 30.0%
! AAATATCAGTATGCGCTTTT+AGG + chr3_4:67488600-67488619 Msa0516060:intron 30.0%
!!! GTATGCATTTTTTCCTTAGA+AGG - chr3_4:67488808-67488827 None:intergenic 30.0%
CTTAATAAACACGAATTCAC+TGG - chr3_4:67488896-67488915 None:intergenic 30.0%
!! GAACGACTAATATTTTGAGA+CGG - chr3_4:67489021-67489040 None:intergenic 30.0%
TTGAAAAATAGTTTGACACC+CGG + chr3_4:67489223-67489242 Msa0516060:intron 30.0%
!! TATGATGGATCAAATTGTTG+AGG - chr3_4:67489273-67489292 None:intergenic 30.0%
GGAAGAAAAATGAAGTATGA+TGG - chr3_4:67489288-67489307 None:intergenic 30.0%
! GACTGTAAATATGTCTGTTT+TGG - chr3_4:67489309-67489328 None:intergenic 30.0%
TTAAATCCTTGGGAAGATTA+CGG - chr3_4:67489488-67489507 None:intergenic 30.0%
TTATCTATCTGCGATTATAG+TGG + chr3_4:67489660-67489679 Msa0516060:intron 30.0%
!! ATCTATATTTTGTTTGGTGG+TGG + chr3_4:67489767-67489786 Msa0516060:intron 30.0%
TGCACAAACCTAACAAATAT+TGG + chr3_4:67489837-67489856 Msa0516060:intron 30.0%
GCACAAACCTAACAAATATT+GGG + chr3_4:67489838-67489857 Msa0516060:intron 30.0%
GATCAGCACTAATTCAAAAA+AGG - chr3_4:67490017-67490036 None:intergenic 30.0%
ATGGGAATTCAAAATACGAT+TGG + chr3_4:67490165-67490184 Msa0516060:intron 30.0%
TCATCCATCTTCTCAAATAT+TGG - chr3_4:67490315-67490334 None:intergenic 30.0%
!! AGTTTGTTGCATCTCAATTT+CGG + chr3_4:67490646-67490665 Msa0516060:CDS 30.0%
AAACCTTGAAGCATATATTG+TGG - chr3_4:67490865-67490884 None:intergenic 30.0%
AAGAGCAATAGTGTAATCAA+TGG + chr3_4:67490997-67491016 Msa0516060:exon 30.0%
AATAGTGTAATCAATGGAGA+TGG + chr3_4:67491003-67491022 Msa0516060:exon 30.0%
! TTTTCTTTTCTTACAGCACA+AGG - chr3_4:67491032-67491051 None:intergenic 30.0%
! CATTTGTTCTAGTACCATTT+TGG - chr3_4:67491314-67491333 None:intergenic 30.0%
! GTATTGTATTTTGTTGCCTA+GGG - chr3_4:67491576-67491595 None:intergenic 30.0%
! TGTATTGTATTTTGTTGCCT+AGG - chr3_4:67491577-67491596 None:intergenic 30.0%
TATTTACAGAGAGATAGCGA+CGG - chr3_4:67483055-67483074 None:intergenic 35.0%
AAGAATTGAAGTGGAAGAGA+AGG - chr3_4:67483095-67483114 None:intergenic 35.0%
TGAAGGAAGAAGAATTGAAG+TGG - chr3_4:67483104-67483123 None:intergenic 35.0%
! TTTTGACAGGTTCATGAAGA+AGG + chr3_4:67483334-67483353 Msa0516060:five_prime_UTR 35.0%
GTATCAACATTTCTGATCGA+AGG + chr3_4:67483580-67483599 Msa0516060:intron 35.0%
TCAGTCCATGATAAACCATT+CGG - chr3_4:67483787-67483806 None:intergenic 35.0%
TGATGTTTAGATTTCAGGAC+TGG + chr3_4:67483830-67483849 Msa0516060:intron 35.0%
TGCGTAATGTGAATTATTCC+GGG - chr3_4:67483874-67483893 None:intergenic 35.0%
CTGCGTAATGTGAATTATTC+CGG - chr3_4:67483875-67483894 None:intergenic 35.0%
ATAATTCACATTACGCAGTC+AGG + chr3_4:67483877-67483896 Msa0516060:CDS 35.0%
TAATTCACATTACGCAGTCA+GGG + chr3_4:67483878-67483897 Msa0516060:CDS 35.0%
CAGTTTCAAGCAAGTTTCAA+AGG + chr3_4:67483923-67483942 Msa0516060:CDS 35.0%
GTTTCAAGCAAGTTTCAAAG+GGG + chr3_4:67483925-67483944 Msa0516060:CDS 35.0%
!! ATCTAGTTCTGAGAGGATAA+AGG + chr3_4:67483954-67483973 Msa0516060:CDS 35.0%
!! TCTAGTTCTGAGAGGATAAA+GGG + chr3_4:67483955-67483974 Msa0516060:CDS 35.0%
! AGGGTCCTTTTCTTCAAAAA+TGG + chr3_4:67484064-67484083 Msa0516060:CDS 35.0%
TATATCCCTGTGATTGATGA+TGG + chr3_4:67484144-67484163 Msa0516060:CDS 35.0%
ATGGCAAGAAATGTCTTTCA+CGG + chr3_4:67484163-67484182 Msa0516060:CDS 35.0%
TCTTTCACGGGACAAAAAAA+TGG + chr3_4:67484176-67484195 Msa0516060:CDS 35.0%
! AAACTACGGCAACTGTTTTA+AGG + chr3_4:67484199-67484218 Msa0516060:CDS 35.0%
GGCAATAGCAAAGAGATATA+TGG + chr3_4:67484332-67484351 Msa0516060:CDS 35.0%
GATTCAGAAGTTTACACGAT+TGG + chr3_4:67484560-67484579 Msa0516060:intron 35.0%
TTTATCATTCCGAAGATGAC+AGG + chr3_4:67484645-67484664 Msa0516060:CDS 35.0%
TATTCTTCCAATATGTGCCA+CGG + chr3_4:67484709-67484728 Msa0516060:CDS 35.0%
! GCCACATATATTTTCTCTTG+TGG + chr3_4:67485098-67485117 Msa0516060:intron 35.0%
! AAAGTTATAAGAGGCGGATT+GGG + chr3_4:67485396-67485415 Msa0516060:intron 35.0%
TGTTGTCATCTGCAAAGAAA+AGG - chr3_4:67485471-67485490 None:intergenic 35.0%
TCAGCTCGTTAGACATAATT+AGG - chr3_4:67485533-67485552 None:intergenic 35.0%
CCTTCAGCAAGATTCTTATT+AGG - chr3_4:67485585-67485604 None:intergenic 35.0%
CCTAATAAGAATCTTGCTGA+AGG + chr3_4:67485582-67485601 Msa0516060:intron 35.0%
!! ATTTTTAAGCGTTTGCGTCA+TGG - chr3_4:67485611-67485630 None:intergenic 35.0%
TGCTTAATATGTGTATCTGC+GGG - chr3_4:67485683-67485702 None:intergenic 35.0%
GTGCTTAATATGTGTATCTG+CGG - chr3_4:67485684-67485703 None:intergenic 35.0%
TTCTTTGAACCAAGTCACAA+TGG - chr3_4:67486351-67486370 None:intergenic 35.0%
