AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0376220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376220 MtrunA17_Chr3g0126541 99.728 367 1 0 1 367 347 713 0.0 761
Msa0376220 MtrunA17_Chr1g0158861 84.741 367 55 1 2 367 350 716 0.0 648
Msa0376220 MtrunA17_Chr7g0275581 77.112 367 82 2 2 367 353 718 0.0 567
Msa0376220 MtrunA17_Chr4g0073941 68.132 364 111 3 3 366 371 729 1.21e-171 496
Msa0376220 MtrunA17_Chr8g0347121 64.213 394 106 5 2 362 332 723 1.04e-170 493
Msa0376220 MtrunA17_Chr4g0001481 63.243 370 120 4 3 364 377 738 1.68e-161 470
Msa0376220 MtrunA17_Chr2g0326871 61.685 368 127 3 3 365 345 703 3.28e-156 455
Msa0376220 MtrunA17_Chr3g0139071 60.417 384 125 4 3 367 349 724 4.06e-156 456
Msa0376220 MtrunA17_Chr2g0305771 60.686 379 125 3 2 365 318 687 1.82e-155 453
Msa0376220 MtrunA17_Chr1g0181121 59.030 371 145 3 2 365 311 681 4.03e-153 447
Msa0376220 MtrunA17_Chr3g0125651 59.894 379 134 3 3 364 311 688 1.49e-152 446
Msa0376220 MtrunA17_Chr7g0228181 58.649 370 140 4 3 366 319 681 9.39e-150 438
Msa0376220 MtrunA17_Chr4g0028861 70.345 290 86 0 3 292 392 681 1.07e-145 428
Msa0376220 MtrunA17_Chr2g0318561 44.912 285 153 3 5 288 166 447 2.90e-78 249
Msa0376220 MtrunA17_Chr8g0360821 43.860 285 156 3 5 288 343 624 2.73e-75 245
Msa0376220 MtrunA17_Chr7g0218341 41.901 284 162 2 6 288 391 672 4.07e-69 230
Msa0376220 MtrunA17_Chr6g0481021 44.816 299 146 6 5 292 400 690 2.92e-66 222
Msa0376220 MtrunA17_Chr6g0480671 43.831 308 154 6 6 302 466 765 6.43e-61 209
Msa0376220 MtrunA17_Chr6g0480851 42.295 305 155 6 5 296 454 750 2.84e-58 201
Msa0376220 MtrunA17_Chr6g0480781 38.264 311 171 7 5 302 439 741 1.37e-57 199
Msa0376220 MtrunA17_Chr5g0395421 40.794 277 144 5 6 269 86 355 1.84e-53 181
Msa0376220 MtrunA17_Chr6g0480681 38.284 303 161 8 5 293 410 700 7.66e-50 178
Msa0376220 MtrunA17_Chr6g0480741 37.755 294 163 5 5 285 382 668 4.66e-48 172
Msa0376220 MtrunA17_Chr2g0326851 50.000 140 56 3 231 365 3 133 2.57e-36 128
Msa0376220 MtrunA17_Chr6g0480771 35.317 252 140 6 52 290 12 253 3.06e-36 133
Msa0376220 MtrunA17_Chr6g0480841 41.919 198 95 5 106 290 2 192 1.06e-34 127
Msa0376220 MtrunA17_Chr4g0063141 25.243 206 149 4 6 209 239 441 2.86e-14 74.3
Msa0376220 MtrunA17_Chr2g0277651 23.106 264 189 6 6 263 262 517 1.60e-13 72.0
Msa0376220 MtrunA17_Chr3g0138671 22.059 204 154 3 7 209 243 442 2.34e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376220 AT5G53130.1 86.921 367 46 2 2 366 350 716 0.0 648
Msa0376220 AT1G01340.2 70.509 373 100 2 2 366 337 707 0.0 545
Msa0376220 AT1G01340.1 70.509 373 100 2 2 366 332 702 0.0 545
Msa0376220 AT4G01010.1 71.233 365 92 2 2 363 338 692 0.0 542
Msa0376220 AT4G01010.2 71.233 365 92 2 2 363 338 692 0.0 542
Msa0376220 AT2G46430.1 67.663 368 113 5 2 366 341 705 2.30e-178 512
Msa0376220 AT2G46430.2 67.663 368 113 5 2 366 341 705 2.30e-178 512
Msa0376220 AT4G30560.5 67.486 366 107 3 2 366 351 705 1.11e-177 511
Msa0376220 AT4G30560.2 67.486 366 107 3 2 366 351 705 1.11e-177 511
Msa0376220 AT4G30560.3 67.486 366 107 3 2 366 351 705 1.11e-177 511
Msa0376220 AT4G30560.1 67.486 366 107 3 2 366 377 731 1.56e-177 511
Msa0376220 AT4G30560.4 67.486 366 107 3 2 366 377 731 1.56e-177 511
Msa0376220 AT2G23980.6 66.757 370 119 2 2 367 351 720 2.78e-176 508
Msa0376220 AT2G23980.9 66.757 370 119 2 2 367 378 747 5.40e-176 508
Msa0376220 AT2G23980.10 66.757 370 119 2 2 367 378 747 5.40e-176 508
Msa0376220 AT2G23980.1 66.757 370 119 2 2 367 378 747 5.40e-176 508
Msa0376220 AT2G23980.4 66.757 370 119 2 2 367 378 747 5.40e-176 508
Msa0376220 AT2G23980.5 66.757 370 119 2 2 367 378 747 5.40e-176 508
Msa0376220 AT2G23980.3 66.757 370 119 2 2 367 401 770 1.35e-175 508
Msa0376220 AT2G23980.2 66.757 370 119 2 2 367 401 770 1.35e-175 508
Msa0376220 AT2G23980.8 66.757 370 119 2 2 367 401 770 1.35e-175 508
Msa0376220 AT2G23980.7 66.757 370 119 2 2 367 401 770 1.35e-175 508
Msa0376220 AT5G57940.3 66.209 364 115 2 2 365 355 710 8.68e-173 498
Msa0376220 AT5G57940.1 66.209 364 115 2 2 365 362 717 1.27e-172 498
Msa0376220 AT5G57940.2 66.209 364 115 2 2 365 362 717 1.27e-172 498
Msa0376220 AT1G19780.2 62.632 380 118 3 3 364 162 535 8.25e-169 482
Msa0376220 AT1G19780.1 62.632 380 118 3 3 364 373 746 9.79e-167 484
Msa0376220 AT1G15990.1 63.660 377 118 3 3 365 367 738 4.22e-166 482
Msa0376220 AT2G28260.1 61.433 363 120 1 3 365 336 678 5.73e-155 452
Msa0376220 AT2G28260.2 61.433 363 120 1 3 365 296 638 6.88e-155 450
Msa0376220 AT2G24610.1 59.383 389 125 4 3 366 346 726 1.10e-154 452
Msa0376220 AT2G24610.2 59.383 389 125 4 3 366 361 741 4.19e-154 451
Msa0376220 AT3G48010.1 56.995 386 137 3 3 362 322 704 9.78e-151 442
Msa0376220 AT4G30360.1 58.311 379 137 3 3 366 346 718 2.26e-150 441
Msa0376220 AT5G14870.1 55.102 392 150 3 2 367 313 704 4.57e-148 435
Msa0376220 AT2G46440.2 63.077 325 116 3 2 324 121 443 5.56e-141 408
Msa0376220 AT2G46440.1 63.077 325 116 3 2 324 299 621 5.15e-139 409
Msa0376220 AT2G46450.3 51.093 366 162 5 2 366 263 612 4.00e-120 360
Msa0376220 AT2G46450.2 51.093 366 162 5 2 366 276 625 5.40e-120 360
Msa0376220 AT2G46450.4 51.093 366 162 5 2 366 299 648 1.21e-119 360
Msa0376220 AT2G46450.1 51.093 366 162 5 2 366 299 648 1.21e-119 360
Msa0376220 AT5G54250.2 42.456 285 160 3 5 288 364 645 7.08e-72 237
Msa0376220 AT5G54250.1 42.456 285 160 3 5 288 364 645 7.08e-72 237
Msa0376220 AT5G54250.4 42.456 285 160 3 5 288 364 645 7.08e-72 237
Msa0376220 AT5G15410.1 41.637 281 161 2 6 285 399 677 4.27e-67 225
Msa0376220 AT5G15410.2 41.637 281 161 2 6 285 398 676 5.12e-67 225
Msa0376220 AT5G54250.3 41.404 285 158 4 5 288 364 640 9.21e-67 223
Msa0376220 AT3G17690.1 42.053 302 158 6 2 294 425 718 2.79e-66 223
Msa0376220 AT3G17700.1 42.808 292 147 6 6 285 462 745 3.85e-59 204
Msa0376220 AT3G17690.2 44.444 216 113 2 2 217 425 633 4.19e-53 186
Msa0376220 AT3G17700.2 44.954 218 112 3 6 223 462 671 6.97e-48 172
Msa0376220 AT3G17690.3 46.739 92 49 0 2 93 425 516 2.46e-19 89.7
Msa0376220 AT5G46240.1 24.599 187 139 2 5 190 245 430 2.58e-12 68.6
Msa0376220 AT2G26650.1 24.757 206 150 4 6 209 239 441 1.09e-11 67.0
Msa0376220 AT2G26650.2 24.757 206 150 4 6 209 134 336 1.45e-11 66.2
Msa0376220 AT4G22200.2 21.078 204 158 2 6 209 263 463 3.09e-11 65.1
Msa0376220 AT4G22200.1 21.078 204 158 2 6 209 263 463 4.67e-11 64.7

Find 129 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGTTCTAGTACCATTT+TGG 0.181352 3_1:-76261495 None:intergenic
