AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0379240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379240 MtrunA17_Chr3g0131631 97.216 970 24 2 1 968 1 969 0.0 1936
Msa0379240 MtrunA17_Chr8g0385721 68.486 971 285 13 1 956 1 965 0.0 1275
Msa0379240 MtrunA17_Chr7g0221461 41.800 811 358 25 153 937 79 801 2.30e-170 517
Msa0379240 MtrunA17_Chr2g0304041 42.439 820 341 25 160 913 66 820 5.08e-157 484
Msa0379240 MtrunA17_Chr7g0276301 34.483 667 292 19 170 815 27 569 2.02e-87 291
Msa0379240 MtrunA17_Chr3g0096561 47.305 334 145 7 137 443 46 375 3.54e-74 261
Msa0379240 MtrunA17_Chr3g0096561 53.020 298 120 7 658 944 561 849 5.28e-74 261
Msa0379240 MtrunA17_Chr7g0276291 56.204 137 33 2 824 937 5 137 5.10e-42 150
Msa0379240 MtrunA17_Chr3g0123391 45.890 146 67 1 790 923 333 478 1.96e-34 139
Msa0379240 MtrunA17_Chr3g0123391 28.646 192 112 7 282 451 59 247 5.38e-15 79.0
Msa0379240 MtrunA17_Chr5g0428671 56.637 113 49 0 309 421 1 113 2.17e-34 127
Msa0379240 MtrunA17_Chr5g0423961 55.752 113 50 0 309 421 1 113 2.58e-34 127
Msa0379240 MtrunA17_Chr4g0035711 38.095 126 64 2 793 904 188 313 3.94e-17 84.0
Msa0379240 MtrunA17_Chr2g0288251 24.870 193 116 5 262 426 141 332 7.64e-12 68.6
Msa0379240 MtrunA17_Chr4g0074711 25.281 178 110 5 270 425 168 344 9.75e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379240 AT5G61960.3 46.885 979 429 23 1 958 1 909 0.0 691
Msa0379240 AT5G61960.1 46.885 979 429 23 1 958 1 909 0.0 691
Msa0379240 AT5G61960.10 46.885 979 429 23 1 958 1 909 0.0 691
Msa0379240 AT5G61960.2 46.885 979 429 23 1 958 1 909 0.0 691
Msa0379240 AT5G61960.7 50.472 848 379 17 132 958 75 902 0.0 682
Msa0379240 AT5G61960.4 50.472 848 379 17 132 958 75 902 0.0 682
Msa0379240 AT5G61960.8 50.472 848 379 17 132 958 75 902 0.0 682
Msa0379240 AT5G61960.11 50.472 848 379 17 132 958 75 902 0.0 682
Msa0379240 AT5G61960.6 50.472 848 379 17 132 958 75 902 0.0 682
Msa0379240 AT5G61960.9 50.472 848 379 17 132 958 75 902 0.0 682
Msa0379240 AT5G61960.5 50.472 848 379 17 132 958 75 902 0.0 682
Msa0379240 AT5G07290.1 49.242 792 367 17 187 959 131 906 0.0 654
Msa0379240 AT2G42890.1 37.726 774 379 22 181 915 94 803 2.31e-120 388
Msa0379240 AT2G42890.3 37.726 774 379 22 181 915 81 790 3.01e-120 387
Msa0379240 AT2G42890.2 37.726 774 379 22 181 915 81 790 3.01e-120 387
Msa0379240 AT1G29400.1 46.547 333 151 6 114 427 2 326 5.77e-77 269
Msa0379240 AT1G29400.1 56.107 262 97 6 654 906 514 766 5.35e-71 252
Msa0379240 AT1G29400.2 46.547 333 151 6 114 427 2 326 5.77e-77 269
Msa0379240 AT1G29400.2 56.107 262 97 6 654 906 514 766 5.35e-71 252
Msa0379240 AT1G29400.3 46.547 333 151 6 114 427 2 326 5.77e-77 269
Msa0379240 AT1G29400.3 56.107 262 97 6 654 906 514 766 5.35e-71 252
Msa0379240 AT3G26120.1 42.308 156 68 2 790 925 405 558 2.34e-31 131
Msa0379240 AT3G26120.1 28.571 182 108 1 268 427 105 286 3.00e-18 90.1
Msa0379240 AT1G67770.1 40.506 158 75 4 778 916 320 477 5.29e-27 117
Msa0379240 AT1G67770.1 25.281 178 115 1 268 427 79 256 5.09e-16 82.8
Msa0379240 AT5G07930.1 36.975 119 61 2 790 895 132 249 3.70e-17 83.6
Msa0379240 AT5G07930.2 39.048 105 51 1 790 881 132 236 4.65e-17 82.8
Msa0379240 AT5G07930.3 36.975 119 61 2 790 895 132 249 6.15e-17 83.2
Msa0379240 AT1G37140.1 39.048 105 58 2 792 890 83 187 1.33e-15 77.8

Find 268 sgRNAs with CRISPR-Local

Find 523 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAGCTCATATGGTTTAAT+TGG 0.114750 3_1:+80231017 Msa0379240:CDS
TTAACTGAAGCTTAAAATTT+TGG 0.135436 3_1:+80236173 Msa0379240:three_prime_UTR
TAATCATCATGAATAGATTT+TGG 0.178888 3_1:-80230076 None:intergenic
CATTCATCAGGCTTGAATTC+TGG 0.185196 3_1:-80235285 None:intergenic
AAAATAGGACATTGAGTTCT+AGG 0.193390 3_1:+80232005 Msa0379240:CDS
GAAACGAGGGCTCACAATTT+TGG 0.213621 3_1:+80236012 Msa0379240:three_prime_UTR
ATTAAAATGGCTGCCAATAT+TGG 0.228444 3_1:+80233322 Msa0379240:CDS
ATTTCTCTTTCTATAATTTC+TGG 0.240924 3_1:+80229770 Msa0379240:five_prime_UTR
TTGGAAGGAGATGAACTTTC+AGG 0.248781 3_1:+80231613 Msa0379240:CDS
GTGAATAATTCTGATATTAA+AGG 0.256488 3_1:-80228759 None:intergenic
GAAACACATTCTTACACTTT+TGG 0.261999 3_1:-80231112 None:intergenic
TTTCATTGCATCGACATTAC+TGG 0.276263 3_1:-80233209 None:intergenic
TCAAGGGAATTCTTCAACTT+TGG 0.278731 3_1:+80235813 Msa0379240:CDS
TTTAAAGGCAAAAGTTCTTT+TGG 0.281264 3_1:+80231682 Msa0379240:CDS
GTGAGCATTGGCGTCTTTAT+AGG 0.289961 3_1:+80236320 Msa0379240:three_prime_UTR
TTTGTCAAACACCATTAAAA+TGG 0.296917 3_1:+80233309 Msa0379240:CDS
CAATGAAAGCACTTCAAAAT+AGG 0.318732 3_1:+80231990 Msa0379240:CDS
TGTGGATCCAGTTCCAATAT+TGG 0.320691 3_1:-80233335 None:intergenic
ATCTGATGGCAGGCATATTC+AGG 0.322437 3_1:+80233363 Msa0379240:CDS
AAATTGAGGCTGACACTATA+GGG 0.330989 3_1:+80231464 Msa0379240:CDS
GGTCGCTCTCTGGTTTGGTT+TGG 0.331373 3_1:-80228637 None:intergenic
TGTTTGTTCTTCCAGCAATA+TGG 0.333713 3_1:+80231884 Msa0379240:intron
TGCCAAACCACAGCATTTGA+TGG 0.337784 3_1:-80233972 None:intergenic
ATACTTACTTTGAAATCAAT+TGG 0.341793 3_1:-80234934 None:intergenic
TGCAGAGGAATGTTGGATTA+AGG 0.349422 3_1:+80230050 Msa0379240:intron
GACATTGAGTTCTAGGAAAC+TGG 0.351184 3_1:+80232012 Msa0379240:CDS
ATAATTTCTGGATAAGCTAT+AGG 0.351986 3_1:+80229782 Msa0379240:five_prime_UTR
AACGTTTATCTTCATTCATC+AGG 0.355362 3_1:-80235297 None:intergenic
TCTGGTGGAAGCTTGGAAAA+TGG 0.356454 3_1:+80233055 Msa0379240:CDS
TTGAATGGAATGTGCATTGC+TGG 0.364414 3_1:+80232548 Msa0379240:CDS
GATGGTGATCCTGCTTACTC+TGG 0.364672 3_1:+80231655 Msa0379240:CDS
GAAATTGAGGCTGACACTAT+AGG 0.368667 3_1:+80231463 Msa0379240:CDS
TTTACAGCCGGACTATCTTC+TGG 0.371912 3_1:+80233022 Msa0379240:intron
GAAGTTTCTCATTCGTTCAT+TGG 0.372044 3_1:-80234387 None:intergenic
GATGCTTGGAGGCAGTATAA+AGG 0.373437 3_1:-80231919 None:intergenic
TCTTGGTGCAGTGAGGTTCT+TGG 0.376145 3_1:+80231366 Msa0379240:intron
GCTTCTCTCCGTTCATTGAA+TGG 0.377977 3_1:+80232533 Msa0379240:CDS
GCATCTGCTGTAAAAGTATC+TGG 0.382259 3_1:+80233181 Msa0379240:CDS
ATTCAGGGAATGATCTCAAC+TGG 0.382922 3_1:+80233379 Msa0379240:CDS
CTCTGGTTCATTATTTCAAA+AGG 0.388319 3_1:-80229808 None:intergenic
TCCCCGACAACTCTCATCTA+TGG 0.390546 3_1:-80234890 None:intergenic