TGGTTCAAAGAAGAGGAAAA+TGG + chr3_4:67486359-67486378 Msa0516060:intron 35.0%
TTATTGTATCAAAGCCTCCT+TGG - chr3_4:67486705-67486724 None:intergenic 35.0%
TTGGAAAGCCACCTTAATTA+CGG + chr3_4:67486803-67486822 Msa0516060:intron 35.0%
TATAACGTGAGAAATGACTG+AGG - chr3_4:67486956-67486975 None:intergenic 35.0%
! AGTCTTATAATTAGGGATGG+AGG + chr3_4:67487297-67487316 Msa0516060:intron 35.0%
TCTTAGATCACGTAGAGATA+TGG + chr3_4:67487531-67487550 Msa0516060:intron 35.0%
GACTTAAAGTAGTGGTTATG+AGG + chr3_4:67487607-67487626 Msa0516060:intron 35.0%
! ATTCTTAGAATTTGGGGTTG+AGG - chr3_4:67487688-67487707 None:intergenic 35.0%
CCAAGAGAACTGCAATAAAA+AGG - chr3_4:67488000-67488019 None:intergenic 35.0%
! CCTTTTTATTGCAGTTCTCT+TGG + chr3_4:67487997-67488016 Msa0516060:intron 35.0%
! GCAATTTTCATTTCCATTGC+TGG + chr3_4:67488063-67488082 Msa0516060:CDS 35.0%
! TTTCATTTCCATTGCTGGTT+TGG + chr3_4:67488068-67488087 Msa0516060:CDS 35.0%
ATTCCTCATTGGAAATATGC+AGG + chr3_4:67488101-67488120 Msa0516060:CDS 35.0%
! AGTTTAAGACACACTAGCAA+AGG - chr3_4:67488631-67488650 None:intergenic 35.0%
TTGCTAGTGTGTCTTAAACT+AGG + chr3_4:67488631-67488650 Msa0516060:intron 35.0%
TGCTAGTGTGTCTTAAACTA+GGG + chr3_4:67488632-67488651 Msa0516060:intron 35.0%
ATCTTGTGGTATTATGACCT+GGG + chr3_4:67488751-67488770 Msa0516060:intron 35.0%
CTCTATTATTACAACATCCC+AGG - chr3_4:67488771-67488790 None:intergenic 35.0%
!! CTTATATTTTGGGCCTTCTA+AGG + chr3_4:67488792-67488811 Msa0516060:intron 35.0%
TGCAAGTGTTTCCTAGAATA+GGG + chr3_4:67488866-67488885 Msa0516060:intron 35.0%
TATGGAAGTGGAAAAGGAAT+AGG - chr3_4:67488972-67488991 None:intergenic 35.0%
!!! GACTAATATTTTGAGACGGA+GGG - chr3_4:67489017-67489036 None:intergenic 35.0%
AACCCAATAATAGAATGGTC+CGG - chr3_4:67489245-67489264 None:intergenic 35.0%
ACAGTCAACAACTACAAGAT+TGG + chr3_4:67489323-67489342 Msa0516060:CDS 35.0%
TACAAATGGCAAGAAACTAG+AGG + chr3_4:67489441-67489460 Msa0516060:CDS 35.0%
ATCTTCCCAAGGATTTAAGA+AGG + chr3_4:67489490-67489509 Msa0516060:CDS 35.0%
TCTTCCCAAGGATTTAAGAA+GGG + chr3_4:67489491-67489510 Msa0516060:CDS 35.0%
ATGTCCCTTCTTAAATCCTT+GGG - chr3_4:67489498-67489517 None:intergenic 35.0%
AATGTCCCTTCTTAAATCCT+TGG - chr3_4:67489499-67489518 None:intergenic 35.0%
ACGTACACCCAATATTTGTT+AGG - chr3_4:67489848-67489867 None:intergenic 35.0%
CATGTTCAAACAAATGACGT+GGG - chr3_4:67489974-67489993 None:intergenic 35.0%
ACATGTTCAAACAAATGACG+TGG - chr3_4:67489975-67489994 None:intergenic 35.0%
!! GTGCTGATCATGTTTTTAAC+TGG + chr3_4:67490028-67490047 Msa0516060:intron 35.0%
!! CTGATCATGTTTTTAACTGG+TGG + chr3_4:67490031-67490050 Msa0516060:intron 35.0%
!!! GGTGATTGGCTTATTTTTCA+AGG - chr3_4:67490202-67490221 None:intergenic 35.0%
TTCAAAGCTTCCAATAGCAA+CGG - chr3_4:67490223-67490242 None:intergenic 35.0%
TCTTTCTTGAACGAGATTTC+AGG + chr3_4:67490287-67490306 Msa0516060:intron 35.0%
CTTTCTTTCGTGTAAAGTAC+TGG - chr3_4:67490372-67490391 None:intergenic 35.0%
! TCAGATTTTACTCGCAACAA+TGG + chr3_4:67490700-67490719 Msa0516060:CDS 35.0%
TTCAGCAGTAAAATCTGGTT+CGG - chr3_4:67490979-67490998 None:intergenic 35.0%
! TTTTCACTCGTGAATGAAAC+TGG + chr3_4:67491219-67491238 Msa0516060:three_prime_UTR 35.0%
ATGAATAACGGTACCATACA+AGG + chr3_4:67491338-67491357 Msa0516060:three_prime_UTR 35.0%
TGAATAACGGTACCATACAA+GGG + chr3_4:67491339-67491358 Msa0516060:three_prime_UTR 35.0%
ACCATACAAGGGAAGAAATT+CGG + chr3_4:67491350-67491369 Msa0516060:three_prime_UTR 35.0%
CAAACAGATATTGTAACCCT+AGG + chr3_4:67491557-67491576 Msa0516060:three_prime_UTR 35.0%
!! AGGATTGATGATGATGGTGA+AGG - chr3_4:67483121-67483140 None:intergenic 40.0%
TAATGCGAGGAGTTATGAGA+AGG - chr3_4:67483194-67483213 None:intergenic 40.0%
!!! GACTTGTTGTAGGTTTTGAC+AGG + chr3_4:67483321-67483340 Msa0516060:intron 40.0%
TGTCTGTCTCAATGCTTCAT+AGG + chr3_4:67483720-67483739 Msa0516060:intron 40.0%
GACACATTCGAACACAAATG+TGG - chr3_4:67483760-67483779 None:intergenic 40.0%
CTTCACCGAATGGTTTATCA+TGG + chr3_4:67483779-67483798 Msa0516060:intron 40.0%
!! GATTCGAATCTAGTTCTGAG+AGG + chr3_4:67483947-67483966 Msa0516060:CDS 40.0%
!! TTTTGAAGAAAAGGACCCTG+CGG - chr3_4:67484063-67484082 None:intergenic 40.0%
TCTTGCCATCATCAATCACA+GGG - chr3_4:67484152-67484171 None:intergenic 40.0%
TTCTTGCCATCATCAATCAC+AGG - chr3_4:67484153-67484172 None:intergenic 40.0%
TGGCAAGAAATGTCTTTCAC+GGG + chr3_4:67484164-67484183 Msa0516060:CDS 40.0%
CTTCCAAATACTCGAGAAGA+GGG - chr3_4:67484288-67484307 None:intergenic 40.0%