TTTACTTCTTCATAGGTTCT+TGG 0.239651 3_1:+76256264 Msa0376220:five_prime_UTR
CATAGGTTCTTGGTGCCTTT+TGG 0.239954 3_1:+76256274 Msa0376220:five_prime_UTR
CTTCCACTTCTGAAAGAGTT+TGG 0.261316 3_1:-76260780 None:intergenic
TCATCCATCTTCTCAAATAT+TGG 0.272792 3_1:-76260496 None:intergenic
TTTCATTTCCATTGCTGGTT+TGG 0.276243 3_1:+76258412 Msa0376220:CDS
AATCTGGTTCGGTAGGCTTC+TGG 0.288039 3_1:-76261149 None:intergenic
CCCGAATTTCTTCCCTTGTA+TGG 0.311997 3_1:-76261535 None:intergenic
AGAAGCTCGAAGAGTCTCTA+AGG 0.322669 3_1:+76260959 Msa0376220:CDS
TTTCTGATTTACTTCTTCAT+AGG 0.327195 3_1:+76256257 Msa0376220:five_prime_UTR
TTCCTTGATGCCCTTCAATC+TGG 0.329443 3_1:+76256477 Msa0376220:five_prime_UTR
TGGCAACAAGTACCTTTGTT+TGG 0.341740 3_1:+76258372 Msa0376220:CDS
TTAAATCCTTGGGAAGATTA+CGG 0.342810 3_1:-76259668 None:intergenic
ACCATACAAGGGAAGAAATT+CGG 0.344726 3_1:+76261534 Msa0376220:three_prime_UTR
AATGTCCCTTCTTAAATCCT+TGG 0.349785 3_1:-76259679 None:intergenic
GAAGATGGATGAGCAACTTT+TGG 0.350421 3_1:+76260507 Msa0376220:CDS
TAAAAGTGATAAACTGATAA+AGG 0.353598 3_1:-76261561 None:intergenic
ATTCTTTCTCTCAAGTGGTC+AGG 0.356933 3_1:-76259585 None:intergenic
AGTTTGTTGCATCTCAATTT+CGG 0.361126 3_1:+76260830 Msa0376220:CDS
GGCAACAAGTACCTTTGTTT+GGG 0.366892 3_1:+76258373 Msa0376220:CDS
GTATTGGGCATGAAGCATTC+AGG 0.376090 3_1:-76256419 None:intergenic
TGCTCTTCAGCAGTAAAATC+TGG 0.380553 3_1:-76261165 None:intergenic
AGGTAGTCTCTCTGGCACCC+TGG 0.388492 3_1:-76261115 None:intergenic
GTATTATTTGCATTCCTCAT+TGG 0.391249 3_1:+76258434 Msa0376220:CDS
AAGCAAACCTCAAATTCTTT+AGG 0.394576 3_1:-76256554 None:intergenic
CCATACAAGGGAAGAAATTC+GGG 0.400979 3_1:+76261535 Msa0376220:three_prime_UTR
ACAACAAACGGTGGAAGAAC+GGG 0.404405 3_1:+76260646 Msa0376220:CDS
CTTCCTTGGCCAATGCATCT+TGG 0.404702 3_1:-76260999 None:intergenic
ACTCGCAACAATGGCGTACA+TGG 0.414933 3_1:+76260893 Msa0376220:CDS
GCCCTTCAATCTGGAGTTGT+GGG 0.423331 3_1:+76256486 Msa0376220:five_prime_UTR
TGGAGGAGATGAGAGTGAAA+AGG 0.424516 3_1:+76259526 Msa0376220:CDS
GGTAGTCTCTCTGGCACCCT+GGG 0.425998 3_1:-76261114 None:intergenic
ATGTCCCTTCTTAAATCCTT+GGG 0.426279 3_1:-76259678 None:intergenic
ATCTGGAGTTGTGGGGTCAA+TGG 0.428895 3_1:+76256494 Msa0376220:exon
ACAGTCAACAACTACAAGAT+TGG 0.430528 3_1:+76259506 Msa0376220:CDS
GGTGCCAATATTTGAGAAGA+TGG 0.434132 3_1:+76260492 Msa0376220:intron
CTTTCTTTCGTGTAAAGTAC+TGG 0.440645 3_1:-76260553 None:intergenic
AATTAGAATGAAATTATGAT+AGG 0.441711 3_1:+76261260 Msa0376220:three_prime_UTR
ATGAAGAGCATCTCATCAAC+AGG 0.441941 3_1:-76260598 None:intergenic
ATGAATAACGGTACCATACA+AGG 0.446565 3_1:+76261522 Msa0376220:three_prime_UTR
AAATAACAAAACTGACATCT+TGG 0.448095 3_1:-76261287 None:intergenic
GTGCCACAATATATGCTTCA+AGG 0.449161 3_1:+76261043 Msa0376220:CDS
CAGTTCTCTTGGTCAGAACC+TGG 0.452079 3_1:+76258352 Msa0376220:intron
GGTGGGGCCTAAAGAATTTG+AGG 0.456770 3_1:+76256547 Msa0376220:CDS
TGAAAGAGTTTGGACAGTCC+TGG 0.457546 3_1:-76260770 None:intergenic
GTCTGATTCTTTCTCTCAAG+TGG 0.459265 3_1:-76259590 None:intergenic
CTGCTTGGCTTTGCTGATGA+GGG 0.473481 3_1:+76259713 Msa0376220:CDS
TTCTTTCTCTCAAGTGGTCA+GGG 0.474389 3_1:-76259584 None:intergenic
CTCTAAGGGAAGAGGAGAAT+AGG 0.475787 3_1:+76260974 Msa0376220:CDS
TTGGACAGTCCTGGTTGAGA+TGG 0.479012 3_1:-76260761 None:intergenic
ATCATGGGAGGTAGTCTCTC+TGG 0.479793 3_1:-76261123 None:intergenic
TCTTCCACCGTTTGTTGTCA+CGG 0.491871 3_1:-76260641 None:intergenic
TCTGCTTGGCTTTGCTGATG+AGG 0.497625 3_1:+76259712 Msa0376220:CDS
TTGTTGACCGTGACAACAAA+CGG 0.498587 3_1:+76260634 Msa0376220:CDS
ATCTTCCCAAGGATTTAAGA+AGG 0.498930 3_1:+76259673 Msa0376220:CDS
ATTCCTCATTGGAAATATGC+AGG 0.500965 3_1:+76258445 Msa0376220:CDS
CGAAGAGTCTCTAAGGGAAG+AGG 0.502897 3_1:+76260966 Msa0376220:CDS
CTCCAGATTGAAGGGCATCA+AGG 0.507823 3_1:-76256479 None:intergenic
AAACAAAGGTACTTGTTGCC+AGG 0.512386 3_1:-76258370 None:intergenic
GAGAAACCACATGCTGGCAA+AGG 0.516634 3_1:+76256316 Msa0376220:five_prime_UTR
TTCAGCAGTAAAATCTGGTT+CGG 0.516650 3_1:-76261160 None:intergenic
GACAACAAACGGTGGAAGAA+CGG 0.517367 3_1:+76260645 Msa0376220:CDS
AAGAGCAATAGTGTAATCAA+TGG 0.518572 3_1:+76261181 Msa0376220:exon
TGGACAGTCCTGGTTGAGAT+GGG 0.519210 3_1:-76260760 None:intergenic
TGCCCTTCAATCTGGAGTTG+TGG 0.519473 3_1:+76256485 Msa0376220:five_prime_UTR
ACCCCACAACTCCAGATTGA+AGG 0.526110 3_1:-76256488 None:intergenic
AGGTGAACTACCACCTTCCT+TGG 0.526375 3_1:-76261013 None:intergenic
TATAGAAAACAAATACCAAA+AGG 0.526421 3_1:-76256289 None:intergenic
GTAGGCTTCTGGAGCATCAT+GGG 0.527145 3_1:-76261138 None:intergenic
CTGTAAGAAAAGAAAAGAAA+TGG 0.527777 3_1:+76261220 Msa0376220:three_prime_UTR
GGTAGGCTTCTGGAGCATCA+TGG 0.527893 3_1:-76261139 None:intergenic
CATTAAGCGTCATCTCTGCT+TGG 0.528466 3_1:+76259698 Msa0376220:CDS
GCAGTAAAATCTGGTTCGGT+AGG 0.529158 3_1:-76261156 None:intergenic
AGAAACCACATGCTGGCAAA+GGG 0.535280 3_1:+76256317 Msa0376220:five_prime_UTR
TCATACAAGCAGCGTGGAGG+CGG 0.537327 3_1:+76260926 Msa0376220:CDS
AACAAATGTCAAATGAATAA+CGG 0.538196 3_1:+76261510 Msa0376220:three_prime_UTR
AAAATGGCTCAAGGAAGCCC+AGG 0.538256 3_1:+76261097 Msa0376220:CDS
GAATAGGCTCCAAGATGCAT+TGG 0.545962 3_1:+76260990 Msa0376220:CDS
ACAAGCCCTTTGCCAGCATG+TGG 0.545968 3_1:-76256322 None:intergenic
CCCCACAACTCCAGATTGAA+GGG 0.546523 3_1:-76256487 None:intergenic
AACTCTGAATACCTCAAGGC+CGG 0.549969 3_1:+76260676 Msa0376220:CDS
TTGTATTGTGATGATCATCA+TGG 0.551055 3_1:+76256375 Msa0376220:five_prime_UTR
GACGACATGAGCAATACAAA+TGG 0.558039 3_1:+76259610 Msa0376220:CDS
TCGCACTTTGTGATGGCCGA+TGG 0.558752 3_1:+76261456 Msa0376220:three_prime_UTR
CCTGGTTGAGATGGGAAGGT+TGG 0.564304 3_1:-76260752 None:intergenic
CACAGAAGTCACCGGCCTTG+AGG 0.566343 3_1:-76260687 None:intergenic
CAAACAGATATTGTAACCCT+AGG 0.568796 3_1:+76261741 Msa0376220:three_prime_UTR
AAATAATACCAAACCAGCAA+TGG 0.572488 3_1:-76258420 None:intergenic
GAAGCTCGAAGAGTCTCTAA+GGG 0.574043 3_1:+76260960 Msa0376220:CDS
TAGAAAGAGAAACCACATGC+TGG 0.575276 3_1:+76256310 Msa0376220:five_prime_UTR
TGTCCAAACTCTTTCAGAAG+TGG 0.576589 3_1:+76260777 Msa0376220:CDS
CAATTCTGCCTTTATACACG+TGG 0.578979 3_1:-76256355 None:intergenic
CAAGATGCATTGGCCAAGGA+AGG 0.579827 3_1:+76261000 Msa0376220:CDS
TATATTGTGGCACCTAGGCT+AGG 0.582126 3_1:-76261033 None:intergenic
GTCAACAACTACAAGATTGG+AGG 0.582200 3_1:+76259509 Msa0376220:CDS
GTGGAGAGGAGCTTCTCACA+TGG 0.586230 3_1:+76260707 Msa0376220:CDS
TTTGATCCGTAATCTTCCCA+AGG 0.586467 3_1:+76259662 Msa0376220:CDS