TCTTCTGGAGTTATTGCATC+TGG 0.393243 3_1:+80233037 Msa0379240:CDS
CTTGGTGCAGTGAGGTTCTT+GGG 0.393851 3_1:+80231367 Msa0379240:intron
CCATCTGTATGGAATAGAAT+AGG 0.393946 3_1:-80235325 None:intergenic
GGAGAGTCTCCTGATGCTCC+TGG 0.395092 3_1:+80234161 Msa0379240:CDS
ATGGTGTTTGACAAATTGTA+AGG 0.398111 3_1:-80233301 None:intergenic
TCGCCGGTCGCTCTCTGGTT+TGG 0.399046 3_1:-80228642 None:intergenic
ACAAAAGATCTCATGATGTT+TGG 0.402289 3_1:-80228852 None:intergenic
AAAGAATGAGGGTGCAATCT+TGG 0.404397 3_1:-80233244 None:intergenic
CTTGCATATGCCCGAATTCA+AGG 0.407186 3_1:+80235238 Msa0379240:CDS
GAGGTTGAAGAGACAGAAAA+TGG 0.408460 3_1:-80228702 None:intergenic
ATGGCTGCCAATATTGGAAC+TGG 0.408530 3_1:+80233328 Msa0379240:CDS
GTTAATGGCGTTGGTTCTCC+TGG 0.409145 3_1:+80234011 Msa0379240:CDS
TATGCTCGCCGGTCGCTCTC+TGG 0.409598 3_1:-80228647 None:intergenic
TCCGGTGTCACTGATGGTTT+AGG 0.412288 3_1:+80231517 Msa0379240:CDS
CTAGCTCATATGGTTTAATT+GGG 0.413117 3_1:+80231018 Msa0379240:CDS
CATGGTACACTGATGATATC+TGG 0.414020 3_1:+80232285 Msa0379240:CDS
CAGCCAGCATCTAGCTCATA+TGG 0.414663 3_1:+80231008 Msa0379240:CDS
TGAAGGTCGAGGTACATAAC+TGG 0.418769 3_1:+80236061 Msa0379240:three_prime_UTR
TACTCTAATATTTGCACCTA+AGG 0.418869 3_1:-80235746 None:intergenic
TTTACCGGATCACCAGCATT+TGG 0.420008 3_1:-80235349 None:intergenic
GTCATCCTAGGATTGCAATA+TGG 0.422477 3_1:+80232594 Msa0379240:CDS
AACAAGATTGTCACCAATGC+AGG 0.425656 3_1:+80231041 Msa0379240:CDS
GGAAAGACAACATTCTTACT+TGG 0.427204 3_1:+80234139 Msa0379240:CDS
AATCCTACAGAGAAGGATAT+TGG 0.433618 3_1:+80232261 Msa0379240:CDS
AATCTAAAACCAGGAGCATC+AGG 0.433903 3_1:-80234170 None:intergenic
AGGAAACATCATCATAAAGA+TGG 0.434351 3_1:-80229852 None:intergenic
ATGTCACAGACTAGTTTATC+CGG 0.437906 3_1:+80230873 Msa0379240:CDS
TGGATCAGCACCAGTTGTTA+CGG 0.438451 3_1:+80234106 Msa0379240:CDS
GGATCAGCACCAGTTGTTAC+GGG 0.445097 3_1:+80234107 Msa0379240:CDS
CATAACAAACCCACGATGCT+TGG 0.445998 3_1:-80231933 None:intergenic
CTCCATCAAATGCTGTGGTT+TGG 0.447636 3_1:+80233970 Msa0379240:CDS
TATCGTGATGGTTTAGCTAA+TGG 0.450083 3_1:+80233274 Msa0379240:CDS
TGCAAATATTAGAGTAAGGC+CGG 0.450326 3_1:+80235753 Msa0379240:CDS
CAGCATATGAGCCGGTGTCC+TGG 0.451181 3_1:-80234057 None:intergenic
GCTTTCACGTGCGCCTGCAT+TGG 0.451678 3_1:-80231054 None:intergenic
TATGACTCAGCCATCTCAAA+AGG 0.452052 3_1:+80232869 Msa0379240:CDS
CCCCACGCGATATGCGGCCT+AGG 0.456030 3_1:-80234469 None:intergenic
CAGGGTGATCCCGTAACAAC+TGG 0.456473 3_1:-80234116 None:intergenic
TGAATTATCACCCGAGATCA+TGG 0.457507 3_1:+80230970 Msa0379240:CDS
ATGGTGATCCTGCTTACTCT+GGG 0.457648 3_1:+80231656 Msa0379240:CDS
CAGCATTTGGACCATCTGTA+TGG 0.458360 3_1:-80235336 None:intergenic
GGAGAAGTTTAACAGTGAAA+AGG 0.460631 3_1:+80235207 Msa0379240:CDS
ATCATCAGCTTTATCATATG+TGG 0.460895 3_1:+80233922 Msa0379240:CDS
TATTGCATCTGGTGGAAGCT+TGG 0.460934 3_1:+80233048 Msa0379240:CDS
GATTTGTATGGTTCTTCCTC+AGG 0.464347 3_1:-80231433 None:intergenic
GAAGTCATGGGAAGTCTCCC+AGG 0.464747 3_1:-80234344 None:intergenic
ACGATTTGACATCCAGTGTT+GGG 0.466653 3_1:+80234288 Msa0379240:CDS
ATTTCTTCAAGAGATTTGTA+TGG 0.466918 3_1:-80231445 None:intergenic
CATCTGTATGGAATAGAATA+GGG 0.468346 3_1:-80235324 None:intergenic
AAAAGGAGGTGTGTGTTAGT+TGG 0.468735 3_1:-80228520 None:intergenic
ATGCTTGGAGGCAGTATAAA+GGG 0.471188 3_1:-80231918 None:intergenic
TGATTTCTTACTATGACCTA+AGG 0.471450 3_1:+80231954 Msa0379240:CDS
TTGGGTTCTCTAGGAAATGC+AGG 0.471896 3_1:+80234191 Msa0379240:CDS
GGACAAGATGAACCTGATCT+TGG 0.472838 3_1:+80232891 Msa0379240:CDS
CAGTTGTCACATGTCTTCCC+TGG 0.473042 3_1:+80234326 Msa0379240:CDS
ACATATGATAAAGCTGATGA+TGG 0.473859 3_1:-80233920 None:intergenic
ATTGTGCATTGTGTGTTTCA+AGG 0.474559 3_1:+80236231 Msa0379240:three_prime_UTR
CTATATGTTGGGATTGTTGA+AGG 0.476578 3_1:+80236351 Msa0379240:three_prime_UTR
CATTGAACTGTTAGTGCTTG+AGG 0.478549 3_1:-80235907 None:intergenic
GAGAGAAGAGTTGGAGCAGC+CGG 0.478751 3_1:+80235986 Msa0379240:three_prime_UTR
AAATTTCGACATTGAAGTCA+TGG 0.479844 3_1:-80234357 None:intergenic
CAAATCTCTTGAAGAAATTG+AGG 0.479991 3_1:+80231450 Msa0379240:CDS
GATAAACTAGTCTGTGACAT+TGG 0.480263 3_1:-80230870 None:intergenic
TTTCATGTGCAGAGGAATGT+TGG 0.480325 3_1:+80230043 Msa0379240:intron
AGCATATGAGCCGGTGTCCT+GGG 0.483499 3_1:-80234056 None:intergenic
AGTGAAATGGCAGCTTCACC+TGG 0.484170 3_1:+80230795 Msa0379240:CDS
AAGGCAGCTGTGATGCAGAT+AGG 0.484556 3_1:-80233093 None:intergenic
TGGTCCAAATGCTGGTGATC+CGG 0.486226 3_1:+80235345 Msa0379240:CDS
GATTTGTTCAGCAGTGGTGG+AGG 0.487187 3_1:+80231583 Msa0379240:CDS
TATTTGATATGATTCATCTC+TGG 0.487550 3_1:-80232479 None:intergenic
AAACCAAACCAGAGAGCGAC+CGG 0.490438 3_1:+80228639 Msa0379240:five_prime_UTR
AGCCATAGATGAGAGTTGTC+GGG 0.490777 3_1:+80234888 Msa0379240:CDS
TGGAGGCAGTATAAAGGGTT+CGG 0.491188 3_1:-80231913 None:intergenic
AGCCACCATATTGCAATCCT+AGG 0.491608 3_1:-80232599 None:intergenic
AGGTTGAAGAGACAGAAAAT+GGG 0.491647 3_1:-80228701 None:intergenic
GTAAGAATGTTGTCTTTCCC+AGG 0.492218 3_1:-80234135 None:intergenic
ATATTTGCACCTAAGGGAAA+AGG 0.492250 3_1:-80235739 None:intergenic
CTAGGCATCTGAGGAAGACC+AGG 0.494575 3_1:-80234029 None:intergenic
GATAGCGAGAAATACTTGTT+GGG 0.496306 3_1:-80234527 None:intergenic
TGTGTGAGAGAGAGAAGAGT+TGG 0.498399 3_1:+80235977 Msa0379240:three_prime_UTR
TGAGCTAAAGGCTCTCTTTG+AGG 0.498928 3_1:+80231762 Msa0379240:CDS
TTGTGCATTGTGTGTTTCAA+GGG 0.499777 3_1:+80236232 Msa0379240:three_prime_UTR
GCAGTGAGGTTCTTGGGAAA+TGG 0.500531 3_1:+80231373 Msa0379240:intron
TGCAGAAGACTCTGAGCTAA+AGG 0.500582 3_1:+80231750 Msa0379240:CDS
TGCACATCAGACCATGATCT+CGG 0.501021 3_1:-80230981 None:intergenic
CTCAGATGCCTAGCTTTCCC+AGG 0.501075 3_1:+80234039 Msa0379240:CDS
AATAATTACCTCAGAAGCAT+AGG 0.505187 3_1:-80229872 None:intergenic
AGATGCCCCTCTTGCGGTGT+TGG 0.505306 3_1:-80233164 None:intergenic
TTGAGATTATGACCAAGATC+AGG 0.507730 3_1:-80232903 None:intergenic
CATACAGATGGTCCAAATGC+TGG 0.508760 3_1:+80235337 Msa0379240:CDS
CAGCCATAGATGAGAGTTGT+CGG 0.511525 3_1:+80234887 Msa0379240:CDS
TTTGATTTGTTCAGCAGTGG+TGG 0.512433 3_1:+80231580 Msa0379240:CDS
GAAAACAGATCATCTTCGTC+AGG 0.512761 3_1:-80231496 None:intergenic