TCTTCCAAATACTCGAGAAG+AGG - chr3_4:67484289-67484308 None:intergenic 40.0%
TCTTCTCGAGTATTTGGAAG+AGG + chr3_4:67484288-67484307 Msa0516060:CDS 40.0%
! AGTATTTGGAAGAGGTGTGT+TGG + chr3_4:67484296-67484315 Msa0516060:CDS 40.0%
!! TGTGTTGGTTCAAGATGCTT+GGG + chr3_4:67484311-67484330 Msa0516060:CDS 40.0%
AAACTCGCTCTTACATTGCT+AGG + chr3_4:67484611-67484630 Msa0516060:intron 40.0%
GTATAAACCGTGGCACATAT+TGG - chr3_4:67484719-67484738 None:intergenic 40.0%
CATTCTCACTGAAACAGCAT+GGG + chr3_4:67484779-67484798 Msa0516060:CDS 40.0%
TTTCTCTTGTGGTGACTATG+TGG + chr3_4:67485109-67485128 Msa0516060:intron 40.0%
GACACTTATAATGAGACGGA+GGG - chr3_4:67485192-67485211 None:intergenic 40.0%
AGACACTTATAATGAGACGG+AGG - chr3_4:67485193-67485212 None:intergenic 40.0%
CAAAGTTATAAGAGGCGGAT+TGG + chr3_4:67485395-67485414 Msa0516060:intron 40.0%
TAAAGGAGTTGTGCCTTCAT+TGG + chr3_4:67485631-67485650 Msa0516060:intron 40.0%
TCTAGCGATATGTCCAATGA+AGG - chr3_4:67485647-67485666 None:intergenic 40.0%
GGAACCAACATAAAATGACG+TGG - chr3_4:67485744-67485763 None:intergenic 40.0%
TAGAAAGAGAAACCACATGC+TGG + chr3_4:67485966-67485985 Msa0516060:CDS 40.0%
CAATTCTGCCTTTATACACG+TGG - chr3_4:67486014-67486033 None:intergenic 40.0%
!! TGTGACTTGGTTCAAAGAAG+AGG + chr3_4:67486352-67486371 Msa0516060:intron 40.0%
! AATTTTCCCTCTTCTTGAGG+CGG - chr3_4:67486412-67486431 None:intergenic 40.0%
CCTCAAGAAGAGGGAAAATT+GGG + chr3_4:67486412-67486431 Msa0516060:intron 40.0%
CTCAAGAAGAGGGAAAATTG+GGG + chr3_4:67486413-67486432 Msa0516060:intron 40.0%
TCAAGAAGAGGGAAAATTGG+GGG + chr3_4:67486414-67486433 Msa0516060:intron 40.0%
AATTAAGGTGGCTTTCCAAG+AGG - chr3_4:67486802-67486821 None:intergenic 40.0%
CTTGAGACACACCGTAATTA+AGG - chr3_4:67486817-67486836 None:intergenic 40.0%
AAGGCTCTTATAATCAGGGA+AGG - chr3_4:67487037-67487056 None:intergenic 40.0%
CAAAATTTCCGCAAGTAAGG+CGG - chr3_4:67487445-67487464 None:intergenic 40.0%
AGCCAAAATTTCCGCAAGTA+AGG - chr3_4:67487448-67487467 None:intergenic 40.0%
GGAGCTAGGAGTTGTAATTA+AGG - chr3_4:67487477-67487496 None:intergenic 40.0%
CTTCATTGTGTTGAGTGTGA+GGG + chr3_4:67487496-67487515 Msa0516060:intron 40.0%
TTCATTGTGTTGAGTGTGAG+GGG + chr3_4:67487497-67487516 Msa0516060:intron 40.0%
! ACTAGCTTGTAAGGTGAACT+CGG - chr3_4:67487647-67487666 None:intergenic 40.0%
! ACCTTACAAGCTAGTTTGTG+AGG + chr3_4:67487652-67487671 Msa0516060:intron 40.0%
! CTAGTTTGTGAGGCTGAATT+AGG + chr3_4:67487662-67487681 Msa0516060:intron 40.0%
TTGGGGAATCAATAATACCC+AGG + chr3_4:67487781-67487800 Msa0516060:intron 40.0%
!! AAACAAAGGTACTTGTTGCC+AGG - chr3_4:67488029-67488048 None:intergenic 40.0%
TGGCAACAAGTACCTTTGTT+TGG + chr3_4:67488028-67488047 Msa0516060:CDS 40.0%
! GGCAACAAGTACCTTTGTTT+GGG + chr3_4:67488029-67488048 Msa0516060:CDS 40.0%
CAACCTGCATATTTCCAATG+AGG - chr3_4:67488107-67488126 None:intergenic 40.0%
CTCATTGGAAATATGCAGGT+TGG + chr3_4:67488105-67488124 Msa0516060:intron 40.0%
AACAAAAAGGGACAGATCTC+AGG - chr3_4:67488236-67488255 None:intergenic 40.0%
TTTCTTGAGAGTCTCCCAAA+GGG - chr3_4:67488405-67488424 None:intergenic 40.0%
! TTTTCTTGAGAGTCTCCCAA+AGG - chr3_4:67488406-67488425 None:intergenic 40.0%
TTGGGAGACTCTCAAGAAAA+AGG + chr3_4:67488406-67488425 Msa0516060:intron 40.0%
TTTAGGTCTCACCCATCATT+GGG - chr3_4:67488523-67488542 None:intergenic 40.0%
!! TTTTAGGTCTCACCCATCAT+TGG - chr3_4:67488524-67488543 None:intergenic 40.0%
!! GACCTAAAACTAGCTTTGAG+AGG + chr3_4:67488535-67488554 Msa0516060:intron 40.0%
!!! CTCCTCTCAAAGCTAGTTTT+AGG - chr3_4:67488540-67488559 None:intergenic 40.0%
!! AAACTAGCTTTGAGAGGAGT+TGG + chr3_4:67488541-67488560 Msa0516060:intron 40.0%
!! AACTAGCTTTGAGAGGAGTT+GGG + chr3_4:67488542-67488561 Msa0516060:intron 40.0%
AGCAAAAAGACCACACATGA+TGG - chr3_4:67488576-67488595 None:intergenic 40.0%
CAAAAAGAGGACCAACACAA+GGG - chr3_4:67488672-67488691 None:intergenic 40.0%
!! CTTGTGTTGGTCCTCTTTTT+GGG + chr3_4:67488671-67488690 Msa0516060:intron 40.0%
!! TTGTGTTGGTCCTCTTTTTG+GGG + chr3_4:67488672-67488691 Msa0516060:intron 40.0%
! CTCTCGTGGAACTATTTTCT+GGG + chr3_4:67488708-67488727 Msa0516060:intron 40.0%
! TCTCGTGGAACTATTTTCTG+GGG + chr3_4:67488709-67488728 Msa0516060:intron 40.0%
GATCTTGTGGTATTATGACC+TGG + chr3_4:67488750-67488769 Msa0516060:intron 40.0%
! ATTCTAGGAAACACTTGCAG+AGG - chr3_4:67488865-67488884 None:intergenic 40.0%
CTGCAAGTGTTTCCTAGAAT+AGG + chr3_4:67488865-67488884 Msa0516060:intron 40.0%
!!! CGACTAATATTTTGAGACGG+AGG - chr3_4:67489018-67489037 None:intergenic 40.0%