CCAACCTTCCCATCTCAACC+AGG 0.588199 3_1:+76260752 Msa0376220:CDS
AAAGAAGATTTCCCAAACAA+AGG 0.591284 3_1:-76258384 None:intergenic
AATAGTGTAATCAATGGAGA+TGG 0.592879 3_1:+76261187 Msa0376220:exon
TCTTCCCAAGGATTTAAGAA+GGG 0.597363 3_1:+76259674 Msa0376220:CDS
CAGTCCTGGTTGAGATGGGA+AGG 0.601072 3_1:-76260756 None:intergenic
CTCAAGGCCGGTGACTTCTG+TGG 0.604437 3_1:+76260688 Msa0376220:CDS
GCTCCAAGATGCATTGGCCA+AGG 0.607396 3_1:+76260996 Msa0376220:CDS
GAAAGCTGCATTGTTCGCGA+AGG 0.608012 3_1:+76260571 Msa0376220:CDS
CTTCAACTCTGAATACCTCA+AGG 0.608292 3_1:+76260672 Msa0376220:CDS
GATGCATTGGCCAAGGAAGG+TGG 0.608847 3_1:+76261003 Msa0376220:CDS
GGTGGTAGTTCACCTAGCCT+AGG 0.609619 3_1:+76261021 Msa0376220:CDS
AGCATTTGCTCTAAAAGCTG+AGG 0.610634 3_1:+76260801 Msa0376220:CDS
CTCGCAACAATGGCGTACAT+GGG 0.613114 3_1:+76260894 Msa0376220:CDS
GGCCGGTGACTTCTGTGGAG+AGG 0.614698 3_1:+76260693 Msa0376220:CDS
CCCTTCAATCTGGAGTTGTG+GGG 0.616232 3_1:+76256487 Msa0376220:five_prime_UTR
TGGAGAGGAGCTTCTCACAT+GGG 0.618857 3_1:+76260708 Msa0376220:CDS
AAGCATATATTGTGGCACCT+AGG 0.625095 3_1:-76261038 None:intergenic
AAACCTTGAAGCATATATTG+TGG 0.626481 3_1:-76261046 None:intergenic
GTCGAAGCTGCTTACTGTGA+AGG 0.630397 3_1:-76260855 None:intergenic
AAAGGAGAGACGCAGAACAG+TGG 0.631752 3_1:+76259544 Msa0376220:CDS
CTCCTCTCCACAGAAGTCAC+CGG 0.635029 3_1:-76260695 None:intergenic
CAACCTGCATATTTCCAATG+AGG 0.643448 3_1:-76258448 None:intergenic
GGCTTCTGGAGCATCATGGG+AGG 0.643524 3_1:-76261135 None:intergenic
GGAAGGTTGGATGCAGAACG+AGG 0.662339 3_1:-76260739 None:intergenic
TACAAATGGCAAGAAACTAG+AGG 0.662743 3_1:+76259624 Msa0376220:CDS
GTTTCATACAAGCAGCGTGG+AGG 0.671667 3_1:+76260923 Msa0376220:CDS
ACTCGTGAATGAAACTGGTG+CGG 0.677451 3_1:+76261408 Msa0376220:three_prime_UTR
TGAATAACGGTACCATACAA+GGG 0.682148 3_1:+76261523 Msa0376220:three_prime_UTR
GAGATGCTCTTCATAATGCG+CGG 0.685033 3_1:+76260607 Msa0376220:CDS
AAATGGCTCAAGGAAGCCCA+GGG 0.688785 3_1:+76261098 Msa0376220:CDS
CATGTTTCATACAAGCAGCG+TGG 0.689166 3_1:+76260920 Msa0376220:CDS
TTGACCGTGACAACAAACGG+TGG 0.747129 3_1:+76260637 Msa0376220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAAATTTTTTTATTGTTTT+TGG + chr3_1:76256526-76256545 Msa0376220:CDS 10.0%
!!! TTTTTATGTATATTGTAATT+AGG - chr3_1:76257079-76257098 None:intergenic 10.0%
!! AAAAATATGGAAAATAAATA+AGG + chr3_1:76257537-76257556 Msa0376220:intron 10.0%
!! AAAATATGGAAAATAAATAA+GGG + chr3_1:76257538-76257557 Msa0376220:intron 10.0%
!! AAAGAAATAATTAATGTATT+TGG + chr3_1:76257570-76257589 Msa0376220:intron 10.0%
!! AAAGAGTTATTAATATTATA+TGG - chr3_1:76260446-76260465 None:intergenic 10.0%
!! AACAATAAAAAAATTTCTGT+GGG - chr3_1:76256524-76256543 None:intergenic 15.0%
!! AAACAATAAAAAAATTTCTG+TGG - chr3_1:76256525-76256544 None:intergenic 15.0%
!!! AATTTTTTTATTGTTTTTGG+TGG + chr3_1:76256529-76256548 Msa0376220:CDS 15.0%
!!! ATTTTTTTATTGTTTTTGGT+GGG + chr3_1:76256530-76256549 Msa0376220:CDS 15.0%
!! TCTTTATTAATATATGCTAT+TGG + chr3_1:76256584-76256603 Msa0376220:intron 15.0%
!! AGAAAATTATGATAATAATG+TGG + chr3_1:76256969-76256988 Msa0376220:intron 15.0%
!! ATAAAAATTCTTAGAATTTG+GGG - chr3_1:76258038-76258057 None:intergenic 15.0%
!! CATAAAAATTCTTAGAATTT+GGG - chr3_1:76258039-76258058 None:intergenic 15.0%
!! TTAACAAAAAAAAAAAACCT+GGG - chr3_1:76258145-76258164 None:intergenic 15.0%
!! TTTAACAAAAAAAAAAAACC+TGG - chr3_1:76258146-76258165 None:intergenic 15.0%
!! AACATTTAAAAAATACTATG+GGG - chr3_1:76258251-76258270 None:intergenic 15.0%
!! CAACATTTAAAAAATACTAT+GGG - chr3_1:76258252-76258271 None:intergenic 15.0%
!! TCAACATTTAAAAAATACTA+TGG - chr3_1:76258253-76258272 None:intergenic 15.0%
!!! AATAATAGAGTCTTATATTT+TGG + chr3_1:76259123-76259142 Msa0376220:intron 15.0%
!!! ATAATAGAGTCTTATATTTT+GGG + chr3_1:76259124-76259143 Msa0376220:intron 15.0%
!! GGAAAAAATAGAAATATTTA+TGG - chr3_1:76259332-76259351 None:intergenic 15.0%
!! GATTGTATTTAAAAGATAAT+AGG - chr3_1:76259353-76259372 None:intergenic 15.0%
!! AATGTCAATGTAAATAAATA+AGG - chr3_1:76259381-76259400 None:intergenic 15.0%
!!! TTTTAAACTTGTTTTAATAC+AGG + chr3_1:76259759-76259778 Msa0376220:intron 15.0%
!!! AATGTAATTTTCTATTTTGA+GGG - chr3_1:76259916-76259935 None:intergenic 15.0%
!! AGCATTTAATAGAATATATT+AGG + chr3_1:76259973-76259992 Msa0376220:intron 15.0%
!! AATTAGAATGAAATTATGAT+AGG + chr3_1:76261260-76261279 Msa0376220:three_prime_UTR 15.0%
!! TATAGAAAACAAATACCAAA+AGG - chr3_1:76256292-76256311 None:intergenic 20.0%
!!! TTTTTTTATTGTTTTTGGTG+GGG + chr3_1:76256531-76256550 Msa0376220:CDS 20.0%
!!! TTGTTGATTGAAGAAAAATA+TGG + chr3_1:76257524-76257543 Msa0376220:intron 20.0%
!! ATGTATTTGGAAATAACAAA+AGG + chr3_1:76257583-76257602 Msa0376220:intron 20.0%
!! TGTATTTGGAAATAACAAAA+GGG + chr3_1:76257584-76257603 Msa0376220:intron 20.0%
!!! TCAAAAGAGTCTTATAATTA+GGG + chr3_1:76257634-76257653 Msa0376220:intron 20.0%
!! TCAAAGATAGATCTAATATT+GGG + chr3_1:76257679-76257698 Msa0376220:intron 20.0%
!! TTGGAAAATTATGTTAATTG+TGG + chr3_1:76257752-76257771 Msa0376220:intron 20.0%
!! CCATAAAAATTCTTAGAATT+TGG - chr3_1:76258040-76258059 None:intergenic 20.0%
!!! CCAAATTCTAAGAATTTTTA+TGG + chr3_1:76258037-76258056 Msa0376220:intron 20.0%
!!! ACTTTTCTTTCTATGTTAAT+GGG - chr3_1:76258078-76258097 None:intergenic 20.0%
!!! TACTTTTCTTTCTATGTTAA+TGG - chr3_1:76258079-76258098 None:intergenic 20.0%
!! TTAACATAGAAAGAAAAGTA+AGG + chr3_1:76258079-76258098 Msa0376220:intron 20.0%
!! ACATTTAAAAAATACTATGG+GGG - chr3_1:76258250-76258269 None:intergenic 20.0%
!!! TTGTTGATTTTGGAATAAAT+TGG + chr3_1:76258533-76258552 Msa0376220:intron 20.0%
!!! ATTTAATTTGATTTTCCCTT+TGG + chr3_1:76258729-76258748 Msa0376220:intron 20.0%
!!! TTTAATTTGATTTTCCCTTT+GGG + chr3_1:76258730-76258749 Msa0376220:intron 20.0%
!!! TTTTTGTAATTCTCTATGTA+TGG + chr3_1:76259258-76259277 Msa0376220:intron 20.0%
!!! TTTTGTAATTCTCTATGTAT+GGG + chr3_1:76259259-76259278 Msa0376220:intron 20.0%
!! AATAGAAATATTTATGGAAG+TGG - chr3_1:76259326-76259345 None:intergenic 20.0%
!! AATGTAAATAAATAAGGAAC+AGG - chr3_1:76259375-76259394 None:intergenic 20.0%
!! TTAAAACAAGTTTAAAAGAC+AGG - chr3_1:76259756-76259775 None:intergenic 20.0%
!!! GAATGTAATTTTCTATTTTG+AGG - chr3_1:76259917-76259936 None:intergenic 20.0%
!! AATATAGATACACTAAAACA+GGG - chr3_1:76259939-76259958 None:intergenic 20.0%
!! AAATATAGATACACTAAAAC+AGG - chr3_1:76259940-76259959 None:intergenic 20.0%