AAACTTGTAAGATGGTAGAA+TGG 0.514669 3_1:-80236138 None:intergenic
CATATGATAAAGCTGATGAT+GGG 0.516748 3_1:-80233919 None:intergenic
TCTATGGTGAAACATTGATA+AGG 0.517049 3_1:+80228938 Msa0379240:five_prime_UTR
TTGCAGAACAAGTGTAATGT+TGG 0.517297 3_1:+80235031 Msa0379240:intron
TGAATTCCTTATGCTGTAGA+CGG 0.518987 3_1:+80228878 Msa0379240:five_prime_UTR
AAGACATGTGACAACTGCTT+AGG 0.520883 3_1:-80234320 None:intergenic
CCACAGAAGCATCTGATGGC+AGG 0.521735 3_1:+80233353 Msa0379240:CDS
CCAACGCCATTAACAAAAGA+TGG 0.523153 3_1:-80234002 None:intergenic
CGATACTCAGGCAAAGAATG+AGG 0.523522 3_1:-80233256 None:intergenic
TTCATCAACATGATTGATCC+TGG 0.523625 3_1:+80235061 Msa0379240:CDS
CATCTTATTCTTAAGACAGA+AGG 0.524749 3_1:+80232929 Msa0379240:CDS
GTCTCTCTAAACTTGTAAGA+TGG 0.527628 3_1:-80236146 None:intergenic
GAAGAGTAGAGGCGAATCTC+CGG 0.527693 3_1:-80228679 None:intergenic
TGTGAGCCCTCGTTTCCTAC+CGG 0.528611 3_1:-80236005 None:intergenic
TAGGTGCAAATATTAGAGTA+AGG 0.529396 3_1:+80235749 Msa0379240:CDS
TCTCAAGTAACCTGGTGGAA+TGG 0.531415 3_1:-80235094 None:intergenic
AGCTTGAACCTGGTCATCCT+AGG 0.535589 3_1:+80232582 Msa0379240:CDS
AAGCAGATCAAGCTTGAACC+TGG 0.538364 3_1:+80232572 Msa0379240:CDS
GTTCAGCAGTGGTGGAGGCA+TGG 0.539659 3_1:+80231588 Msa0379240:CDS
AAACCATATGAGCTAGATGC+TGG 0.540798 3_1:-80231011 None:intergenic
TACAGCAGATGCCCCTCTTG+CGG 0.541207 3_1:-80233170 None:intergenic
TTGACATCCAGTGTTGGGCA+TGG 0.541362 3_1:+80234293 Msa0379240:CDS
AACGATTTGACATCCAGTGT+TGG 0.541528 3_1:+80234287 Msa0379240:CDS
AAAAGAATCAGTGGCTTGGA+TGG 0.542438 3_1:+80231637 Msa0379240:CDS
CAGCTTTATCATATGTGGAA+TGG 0.542662 3_1:+80233927 Msa0379240:CDS
CCTGCCATCAGATGCTTCTG+TGG 0.542912 3_1:-80233353 None:intergenic
AGGAGAGCCATGCCCAACAC+TGG 0.543846 3_1:-80234300 None:intergenic
CAGTGGTGGAGGCATGGAGT+TGG 0.544371 3_1:+80231594 Msa0379240:CDS
GGAAACATCATCATAAAGAT+GGG 0.545230 3_1:-80229851 None:intergenic
TTCAACAAAGCTAGCAAGTG+AGG 0.546113 3_1:+80229732 Msa0379240:five_prime_UTR
ACTCTAATATTTGCACCTAA+GGG 0.547386 3_1:-80235745 None:intergenic
GGCGAGGTTGTTATGCTCGC+CGG 0.548863 3_1:-80228658 None:intergenic
ATGACTCAGCCATCTCAAAA+GGG 0.550864 3_1:+80232870 Msa0379240:CDS
AACAAACCCACGATGCTTGG+AGG 0.551442 3_1:-80231930 None:intergenic
TAGCTGGCAGTTGCATCCTC+CGG 0.553694 3_1:+80234223 Msa0379240:CDS
TGTCACAGACTAGTTTATCC+GGG 0.553964 3_1:+80230874 Msa0379240:CDS
ACCTAGGCCGCATATCGCGT+GGG 0.553997 3_1:+80234468 Msa0379240:CDS
TCTGATCAGAATATTACTGC+TGG 0.554637 3_1:+80231403 Msa0379240:CDS
AATAACTCCAGAAGATAGTC+CGG 0.556410 3_1:-80233029 None:intergenic
AACATGTTGCTTGAAAGATC+CGG 0.556555 3_1:-80234242 None:intergenic
TTCAACTTTGGCAAATGCAG+AGG 0.557116 3_1:+80235825 Msa0379240:CDS
TTGTTTGTATCCGTGAGCAT+TGG 0.557529 3_1:+80236308 Msa0379240:three_prime_UTR
TCTGATGGCAGGCATATTCA+GGG 0.557958 3_1:+80233364 Msa0379240:CDS
CTGGGAAAGCTAGGCATCTG+AGG 0.559188 3_1:-80234038 None:intergenic
TTGAAGAATTCCCTTGACTA+CGG 0.559870 3_1:-80235807 None:intergenic
TTAAAAGCCCCAGAGTAAGC+AGG 0.560466 3_1:-80231664 None:intergenic
AACGAGGAGAGCCGTAGTCA+AGG 0.561117 3_1:+80235796 Msa0379240:CDS
GAAAGACAACATTCTTACTT+GGG 0.563473 3_1:+80234140 Msa0379240:CDS
AAGCAGTAGTAACACCCCTC+TGG 0.563767 3_1:-80229825 None:intergenic
GCACATCAGACCATGATCTC+GGG 0.565376 3_1:-80230980 None:intergenic
AATTTCGACATTGAAGTCAT+GGG 0.565453 3_1:-80234356 None:intergenic
AGTATTTCCAACACCGCAAG+AGG 0.565609 3_1:+80233157 Msa0379240:CDS
GACCTAGGCCGCATATCGCG+TGG 0.567782 3_1:+80234467 Msa0379240:CDS
ACGAGGAGAGCCGTAGTCAA+GGG 0.569069 3_1:+80235797 Msa0379240:CDS
TCTGGAGTTATTGCATCTGG+TGG 0.571797 3_1:+80233040 Msa0379240:CDS
TCTTTGCCTGAGTATCGTGA+TGG 0.573141 3_1:+80233262 Msa0379240:CDS
ACACACAATGCACAATCTCA+AGG 0.573153 3_1:-80236224 None:intergenic
GCCGGTGTCCTGGGAAAGCT+AGG 0.574300 3_1:-80234047 None:intergenic
ATCTGATATTGCAATGTGGA+AGG 0.579100 3_1:+80228811 Msa0379240:five_prime_UTR
TACTGCTGGTTCTCTTCCTG+AGG 0.579244 3_1:+80231417 Msa0379240:CDS
GCAAATATTAGAGTAAGGCC+GGG 0.579550 3_1:+80235754 Msa0379240:CDS
ATACTGCCTCCAAGCATCGT+GGG 0.580674 3_1:+80231924 Msa0379240:CDS
TATAAAGACGCCAATGCTCA+CGG 0.583042 3_1:-80236318 None:intergenic
ATCTTATTCTTAAGACAGAA+GGG 0.583393 3_1:+80232930 Msa0379240:CDS
AGTTGTTACGGGATCACCCT+GGG 0.584532 3_1:+80234118 Msa0379240:CDS
TGTCTTCCCCACGCGATATG+CGG 0.585805 3_1:-80234475 None:intergenic
TGGCATGGTAGATGCGCTGA+AGG 0.585812 3_1:+80230932 Msa0379240:CDS
ACAGATCATCTTCGTCAGGA+AGG 0.587444 3_1:-80231492 None:intergenic
TATACGTTATTCAATTCCAA+AGG 0.587943 3_1:+80232036 Msa0379240:CDS
ACAGAAAATGGGAAGAGTAG+AGG 0.588010 3_1:-80228690 None:intergenic
TGGAATGGAATTATTTGACC+AGG 0.588103 3_1:-80235079 None:intergenic
AGTTGTCACATGTCTTCCCT+GGG 0.589289 3_1:+80234327 Msa0379240:CDS
GATTTCTTACTATGACCTAA+GGG 0.592591 3_1:+80231955 Msa0379240:CDS
CCGGGAAAATTACGTAGTAG+TGG 0.594703 3_1:+80235772 Msa0379240:CDS
TGCACATTCCATTCAATGAA+CGG 0.594988 3_1:-80232541 None:intergenic
GCTAAACCATCACGATACTC+AGG 0.595277 3_1:-80233268 None:intergenic
TGGCCAATATCCTTCTCTGT+AGG 0.595679 3_1:-80232264 None:intergenic
CCTATTCTATTCCATACAGA+TGG 0.596105 3_1:+80235325 Msa0379240:CDS
TATACTGCCTCCAAGCATCG+TGG 0.596726 3_1:+80231923 Msa0379240:CDS
ATTGCAATGTGGAAGGAACA+AGG 0.596793 3_1:+80228818 Msa0379240:five_prime_UTR
TCAAATAATTCCATTCCACC+AGG 0.598283 3_1:+80235084 Msa0379240:CDS
TATGTTGGGATTGTTGAAGG+AGG 0.599181 3_1:+80236354 Msa0379240:three_prime_UTR
GGAGCAGCCGGTAGGAAACG+AGG 0.600020 3_1:+80235998 Msa0379240:three_prime_UTR
TCACATATTGAACACCATGT+TGG 0.601494 3_1:+80234086 Msa0379240:CDS
AGATGCGCTGAAGGATTCAA+AGG 0.602052 3_1:+80230941 Msa0379240:CDS
TCCTAAACCATCAGTGACAC+CGG 0.604371 3_1:-80231518 None:intergenic
TAAGAATGTTGTCTTTCCCA+GGG 0.605754 3_1:-80234134 None:intergenic
GATCATGGTCTGATGTGCAT+AGG 0.608179 3_1:+80230985 Msa0379240:CDS
GGCGAGCATAACAACCTCGC+CGG 0.608997 3_1:+80228660 Msa0379240:five_prime_UTR
AAACAATTTGAACTCGACCT+AGG 0.609109 3_1:+80234452 Msa0379240:CDS
TGATGTTTCCTATGCTTCTG+AGG 0.609927 3_1:+80229864 Msa0379240:CDS
ATACAATGACGGAGTTGACA+TGG 0.611021 3_1:-80235937 None:intergenic
ATTGCAATCCTAGGATGACC+AGG 0.613668 3_1:-80232590 None:intergenic