ACCCGGACCATTCTATTATT+GGG + chr3_4:67489240-67489259 Msa0516060:intron 40.0%
ACCCAATAATAGAATGGTCC+GGG - chr3_4:67489244-67489263 None:intergenic 40.0%
GTCAACAACTACAAGATTGG+AGG + chr3_4:67489326-67489345 Msa0516060:CDS 40.0%
TTCTTTCTCTCAAGTGGTCA+GGG - chr3_4:67489404-67489423 None:intergenic 40.0%
ATTCTTTCTCTCAAGTGGTC+AGG - chr3_4:67489405-67489424 None:intergenic 40.0%
GTCTGATTCTTTCTCTCAAG+TGG - chr3_4:67489410-67489429 None:intergenic 40.0%
GACGACATGAGCAATACAAA+TGG + chr3_4:67489427-67489446 Msa0516060:CDS 40.0%
TTTGATCCGTAATCTTCCCA+AGG + chr3_4:67489479-67489498 Msa0516060:CDS 40.0%
AATTCCCATGATTCTTCACC+AGG - chr3_4:67490154-67490173 None:intergenic 40.0%
GGTGCCAATATTTGAGAAGA+TGG + chr3_4:67490308-67490327 Msa0516060:intron 40.0%
! GAAGATGGATGAGCAACTTT+TGG + chr3_4:67490323-67490342 Msa0516060:CDS 40.0%
!! ATGAAGAGCATCTCATCAAC+AGG - chr3_4:67490417-67490436 None:intergenic 40.0%
TTGTTGACCGTGACAACAAA+CGG + chr3_4:67490450-67490469 Msa0516060:CDS 40.0%
CTTCAACTCTGAATACCTCA+AGG + chr3_4:67490488-67490507 Msa0516060:CDS 40.0%
TGTCCAAACTCTTTCAGAAG+TGG + chr3_4:67490593-67490612 Msa0516060:CDS 40.0%
! CTTCCACTTCTGAAAGAGTT+TGG - chr3_4:67490599-67490618 None:intergenic 40.0%
!! AGCATTTGCTCTAAAAGCTG+AGG + chr3_4:67490617-67490636 Msa0516060:CDS 40.0%
AAGCATATATTGTGGCACCT+AGG - chr3_4:67490857-67490876 None:intergenic 40.0%
GTGCCACAATATATGCTTCA+AGG + chr3_4:67490859-67490878 Msa0516060:CDS 40.0%
! CATTTTTACGTATGGCTCGA+AGG - chr3_4:67490899-67490918 None:intergenic 40.0%
CTTCGAGCCATACGTAAAAA+TGG + chr3_4:67490897-67490916 Msa0516060:CDS 40.0%
!!! CCTTGAGCCATTTTTACGTA+TGG - chr3_4:67490907-67490926 None:intergenic 40.0%
CCATACGTAAAAATGGCTCA+AGG + chr3_4:67490904-67490923 Msa0516060:CDS 40.0%
TGCTCTTCAGCAGTAAAATC+TGG - chr3_4:67490984-67491003 None:intergenic 40.0%
!! CTGTTTTTCGCACTTTGTGA+TGG + chr3_4:67491265-67491284 Msa0516060:three_prime_UTR 40.0%
CCATACAAGGGAAGAAATTC+GGG + chr3_4:67491351-67491370 Msa0516060:three_prime_UTR 40.0%
TGTGTCTATGTCTTCGGACA+CGG - chr3_4:67483611-67483630 None:intergenic 45.0%
CGTGTGTGTGTCTATGTCTT+CGG - chr3_4:67483617-67483636 None:intergenic 45.0%
TCGAATGTGTCTTCACCGAA+TGG + chr3_4:67483769-67483788 Msa0516060:intron 45.0%
ATTTCAGGACTGGAGTTCAG+AGG + chr3_4:67483840-67483859 Msa0516060:CDS 45.0%
AGTTCAGAGGTTAACTCTCC+CGG + chr3_4:67483853-67483872 Msa0516060:CDS 45.0%
!! GTGTGTTGGTTCAAGATGCT+TGG + chr3_4:67484310-67484329 Msa0516060:CDS 45.0%
! GAAGAGTTTTCCGTACCTGT+GGG - chr3_4:67484398-67484417 None:intergenic 45.0%
! AGAAGAGTTTTCCGTACCTG+TGG - chr3_4:67484399-67484418 None:intergenic 45.0%
GATTCAGAGCCTGTCATCTT+CGG - chr3_4:67484657-67484676 None:intergenic 45.0%
GGAGCTATTCGTATAAACCG+TGG - chr3_4:67484729-67484748 None:intergenic 45.0%
AAAGAGGTTACAAGGACCTC+TGG + chr3_4:67484756-67484775 Msa0516060:CDS 45.0%
TGTTTCAGTGAGAATGCCAG+AGG - chr3_4:67484775-67484794 None:intergenic 45.0%
GCATTCTCACTGAAACAGCA+TGG + chr3_4:67484778-67484797 Msa0516060:CDS 45.0%
!! TTATAAGAGGCGGATTGGGA+GGG + chr3_4:67485400-67485419 Msa0516060:intron 45.0%
TGCAGATGACAACATACAGC+AGG + chr3_4:67485477-67485496 Msa0516060:intron 45.0%
!! GGGTCCACGTCATTTTATGT+TGG + chr3_4:67485737-67485756 Msa0516060:intron 45.0%
!!! CATAGGTTCTTGGTGCCTTT+TGG + chr3_4:67485930-67485949 Msa0516060:intron 45.0%
AGAAACCACATGCTGGCAAA+GGG + chr3_4:67485973-67485992 Msa0516060:CDS 45.0%
! GTATTGGGCATGAAGCATTC+AGG - chr3_4:67486078-67486097 None:intergenic 45.0%
TTCCTTGATGCCCTTCAATC+TGG + chr3_4:67486133-67486152 Msa0516060:CDS 45.0%
ATATGTACCGCCTCAAGAAG+AGG + chr3_4:67486402-67486421 Msa0516060:intron 45.0%
TATGTACCGCCTCAAGAAGA+GGG + chr3_4:67486403-67486422 Msa0516060:intron 45.0%
GCCTCAAGAAGAGGGAAAAT+TGG + chr3_4:67486411-67486430 Msa0516060:intron 45.0%
! CCCAATTTTCCCTCTTCTTG+AGG - chr3_4:67486415-67486434 None:intergenic 45.0%
CATGGGCATTTGTTTCAACC+AGG + chr3_4:67486483-67486502 Msa0516060:intron 45.0%
GAGACACACCGTAATTAAGG+TGG - chr3_4:67486814-67486833 None:intergenic 45.0%
ACTACTCAAGCTACATCGCT+AGG - chr3_4:67486924-67486943 None:intergenic 45.0%
TTAGTGTTGTGGGGTTGAGA+TGG + chr3_4:67486978-67486997 Msa0516060:intron 45.0%
GCTCTTATAATCAGGGAAGG+AGG - chr3_4:67487034-67487053 None:intergenic 45.0%
! CGCCTTACTTGCGGAAATTT+TGG + chr3_4:67487443-67487462 Msa0516060:intron 45.0%
CTCAACACAATGAAGGAGCT+AGG - chr3_4:67487491-67487510 None:intergenic 45.0%
CCTCACACTCAACACAATGA+AGG - chr3_4:67487498-67487517 None:intergenic 45.0%