!!! TAGTGTATCTATATTTTGTT+TGG + chr3_1:76259944-76259963 Msa0376220:intron 20.0%
!! GTGTACGTTTAAAAAAAAAA+AGG + chr3_1:76260043-76260062 Msa0376220:intron 20.0%
!!! ATGATATTTTTAGTCCAAAA+TGG + chr3_1:76261481-76261500 Msa0376220:three_prime_UTR 20.0%
!! AACAAATGTCAAATGAATAA+CGG + chr3_1:76261510-76261529 Msa0376220:three_prime_UTR 20.0%
!! TAAAAGTGATAAACTGATAA+AGG - chr3_1:76261564-76261583 None:intergenic 20.0%
! TTTCTGATTTACTTCTTCAT+AGG + chr3_1:76256257-76256276 Msa0376220:five_prime_UTR 25.0%
! AAAAAATACCACGTGTATAA+AGG + chr3_1:76256347-76256366 Msa0376220:five_prime_UTR 25.0%
!! TTTTATCTGGATTCTGTATT+GGG - chr3_1:76256437-76256456 None:intergenic 25.0%
!! TTTTTATCTGGATTCTGTAT+TGG - chr3_1:76256438-76256457 None:intergenic 25.0%
!! AAATCAAAGAGCTTTTTATC+TGG - chr3_1:76256450-76256469 None:intergenic 25.0%
!!! GATAAAAAGCTCTTTGATTT+TGG + chr3_1:76256450-76256469 Msa0376220:five_prime_UTR 25.0%
!! CAATGTGTTTATGATTTTTG+TGG + chr3_1:76256637-76256656 Msa0376220:intron 25.0%
! TGTATATGTTCATGTTAACA+TGG + chr3_1:76256809-76256828 Msa0376220:intron 25.0%
! GTATATGTTCATGTTAACAT+GGG + chr3_1:76256810-76256829 Msa0376220:intron 25.0%
! AACTTGTGAAGGAAAAAAAA+GGG - chr3_1:76256878-76256897 None:intergenic 25.0%
! GATAATAATGTGGTAGAATT+TGG + chr3_1:76256979-76256998 Msa0376220:intron 25.0%
! TCTTAGCAATAATAAATCCA+AGG + chr3_1:76257029-76257048 Msa0376220:intron 25.0%
! ACGTTATAATTTAGTGTTGT+GGG + chr3_1:76257312-76257331 Msa0376220:intron 25.0%
! CATAAGTCCAAATTATAAGA+TGG + chr3_1:76257347-76257366 Msa0376220:intron 25.0%
! GGTAATACCATCTTATAATT+TGG - chr3_1:76257357-76257376 None:intergenic 25.0%
!! ATTCTCGTGATTTTATCAAA+AGG - chr3_1:76257400-76257419 None:intergenic 25.0%
!! GAAAATAAATAAGGGTATGT+TGG + chr3_1:76257546-76257565 Msa0376220:intron 25.0%
!! AACAAAAGGGTCTTATAAAA+AGG + chr3_1:76257597-76257616 Msa0376220:intron 25.0%
!! ACAAAAGGGTCTTATAAAAA+GGG + chr3_1:76257598-76257617 Msa0376220:intron 25.0%
!! CTCAAAAGAGTCTTATAATT+AGG + chr3_1:76257633-76257652 Msa0376220:intron 25.0%
! GTCAAAGATAGATCTAATAT+TGG + chr3_1:76257678-76257697 Msa0376220:intron 25.0%
! ATAGATATGACTTAAAGTAG+TGG + chr3_1:76257943-76257962 Msa0376220:intron 25.0%
! GTGAGTAAATTACATTCTTT+GGG + chr3_1:76258107-76258126 Msa0376220:intron 25.0%
! TGAGTAAATTACATTCTTTG+GGG + chr3_1:76258108-76258127 Msa0376220:intron 25.0%
!!! GGATTTTAAGTTTCCATATT+TGG - chr3_1:76258181-76258200 None:intergenic 25.0%
! CATTTAAAAAATACTATGGG+GGG - chr3_1:76258249-76258268 None:intergenic 25.0%
! CCAGCAAATATTAACAAAAA+GGG - chr3_1:76258592-76258611 None:intergenic 25.0%
! ACCAGCAAATATTAACAAAA+AGG - chr3_1:76258593-76258612 None:intergenic 25.0%
!! GACATGATCAAAATAAGTTT+TGG - chr3_1:76258708-76258727 None:intergenic 25.0%
!! GAAAAAGGACATCATATTTT+TGG + chr3_1:76258763-76258782 Msa0376220:intron 25.0%
!! TTTTGATATACTTATTGAGC+AGG + chr3_1:76258833-76258852 Msa0376220:intron 25.0%
! TTTGATATACTTATTGAGCA+GGG + chr3_1:76258834-76258853 Msa0376220:intron 25.0%
! AATATTTATGGAAGTGGAAA+AGG - chr3_1:76259320-76259339 None:intergenic 25.0%
! AGAATAACCCAATAATAGAA+TGG - chr3_1:76259433-76259452 None:intergenic 25.0%
! AGTTTAAAAGACAGGAAATA+TGG - chr3_1:76259748-76259767 None:intergenic 25.0%
!!! TGTATCTATATTTTGTTTGG+TGG + chr3_1:76259947-76259966 Msa0376220:intron 25.0%
! TTGCATTCAAATATATGCTA+CGG - chr3_1:76260119-76260138 None:intergenic 25.0%
! CTGTAAGAAAAGAAAAGAAA+TGG + chr3_1:76261220-76261239 Msa0376220:three_prime_UTR 25.0%
! AAATAACAAAACTGACATCT+TGG - chr3_1:76261290-76261309 None:intergenic 25.0%
! ACTAAAAATATCATCACCAT+CGG - chr3_1:76261475-76261494 None:intergenic 25.0%
!!! TCAGTTTATCACTTTTACAT+TGG + chr3_1:76261567-76261586 Msa0376220:three_prime_UTR 25.0%
TTTACTTCTTCATAGGTTCT+TGG + chr3_1:76256264-76256283 Msa0376220:five_prime_UTR 30.0%
TTGTATTGTGATGATCATCA+TGG + chr3_1:76256375-76256394 Msa0376220:five_prime_UTR 30.0%
AAGCAAACCTCAAATTCTTT+AGG - chr3_1:76256557-76256576 None:intergenic 30.0%
TTCACATCAACTTAGTAAAG+TGG - chr3_1:76256663-76256682 None:intergenic 30.0%
! AAAGAAGAGGAAAATGGTTT+TGG + chr3_1:76256709-76256728 Msa0376220:intron 30.0%
TCAACCAGGAATTATATTCT+TGG + chr3_1:76256841-76256860 Msa0376220:intron 30.0%
CAACCAGGAATTATATTCTT+GGG + chr3_1:76256842-76256861 Msa0376220:intron 30.0%
ATTCCCAAGAATATAATTCC+TGG - chr3_1:76256848-76256867 None:intergenic 30.0%
GAACTTGTGAAGGAAAAAAA+AGG - chr3_1:76256879-76256898 None:intergenic 30.0%
TATGTGAATTGAACTTGTGA+AGG - chr3_1:76256889-76256908 None:intergenic 30.0%
AATAATGTGGTAGAATTTGG+TGG + chr3_1:76256982-76257001 Msa0376220:intron 30.0%
TAGCAATAATAAATCCAAGG+AGG + chr3_1:76257032-76257051 Msa0376220:intron 30.0%
AAAGTAACTTCTATTCCTCT+TGG + chr3_1:76257128-76257147 Msa0376220:intron 30.0%
ATCAAAAGTTGACGCAATTA+AGG - chr3_1:76257187-76257206 None:intergenic 30.0%
CACGTTATAATTTAGTGTTG+TGG + chr3_1:76257311-76257330 Msa0376220:intron 30.0%
CGTTATAATTTAGTGTTGTG+GGG + chr3_1:76257313-76257332 Msa0376220:intron 30.0%
TCAAAAGGCTCTTATAATCA+GGG - chr3_1:76257385-76257404 None:intergenic 30.0%
ATCAAAAGGCTCTTATAATC+AGG - chr3_1:76257386-76257405 None:intergenic 30.0%
AAACAAACTCTGTCTCTTAA+AGG - chr3_1:76257483-76257502 None:intergenic 30.0%
! AAGAGTCTTATAATTAGGGA+TGG + chr3_1:76257638-76257657 Msa0376220:intron 30.0%
TAGGAGTTGTAATTAAGGAA+AGG - chr3_1:76257816-76257835 None:intergenic 30.0%
GTCATATCTATAGACAATGT+TGG - chr3_1:76257934-76257953 None:intergenic 30.0%
CGTGAGTAAATTACATTCTT+TGG + chr3_1:76258106-76258125 Msa0376220:intron 30.0%
AGAAACACTTGAACCAAATA+TGG + chr3_1:76258165-76258184 Msa0376220:intron 30.0%
TATGGAAACTTAAAATCCCA+AGG + chr3_1:76258183-76258202 Msa0376220:intron 30.0%
ATGCAAAAATATTCCCAGAA+AGG - chr3_1:76258212-76258231 None:intergenic 30.0%
AAGAATGTTAGACAGTAACT+TGG - chr3_1:76258291-76258310 None:intergenic 30.0%
AAAGAAGATTTCCCAAACAA+AGG - chr3_1:76258387-76258406 None:intergenic 30.0%
AAATAATACCAAACCAGCAA+TGG - chr3_1:76258423-76258442 None:intergenic 30.0%
GTATTATTTGCATTCCTCAT+TGG + chr3_1:76258434-76258453 Msa0376220:CDS 30.0%
AATCAGACAATAATTCAAGC+TGG + chr3_1:76258504-76258523 Msa0376220:intron 30.0%
!!! CTGGTACTATTTGTTGATTT+TGG + chr3_1:76258523-76258542 Msa0376220:intron 30.0%
TCAGGAGGAATATATAATAC+TGG - chr3_1:76258562-76258581 None:intergenic 30.0%
! CCCTTTTTGTTAATATTTGC+TGG + chr3_1:76258589-76258608 Msa0376220:intron 30.0%
!!! CTGGTTTTATGTCTTTCTTT+TGG + chr3_1:76258608-76258627 Msa0376220:intron 30.0%