TCAGTGTCTCTTGAAGAACT+TGG 0.613951 3_1:-80235874 None:intergenic
GATACTCAGGCAAAGAATGA+GGG 0.614189 3_1:-80233255 None:intergenic
TTAGGGAAATCCTACAGAGA+AGG 0.614924 3_1:+80232254 Msa0379240:intron
CAGTTGTTACGGGATCACCC+TGG 0.615223 3_1:+80234117 Msa0379240:CDS
GAAGAGTTGGAGCAGCCGGT+AGG 0.617689 3_1:+80235990 Msa0379240:three_prime_UTR
TAAAATGTAATATACAATGA+CGG 0.618910 3_1:-80235948 None:intergenic
TCAGACAAAGAGAAGAAGAG+AGG 0.622728 3_1:-80228606 None:intergenic
ACAGAGAAGGATATTGGCCA+TGG 0.628087 3_1:+80232267 Msa0379240:CDS
GGTGGAGGCATGGAGTTGGA+AGG 0.628119 3_1:+80231598 Msa0379240:CDS
GATAAAGCTGATGATGGGGA+AGG 0.628408 3_1:-80233914 None:intergenic
TTATCGAAGAAAGCATTCAA+AGG 0.630674 3_1:-80233112 None:intergenic
TATTTCCAACACCGCAAGAG+GGG 0.630709 3_1:+80233159 Msa0379240:CDS
AATTGAGGCTGACACTATAG+GGG 0.630862 3_1:+80231465 Msa0379240:CDS
CCTAGGCCGCATATCGCGTG+GGG 0.630872 3_1:+80234469 Msa0379240:CDS
GAAGTGTGCAAAATGCCTCC+AGG 0.633750 3_1:-80230813 None:intergenic
CACACAATGCACAATCTCAA+GGG 0.634103 3_1:-80236223 None:intergenic
GCCTAGCTTTCCCAGGACAC+CGG 0.635023 3_1:+80234046 Msa0379240:CDS
GTATTTCCAACACCGCAAGA+GGG 0.639319 3_1:+80233158 Msa0379240:CDS
GGATCCACAGAAGCATCTGA+TGG 0.639641 3_1:+80233349 Msa0379240:CDS
GCCATAGATGAGAGTTGTCG+GGG 0.642771 3_1:+80234889 Msa0379240:CDS
ATATGATAAAGCTGATGATG+GGG 0.645684 3_1:-80233918 None:intergenic
AATGCAGAGGAGTTTGCAAG+TGG 0.646273 3_1:+80235838 Msa0379240:CDS
CAACTGGTGCTGATCCAACA+TGG 0.647951 3_1:-80234100 None:intergenic
GCAATCTCCATCAAATGCTG+TGG 0.648016 3_1:+80233965 Msa0379240:CDS
TTCAGGGAATGATCTCAACT+GGG 0.655695 3_1:+80233380 Msa0379240:CDS
GAGCAGCCGGTAGGAAACGA+GGG 0.658135 3_1:+80235999 Msa0379240:three_prime_UTR
ATTCATGATGATTATCCACA+AGG 0.660419 3_1:+80230085 Msa0379240:CDS
AGAGAACCCAATCTAAAACC+AGG 0.663738 3_1:-80234179 None:intergenic
AAGTCATGGGAAGTCTCCCA+GGG 0.664771 3_1:-80234343 None:intergenic
GTCACAGACTAGTTTATCCG+GGG 0.680067 3_1:+80230875 Msa0379240:CDS
AAAATCATCTGAATTGTGTG+AGG 0.682133 3_1:-80228721 None:intergenic
GAAATGGCAGCTTCACCTGG+AGG 0.683059 3_1:+80230798 Msa0379240:CDS
CAGATATCATCAGTGTACCA+TGG 0.683392 3_1:-80232284 None:intergenic
ATGTTGCTTGAAAGATCCGG+AGG 0.688619 3_1:-80234239 None:intergenic
GATGCTCTCAGCATATGAGC+CGG 0.694610 3_1:-80234065 None:intergenic
TGGTGATCCTGCTTACTCTG+GGG 0.696259 3_1:+80231657 Msa0379240:CDS
CTGTATGGAATAGAATAGGG+CGG 0.700349 3_1:-80235321 None:intergenic
ATATATCTGATATTGCAATG+TGG 0.733494 3_1:+80228807 Msa0379240:five_prime_UTR
ATTACGTAGTAGTGGCAACG+AGG 0.734571 3_1:+80235780 Msa0379240:CDS
GTAGAGGCGAATCTCCGGCG+AGG 0.740182 3_1:-80228674 None:intergenic
TTTGAAATAATGAACCAGAG+GGG 0.758778 3_1:+80229811 Msa0379240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTCATGTTTTTTTT+TGG + chr3_1:80229031-80229050 Msa0379240:intron 10.0%
!!! TTTTCTATAAATATTGTTTT+TGG + chr3_1:80229345-80229364 Msa0379240:intron 10.0%
!!! TAATATAAATGTTACTTTTT+GGG + chr3_1:80229593-80229612 Msa0379240:intron 10.0%
!!! ATACATATTTTTTCCATAAA+GGG - chr3_1:80229144-80229163 None:intergenic 15.0%
!!! AATACATATTTTTTCCATAA+AGG - chr3_1:80229145-80229164 None:intergenic 15.0%
!!! CTAATATAAATGTTACTTTT+TGG + chr3_1:80229592-80229611 Msa0379240:intron 15.0%
!! AACAGAAAACAATAAATAAA+AGG - chr3_1:80229656-80229675 None:intergenic 15.0%
!!! ACATTTAGAATAAATAACTA+TGG + chr3_1:80230425-80230444 Msa0379240:intron 15.0%
!! TGTAAAAAAATAAAGACAAA+AGG - chr3_1:80231792-80231811 None:intergenic 15.0%
!!! ATAAATGATAATAATGGAAA+AGG - chr3_1:80232100-80232119 None:intergenic 15.0%
!! TTCCATTATTATCATTTATT+TGG + chr3_1:80232101-80232120 Msa0379240:intron 15.0%
!! AACCAAATAAATGATAATAA+TGG - chr3_1:80232106-80232125 None:intergenic 15.0%
!! AAAGATGAATTTATTTCAAA+AGG + chr3_1:80233515-80233534 Msa0379240:intron 15.0%
!!! ACTTATTGTTTTACTTTAAA+TGG + chr3_1:80233542-80233561 Msa0379240:intron 15.0%
!!! ATTTTGAAATTTTTAACATC+AGG + chr3_1:80233882-80233901 Msa0379240:intron 15.0%
!!! TGTTTTACAAATTGTTTATT+TGG + chr3_1:80234597-80234616 Msa0379240:intron 15.0%
!! TATTAATACATATGTCAAAT+AGG - chr3_1:80234835-80234854 None:intergenic 15.0%
!!! AATTTGTTAACATTTATAGT+TGG + chr3_1:80235471-80235490 Msa0379240:intron 15.0%
!!! ATTTGTTAACATTTATAGTT+GGG + chr3_1:80235472-80235491 Msa0379240:intron 15.0%
!! ACATTAAGTACTTAAAAAAT+AGG - chr3_1:80235589-80235608 None:intergenic 15.0%
!! TTTAAGTACTTAATGTAATA+AGG + chr3_1:80235593-80235612 Msa0379240:intron 15.0%
!! TAAAATGTAATATACAATGA+CGG - chr3_1:80235951-80235970 None:intergenic 15.0%
!!! TATTTACCTAAATTTTTGTA+TGG + chr3_1:80236113-80236132 Msa0379240:three_prime_UTR 15.0%
!! GAAAAGAATAGAAAAAGAAA+AGG - chr3_1:80228540-80228559 None:intergenic 20.0%
!! GTGAATAATTCTGATATTAA+AGG - chr3_1:80228762-80228781 None:intergenic 20.0%
!! CTCACAAAAAAAGATAAAAA+TGG - chr3_1:80228784-80228803 None:intergenic 20.0%
!!! ATTTTGCAAATTTACAAAGA+TGG + chr3_1:80229311-80229330 Msa0379240:intron 20.0%
!! ATTTCTCTTTCTATAATTTC+TGG + chr3_1:80229770-80229789 Msa0379240:five_prime_UTR 20.0%
!! AAGACATGTTTAGAAAAAAA+AGG - chr3_1:80230018-80230037 None:intergenic 20.0%
!!! TTTTTTTTCTAAACATGTCT+TGG + chr3_1:80230017-80230036 Msa0379240:intron 20.0%
!!! TAATCATCATGAATAGATTT+TGG - chr3_1:80230079-80230098 None:intergenic 20.0%
!! TTAGAATAAATAACTATGGA+TGG + chr3_1:80230429-80230448 Msa0379240:intron 20.0%
!!! ATCGTTTATTTCATTTTGTA+GGG + chr3_1:80230463-80230482 Msa0379240:intron 20.0%
!!! GGTATTAATAGATTTCTTTT+TGG + chr3_1:80230489-80230508 Msa0379240:intron 20.0%
!!! GTTTTTAATCATGATGATAT+TGG + chr3_1:80230634-80230653 Msa0379240:intron 20.0%
!! TTAAATGAACTGCTTATTTA+TGG - chr3_1:80230717-80230736 None:intergenic 20.0%
!! TAAATAAGCAGTTCATTTAA+TGG + chr3_1:80230717-80230736 Msa0379240:intron 20.0%
!!! TTGTCTTTATTTTTTTACAG+CGG + chr3_1:80231793-80231812 Msa0379240:intron 20.0%
!!! AAACGTATTTTTGGATTTTA+TGG + chr3_1:80232339-80232358 Msa0379240:CDS 20.0%
!! AAAAGCAAGAATACTATATA+AGG - chr3_1:80232775-80232794 None:intergenic 20.0%
!! TATACTACTTATAGATAGAA+AGG - chr3_1:80233777-80233796 None:intergenic 20.0%
!!! AAATTTTTAACATCAGGAAA+TGG + chr3_1:80233888-80233907 Msa0379240:intron 20.0%