CCTTCATTGTGTTGAGTGTG+AGG + chr3_4:67487495-67487514 Msa0516060:intron 45.0%
! GCCTCACAAACTAGCTTGTA+AGG - chr3_4:67487656-67487675 None:intergenic 45.0%
AAATCCCAAGGTCACCTTTC+TGG + chr3_4:67487851-67487870 Msa0516060:intron 45.0%
AATCCCAAGGTCACCTTTCT+GGG + chr3_4:67487852-67487871 Msa0516060:intron 45.0%
ATTCCCAGAAAGGTGACCTT+GGG - chr3_4:67487858-67487877 None:intergenic 45.0%
TATTCCCAGAAAGGTGACCT+TGG - chr3_4:67487859-67487878 None:intergenic 45.0%
ATTATTCCTCCACCCTCTTG+TGG + chr3_4:67487969-67487988 Msa0516060:intron 45.0%
TTATTCCTCCACCCTCTTGT+GGG + chr3_4:67487970-67487989 Msa0516060:intron 45.0%
AAAAAGGATCCCCCACAAGA+GGG - chr3_4:67487984-67488003 None:intergenic 45.0%
TAAAAAGGATCCCCCACAAG+AGG - chr3_4:67487985-67488004 None:intergenic 45.0%
AAAAAGGGACAGATCTCAGG+AGG - chr3_4:67488233-67488252 None:intergenic 45.0%
TATACTTATTGAGCAGGGCC+AGG + chr3_4:67488497-67488516 Msa0516060:intron 45.0%
GACCACACATGATGGCAAAA+AGG - chr3_4:67488568-67488587 None:intergenic 45.0%
TAATTGTCCCACCCTTGTGT+TGG + chr3_4:67488658-67488677 Msa0516060:intron 45.0%
CCAAAAAGAGGACCAACACA+AGG - chr3_4:67488673-67488692 None:intergenic 45.0%
!! CCTTGTGTTGGTCCTCTTTT+TGG + chr3_4:67488670-67488689 Msa0516060:intron 45.0%
TTCATCCACTCCCCAAAAAG+AGG - chr3_4:67488685-67488704 None:intergenic 45.0%
! GCTCTCGTGGAACTATTTTC+TGG + chr3_4:67488707-67488726 Msa0516060:intron 45.0%
!!! ACTATTTTCTGGGGCTGTTC+TGG + chr3_4:67488718-67488737 Msa0516060:intron 45.0%
!!! CTATTTTCTGGGGCTGTTCT+GGG + chr3_4:67488719-67488738 Msa0516060:intron 45.0%
!!! TATTTTCTGGGGCTGTTCTG+GGG + chr3_4:67488720-67488739 Msa0516060:intron 45.0%
!! TCACTGGTTCACCCTATTCT+AGG - chr3_4:67488880-67488899 None:intergenic 45.0%
!!! TATTTTGAGACGGAGGGAGT+AGG - chr3_4:67489011-67489030 None:intergenic 45.0%
CACCCGGACCATTCTATTAT+TGG + chr3_4:67489239-67489258 Msa0516060:intron 45.0%
TGGAGGAGATGAGAGTGAAA+AGG + chr3_4:67489343-67489362 Msa0516060:CDS 45.0%
CATTAAGCGTCATCTCTGCT+TGG + chr3_4:67489515-67489534 Msa0516060:CDS 45.0%
!! TCTATTTTGAGGGACCTGCT+AGG - chr3_4:67489723-67489742 None:intergenic 45.0%
TTTGTGAATGCCATGCTTCC+TGG + chr3_4:67490133-67490152 Msa0516060:intron 45.0%
TGATTCTTCACCAGGAAGCA+TGG - chr3_4:67490146-67490165 None:intergenic 45.0%
TGCTTCCTGGTGAAGAATCA+TGG + chr3_4:67490146-67490165 Msa0516060:intron 45.0%
GCTTCCTGGTGAAGAATCAT+GGG + chr3_4:67490147-67490166 Msa0516060:intron 45.0%
AAGCCAATCACCGTTGCTAT+TGG + chr3_4:67490210-67490229 Msa0516060:intron 45.0%
CTTCCAATAGCAACGGTGAT+TGG - chr3_4:67490216-67490235 None:intergenic 45.0%
GAGATGCTCTTCATAATGCG+CGG + chr3_4:67490423-67490442 Msa0516060:CDS 45.0%
!! TCTTCCACCGTTTGTTGTCA+CGG - chr3_4:67490460-67490479 None:intergenic 45.0%
GACAACAAACGGTGGAAGAA+CGG + chr3_4:67490461-67490480 Msa0516060:CDS 45.0%
ACAACAAACGGTGGAAGAAC+GGG + chr3_4:67490462-67490481 Msa0516060:CDS 45.0%
AACTCTGAATACCTCAAGGC+CGG + chr3_4:67490492-67490511 Msa0516060:CDS 45.0%
TGAAAGAGTTTGGACAGTCC+TGG - chr3_4:67490589-67490608 None:intergenic 45.0%
CATGTTTCATACAAGCAGCG+TGG + chr3_4:67490736-67490755 Msa0516060:CDS 45.0%
AGAAGCTCGAAGAGTCTCTA+AGG + chr3_4:67490775-67490794 Msa0516060:CDS 45.0%
GAAGCTCGAAGAGTCTCTAA+GGG + chr3_4:67490776-67490795 Msa0516060:CDS 45.0%
! CTCTAAGGGAAGAGGAGAAT+AGG + chr3_4:67490790-67490809 Msa0516060:CDS 45.0%
GAATAGGCTCCAAGATGCAT+TGG + chr3_4:67490806-67490825 Msa0516060:CDS 45.0%
TATATTGTGGCACCTAGGCT+AGG - chr3_4:67490852-67490871 None:intergenic 45.0%
!! GCAGTAAAATCTGGTTCGGT+AGG - chr3_4:67490975-67490994 None:intergenic 45.0%
ACTCGTGAATGAAACTGGTG+CGG + chr3_4:67491224-67491243 Msa0516060:three_prime_UTR 45.0%
CCCGAATTTCTTCCCTTGTA+TGG - chr3_4:67491354-67491373 None:intergenic 45.0%
!!! ATTTTTATTAATTACTATTT+TGG + chr3_4:67483269-67483288 Msa0516060:intron 5.0%
!! AATAAAAAATAAAAAAAGTA+AGG - chr3_4:67484968-67484987 None:intergenic 5.0%
!!! CATATTTTATTTTTTTTAAA+AGG - chr3_4:67485857-67485876 None:intergenic 5.0%
TGGAAGAGAAGGTTCGTGGA+AGG - chr3_4:67483084-67483103 None:intergenic 50.0%
GAAGTGGAAGAGAAGGTTCG+TGG - chr3_4:67483088-67483107 None:intergenic 50.0%
GCTCCCTCTTCTCGAGTATT+TGG + chr3_4:67484282-67484301 Msa0516060:CDS 50.0%
! AGTTTTCCGTACCTGTGGGA+GGG - chr3_4:67484394-67484413 None:intergenic 50.0%
CTCGCTCTTACATTGCTAGG+TGG + chr3_4:67484614-67484633 Msa0516060:intron 50.0%
GGTGACTATGTGGACACACA+TGG + chr3_4:67485119-67485138 Msa0516060:intron 50.0%