! AAATATCAGTATGCGCTTTT+AGG + chr3_1:76258942-76258961 Msa0376220:intron 30.0%
!!! GTATGCATTTTTTCCTTAGA+AGG - chr3_1:76259150-76259169 None:intergenic 30.0%
CTTAATAAACACGAATTCAC+TGG - chr3_1:76259238-76259257 None:intergenic 30.0%
TTGAAAAATAGTTTGACACC+CGG + chr3_1:76259406-76259425 Msa0376220:intron 30.0%
!! TATGATGGATCAAATTGTTG+AGG - chr3_1:76259456-76259475 None:intergenic 30.0%
GGAAGAAAAATGAAGTATGA+TGG - chr3_1:76259471-76259490 None:intergenic 30.0%
! GACTGTAAATATGTCTGTTT+TGG - chr3_1:76259492-76259511 None:intergenic 30.0%
TTAAATCCTTGGGAAGATTA+CGG - chr3_1:76259671-76259690 None:intergenic 30.0%
TTATCTATCTGCGATTATAG+TGG + chr3_1:76259843-76259862 Msa0376220:intron 30.0%
!! ATCTATATTTTGTTTGGTGG+TGG + chr3_1:76259950-76259969 Msa0376220:intron 30.0%
TGCACAAACCTAACAAATAT+TGG + chr3_1:76260020-76260039 Msa0376220:intron 30.0%
GCACAAACCTAACAAATATT+GGG + chr3_1:76260021-76260040 Msa0376220:intron 30.0%
GATCAGCACTAATTCAAAAA+AGG - chr3_1:76260201-76260220 None:intergenic 30.0%
ATGGGAATTCAAAATACGAT+TGG + chr3_1:76260349-76260368 Msa0376220:intron 30.0%
TCATCCATCTTCTCAAATAT+TGG - chr3_1:76260499-76260518 None:intergenic 30.0%
!! AGTTTGTTGCATCTCAATTT+CGG + chr3_1:76260830-76260849 Msa0376220:CDS 30.0%
AAACCTTGAAGCATATATTG+TGG - chr3_1:76261049-76261068 None:intergenic 30.0%
AAGAGCAATAGTGTAATCAA+TGG + chr3_1:76261181-76261200 Msa0376220:exon 30.0%
AATAGTGTAATCAATGGAGA+TGG + chr3_1:76261187-76261206 Msa0376220:exon 30.0%
! TTTTCTTTTCTTACAGCACA+AGG - chr3_1:76261216-76261235 None:intergenic 30.0%
! CATTTGTTCTAGTACCATTT+TGG - chr3_1:76261498-76261517 None:intergenic 30.0%
! GTATTGTATTTTGTTGCCTA+GGG - chr3_1:76261760-76261779 None:intergenic 30.0%
! TGTATTGTATTTTGTTGCCT+AGG - chr3_1:76261761-76261780 None:intergenic 30.0%
TTCTTTGAACCAAGTCACAA+TGG - chr3_1:76256695-76256714 None:intergenic 35.0%
TGGTTCAAAGAAGAGGAAAA+TGG + chr3_1:76256703-76256722 Msa0376220:intron 35.0%
TTATTGTATCAAAGCCTCCT+TGG - chr3_1:76257049-76257068 None:intergenic 35.0%
TTGGAAAGCCACCTTAATTA+CGG + chr3_1:76257147-76257166 Msa0376220:intron 35.0%
TATAACGTGAGAAATGACTG+AGG - chr3_1:76257300-76257319 None:intergenic 35.0%
! AGTCTTATAATTAGGGATGG+AGG + chr3_1:76257641-76257660 Msa0376220:intron 35.0%
TCTTAGATCACGTAGAGATA+TGG + chr3_1:76257875-76257894 Msa0376220:intron 35.0%
GACTTAAAGTAGTGGTTATG+AGG + chr3_1:76257951-76257970 Msa0376220:intron 35.0%
! ATTCTTAGAATTTGGGGTTG+AGG - chr3_1:76258032-76258051 None:intergenic 35.0%
CCAAGAGAACTGCAATAAAA+AGG - chr3_1:76258344-76258363 None:intergenic 35.0%
! CCTTTTTATTGCAGTTCTCT+TGG + chr3_1:76258341-76258360 Msa0376220:intron 35.0%
! GCAATTTTCATTTCCATTGC+TGG + chr3_1:76258407-76258426 Msa0376220:CDS 35.0%
! TTTCATTTCCATTGCTGGTT+TGG + chr3_1:76258412-76258431 Msa0376220:CDS 35.0%
ATTCCTCATTGGAAATATGC+AGG + chr3_1:76258445-76258464 Msa0376220:CDS 35.0%
! AGTTTAAGACACACTAGCAA+AGG - chr3_1:76258973-76258992 None:intergenic 35.0%
TTGCTAGTGTGTCTTAAACT+AGG + chr3_1:76258973-76258992 Msa0376220:intron 35.0%
TGCTAGTGTGTCTTAAACTA+GGG + chr3_1:76258974-76258993 Msa0376220:intron 35.0%
ATCTTGTGGTATTATGACCT+GGG + chr3_1:76259093-76259112 Msa0376220:intron 35.0%
CTCTATTATTACAACATCCC+AGG - chr3_1:76259113-76259132 None:intergenic 35.0%
!! CTTATATTTTGGGCCTTCTA+AGG + chr3_1:76259134-76259153 Msa0376220:intron 35.0%
TGCAAGTGTTTCCTAGAATA+GGG + chr3_1:76259208-76259227 Msa0376220:intron 35.0%
TATGGAAGTGGAAAAGGAAT+AGG - chr3_1:76259314-76259333 None:intergenic 35.0%
AACCCAATAATAGAATGGTC+CGG - chr3_1:76259428-76259447 None:intergenic 35.0%
ACAGTCAACAACTACAAGAT+TGG + chr3_1:76259506-76259525 Msa0376220:CDS 35.0%
TACAAATGGCAAGAAACTAG+AGG + chr3_1:76259624-76259643 Msa0376220:CDS 35.0%
ATCTTCCCAAGGATTTAAGA+AGG + chr3_1:76259673-76259692 Msa0376220:CDS 35.0%
TCTTCCCAAGGATTTAAGAA+GGG + chr3_1:76259674-76259693 Msa0376220:CDS 35.0%
ATGTCCCTTCTTAAATCCTT+GGG - chr3_1:76259681-76259700 None:intergenic 35.0%
AATGTCCCTTCTTAAATCCT+TGG - chr3_1:76259682-76259701 None:intergenic 35.0%
ACGTACACCCAATATTTGTT+AGG - chr3_1:76260031-76260050 None:intergenic 35.0%
CATGTTCAAACAAATGACGT+GGG - chr3_1:76260158-76260177 None:intergenic 35.0%
ACATGTTCAAACAAATGACG+TGG - chr3_1:76260159-76260178 None:intergenic 35.0%
!! GTGCTGATCATGTTTTTAAC+TGG + chr3_1:76260212-76260231 Msa0376220:intron 35.0%
!! CTGATCATGTTTTTAACTGG+TGG + chr3_1:76260215-76260234 Msa0376220:intron 35.0%
!!! GGTGATTGGCTTATTTTTCA+AGG - chr3_1:76260386-76260405 None:intergenic 35.0%
TTCAAAGCTTCCAATAGCAA+CGG - chr3_1:76260407-76260426 None:intergenic 35.0%
TCTTTCTTGAACGAGATTTC+AGG + chr3_1:76260471-76260490 Msa0376220:intron 35.0%
CTTTCTTTCGTGTAAAGTAC+TGG - chr3_1:76260556-76260575 None:intergenic 35.0%
! TCAGATTTTACTCGCAACAA+TGG + chr3_1:76260884-76260903 Msa0376220:CDS 35.0%
TTCAGCAGTAAAATCTGGTT+CGG - chr3_1:76261163-76261182 None:intergenic 35.0%
! TTTTCACTCGTGAATGAAAC+TGG + chr3_1:76261403-76261422 Msa0376220:three_prime_UTR 35.0%
ATGAATAACGGTACCATACA+AGG + chr3_1:76261522-76261541 Msa0376220:three_prime_UTR 35.0%
TGAATAACGGTACCATACAA+GGG + chr3_1:76261523-76261542 Msa0376220:three_prime_UTR 35.0%
ACCATACAAGGGAAGAAATT+CGG + chr3_1:76261534-76261553 Msa0376220:three_prime_UTR 35.0%
CAAACAGATATTGTAACCCT+AGG + chr3_1:76261741-76261760 Msa0376220:three_prime_UTR 35.0%
TAGAAAGAGAAACCACATGC+TGG + chr3_1:76256310-76256329 Msa0376220:five_prime_UTR 40.0%
CAATTCTGCCTTTATACACG+TGG - chr3_1:76256358-76256377 None:intergenic 40.0%
!! TGTGACTTGGTTCAAAGAAG+AGG + chr3_1:76256696-76256715 Msa0376220:intron 40.0%
! AATTTTCCCTCTTCTTGAGG+CGG - chr3_1:76256756-76256775 None:intergenic 40.0%
CCTCAAGAAGAGGGAAAATT+GGG + chr3_1:76256756-76256775 Msa0376220:intron 40.0%
CTCAAGAAGAGGGAAAATTG+GGG + chr3_1:76256757-76256776 Msa0376220:intron 40.0%
TCAAGAAGAGGGAAAATTGG+GGG + chr3_1:76256758-76256777 Msa0376220:intron 40.0%
AATTAAGGTGGCTTTCCAAG+AGG - chr3_1:76257146-76257165 None:intergenic 40.0%
CTTGAGACACACCGTAATTA+AGG - chr3_1:76257161-76257180 None:intergenic 40.0%
AAGGCTCTTATAATCAGGGA+AGG - chr3_1:76257381-76257400 None:intergenic 40.0%
CAAAATTTCCGCAAGTAAGG+CGG - chr3_1:76257789-76257808 None:intergenic 40.0%
AGCCAAAATTTCCGCAAGTA+AGG - chr3_1:76257792-76257811 None:intergenic 40.0%
GGAGCTAGGAGTTGTAATTA+AGG - chr3_1:76257821-76257840 None:intergenic 40.0%
CTTCATTGTGTTGAGTGTGA+GGG + chr3_1:76257840-76257859 Msa0376220:intron 40.0%
TTCATTGTGTTGAGTGTGAG+GGG + chr3_1:76257841-76257860 Msa0376220:intron 40.0%