!!! AATTTTTAACATCAGGAAAT+GGG + chr3_1:80233889-80233908 Msa0379240:intron 20.0%
!! TAATAGAAGAAAAATATGCA+CGG - chr3_1:80234720-80234739 None:intergenic 20.0%
!! TGACATATGTATTAATATCT+CGG + chr3_1:80234838-80234857 Msa0379240:intron 20.0%
!!! ATACTTACTTTGAAATCAAT+TGG - chr3_1:80234937-80234956 None:intergenic 20.0%
!! TTTCAAAGTAAGTATTTGTT+TGG + chr3_1:80234942-80234961 Msa0379240:intron 20.0%
!!! TTAACTGAAGCTTAAAATTT+TGG + chr3_1:80236173-80236192 Msa0379240:three_prime_UTR 20.0%
! AAGAATAGAAAAAGAAAAGG+AGG - chr3_1:80228537-80228556 None:intergenic 25.0%
!!! AGAGAGGTTTTTTTTTGTTT+TGG - chr3_1:80228593-80228612 None:intergenic 25.0%
! ATATATCTGATATTGCAATG+TGG + chr3_1:80228807-80228826 Msa0379240:five_prime_UTR 25.0%
!!! TTGTTTTTTGCTCAATTCTA+TGG + chr3_1:80228922-80228941 Msa0379240:five_prime_UTR 25.0%
!! ACATTGATAAGGAAGATTTT+TGG + chr3_1:80228949-80228968 Msa0379240:five_prime_UTR 25.0%
!!! TTTGGTTTTTATGTCCATTT+GGG + chr3_1:80229057-80229076 Msa0379240:intron 25.0%
!!! TCTTGATCTGTTTGTTTTTA+AGG + chr3_1:80229171-80229190 Msa0379240:intron 25.0%
!!! ATTGTTTTTGGCAATCAATT+AGG + chr3_1:80229357-80229376 Msa0379240:intron 25.0%
! AAAGAGATTAGTGCAAAATT+AGG - chr3_1:80229456-80229475 None:intergenic 25.0%
! CAATAAATAAAAGGTGACAT+TGG - chr3_1:80229647-80229666 None:intergenic 25.0%
! ATCATCTGTTGAAAAATTCA+AGG - chr3_1:80229701-80229720 None:intergenic 25.0%
!! ATAATTTCTGGATAAGCTAT+AGG + chr3_1:80229782-80229801 Msa0379240:five_prime_UTR 25.0%
!!! TTTTGAAATAATGAACCAGA+GGG + chr3_1:80229810-80229829 Msa0379240:CDS 25.0%
! AAAACCAAAATGAGACAATT+CGG - chr3_1:80229900-80229919 None:intergenic 25.0%
! ATAAAAAAACACTCAAGTCT+TGG - chr3_1:80229941-80229960 None:intergenic 25.0%
! AAAAAAAGGCAATAACATTG+AGG - chr3_1:80230004-80230023 None:intergenic 25.0%
! CTTTGGTTAGTAGATATATA+TGG - chr3_1:80230186-80230205 None:intergenic 25.0%
!! CATCGTTTATTTCATTTTGT+AGG + chr3_1:80230462-80230481 Msa0379240:intron 25.0%
!! AGTTCTATGTTCAAATTTTC+AGG + chr3_1:80230768-80230787 Msa0379240:intron 25.0%
!! GTTCTATGTTCAAATTTTCA+GGG + chr3_1:80230769-80230788 Msa0379240:intron 25.0%
!!! TATTTTTGCATTTCTTTCGA+GGG - chr3_1:80230844-80230863 None:intergenic 25.0%
!!! GTTTTAGAAAACGTACATTT+TGG + chr3_1:80230900-80230919 Msa0379240:CDS 25.0%
! TGCATCGTAACAAAATTAAA+TGG - chr3_1:80231185-80231204 None:intergenic 25.0%
!! AATAGAAAAGTTTCCTTTTC+TGG - chr3_1:80231284-80231303 None:intergenic 25.0%
! ATTTCTTCAAGAGATTTGTA+TGG - chr3_1:80231448-80231467 None:intergenic 25.0%
!! TTTAAAGGCAAAAGTTCTTT+TGG + chr3_1:80231682-80231701 Msa0379240:CDS 25.0%
! TATACGTTATTCAATTCCAA+AGG + chr3_1:80232036-80232055 Msa0379240:CDS 25.0%
!!! TATTCCTATTTTTCATGTTC+TGG + chr3_1:80232202-80232221 Msa0379240:intron 25.0%
! ATAACCAGAACATGAAAAAT+AGG - chr3_1:80232209-80232228 None:intergenic 25.0%
!! ATTTTATGGAGAAATCAAAG+AGG + chr3_1:80232353-80232372 Msa0379240:CDS 25.0%
! TATTTGATATGATTCATCTC+TGG - chr3_1:80232482-80232501 None:intergenic 25.0%
!! ATTGAATTTTATGATGTTCG+AGG + chr3_1:80232503-80232522 Msa0379240:CDS 25.0%
! ACAAAACATGTATCAAAGAT+AGG - chr3_1:80232710-80232729 None:intergenic 25.0%
!!! ATAGTATTCTTGCTTTTTAG+TGG + chr3_1:80232778-80232797 Msa0379240:intron 25.0%
! ATCTTATTCTTAAGACAGAA+GGG + chr3_1:80232930-80232949 Msa0379240:CDS 25.0%
! TTTGTCAAACACCATTAAAA+TGG + chr3_1:80233309-80233328 Msa0379240:CDS 25.0%
! TATCTATAAGTAGTATAAGC+TGG + chr3_1:80233780-80233799 Msa0379240:intron 25.0%
! ATCTATAAGTAGTATAAGCT+GGG + chr3_1:80233781-80233800 Msa0379240:intron 25.0%
! AATAGAAGAAAAATATGCAC+GGG - chr3_1:80234719-80234738 None:intergenic 25.0%
! AATGCTAGTAGTTATATTAG+AGG + chr3_1:80235508-80235527 Msa0379240:intron 25.0%
! GATAAAATGCTATGTTATTG+TGG + chr3_1:80235683-80235702 Msa0379240:intron 25.0%
!!! ATTTTTTCTTTTTTTCGTGC+AGG + chr3_1:80235714-80235733 Msa0379240:intron 25.0%
! ATGGTTCCATACAAAAATTT+AGG - chr3_1:80236122-80236141 None:intergenic 25.0%
!! TAGGATTTTTGTCTATATGT+TGG + chr3_1:80236339-80236358 Msa0379240:three_prime_UTR 25.0%
!! AGGATTTTTGTCTATATGTT+GGG + chr3_1:80236340-80236359 Msa0379240:three_prime_UTR 25.0%
AAAATCATCTGAATTGTGTG+AGG - chr3_1:80228724-80228743 None:intergenic 30.0%
ACAAAAGATCTCATGATGTT+TGG - chr3_1:80228855-80228874 None:intergenic 30.0%
TCTATGGTGAAACATTGATA+AGG + chr3_1:80228938-80228957 Msa0379240:five_prime_UTR 30.0%
! TTTTGTTCGAATTGTTGACA+AGG + chr3_1:80228990-80229009 Msa0379240:five_prime_UTR 30.0%
!!! CATGTTTTTTTTTGGCTGTT+TGG + chr3_1:80229039-80229058 Msa0379240:intron 30.0%
!!! GTTTGGTTTTTATGTCCATT+TGG + chr3_1:80229056-80229075 Msa0379240:intron 30.0%
ACAGATCAAAAACATGAACA+TGG - chr3_1:80229102-80229121 None:intergenic 30.0%
TGTTTAGATTAGACCCTTTA+TGG + chr3_1:80229128-80229147 Msa0379240:intron 30.0%
TAGAAATAGAGCCTCTAAAT+AGG + chr3_1:80229494-80229513 Msa0379240:intron 30.0%
AGAAATAGAGCCTCTAAATA+GGG + chr3_1:80229495-80229514 Msa0379240:intron 30.0%
ACTAAAGAAACCCTATTTAG+AGG - chr3_1:80229508-80229527 None:intergenic 30.0%
!!! TCCTTTTTTGTTTGAGAGTA+TGG + chr3_1:80229546-80229565 Msa0379240:intron 30.0%
ACCATACTCTCAAACAAAAA+AGG - chr3_1:80229550-80229569 None:intergenic 30.0%
!! TTTTGTTTGAGAGTATGGTA+TGG + chr3_1:80229551-80229570 Msa0379240:intron 30.0%
! TTTGTTTGAGAGTATGGTAT+GGG + chr3_1:80229552-80229571 Msa0379240:intron 30.0%
! CTCTGGTTCATTATTTCAAA+AGG - chr3_1:80229811-80229830 None:intergenic 30.0%
!!! CTTTTGAAATAATGAACCAG+AGG + chr3_1:80229809-80229828 Msa0379240:CDS 30.0%
! TTTGAAATAATGAACCAGAG+GGG + chr3_1:80229811-80229830 Msa0379240:CDS 30.0%
GGAAACATCATCATAAAGAT+GGG - chr3_1:80229854-80229873 None:intergenic 30.0%
AGGAAACATCATCATAAAGA+TGG - chr3_1:80229855-80229874 None:intergenic 30.0%
! AATAATTACCTCAGAAGCAT+AGG - chr3_1:80229875-80229894 None:intergenic 30.0%
! TTTTCCGAATTGTCTCATTT+TGG + chr3_1:80229893-80229912 Msa0379240:intron 30.0%
ATTCATGATGATTATCCACA+AGG + chr3_1:80230085-80230104 Msa0379240:CDS 30.0%
! TGGAGTGTTAATATCATAGT+AGG - chr3_1:80230166-80230185 None:intergenic 30.0%
AGGTAAGGTACACAAAAATA+TGG - chr3_1:80230316-80230335 None:intergenic 30.0%
!! ATTAAAACTAGAGAGGTATC+AGG - chr3_1:80230336-80230355 None:intergenic 30.0%