!! GTTATAAGAGGCGGATTGGG+AGG + chr3_4:67485399-67485418 Msa0516060:intron 50.0%
!! TATAAGAGGCGGATTGGGAG+GGG + chr3_4:67485401-67485420 Msa0516060:intron 50.0%
GAGAAACCACATGCTGGCAA+AGG + chr3_4:67485972-67485991 Msa0516060:CDS 50.0%
!! CTCCAGATTGAAGGGCATCA+AGG - chr3_4:67486138-67486157 None:intergenic 50.0%
! TGCCCTTCAATCTGGAGTTG+TGG + chr3_4:67486141-67486160 Msa0516060:CDS 50.0%
! GCCCTTCAATCTGGAGTTGT+GGG + chr3_4:67486142-67486161 Msa0516060:CDS 50.0%
CCCCACAACTCCAGATTGAA+GGG - chr3_4:67486146-67486165 None:intergenic 50.0%
! CCCTTCAATCTGGAGTTGTG+GGG + chr3_4:67486143-67486162 Msa0516060:CDS 50.0%
ACCCCACAACTCCAGATTGA+AGG - chr3_4:67486147-67486166 None:intergenic 50.0%
! ATCTGGAGTTGTGGGGTCAA+TGG + chr3_4:67486150-67486169 Msa0516060:CDS 50.0%
GGTGGGGCCTAAAGAATTTG+AGG + chr3_4:67486203-67486222 Msa0516060:CDS 50.0%
CTATGAGCGCCATTGTGACT+TGG + chr3_4:67486339-67486358 Msa0516060:intron 50.0%
TGCCTTCATTGCCTCCTTCA+TGG + chr3_4:67486863-67486882 Msa0516060:intron 50.0%
GCCTTCATTGCCTCCTTCAT+GGG + chr3_4:67486864-67486883 Msa0516060:intron 50.0%
ACCCATGAAGGAGGCAATGA+AGG - chr3_4:67486868-67486887 None:intergenic 50.0%
GCTACATCGCTAGGTGATGT+GGG - chr3_4:67486915-67486934 None:intergenic 50.0%
AGCTACATCGCTAGGTGATG+TGG - chr3_4:67486916-67486935 None:intergenic 50.0%
CACTTGCATTGTGACACTCC+AGG + chr3_4:67487359-67487378 Msa0516060:intron 50.0%
GGCTTGAGTAGTGCAAGTGA+AGG + chr3_4:67487552-67487571 Msa0516060:intron 50.0%
GTTATGAGGCCTGACTGCAT+GGG + chr3_4:67487621-67487640 Msa0516060:intron 50.0%
TATTCCTCCACCCTCTTGTG+GGG + chr3_4:67487971-67487990 Msa0516060:intron 50.0%
CAGTTCTCTTGGTCAGAACC+TGG + chr3_4:67488008-67488027 Msa0516060:intron 50.0%
! GGCCTTTTTGCCATCATGTG+TGG + chr3_4:67488563-67488582 Msa0516060:intron 50.0%
AAGAGGACCAACACAAGGGT+GGG - chr3_4:67488668-67488687 None:intergenic 50.0%
AAAGAGGACCAACACAAGGG+TGG - chr3_4:67488669-67488688 None:intergenic 50.0%
!! TTGGTCCTCTTTTTGGGGAG+TGG + chr3_4:67488677-67488696 Msa0516060:intron 50.0%
GAGTGGATGAAAAGCTCTCG+TGG + chr3_4:67488694-67488713 Msa0516060:intron 50.0%
CTGGGGAAGTAGTGATCTTG+TGG + chr3_4:67488737-67488756 Msa0516060:intron 50.0%
AGGAAACACTTGCAGAGGCA+AGG - chr3_4:67488860-67488879 None:intergenic 50.0%
AAAGGAGAGACGCAGAACAG+TGG + chr3_4:67489361-67489380 Msa0516060:CDS 50.0%
!! TCTGCTTGGCTTTGCTGATG+AGG + chr3_4:67489529-67489548 Msa0516060:CDS 50.0%
!! CTGCTTGGCTTTGCTGATGA+GGG + chr3_4:67489530-67489549 Msa0516060:CDS 50.0%
GTCTGTCCATAATGCCTAGC+AGG + chr3_4:67489706-67489725 Msa0516060:intron 50.0%
GAAAGCTGCATTGTTCGCGA+AGG + chr3_4:67490387-67490406 Msa0516060:CDS 50.0%
TTGACCGTGACAACAAACGG+TGG + chr3_4:67490453-67490472 Msa0516060:CDS 50.0%
TGGAGAGGAGCTTCTCACAT+GGG + chr3_4:67490524-67490543 Msa0516060:CDS 50.0%
TGGACAGTCCTGGTTGAGAT+GGG - chr3_4:67490579-67490598 None:intergenic 50.0%
TTGGACAGTCCTGGTTGAGA+TGG - chr3_4:67490580-67490599 None:intergenic 50.0%
GTCGAAGCTGCTTACTGTGA+AGG - chr3_4:67490674-67490693 None:intergenic 50.0%
ACTCGCAACAATGGCGTACA+TGG + chr3_4:67490709-67490728 Msa0516060:CDS 50.0%
CTCGCAACAATGGCGTACAT+GGG + chr3_4:67490710-67490729 Msa0516060:CDS 50.0%
GTTTCATACAAGCAGCGTGG+AGG + chr3_4:67490739-67490758 Msa0516060:CDS 50.0%
! CGAAGAGTCTCTAAGGGAAG+AGG + chr3_4:67490782-67490801 Msa0516060:CDS 50.0%
CTTCCTTGGCCAATGCATCT+TGG - chr3_4:67490818-67490837 None:intergenic 50.0%
! CAAGATGCATTGGCCAAGGA+AGG + chr3_4:67490816-67490835 Msa0516060:CDS 50.0%
AGGTGAACTACCACCTTCCT+TGG - chr3_4:67490832-67490851 None:intergenic 50.0%
AAAATGGCTCAAGGAAGCCC+AGG + chr3_4:67490913-67490932 Msa0516060:CDS 50.0%
AAATGGCTCAAGGAAGCCCA+GGG + chr3_4:67490914-67490933 Msa0516060:CDS 50.0%
ATCATGGGAGGTAGTCTCTC+TGG - chr3_4:67490942-67490961 None:intergenic 50.0%
!! GTAGGCTTCTGGAGCATCAT+GGG - chr3_4:67490957-67490976 None:intergenic 50.0%
!! AATCTGGTTCGGTAGGCTTC+TGG - chr3_4:67490968-67490987 None:intergenic 50.0%
TACCTGTGGGAGGGGAAGAA+CGG - chr3_4:67484385-67484404 None:intergenic 55.0%
TTCTTCCCCTCCCACAGGTA+CGG + chr3_4:67484385-67484404 Msa0516060:intron 55.0%
! GTTTTCCGTACCTGTGGGAG+GGG - chr3_4:67484393-67484412 None:intergenic 55.0%
! GAGTTTTCCGTACCTGTGGG+AGG - chr3_4:67484395-67484414 None:intergenic 55.0%
CTCACTGAAACAGCATGGGC+TGG + chr3_4:67484783-67484802 Msa0516060:CDS 55.0%
!! ATAAGAGGCGGATTGGGAGG+GGG + chr3_4:67485402-67485421 Msa0516060:intron 55.0%
ACAAGCCCTTTGCCAGCATG+TGG - chr3_4:67485981-67486000 None:intergenic 55.0%