! ACTAGCTTGTAAGGTGAACT+CGG - chr3_1:76257991-76258010 None:intergenic 40.0%
! ACCTTACAAGCTAGTTTGTG+AGG + chr3_1:76257996-76258015 Msa0376220:intron 40.0%
! CTAGTTTGTGAGGCTGAATT+AGG + chr3_1:76258006-76258025 Msa0376220:intron 40.0%
TTGGGGAATCAATAATACCC+AGG + chr3_1:76258125-76258144 Msa0376220:intron 40.0%
!! AAACAAAGGTACTTGTTGCC+AGG - chr3_1:76258373-76258392 None:intergenic 40.0%
TGGCAACAAGTACCTTTGTT+TGG + chr3_1:76258372-76258391 Msa0376220:CDS 40.0%
! GGCAACAAGTACCTTTGTTT+GGG + chr3_1:76258373-76258392 Msa0376220:CDS 40.0%
CAACCTGCATATTTCCAATG+AGG - chr3_1:76258451-76258470 None:intergenic 40.0%
CTCATTGGAAATATGCAGGT+TGG + chr3_1:76258449-76258468 Msa0376220:intron 40.0%
AACAAAAAGGGACAGATCTC+AGG - chr3_1:76258580-76258599 None:intergenic 40.0%
TTTCTTGAGAGTCTCCCAAA+GGG - chr3_1:76258747-76258766 None:intergenic 40.0%
! TTTTCTTGAGAGTCTCCCAA+AGG - chr3_1:76258748-76258767 None:intergenic 40.0%
TTGGGAGACTCTCAAGAAAA+AGG + chr3_1:76258748-76258767 Msa0376220:intron 40.0%
GCACTTTGCTACAATTACAG+TGG + chr3_1:76258793-76258812 Msa0376220:intron 40.0%
TTTAGGTCTCACCCATCATT+GGG - chr3_1:76258865-76258884 None:intergenic 40.0%
!! TTTTAGGTCTCACCCATCAT+TGG - chr3_1:76258866-76258885 None:intergenic 40.0%
!! GACCTAAAACTAGCTTTGAG+AGG + chr3_1:76258877-76258896 Msa0376220:intron 40.0%
!!! CTCCTCTCAAAGCTAGTTTT+AGG - chr3_1:76258882-76258901 None:intergenic 40.0%
!! AAACTAGCTTTGAGAGGAGT+TGG + chr3_1:76258883-76258902 Msa0376220:intron 40.0%
!! AACTAGCTTTGAGAGGAGTT+GGG + chr3_1:76258884-76258903 Msa0376220:intron 40.0%
AGCAAAAAGACCACACATGA+TGG - chr3_1:76258918-76258937 None:intergenic 40.0%
CAAAAAGAGGACCAACACAA+GGG - chr3_1:76259014-76259033 None:intergenic 40.0%
!! CTTGTGTTGGTCCTCTTTTT+GGG + chr3_1:76259013-76259032 Msa0376220:intron 40.0%
!! TTGTGTTGGTCCTCTTTTTG+GGG + chr3_1:76259014-76259033 Msa0376220:intron 40.0%
! CTCTCGTGGAACTATTTTCT+GGG + chr3_1:76259050-76259069 Msa0376220:intron 40.0%
! TCTCGTGGAACTATTTTCTG+GGG + chr3_1:76259051-76259070 Msa0376220:intron 40.0%
GATCTTGTGGTATTATGACC+TGG + chr3_1:76259092-76259111 Msa0376220:intron 40.0%
! ATTCTAGGAAACACTTGCAG+AGG - chr3_1:76259207-76259226 None:intergenic 40.0%
CTGCAAGTGTTTCCTAGAAT+AGG + chr3_1:76259207-76259226 Msa0376220:intron 40.0%
ACCCGGACCATTCTATTATT+GGG + chr3_1:76259423-76259442 Msa0376220:intron 40.0%
ACCCAATAATAGAATGGTCC+GGG - chr3_1:76259427-76259446 None:intergenic 40.0%
GTCAACAACTACAAGATTGG+AGG + chr3_1:76259509-76259528 Msa0376220:CDS 40.0%
TTCTTTCTCTCAAGTGGTCA+GGG - chr3_1:76259587-76259606 None:intergenic 40.0%
ATTCTTTCTCTCAAGTGGTC+AGG - chr3_1:76259588-76259607 None:intergenic 40.0%
GTCTGATTCTTTCTCTCAAG+TGG - chr3_1:76259593-76259612 None:intergenic 40.0%
GACGACATGAGCAATACAAA+TGG + chr3_1:76259610-76259629 Msa0376220:CDS 40.0%
TTTGATCCGTAATCTTCCCA+AGG + chr3_1:76259662-76259681 Msa0376220:CDS 40.0%
AATTCCCATGATTCTTCACC+AGG - chr3_1:76260338-76260357 None:intergenic 40.0%
GGTGCCAATATTTGAGAAGA+TGG + chr3_1:76260492-76260511 Msa0376220:intron 40.0%
! GAAGATGGATGAGCAACTTT+TGG + chr3_1:76260507-76260526 Msa0376220:CDS 40.0%
!! ATGAAGAGCATCTCATCAAC+AGG - chr3_1:76260601-76260620 None:intergenic 40.0%
TTGTTGACCGTGACAACAAA+CGG + chr3_1:76260634-76260653 Msa0376220:CDS 40.0%
CTTCAACTCTGAATACCTCA+AGG + chr3_1:76260672-76260691 Msa0376220:CDS 40.0%
TGTCCAAACTCTTTCAGAAG+TGG + chr3_1:76260777-76260796 Msa0376220:CDS 40.0%
! CTTCCACTTCTGAAAGAGTT+TGG - chr3_1:76260783-76260802 None:intergenic 40.0%
!! AGCATTTGCTCTAAAAGCTG+AGG + chr3_1:76260801-76260820 Msa0376220:CDS 40.0%
AAGCATATATTGTGGCACCT+AGG - chr3_1:76261041-76261060 None:intergenic 40.0%
GTGCCACAATATATGCTTCA+AGG + chr3_1:76261043-76261062 Msa0376220:CDS 40.0%
! CATTTTTACGTATGGCTCGA+AGG - chr3_1:76261083-76261102 None:intergenic 40.0%
CTTCGAGCCATACGTAAAAA+TGG + chr3_1:76261081-76261100 Msa0376220:CDS 40.0%
!!! CCTTGAGCCATTTTTACGTA+TGG - chr3_1:76261091-76261110 None:intergenic 40.0%
CCATACGTAAAAATGGCTCA+AGG + chr3_1:76261088-76261107 Msa0376220:CDS 40.0%
TGCTCTTCAGCAGTAAAATC+TGG - chr3_1:76261168-76261187 None:intergenic 40.0%
!! CTGTTTTTCGCACTTTGTGA+TGG + chr3_1:76261449-76261468 Msa0376220:three_prime_UTR 40.0%
CCATACAAGGGAAGAAATTC+GGG + chr3_1:76261535-76261554 Msa0376220:three_prime_UTR 40.0%
!!! CATAGGTTCTTGGTGCCTTT+TGG + chr3_1:76256274-76256293 Msa0376220:five_prime_UTR 45.0%
AGAAACCACATGCTGGCAAA+GGG + chr3_1:76256317-76256336 Msa0376220:five_prime_UTR 45.0%
! GTATTGGGCATGAAGCATTC+AGG - chr3_1:76256422-76256441 None:intergenic 45.0%
TTCCTTGATGCCCTTCAATC+TGG + chr3_1:76256477-76256496 Msa0376220:five_prime_UTR 45.0%
ATATGTACCGCCTCAAGAAG+AGG + chr3_1:76256746-76256765 Msa0376220:intron 45.0%
TATGTACCGCCTCAAGAAGA+GGG + chr3_1:76256747-76256766 Msa0376220:intron 45.0%
GCCTCAAGAAGAGGGAAAAT+TGG + chr3_1:76256755-76256774 Msa0376220:intron 45.0%
! CCCAATTTTCCCTCTTCTTG+AGG - chr3_1:76256759-76256778 None:intergenic 45.0%
CATGGGCATTTGTTTCAACC+AGG + chr3_1:76256827-76256846 Msa0376220:intron 45.0%
GAGACACACCGTAATTAAGG+TGG - chr3_1:76257158-76257177 None:intergenic 45.0%
ACTACTCAAGCTACATCGCT+AGG - chr3_1:76257268-76257287 None:intergenic 45.0%
TTAGTGTTGTGGGGTTGAGA+TGG + chr3_1:76257322-76257341 Msa0376220:intron 45.0%
GCTCTTATAATCAGGGAAGG+AGG - chr3_1:76257378-76257397 None:intergenic 45.0%
! CGCCTTACTTGCGGAAATTT+TGG + chr3_1:76257787-76257806 Msa0376220:intron 45.0%
CTCAACACAATGAAGGAGCT+AGG - chr3_1:76257835-76257854 None:intergenic 45.0%
CCTCACACTCAACACAATGA+AGG - chr3_1:76257842-76257861 None:intergenic 45.0%
CCTTCATTGTGTTGAGTGTG+AGG + chr3_1:76257839-76257858 Msa0376220:intron 45.0%
! GCCTCACAAACTAGCTTGTA+AGG - chr3_1:76258000-76258019 None:intergenic 45.0%
AAATCCCAAGGTCACCTTTC+TGG + chr3_1:76258195-76258214 Msa0376220:intron 45.0%
AATCCCAAGGTCACCTTTCT+GGG + chr3_1:76258196-76258215 Msa0376220:intron 45.0%
ATTCCCAGAAAGGTGACCTT+GGG - chr3_1:76258202-76258221 None:intergenic 45.0%
TATTCCCAGAAAGGTGACCT+TGG - chr3_1:76258203-76258222 None:intergenic 45.0%
ATTATTCCTCCACCCTCTTG+TGG + chr3_1:76258313-76258332 Msa0376220:intron 45.0%
TTATTCCTCCACCCTCTTGT+GGG + chr3_1:76258314-76258333 Msa0376220:intron 45.0%
AAAAAGGATCCCCCACAAGA+GGG - chr3_1:76258328-76258347 None:intergenic 45.0%
TAAAAAGGATCCCCCACAAG+AGG - chr3_1:76258329-76258348 None:intergenic 45.0%
AAAAAGGGACAGATCTCAGG+AGG - chr3_1:76258577-76258596 None:intergenic 45.0%
TATACTTATTGAGCAGGGCC+AGG + chr3_1:76258839-76258858 Msa0376220:intron 45.0%