CTGTTCAATTAAAACTAGAG+AGG - chr3_1:80230343-80230362 None:intergenic 30.0%
ACGACAGTAAAGTTCAAAAA+TGG - chr3_1:80230378-80230397 None:intergenic 30.0%
TAAAACATCTATACGATCCT+GGG - chr3_1:80230403-80230422 None:intergenic 30.0%
ATAAAACATCTATACGATCC+TGG - chr3_1:80230404-80230423 None:intergenic 30.0%
! TTATTTCATTTTGTAGGGAG+TGG + chr3_1:80230468-80230487 Msa0379240:intron 30.0%
! GATATAGCTTGCGTAATTAA+TGG + chr3_1:80230535-80230554 Msa0379240:intron 30.0%
AAGTAAACACACACGAATAT+GGG - chr3_1:80230689-80230708 None:intergenic 30.0%
TGGACATGTAATTCATTTGT+TGG + chr3_1:80230737-80230756 Msa0379240:intron 30.0%
!!! CTATTTTTGCATTTCTTTCG+AGG - chr3_1:80230845-80230864 None:intergenic 30.0%
CTCGAAAGAAATGCAAAAAT+AGG + chr3_1:80230843-80230862 Msa0379240:CDS 30.0%
! TCTAGCTCATATGGTTTAAT+TGG + chr3_1:80231017-80231036 Msa0379240:CDS 30.0%
CTAGCTCATATGGTTTAATT+GGG + chr3_1:80231018-80231037 Msa0379240:CDS 30.0%
!! ACACTTTTGGCTAAACATAT+CGG - chr3_1:80231102-80231121 None:intergenic 30.0%
! GAAACACATTCTTACACTTT+TGG - chr3_1:80231115-80231134 None:intergenic 30.0%
CAAATCTCTTGAAGAAATTG+AGG + chr3_1:80231450-80231469 Msa0379240:CDS 30.0%
!!! TCTTCTAGAACACTTTTTGT+TGG + chr3_1:80231712-80231731 Msa0379240:CDS 30.0%
TGATTTCTTACTATGACCTA+AGG + chr3_1:80231954-80231973 Msa0379240:CDS 30.0%
GATTTCTTACTATGACCTAA+GGG + chr3_1:80231955-80231974 Msa0379240:CDS 30.0%
!! CAATGAAAGCACTTCAAAAT+AGG + chr3_1:80231990-80232009 Msa0379240:CDS 30.0%
AAAATAGGACATTGAGTTCT+AGG + chr3_1:80232005-80232024 Msa0379240:CDS 30.0%
ACTAAACAAGATGATACCTT+TGG - chr3_1:80232055-80232074 None:intergenic 30.0%
! GACGAACTAAAACGTATTTT+TGG + chr3_1:80232330-80232349 Msa0379240:CDS 30.0%
AGAGGTAAGTTATTCTTTGT+TGG + chr3_1:80232371-80232390 Msa0379240:intron 30.0%
TTGATATACAAGCACCAAAA+GGG - chr3_1:80232405-80232424 None:intergenic 30.0%
TTTGATATACAAGCACCAAA+AGG - chr3_1:80232406-80232425 None:intergenic 30.0%
GGTAACAAGAATAAATATGC+AGG - chr3_1:80232754-80232773 None:intergenic 30.0%
CATCTTATTCTTAAGACAGA+AGG + chr3_1:80232929-80232948 Msa0379240:CDS 30.0%
TTTAGAAGCTAAGATCTACT+TGG + chr3_1:80232984-80233003 Msa0379240:intron 30.0%
!! TTATCGAAGAAAGCATTCAA+AGG - chr3_1:80233115-80233134 None:intergenic 30.0%
ATGGTGTTTGACAAATTGTA+AGG - chr3_1:80233304-80233323 None:intergenic 30.0%
!! AATATTGGCAGCCATTTTAA+TGG - chr3_1:80233323-80233342 None:intergenic 30.0%
ATTAAAATGGCTGCCAATAT+TGG + chr3_1:80233322-80233341 Msa0379240:CDS 30.0%
!! AACTTAGCAGATTTTAATGC+AGG + chr3_1:80233403-80233422 Msa0379240:CDS 30.0%
! GATTATCCATGAAGCTTTTT+AGG - chr3_1:80233445-80233464 None:intergenic 30.0%
! TGTTTGCAACATTTTCAGAA+TGG + chr3_1:80233471-80233490 Msa0379240:intron 30.0%
! TTTTGAATTCCTAGGAATCT+AGG - chr3_1:80233571-80233590 None:intergenic 30.0%
!!! TTCAAAGGTTTTGAATTCCT+AGG - chr3_1:80233579-80233598 None:intergenic 30.0%
! GTTACAGTTAATGACAGTTT+TGG + chr3_1:80233606-80233625 Msa0379240:intron 30.0%
AGTATCAGAGAATAAGCATT+TGG + chr3_1:80233717-80233736 Msa0379240:intron 30.0%
TTGGATTTCAATCTTTGTCT+TGG + chr3_1:80233736-80233755 Msa0379240:intron 30.0%
! ATATGATAAAGCTGATGATG+GGG - chr3_1:80233921-80233940 None:intergenic 30.0%
CATATGATAAAGCTGATGAT+GGG - chr3_1:80233922-80233941 None:intergenic 30.0%
ACATATGATAAAGCTGATGA+TGG - chr3_1:80233923-80233942 None:intergenic 30.0%
! ATCATCAGCTTTATCATATG+TGG + chr3_1:80233922-80233941 Msa0379240:CDS 30.0%
! AAAACGCCATCTTTTGTTAA+TGG + chr3_1:80233996-80234015 Msa0379240:CDS 30.0%
GAAAGACAACATTCTTACTT+GGG + chr3_1:80234140-80234159 Msa0379240:CDS 30.0%
! AGCAACATGTTTTCTCATAT+TGG + chr3_1:80234254-80234273 Msa0379240:CDS 30.0%
! AACATGTTTTCTCATATTGG+TGG + chr3_1:80234257-80234276 Msa0379240:CDS 30.0%
! ACATGTTTTCTCATATTGGT+GGG + chr3_1:80234258-80234277 Msa0379240:CDS 30.0%
AATTTCGACATTGAAGTCAT+GGG - chr3_1:80234359-80234378 None:intergenic 30.0%
AAATTTCGACATTGAAGTCA+TGG - chr3_1:80234360-80234379 None:intergenic 30.0%
CTAATGCATCAAAGTGAAAA+GGG - chr3_1:80234629-80234648 None:intergenic 30.0%
ACTAATGCATCAAAGTGAAA+AGG - chr3_1:80234630-80234649 None:intergenic 30.0%
! TACCTTAAACAGATTTTCCT+AGG + chr3_1:80234762-80234781 Msa0379240:intron 30.0%
AGTAAAGCTTGCAAATTCTT+TGG + chr3_1:80234785-80234804 Msa0379240:intron 30.0%
!! ATTCTTTGGCTTTGATCTAT+TGG + chr3_1:80234799-80234818 Msa0379240:intron 30.0%
ATATGTATTAATATCTCGGC+AGG + chr3_1:80234842-80234861 Msa0379240:intron 30.0%
!! AGTAAGTATTTGTTTGGTGT+TGG + chr3_1:80234948-80234967 Msa0379240:intron 30.0%
AACGTTTATCTTCATTCATC+AGG - chr3_1:80235300-80235319 None:intergenic 30.0%
CATCTGTATGGAATAGAATA+GGG - chr3_1:80235327-80235346 None:intergenic 30.0%
TAAAGAACAAGCAGATTTAC+CGG - chr3_1:80235367-80235386 None:intergenic 30.0%
AGCAACAGGAAAATAGTTAT+AGG - chr3_1:80235390-80235409 None:intergenic 30.0%
CAAATTAATCCAGAAATACG+AGG - chr3_1:80235457-80235476 None:intergenic 30.0%
TATAACTACTAGCATTGTAC+AGG - chr3_1:80235504-80235523 None:intergenic 30.0%
GAAATAATTCTTACTTGAGC+TGG + chr3_1:80235647-80235666 Msa0379240:intron 30.0%
ACTCTAATATTTGCACCTAA+GGG - chr3_1:80235748-80235767 None:intergenic 30.0%
TACTCTAATATTTGCACCTA+AGG - chr3_1:80235749-80235768 None:intergenic 30.0%
TAGGTGCAAATATTAGAGTA+AGG + chr3_1:80235749-80235768 Msa0379240:CDS 30.0%
! TCACAATTTTGGACTTATAG+AGG + chr3_1:80236023-80236042 Msa0379240:three_prime_UTR 30.0%
AAACTTGTAAGATGGTAGAA+TGG - chr3_1:80236141-80236160 None:intergenic 30.0%
AGGTTGAAGAGACAGAAAAT+GGG - chr3_1:80228704-80228723 None:intergenic 35.0%
ATCTGATATTGCAATGTGGA+AGG + chr3_1:80228811-80228830 Msa0379240:five_prime_UTR 35.0%
TGAATTCCTTATGCTGTAGA+CGG + chr3_1:80228878-80228897 Msa0379240:five_prime_UTR 35.0%
! TTTGGATTTTTCTGCTAGCT+TGG + chr3_1:80228967-80228986 Msa0379240:five_prime_UTR 35.0%
TTCCTGATCAAAAACCCAAA+TGG - chr3_1:80229074-80229093 None:intergenic 35.0%
! ATTTTGTGATAGAACCGATG+TGG + chr3_1:80229226-80229245 Msa0379240:intron 35.0%
AAGCTTACAATGTTCCACAT+CGG - chr3_1:80229243-80229262 None:intergenic 35.0%
TTGGCAATCAATTAGGTAGT+TGG + chr3_1:80229364-80229383 Msa0379240:intron 35.0%
CAATCAATTAGGTAGTTGGT+AGG + chr3_1:80229368-80229387 Msa0379240:intron 35.0%