ACACTCCAGGCCCATAGCTT+GGG + chr3_4:67487372-67487391 Msa0516060:intron 55.0%
TTCCGCAAGTAAGGCGGCTA+GGG - chr3_4:67487439-67487458 None:intergenic 55.0%
TTTCCGCAAGTAAGGCGGCT+AGG - chr3_4:67487440-67487459 None:intergenic 55.0%
GGTTATGAGGCCTGACTGCA+TGG + chr3_4:67487620-67487639 Msa0516060:intron 55.0%
ATTCCTCCACCCTCTTGTGG+GGG + chr3_4:67487972-67487991 Msa0516060:intron 55.0%
GAGGGACCTGCTAGGCATTA+TGG - chr3_4:67489715-67489734 None:intergenic 55.0%
CTCCTCTCCACAGAAGTCAC+CGG - chr3_4:67490514-67490533 None:intergenic 55.0%
GTGGAGAGGAGCTTCTCACA+TGG + chr3_4:67490523-67490542 Msa0516060:CDS 55.0%
GGAAGGTTGGATGCAGAACG+AGG - chr3_4:67490558-67490577 None:intergenic 55.0%
CCTGGTTGAGATGGGAAGGT+TGG - chr3_4:67490571-67490590 None:intergenic 55.0%
CCAACCTTCCCATCTCAACC+AGG + chr3_4:67490568-67490587 Msa0516060:CDS 55.0%
CAGTCCTGGTTGAGATGGGA+AGG - chr3_4:67490575-67490594 None:intergenic 55.0%
TCATACAAGCAGCGTGGAGG+CGG + chr3_4:67490742-67490761 Msa0516060:CDS 55.0%
! GCTCCAAGATGCATTGGCCA+AGG + chr3_4:67490812-67490831 Msa0516060:CDS 55.0%
! GATGCATTGGCCAAGGAAGG+TGG + chr3_4:67490819-67490838 Msa0516060:CDS 55.0%
GGTGGTAGTTCACCTAGCCT+AGG + chr3_4:67490837-67490856 Msa0516060:CDS 55.0%
!! GGTAGGCTTCTGGAGCATCA+TGG - chr3_4:67490958-67490977 None:intergenic 55.0%
TCGCACTTTGTGATGGCCGA+TGG + chr3_4:67491272-67491291 Msa0516060:three_prime_UTR 55.0%
TTGCCTCCTTCATGGGTGCG+AGG + chr3_4:67486871-67486890 Msa0516060:intron 60.0%
TCTCCTCGCACCCATGAAGG+AGG - chr3_4:67486877-67486896 None:intergenic 60.0%
CCTTCATGGGTGCGAGGAGA+CGG + chr3_4:67486877-67486896 Msa0516060:intron 60.0%
CTTCATGGGTGCGAGGAGAC+GGG + chr3_4:67486878-67486897 Msa0516060:intron 60.0%
GACACTCCAGGCCCATAGCT+TGG + chr3_4:67487371-67487390 Msa0516060:intron 60.0%
TCATGCCCAAGCTATGGGCC+TGG - chr3_4:67487380-67487399 None:intergenic 60.0%
GGCCCATAGCTTGGGCATGA+CGG + chr3_4:67487380-67487399 Msa0516060:intron 60.0%
GCCCATAGCTTGGGCATGAC+GGG + chr3_4:67487381-67487400 Msa0516060:intron 60.0%
CCCCGTCATGCCCAAGCTAT+GGG - chr3_4:67487385-67487404 None:intergenic 60.0%
CCCATAGCTTGGGCATGACG+GGG + chr3_4:67487382-67487401 Msa0516060:intron 60.0%
ACCCCGTCATGCCCAAGCTA+TGG - chr3_4:67487386-67487405 None:intergenic 60.0%
! CTTGGGCATGACGGGGTTGT+TGG + chr3_4:67487389-67487408 Msa0516060:intron 60.0%
TCCCCTAGCCGCCTTACTTG+CGG + chr3_4:67487434-67487453 Msa0516060:intron 60.0%
TCCGCAAGTAAGGCGGCTAG+GGG - chr3_4:67487438-67487457 None:intergenic 60.0%
TGAACTCGGCCCATGCAGTC+AGG - chr3_4:67487633-67487652 None:intergenic 60.0%
AAGGATCCCCCACAAGAGGG+TGG - chr3_4:67487981-67488000 None:intergenic 60.0%
GTCTCACCCATCATTGGGCC+TGG - chr3_4:67488518-67488537 None:intergenic 60.0%
CACAGAAGTCACCGGCCTTG+AGG - chr3_4:67490506-67490525 None:intergenic 60.0%
CTCAAGGCCGGTGACTTCTG+TGG + chr3_4:67490504-67490523 Msa0516060:CDS 60.0%
GGTAGTCTCTCTGGCACCCT+GGG - chr3_4:67490933-67490952 None:intergenic 60.0%
AGGTAGTCTCTCTGGCACCC+TGG - chr3_4:67490934-67490953 None:intergenic 60.0%
!! GGCTTCTGGAGCATCATGGG+AGG - chr3_4:67490954-67490973 None:intergenic 60.0%
TGCCGTTCTTCCCCTCCCAC+AGG + chr3_4:67484380-67484399 Msa0516060:CDS 65.0%
CCGTCTCCTCGCACCCATGA+AGG - chr3_4:67486880-67486899 None:intergenic 65.0%
GATCCCCCACAAGAGGGTGG+AGG - chr3_4:67487978-67487997 None:intergenic 65.0%
AGCAGGGCCAGGCCCAATGA+TGG + chr3_4:67488508-67488527 Msa0516060:intron 65.0%
GCAGGGCCAGGCCCAATGAT+GGG + chr3_4:67488509-67488528 Msa0516060:intron 65.0%
GGCCGGTGACTTCTGTGGAG+AGG + chr3_4:67490509-67490528 Msa0516060:CDS 65.0%
!! GAGGCGGATTGGGAGGGGGA+AGG + chr3_4:67485406-67485425 Msa0516060:intron 70.0%
CATGGGTGCGAGGAGACGGG+AGG + chr3_4:67486881-67486900 Msa0516060:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 67482972 67491714 67482972 ID=Msa0516060;Name=Msa0516060
chr3_4 mRNA 67482972 67491714 67482972 ID=Msa0516060-mRNA-1;Parent=Msa0516060;Name=Msa0516060-mRNA-1;_AED=0.09;_eAED=0.09;_QI=293|1|1|1|0.62|0.66|9|707|713
chr3_4 exon 67482972 67483013 67482972 ID=Msa0516060-mRNA-1:exon:17592;Parent=Msa0516060-mRNA-1
chr3_4 exon 67483038 67483187 67483038 ID=Msa0516060-mRNA-1:exon:17593;Parent=Msa0516060-mRNA-1
chr3_4 exon 67483333 67483462 67483333 ID=Msa0516060-mRNA-1:exon:17594;Parent=Msa0516060-mRNA-1
chr3_4 exon 67483840 67484401 67483840 ID=Msa0516060-mRNA-1:exon:17595;Parent=Msa0516060-mRNA-1
chr3_4 exon 67484633 67484845 67484633 ID=Msa0516060-mRNA-1:exon:17596;Parent=Msa0516060-mRNA-1
chr3_4 exon 67485935 67486224 67485935 ID=Msa0516060-mRNA-1:exon:17597;Parent=Msa0516060-mRNA-1