GACCACACATGATGGCAAAA+AGG - chr3_1:76258910-76258929 None:intergenic 45.0%
TAATTGTCCCACCCTTGTGT+TGG + chr3_1:76259000-76259019 Msa0376220:intron 45.0%
CCAAAAAGAGGACCAACACA+AGG - chr3_1:76259015-76259034 None:intergenic 45.0%
!! CCTTGTGTTGGTCCTCTTTT+TGG + chr3_1:76259012-76259031 Msa0376220:intron 45.0%
TTCATCCACTCCCCAAAAAG+AGG - chr3_1:76259027-76259046 None:intergenic 45.0%
! GCTCTCGTGGAACTATTTTC+TGG + chr3_1:76259049-76259068 Msa0376220:intron 45.0%
!!! ACTATTTTCTGGGGCTGTTC+TGG + chr3_1:76259060-76259079 Msa0376220:intron 45.0%
!!! CTATTTTCTGGGGCTGTTCT+GGG + chr3_1:76259061-76259080 Msa0376220:intron 45.0%
!!! TATTTTCTGGGGCTGTTCTG+GGG + chr3_1:76259062-76259081 Msa0376220:intron 45.0%
!! TCACTGGTTCACCCTATTCT+AGG - chr3_1:76259222-76259241 None:intergenic 45.0%
CACCCGGACCATTCTATTAT+TGG + chr3_1:76259422-76259441 Msa0376220:intron 45.0%
TGGAGGAGATGAGAGTGAAA+AGG + chr3_1:76259526-76259545 Msa0376220:CDS 45.0%
CATTAAGCGTCATCTCTGCT+TGG + chr3_1:76259698-76259717 Msa0376220:CDS 45.0%
!! TCTATTTTGAGGGACCTGCT+AGG - chr3_1:76259906-76259925 None:intergenic 45.0%
TTTGTGAATGCCATGCTTCC+TGG + chr3_1:76260317-76260336 Msa0376220:intron 45.0%
TGATTCTTCACCAGGAAGCA+TGG - chr3_1:76260330-76260349 None:intergenic 45.0%
TGCTTCCTGGTGAAGAATCA+TGG + chr3_1:76260330-76260349 Msa0376220:intron 45.0%
GCTTCCTGGTGAAGAATCAT+GGG + chr3_1:76260331-76260350 Msa0376220:intron 45.0%
AAGCCAATCACCGTTGCTAT+TGG + chr3_1:76260394-76260413 Msa0376220:intron 45.0%
CTTCCAATAGCAACGGTGAT+TGG - chr3_1:76260400-76260419 None:intergenic 45.0%
GAGATGCTCTTCATAATGCG+CGG + chr3_1:76260607-76260626 Msa0376220:CDS 45.0%
!! TCTTCCACCGTTTGTTGTCA+CGG - chr3_1:76260644-76260663 None:intergenic 45.0%
GACAACAAACGGTGGAAGAA+CGG + chr3_1:76260645-76260664 Msa0376220:CDS 45.0%
ACAACAAACGGTGGAAGAAC+GGG + chr3_1:76260646-76260665 Msa0376220:CDS 45.0%
AACTCTGAATACCTCAAGGC+CGG + chr3_1:76260676-76260695 Msa0376220:CDS 45.0%
TGAAAGAGTTTGGACAGTCC+TGG - chr3_1:76260773-76260792 None:intergenic 45.0%
CATGTTTCATACAAGCAGCG+TGG + chr3_1:76260920-76260939 Msa0376220:CDS 45.0%
AGAAGCTCGAAGAGTCTCTA+AGG + chr3_1:76260959-76260978 Msa0376220:CDS 45.0%
GAAGCTCGAAGAGTCTCTAA+GGG + chr3_1:76260960-76260979 Msa0376220:CDS 45.0%
! CTCTAAGGGAAGAGGAGAAT+AGG + chr3_1:76260974-76260993 Msa0376220:CDS 45.0%
GAATAGGCTCCAAGATGCAT+TGG + chr3_1:76260990-76261009 Msa0376220:CDS 45.0%
TATATTGTGGCACCTAGGCT+AGG - chr3_1:76261036-76261055 None:intergenic 45.0%
!! GCAGTAAAATCTGGTTCGGT+AGG - chr3_1:76261159-76261178 None:intergenic 45.0%
ACTCGTGAATGAAACTGGTG+CGG + chr3_1:76261408-76261427 Msa0376220:three_prime_UTR 45.0%
CCCGAATTTCTTCCCTTGTA+TGG - chr3_1:76261538-76261557 None:intergenic 45.0%
GAGAAACCACATGCTGGCAA+AGG + chr3_1:76256316-76256335 Msa0376220:five_prime_UTR 50.0%
!! CTCCAGATTGAAGGGCATCA+AGG - chr3_1:76256482-76256501 None:intergenic 50.0%
! TGCCCTTCAATCTGGAGTTG+TGG + chr3_1:76256485-76256504 Msa0376220:five_prime_UTR 50.0%
! GCCCTTCAATCTGGAGTTGT+GGG + chr3_1:76256486-76256505 Msa0376220:five_prime_UTR 50.0%
CCCCACAACTCCAGATTGAA+GGG - chr3_1:76256490-76256509 None:intergenic 50.0%
! CCCTTCAATCTGGAGTTGTG+GGG + chr3_1:76256487-76256506 Msa0376220:five_prime_UTR 50.0%
ACCCCACAACTCCAGATTGA+AGG - chr3_1:76256491-76256510 None:intergenic 50.0%
! ATCTGGAGTTGTGGGGTCAA+TGG + chr3_1:76256494-76256513 Msa0376220:exon 50.0%
GGTGGGGCCTAAAGAATTTG+AGG + chr3_1:76256547-76256566 Msa0376220:CDS 50.0%
CTATGAGCGCCATTGTGACT+TGG + chr3_1:76256683-76256702 Msa0376220:intron 50.0%
TGCCTTCATTGCCTCCTTCA+TGG + chr3_1:76257207-76257226 Msa0376220:intron 50.0%
GCCTTCATTGCCTCCTTCAT+GGG + chr3_1:76257208-76257227 Msa0376220:intron 50.0%
ACCCATGAAGGAGGCAATGA+AGG - chr3_1:76257212-76257231 None:intergenic 50.0%
GCTACATCGCTAGGTGATGT+GGG - chr3_1:76257259-76257278 None:intergenic 50.0%
AGCTACATCGCTAGGTGATG+TGG - chr3_1:76257260-76257279 None:intergenic 50.0%
CACTTGCATTGTGACACTCC+AGG + chr3_1:76257703-76257722 Msa0376220:intron 50.0%
GGCTTGAGTAGTGCAAGTGA+AGG + chr3_1:76257896-76257915 Msa0376220:intron 50.0%
GTTATGAGGCCTGACTGCAT+GGG + chr3_1:76257965-76257984 Msa0376220:intron 50.0%
TATTCCTCCACCCTCTTGTG+GGG + chr3_1:76258315-76258334 Msa0376220:intron 50.0%
CAGTTCTCTTGGTCAGAACC+TGG + chr3_1:76258352-76258371 Msa0376220:intron 50.0%
! GGCCTTTTTGCCATCATGTG+TGG + chr3_1:76258905-76258924 Msa0376220:intron 50.0%
AAGAGGACCAACACAAGGGT+GGG - chr3_1:76259010-76259029 None:intergenic 50.0%
AAAGAGGACCAACACAAGGG+TGG - chr3_1:76259011-76259030 None:intergenic 50.0%
!! TTGGTCCTCTTTTTGGGGAG+TGG + chr3_1:76259019-76259038 Msa0376220:intron 50.0%
GAGTGGATGAAAAGCTCTCG+TGG + chr3_1:76259036-76259055 Msa0376220:intron 50.0%
CTGGGGAAGTAGTGATCTTG+TGG + chr3_1:76259079-76259098 Msa0376220:intron 50.0%
AGGAAACACTTGCAGAGGCA+AGG - chr3_1:76259202-76259221 None:intergenic 50.0%
AAAGGAGAGACGCAGAACAG+TGG + chr3_1:76259544-76259563 Msa0376220:CDS 50.0%
!! TCTGCTTGGCTTTGCTGATG+AGG + chr3_1:76259712-76259731 Msa0376220:CDS 50.0%
!! CTGCTTGGCTTTGCTGATGA+GGG + chr3_1:76259713-76259732 Msa0376220:CDS 50.0%
GTCTGTCCATAATGCCTAGC+AGG + chr3_1:76259889-76259908 Msa0376220:intron 50.0%
GAAAGCTGCATTGTTCGCGA+AGG + chr3_1:76260571-76260590 Msa0376220:CDS 50.0%
TTGACCGTGACAACAAACGG+TGG + chr3_1:76260637-76260656 Msa0376220:CDS 50.0%
TGGAGAGGAGCTTCTCACAT+GGG + chr3_1:76260708-76260727 Msa0376220:CDS 50.0%
TGGACAGTCCTGGTTGAGAT+GGG - chr3_1:76260763-76260782 None:intergenic 50.0%
TTGGACAGTCCTGGTTGAGA+TGG - chr3_1:76260764-76260783 None:intergenic 50.0%
GTCGAAGCTGCTTACTGTGA+AGG - chr3_1:76260858-76260877 None:intergenic 50.0%
ACTCGCAACAATGGCGTACA+TGG + chr3_1:76260893-76260912 Msa0376220:CDS 50.0%
CTCGCAACAATGGCGTACAT+GGG + chr3_1:76260894-76260913 Msa0376220:CDS 50.0%
GTTTCATACAAGCAGCGTGG+AGG + chr3_1:76260923-76260942 Msa0376220:CDS 50.0%
! CGAAGAGTCTCTAAGGGAAG+AGG + chr3_1:76260966-76260985 Msa0376220:CDS 50.0%
CTTCCTTGGCCAATGCATCT+TGG - chr3_1:76261002-76261021 None:intergenic 50.0%
! CAAGATGCATTGGCCAAGGA+AGG + chr3_1:76261000-76261019 Msa0376220:CDS 50.0%
AGGTGAACTACCACCTTCCT+TGG - chr3_1:76261016-76261035 None:intergenic 50.0%
AAAATGGCTCAAGGAAGCCC+AGG + chr3_1:76261097-76261116 Msa0376220:CDS 50.0%
AAATGGCTCAAGGAAGCCCA+GGG + chr3_1:76261098-76261117 Msa0376220:CDS 50.0%
ATCATGGGAGGTAGTCTCTC+TGG - chr3_1:76261126-76261145 None:intergenic 50.0%
!! GTAGGCTTCTGGAGCATCAT+GGG - chr3_1:76261141-76261160 None:intergenic 50.0%
!! AATCTGGTTCGGTAGGCTTC+TGG - chr3_1:76261152-76261171 None:intergenic 50.0%