TTCAACTAAACACTACCAGA+AGG - chr3_1:80229416-80229435 None:intergenic 35.0%
! TTCTGGTAGTGTTTAGTTGA+AGG + chr3_1:80229415-80229434 Msa0379240:intron 35.0%
GAGTGTTAACTATCTGTCTT+TGG - chr3_1:80230203-80230222 None:intergenic 35.0%
CAAATGTGAAACAGTGATCA+AGG - chr3_1:80230229-80230248 None:intergenic 35.0%
CAAGTAAACACACACGAATA+TGG - chr3_1:80230690-80230709 None:intergenic 35.0%
!! ATTTTCAGGGAAGAGTGAAA+TGG + chr3_1:80230782-80230801 Msa0379240:intron 35.0%
! GATAAACTAGTCTGTGACAT+TGG - chr3_1:80230873-80230892 None:intergenic 35.0%
!! ATGTCACAGACTAGTTTATC+CGG + chr3_1:80230873-80230892 Msa0379240:CDS 35.0%
!!! TACGTTTTCTAAAACTTCCC+CGG - chr3_1:80230895-80230914 None:intergenic 35.0%
!! AAAAGTTTCCTTTTCTGGTG+GGG - chr3_1:80231279-80231298 None:intergenic 35.0%
!! GAAAAGTTTCCTTTTCTGGT+GGG - chr3_1:80231280-80231299 None:intergenic 35.0%
! AGAAAAGTTTCCTTTTCTGG+TGG - chr3_1:80231281-80231300 None:intergenic 35.0%
!! TTCCCATATATCTCTGAGAT+TGG + chr3_1:80231328-80231347 Msa0379240:intron 35.0%
!! TCCCATATATCTCTGAGATT+GGG + chr3_1:80231329-80231348 Msa0379240:intron 35.0%
ACCCAATCTCAGAGATATAT+GGG - chr3_1:80231333-80231352 None:intergenic 35.0%
TCTGATCAGAATATTACTGC+TGG + chr3_1:80231403-80231422 Msa0379240:CDS 35.0%
AAATTGAGGCTGACACTATA+GGG + chr3_1:80231464-80231483 Msa0379240:CDS 35.0%
!!! GATTTTGATTTGTTCAGCAG+TGG + chr3_1:80231577-80231596 Msa0379240:CDS 35.0%
CTTTCAGGAAAAAGAATCAG+TGG + chr3_1:80231628-80231647 Msa0379240:CDS 35.0%
TGTTTGTTCTTCCAGCAATA+TGG + chr3_1:80231884-80231903 Msa0379240:intron 35.0%
TCTCAACCTGATGACATATT+AGG + chr3_1:80232236-80232255 Msa0379240:intron 35.0%
CTCAACCTGATGACATATTA+GGG + chr3_1:80232237-80232256 Msa0379240:intron 35.0%
GATTTCCCTAATATGTCATC+AGG - chr3_1:80232245-80232264 None:intergenic 35.0%
AATCCTACAGAGAAGGATAT+TGG + chr3_1:80232261-80232280 Msa0379240:CDS 35.0%
TGATATACAAGCACCAAAAG+GGG - chr3_1:80232404-80232423 None:intergenic 35.0%
AGACATAACACTTAAGAAGC+TGG - chr3_1:80232437-80232456 None:intergenic 35.0%
TGCACATTCCATTCAATGAA+CGG - chr3_1:80232544-80232563 None:intergenic 35.0%
TGTTACTGATCACACAATCA+TGG + chr3_1:80232829-80232848 Msa0379240:intron 35.0%
TGAGTCATACTACAAAAGCA+GGG - chr3_1:80232858-80232877 None:intergenic 35.0%
TTGAGATTATGACCAAGATC+AGG - chr3_1:80232906-80232925 None:intergenic 35.0%
CACTAGACATAATTTACAGC+CGG + chr3_1:80233010-80233029 Msa0379240:intron 35.0%
AATAACTCCAGAAGATAGTC+CGG - chr3_1:80233032-80233051 None:intergenic 35.0%
! TTTCATTGCATCGACATTAC+TGG - chr3_1:80233212-80233231 None:intergenic 35.0%
TATCGTGATGGTTTAGCTAA+TGG + chr3_1:80233274-80233293 Msa0379240:CDS 35.0%
!! TTAGCAGATTTTAATGCAGG+AGG + chr3_1:80233406-80233425 Msa0379240:CDS 35.0%
ACTGTAACAGTAGAGTTCAA+AGG - chr3_1:80233594-80233613 None:intergenic 35.0%
! AATCTTTGTCTTGGTTCTCA+TGG + chr3_1:80233745-80233764 Msa0379240:intron 35.0%
! ATCTTTGTCTTGGTTCTCAT+GGG + chr3_1:80233746-80233765 Msa0379240:intron 35.0%
!! GGCTGAAAAGGTATCAAATT+TGG + chr3_1:80233812-80233831 Msa0379240:intron 35.0%
! CAGCTTTATCATATGTGGAA+TGG + chr3_1:80233927-80233946 Msa0379240:CDS 35.0%
TCACATATTGAACACCATGT+TGG + chr3_1:80234086-80234105 Msa0379240:CDS 35.0%
TAAGAATGTTGTCTTTCCCA+GGG - chr3_1:80234137-80234156 None:intergenic 35.0%
GGAAAGACAACATTCTTACT+TGG + chr3_1:80234139-80234158 Msa0379240:CDS 35.0%
! AACATGTTGCTTGAAAGATC+CGG - chr3_1:80234245-80234264 None:intergenic 35.0%
! TTTTCTCATATTGGTGGGAA+TGG + chr3_1:80234263-80234282 Msa0379240:CDS 35.0%
GAAGTTTCTCATTCGTTCAT+TGG - chr3_1:80234390-80234409 None:intergenic 35.0%
AAACAATTTGAACTCGACCT+AGG + chr3_1:80234452-80234471 Msa0379240:CDS 35.0%
GATAGCGAGAAATACTTGTT+GGG - chr3_1:80234530-80234549 None:intergenic 35.0%
AGATAGCGAGAAATACTTGT+TGG - chr3_1:80234531-80234550 None:intergenic 35.0%
CTCCTAGGAAAATCTGTTTA+AGG - chr3_1:80234767-80234786 None:intergenic 35.0%
AATTTGCAAGCTTTACTCCT+AGG - chr3_1:80234782-80234801 None:intergenic 35.0%
TTGCAGAACAAGTGTAATGT+TGG + chr3_1:80235031-80235050 Msa0379240:intron 35.0%
TTCATCAACATGATTGATCC+TGG + chr3_1:80235061-80235080 Msa0379240:CDS 35.0%
TGGAATGGAATTATTTGACC+AGG - chr3_1:80235082-80235101 None:intergenic 35.0%
TCAAATAATTCCATTCCACC+AGG + chr3_1:80235084-80235103 Msa0379240:CDS 35.0%
ATAAGAGTTCTCAAGTAACC+TGG - chr3_1:80235105-80235124 None:intergenic 35.0%
! AGGCTTTTCATGGGAAAAAA+TGG + chr3_1:80235185-80235204 Msa0379240:intron 35.0%
! GGCTTTTCATGGGAAAAAAT+GGG + chr3_1:80235186-80235205 Msa0379240:intron 35.0%
GGAGAAGTTTAACAGTGAAA+AGG + chr3_1:80235207-80235226 Msa0379240:CDS 35.0%
! AGCAGATTTTCCTTGAATTC+GGG - chr3_1:80235251-80235270 None:intergenic 35.0%
! GAGCAGATTTTCCTTGAATT+CGG - chr3_1:80235252-80235271 None:intergenic 35.0%
CCATCTGTATGGAATAGAAT+AGG - chr3_1:80235328-80235347 None:intergenic 35.0%
CCTATTCTATTCCATACAGA+TGG + chr3_1:80235325-80235344 Msa0379240:CDS 35.0%
GATATCTGTCAGAAGAATGT+CGG - chr3_1:80235431-80235450 None:intergenic 35.0%
ATATTTGCACCTAAGGGAAA+AGG - chr3_1:80235742-80235761 None:intergenic 35.0%
TGCAAATATTAGAGTAAGGC+CGG + chr3_1:80235753-80235772 Msa0379240:CDS 35.0%
TTGAAGAATTCCCTTGACTA+CGG - chr3_1:80235810-80235829 None:intergenic 35.0%
TCAAGGGAATTCTTCAACTT+TGG + chr3_1:80235813-80235832 Msa0379240:CDS 35.0%
TCGACCTTCAAAAACTTTCA+AGG - chr3_1:80236051-80236070 None:intergenic 35.0%
!! TTGAAAGTTTTTGAAGGTCG+AGG + chr3_1:80236050-80236069 Msa0379240:three_prime_UTR 35.0%
GTCTCTCTAAACTTGTAAGA+TGG - chr3_1:80236149-80236168 None:intergenic 35.0%
ATTGTGCATTGTGTGTTTCA+AGG + chr3_1:80236231-80236250 Msa0379240:three_prime_UTR 35.0%
TTGTGCATTGTGTGTTTCAA+GGG + chr3_1:80236232-80236251 Msa0379240:three_prime_UTR 35.0%
CTATATGTTGGGATTGTTGA+AGG + chr3_1:80236351-80236370 Msa0379240:three_prime_UTR 35.0%
! AAAAGGAGGTGTGTGTTAGT+TGG - chr3_1:80228523-80228542 None:intergenic 40.0%
TCAGACAAAGAGAAGAAGAG+AGG - chr3_1:80228609-80228628 None:intergenic 40.0%
ACAGAAAATGGGAAGAGTAG+AGG - chr3_1:80228693-80228712 None:intergenic 40.0%
GAGGTTGAAGAGACAGAAAA+TGG - chr3_1:80228705-80228724 None:intergenic 40.0%
ATTGCAATGTGGAAGGAACA+AGG + chr3_1:80228818-80228837 Msa0379240:five_prime_UTR 40.0%