chr3_4 exon 67488011 67488122 67488011 ID=Msa0516060-mRNA-1:exon:17598;Parent=Msa0516060-mRNA-1
chr3_4 exon 67489315 67489551 67489315 ID=Msa0516060-mRNA-1:exon:17599;Parent=Msa0516060-mRNA-1
chr3_4 exon 67490309 67491714 67490309 ID=Msa0516060-mRNA-1:exon:17600;Parent=Msa0516060-mRNA-1
chr3_4 five_prime_UTR 67482972 67483013 67482972 ID=Msa0516060-mRNA-1:five_prime_utr;Parent=Msa0516060-mRNA-1
chr3_4 five_prime_UTR 67483038 67483187 67483038 ID=Msa0516060-mRNA-1:five_prime_utr;Parent=Msa0516060-mRNA-1
chr3_4 five_prime_UTR 67483333 67483433 67483333 ID=Msa0516060-mRNA-1:five_prime_utr;Parent=Msa0516060-mRNA-1
chr3_4 CDS 67483434 67483462 67483434 ID=Msa0516060-mRNA-1:cds;Parent=Msa0516060-mRNA-1
chr3_4 CDS 67483840 67484401 67483840 ID=Msa0516060-mRNA-1:cds;Parent=Msa0516060-mRNA-1
chr3_4 CDS 67484633 67484845 67484633 ID=Msa0516060-mRNA-1:cds;Parent=Msa0516060-mRNA-1
chr3_4 CDS 67485935 67486224 67485935 ID=Msa0516060-mRNA-1:cds;Parent=Msa0516060-mRNA-1
chr3_4 CDS 67488011 67488122 67488011 ID=Msa0516060-mRNA-1:cds;Parent=Msa0516060-mRNA-1
chr3_4 CDS 67489315 67489551 67489315 ID=Msa0516060-mRNA-1:cds;Parent=Msa0516060-mRNA-1
chr3_4 CDS 67490309 67491007 67490309 ID=Msa0516060-mRNA-1:cds;Parent=Msa0516060-mRNA-1
chr3_4 three_prime_UTR 67491008 67491714 67491008 ID=Msa0516060-mRNA-1:three_prime_utr;Parent=Msa0516060-mRNA-1
Gene Sequence

>Msa0516060

ATGACTTTTCATCAAGATAAATTTGTTAGATTTCAGGACTGGAGTTCAGAGGTTAACTCTCCCGGAATAATTCACATTACGCAGTCAGGGAGAATTAAAACTACACTGAAATCAGTTTCAAGCAAGTTTCAAAGGGGATTCGAATCTAGTTCTGAGAGGATAAAGGGATTTGCAAAAAAACCTTTTAAATCTTTTTCACAAAGCTGTGCTCTTACTAGATGTTTTAGTTCTAGAAATAAAATTCTTGATCCGCAGGGTCCTTTTCTTCAAAAATGGAACAAAATATTTGTGTTATCGTGTCTTATTGCTGTATCGATTGATCCTTTGTTCTTTTATATCCCTGTGATTGATGATGGCAAGAAATGTCTTTCACGGGACAAAAAAATGGAAACTACGGCAACTGTTTTAAGGTCTTTCTCCGACATTTTTTATATTATTCATATAATTTTTCAATTTCGTACTGGATTTATTGCTCCCTCTTCTCGAGTATTTGGAAGAGGTGTGTTGGTTCAAGATGCTTGGGCAATAGCAAAGAGATATATGGCATCATATTTCTTAGTTGACATTCTTGCCGTTCTTCCCCTCCCACAGGTGGTTATTCTATTTATCATTCCGAAGATGACAGGCTCTGAATCACTGAACACGAAAAACTTGCTGAAATTTATTGTATTCTTCCAATATGTGCCACGGTTTATACGAATAGCTCCACTATATAAAGAGGTTACAAGGACCTCTGGCATTCTCACTGAAACAGCATGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTTGCAAGTCATGTTCTTGGTGCCTTTTGGTATTTGTTTTCTATAGAAAGAGAAACCACATGCTGGCAAAGGGCTTGTCAAAAAAATACCACGTGTATAAAGGCAGAATTGTATTGTGATGATCATCATGGATTGAGCACAATTACAACATTCCTGAATGCTTCATGCCCAATACAGAATCCAGATAAAAAGCTCTTTGATTTTGGAATTTTCCTTGATGCCCTTCAATCTGGAGTTGTGGGGTCAATGGACTTCCCACAGAAATTTTTTTATTGTTTTTGGTGGGGCCTAAAGAATTTGAGTTCTCTTGGTCAGAACCTGGCAACAAGTACCTTTGTTTGGGAAATCTTCTTTGCAATTTTCATTTCCATTGCTGGTTTGGTATTATTTGCATTCCTCATTGGAAATATGCAGACATATTTACAGTCAACAACTACAAGATTGGAGGAGATGAGAGTGAAAAGGAGAGACGCAGAACAGTGGATGTCACATCGACTACTCCCTGACCACTTGAGAGAAAGAATCAGACGACATGAGCAATACAAATGGCAAGAAACTAGAGGAGTTGATGAAGACAATTTGATCCGTAATCTTCCCAAGGATTTAAGAAGGGACATTAAGCGTCATCTCTGCTTGGCTTTGCTGATGAGGGTGCCAATATTTGAGAAGATGGATGAGCAACTTTTGGATGCAGTGTGTGACTGTCTCAAACCAGTACTTTACACGAAAGAAAGCTGCATTGTTCGCGAAGGAGATCCTGTTGATGAGATGCTCTTCATAATGCGCGGCAAATTGTTGACCGTGACAACAAACGGTGGAAGAACGGGTTTCTTCAACTCTGAATACCTCAAGGCCGGTGACTTCTGTGGAGAGGAGCTTCTCACATGGGCATTAGATCCTCGTTCTGCATCCAACCTTCCCATCTCAACCAGGACTGTCCAAACTCTTTCAGAAGTGGAAGCATTTGCTCTAAAAGCTGAGGATTTGAAGTTTGTTGCATCTCAATTTCGGCGCCTTCACAGTAAGCAGCTTCGACACACTTTCAGATTTTACTCGCAACAATGGCGTACATGGGCTGCATGTTTCATACAAGCAGCGTGGAGGCGGTATTGTAAAAAGAAGCTCGAAGAGTCTCTAAGGGAAGAGGAGAATAGGCTCCAAGATGCATTGGCCAAGGAAGGTGGTAGTTCACCTAGCCTAGGTGCCACAATATATGCTTCAAGGTTTGCTGCAAATGTCCTTCGAGCCATACGTAAAAATGGCTCAAGGAAGCCCAGGGTGCCAGAGAGACTACCTCCCATGATGCTCCAGAAGCCTACCGAACCAGATTTTACTGCTGAAGAGCAATAG
Protein sequence

>Msa0516060

MTFHQDKFVRFQDWSSEVNSPGIIHITQSGRIKTTLKSVSSKFQRGFESSSERIKGFAKKPFKSFSQSCALTRCFSSRNKILDPQGPFLQKWNKIFVLSCLIAVSIDPLFFYIPVIDDGKKCLSRDKKMETTATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVQDAWAIAKRYMASYFLVDILAVLPLPQVVILFIIPKMTGSESLNTKNLLKFIVFFQYVPRFIRIAPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWQRACQKNTTCIKAELYCDDHHGLSTITTFLNASCPIQNPDKKLFDFGIFLDALQSGVVGSMDFPQKFFYCFWWGLKNLSSLGQNLATSTFVWEIFFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDHLRERIRRHEQYKWQETRGVDEDNLIRNLPKDLRRDIKRHLCLALLMRVPIFEKMDEQLLDAVCDCLKPVLYTKESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPRSASNLPISTRTVQTLSEVEAFALKAEDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCKKKLEESLREEENRLQDALAKEGGSSPSLGATIYASRFAANVLRAIRKNGSRKPRVPERLPPMMLQKPTEPDFTAEEQ*