ACAAGCCCTTTGCCAGCATG+TGG - chr3_1:76256325-76256344 None:intergenic 55.0%
ACACTCCAGGCCCATAGCTT+GGG + chr3_1:76257716-76257735 Msa0376220:intron 55.0%
TTCCGCAAGTAAGGCGGCTA+GGG - chr3_1:76257783-76257802 None:intergenic 55.0%
TTTCCGCAAGTAAGGCGGCT+AGG - chr3_1:76257784-76257803 None:intergenic 55.0%
GGTTATGAGGCCTGACTGCA+TGG + chr3_1:76257964-76257983 Msa0376220:intron 55.0%
ATTCCTCCACCCTCTTGTGG+GGG + chr3_1:76258316-76258335 Msa0376220:intron 55.0%
GAGGGACCTGCTAGGCATTA+TGG - chr3_1:76259898-76259917 None:intergenic 55.0%
CTCCTCTCCACAGAAGTCAC+CGG - chr3_1:76260698-76260717 None:intergenic 55.0%
GTGGAGAGGAGCTTCTCACA+TGG + chr3_1:76260707-76260726 Msa0376220:CDS 55.0%
GGAAGGTTGGATGCAGAACG+AGG - chr3_1:76260742-76260761 None:intergenic 55.0%
CCTGGTTGAGATGGGAAGGT+TGG - chr3_1:76260755-76260774 None:intergenic 55.0%
CCAACCTTCCCATCTCAACC+AGG + chr3_1:76260752-76260771 Msa0376220:CDS 55.0%
CAGTCCTGGTTGAGATGGGA+AGG - chr3_1:76260759-76260778 None:intergenic 55.0%
TCATACAAGCAGCGTGGAGG+CGG + chr3_1:76260926-76260945 Msa0376220:CDS 55.0%
! GCTCCAAGATGCATTGGCCA+AGG + chr3_1:76260996-76261015 Msa0376220:CDS 55.0%
! GATGCATTGGCCAAGGAAGG+TGG + chr3_1:76261003-76261022 Msa0376220:CDS 55.0%
GGTGGTAGTTCACCTAGCCT+AGG + chr3_1:76261021-76261040 Msa0376220:CDS 55.0%
!! GGTAGGCTTCTGGAGCATCA+TGG - chr3_1:76261142-76261161 None:intergenic 55.0%
TCGCACTTTGTGATGGCCGA+TGG + chr3_1:76261456-76261475 Msa0376220:three_prime_UTR 55.0%
TTGCCTCCTTCATGGGTGCG+AGG + chr3_1:76257215-76257234 Msa0376220:intron 60.0%
TCTCCTCGCACCCATGAAGG+AGG - chr3_1:76257221-76257240 None:intergenic 60.0%
CCTTCATGGGTGCGAGGAGA+CGG + chr3_1:76257221-76257240 Msa0376220:intron 60.0%
CTTCATGGGTGCGAGGAGAC+GGG + chr3_1:76257222-76257241 Msa0376220:intron 60.0%
GACACTCCAGGCCCATAGCT+TGG + chr3_1:76257715-76257734 Msa0376220:intron 60.0%
TCATGCCCAAGCTATGGGCC+TGG - chr3_1:76257724-76257743 None:intergenic 60.0%
GGCCCATAGCTTGGGCATGA+CGG + chr3_1:76257724-76257743 Msa0376220:intron 60.0%
GCCCATAGCTTGGGCATGAC+GGG + chr3_1:76257725-76257744 Msa0376220:intron 60.0%
CCCCGTCATGCCCAAGCTAT+GGG - chr3_1:76257729-76257748 None:intergenic 60.0%
CCCATAGCTTGGGCATGACG+GGG + chr3_1:76257726-76257745 Msa0376220:intron 60.0%
ACCCCGTCATGCCCAAGCTA+TGG - chr3_1:76257730-76257749 None:intergenic 60.0%
! CTTGGGCATGACGGGGTTGT+TGG + chr3_1:76257733-76257752 Msa0376220:intron 60.0%
TCCCCTAGCCGCCTTACTTG+CGG + chr3_1:76257778-76257797 Msa0376220:intron 60.0%
TCCGCAAGTAAGGCGGCTAG+GGG - chr3_1:76257782-76257801 None:intergenic 60.0%
TGAACTCGGCCCATGCAGTC+AGG - chr3_1:76257977-76257996 None:intergenic 60.0%
AAGGATCCCCCACAAGAGGG+TGG - chr3_1:76258325-76258344 None:intergenic 60.0%
GTCTCACCCATCATTGGGCC+TGG - chr3_1:76258860-76258879 None:intergenic 60.0%
CACAGAAGTCACCGGCCTTG+AGG - chr3_1:76260690-76260709 None:intergenic 60.0%
CTCAAGGCCGGTGACTTCTG+TGG + chr3_1:76260688-76260707 Msa0376220:CDS 60.0%
GGTAGTCTCTCTGGCACCCT+GGG - chr3_1:76261117-76261136 None:intergenic 60.0%
AGGTAGTCTCTCTGGCACCC+TGG - chr3_1:76261118-76261137 None:intergenic 60.0%
!! GGCTTCTGGAGCATCATGGG+AGG - chr3_1:76261138-76261157 None:intergenic 60.0%
CCGTCTCCTCGCACCCATGA+AGG - chr3_1:76257224-76257243 None:intergenic 65.0%
GATCCCCCACAAGAGGGTGG+AGG - chr3_1:76258322-76258341 None:intergenic 65.0%
AGCAGGGCCAGGCCCAATGA+TGG + chr3_1:76258850-76258869 Msa0376220:intron 65.0%
GCAGGGCCAGGCCCAATGAT+GGG + chr3_1:76258851-76258870 Msa0376220:intron 65.0%
GGCCGGTGACTTCTGTGGAG+AGG + chr3_1:76260693-76260712 Msa0376220:CDS 65.0%
CATGGGTGCGAGGAGACGGG+AGG + chr3_1:76257225-76257244 Msa0376220:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 76256249 76261794 76256249 ID=Msa0376220;Name=Msa0376220
chr3_1 mRNA 76256249 76261794 76256249 ID=Msa0376220-mRNA-1;Parent=Msa0376220;Name=Msa0376220-mRNA-1;_AED=0.04;_eAED=0.04;_QI=264|1|1|1|1|1|4|603|367
chr3_1 exon 76256249 76256568 76256249 ID=Msa0376220-mRNA-1:exon:18001;Parent=Msa0376220-mRNA-1
chr3_1 exon 76258355 76258466 76258355 ID=Msa0376220-mRNA-1:exon:18002;Parent=Msa0376220-mRNA-1
chr3_1 exon 76259498 76259734 76259498 ID=Msa0376220-mRNA-1:exon:18003;Parent=Msa0376220-mRNA-1
chr3_1 exon 76260493 76261794 76260493 ID=Msa0376220-mRNA-1:exon:18004;Parent=Msa0376220-mRNA-1
chr3_1 five_prime_UTR 76256249 76256512 76256249 ID=Msa0376220-mRNA-1:five_prime_utr;Parent=Msa0376220-mRNA-1
chr3_1 CDS 76256513 76256568 76256513 ID=Msa0376220-mRNA-1:cds;Parent=Msa0376220-mRNA-1
chr3_1 CDS 76258355 76258466 76258355 ID=Msa0376220-mRNA-1:cds;Parent=Msa0376220-mRNA-1
chr3_1 CDS 76259498 76259734 76259498 ID=Msa0376220-mRNA-1:cds;Parent=Msa0376220-mRNA-1
chr3_1 CDS 76260493 76261191 76260493 ID=Msa0376220-mRNA-1:cds;Parent=Msa0376220-mRNA-1
chr3_1 three_prime_UTR 76261192 76261794 76261192 ID=Msa0376220-mRNA-1:three_prime_utr;Parent=Msa0376220-mRNA-1
Gene Sequence

>Msa0376220

ATGGACTTCCCACAGAAATTTTTTTATTGTTTTTGGTGGGGCCTAAAGAATTTGAGTTCTCTTGGTCAGAACCTGGCAACAAGTACCTTTGTTTGGGAAATCTTCTTTGCAATTTTCATTTCCATTGCTGGTTTGGTATTATTTGCATTCCTCATTGGAAATATGCAGACATATTTACAGTCAACAACTACAAGATTGGAGGAGATGAGAGTGAAAAGGAGAGACGCAGAACAGTGGATGTCACATCGACTACTCCCTGACCACTTGAGAGAAAGAATCAGACGACATGAGCAATACAAATGGCAAGAAACTAGAGGAGTTGATGAAGACAATTTGATCCGTAATCTTCCCAAGGATTTAAGAAGGGACATTAAGCGTCATCTCTGCTTGGCTTTGCTGATGAGGGTGCCAATATTTGAGAAGATGGATGAGCAACTTTTGGATGCAGTGTGTGACTGTCTCAAACCAGTACTTTACACGAAAGAAAGCTGCATTGTTCGCGAAGGAGATCCTGTTGATGAGATGCTCTTCATAATGCGCGGCAAATTGTTGACCGTGACAACAAACGGTGGAAGAACGGGTTTCTTCAACTCTGAATACCTCAAGGCCGGTGACTTCTGTGGAGAGGAGCTTCTCACATGGGCATTAGATCCTCGTTCTGCATCCAACCTTCCCATCTCAACCAGGACTGTCCAAACTCTTTCAGAAGTGGAAGCATTTGCTCTAAAAGCTGAGGATTTGAAGTTTGTTGCATCTCAATTTCGGCGCCTTCACAGTAAGCAGCTTCGACACACTTTCAGATTTTACTCGCAACAATGGCGTACATGGGCTGCATGTTTCATACAAGCAGCGTGGAGGCGGTATTGTAAAAAGAAGCTCGAAGAGTCTCTAAGGGAAGAGGAGAATAGGCTCCAAGATGCATTGGCCAAGGAAGGTGGTAGTTCACCTAGCCTAGGTGCCACAATATATGCTTCAAGGTTTGCTGCAAATGTCCTTCGAGCCATACGTAAAAATGGCTCAAGGAAGCCCAGGGTGCCAGAGAGACTACCTCCCATGATGCTCCAGAAGCCTACCGAACCAGATTTTACTGCTGAAGAGCAATAG
Protein sequence

>Msa0376220

MDFPQKFFYCFWWGLKNLSSLGQNLATSTFVWEIFFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDHLRERIRRHEQYKWQETRGVDEDNLIRNLPKDLRRDIKRHLCLALLMRVPIFEKMDEQLLDAVCDCLKPVLYTKESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPRSASNLPISTRTVQTLSEVEAFALKAEDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCKKKLEESLREEENRLQDALAKEGGSSPSLGATIYASRFAANVLRAIRKNGSRKPRVPERLPPMMLQKPTEPDFTAEEQ*