! GGAAGGAACAAGGTTTTTGT+TGG + chr3_1:80228828-80228847 Msa0379240:five_prime_UTR 40.0%
CAAAAACCGTCTACAGCATA+AGG - chr3_1:80228887-80228906 None:intergenic 40.0%
!! GTCCATTTGGGTTTTTGATC+AGG + chr3_1:80229069-80229088 Msa0379240:intron 40.0%
CTAAACACTACCAGAAGGAA+AGG - chr3_1:80229411-80229430 None:intergenic 40.0%
!! GTATGGGTTGATGTTAGTAG+AGG + chr3_1:80229568-80229587 Msa0379240:intron 40.0%
CAAGGTCACATGCTTGAAAA+AGG - chr3_1:80229683-80229702 None:intergenic 40.0%
TTCAACAAAGCTAGCAAGTG+AGG + chr3_1:80229732-80229751 Msa0379240:five_prime_UTR 40.0%
TGATGTTTCCTATGCTTCTG+AGG + chr3_1:80229864-80229883 Msa0379240:CDS 40.0%
AGTACATGAGATCGAGAAGT+CGG - chr3_1:80229975-80229994 None:intergenic 40.0%
TTTCATGTGCAGAGGAATGT+TGG + chr3_1:80230043-80230062 Msa0379240:intron 40.0%
TGCAGAGGAATGTTGGATTA+AGG + chr3_1:80230050-80230069 Msa0379240:intron 40.0%
TGATGATTATCCACAAGGTG+AGG + chr3_1:80230090-80230109 Msa0379240:intron 40.0%
TAGAGTCCTATATGTCATGC+TGG + chr3_1:80230137-80230156 Msa0379240:intron 40.0%
AGGAAACCAGCATGACATAT+AGG - chr3_1:80230146-80230165 None:intergenic 40.0%
!! AACTAGAGAGGTATCAGGTA+AGG - chr3_1:80230331-80230350 None:intergenic 40.0%
!! TGTCACAGACTAGTTTATCC+GGG + chr3_1:80230874-80230893 Msa0379240:CDS 40.0%
TGAATTATCACCCGAGATCA+TGG + chr3_1:80230970-80230989 Msa0379240:CDS 40.0%
AAACCATATGAGCTAGATGC+TGG - chr3_1:80231014-80231033 None:intergenic 40.0%
AACAAGATTGTCACCAATGC+AGG + chr3_1:80231041-80231060 Msa0379240:CDS 40.0%
CACCCAATCTCAGAGATATA+TGG - chr3_1:80231334-80231353 None:intergenic 40.0%
GGGTGTTTGTATGCATATCT+TGG + chr3_1:80231349-80231368 Msa0379240:intron 40.0%
GATTTGTATGGTTCTTCCTC+AGG - chr3_1:80231436-80231455 None:intergenic 40.0%
GAAATTGAGGCTGACACTAT+AGG + chr3_1:80231463-80231482 Msa0379240:CDS 40.0%
AATTGAGGCTGACACTATAG+GGG + chr3_1:80231465-80231484 Msa0379240:CDS 40.0%
GAAAACAGATCATCTTCGTC+AGG - chr3_1:80231499-80231518 None:intergenic 40.0%
! GACGAAGATGATCTGTTTTC+CGG + chr3_1:80231499-80231518 Msa0379240:CDS 40.0%
!! TTTGATTTGTTCAGCAGTGG+TGG + chr3_1:80231580-80231599 Msa0379240:CDS 40.0%
TTGGAAGGAGATGAACTTTC+AGG + chr3_1:80231613-80231632 Msa0379240:CDS 40.0%
AGGAAAAAGAATCAGTGGCT+TGG + chr3_1:80231633-80231652 Msa0379240:CDS 40.0%
! AAAAGAATCAGTGGCTTGGA+TGG + chr3_1:80231637-80231656 Msa0379240:CDS 40.0%
TACAGCGGTAGATGCTATAT+AGG + chr3_1:80231808-80231827 Msa0379240:intron 40.0%
TTCGGATATCTCCATATTGC+TGG - chr3_1:80231898-80231917 None:intergenic 40.0%
ATGCTTGGAGGCAGTATAAA+GGG - chr3_1:80231921-80231940 None:intergenic 40.0%
!! GACATTGAGTTCTAGGAAAC+TGG + chr3_1:80232012-80232031 Msa0379240:CDS 40.0%
TTAGGGAAATCCTACAGAGA+AGG + chr3_1:80232254-80232273 Msa0379240:intron 40.0%
CAGATATCATCAGTGTACCA+TGG - chr3_1:80232287-80232306 None:intergenic 40.0%
CATGGTACACTGATGATATC+TGG + chr3_1:80232285-80232304 Msa0379240:CDS 40.0%
GATATACAAGCACCAAAAGG+GGG - chr3_1:80232403-80232422 None:intergenic 40.0%
TTGAATGGAATGTGCATTGC+TGG + chr3_1:80232548-80232567 Msa0379240:CDS 40.0%
GTCATCCTAGGATTGCAATA+TGG + chr3_1:80232594-80232613 Msa0379240:CDS 40.0%
ATCCTAGGATTGCAATATGG+TGG + chr3_1:80232597-80232616 Msa0379240:intron 40.0%
CTGAGTCATACTACAAAAGC+AGG - chr3_1:80232859-80232878 None:intergenic 40.0%
TATGACTCAGCCATCTCAAA+AGG + chr3_1:80232869-80232888 Msa0379240:CDS 40.0%
ATGACTCAGCCATCTCAAAA+GGG + chr3_1:80232870-80232889 Msa0379240:CDS 40.0%
!! TCATCTTGTCCCTTTTGAGA+TGG - chr3_1:80232882-80232901 None:intergenic 40.0%
!! TCTTCTGGAGTTATTGCATC+TGG + chr3_1:80233037-80233056 Msa0379240:CDS 40.0%
!! GCATCTGCTGTAAAAGTATC+TGG + chr3_1:80233181-80233200 Msa0379240:CDS 40.0%
! AAAGAATGAGGGTGCAATCT+TGG - chr3_1:80233247-80233266 None:intergenic 40.0%
GATACTCAGGCAAAGAATGA+GGG - chr3_1:80233258-80233277 None:intergenic 40.0%
TGTGGATCCAGTTCCAATAT+TGG - chr3_1:80233338-80233357 None:intergenic 40.0%
ATTCAGGGAATGATCTCAAC+TGG + chr3_1:80233379-80233398 Msa0379240:CDS 40.0%
TTCAGGGAATGATCTCAACT+GGG + chr3_1:80233380-80233399 Msa0379240:CDS 40.0%
AACGTGCCTAAAAAGCTTCA+TGG + chr3_1:80233436-80233455 Msa0379240:intron 40.0%
AAATGGCATCCTAGATTCCT+AGG + chr3_1:80233559-80233578 Msa0379240:intron 40.0%
! TCTTTGTCTTGGTTCTCATG+GGG + chr3_1:80233747-80233766 Msa0379240:intron 40.0%
AGTATAAGCTGGGTAGTAAG+AGG + chr3_1:80233791-80233810 Msa0379240:intron 40.0%
CCAACGCCATTAACAAAAGA+TGG - chr3_1:80234005-80234024 None:intergenic 40.0%
! CCATCTTTTGTTAATGGCGT+TGG + chr3_1:80234002-80234021 Msa0379240:CDS 40.0%
GTAAGAATGTTGTCTTTCCC+AGG - chr3_1:80234138-80234157 None:intergenic 40.0%
!! AATCTAAAACCAGGAGCATC+AGG - chr3_1:80234173-80234192 None:intergenic 40.0%
!!! TGATGCTCCTGGTTTTAGAT+TGG + chr3_1:80234172-80234191 Msa0379240:CDS 40.0%
!!! GATGCTCCTGGTTTTAGATT+GGG + chr3_1:80234173-80234192 Msa0379240:CDS 40.0%
! AGAGAACCCAATCTAAAACC+AGG - chr3_1:80234182-80234201 None:intergenic 40.0%
!!! GGTTTTAGATTGGGTTCTCT+AGG + chr3_1:80234182-80234201 Msa0379240:CDS 40.0%
! CTAGGAAATGCAGGTTTTCA+TGG + chr3_1:80234200-80234219 Msa0379240:CDS 40.0%
AACGATTTGACATCCAGTGT+TGG + chr3_1:80234287-80234306 Msa0379240:CDS 40.0%
ACGATTTGACATCCAGTGTT+GGG + chr3_1:80234288-80234307 Msa0379240:CDS 40.0%
AAGACATGTGACAACTGCTT+AGG - chr3_1:80234323-80234342 None:intergenic 40.0%
GCAAAAGAGCAAGACAAGAT+TGG - chr3_1:80234656-80234675 None:intergenic 40.0%
CACGGGCAAGTAAAAAGTAA+AGG - chr3_1:80234702-80234721 None:intergenic 40.0%
! AGTTAATCTGTTTCTCGTGC+AGG + chr3_1:80235165-80235184 Msa0379240:intron 40.0%
CATTCATCAGGCTTGAATTC+TGG - chr3_1:80235288-80235307 None:intergenic 40.0%
CTGTATGGAATAGAATAGGG+CGG - chr3_1:80235324-80235343 None:intergenic 40.0%
GAATGTCGGTAATAAGCAGA+TGG - chr3_1:80235417-80235436 None:intergenic 40.0%
GATATCATGCCTCGTATTTC+TGG + chr3_1:80235445-80235464 Msa0379240:intron 40.0%
GCAAATATTAGAGTAAGGCC+GGG + chr3_1:80235754-80235773 Msa0379240:CDS 40.0%
! CCACTACTACGTAATTTTCC+CGG - chr3_1:80235775-80235794 None:intergenic 40.0%
TTCAACTTTGGCAAATGCAG+AGG + chr3_1:80235825-80235844 Msa0379240:CDS 40.0%
TCAGTGTCTCTTGAAGAACT+TGG - chr3_1:80235877-80235896 None:intergenic 40.0%
CATTGAACTGTTAGTGCTTG+AGG - chr3_1:80235910-80235929 None:intergenic 40.0%
! ATACAATGACGGAGTTGACA+TGG - chr3_1:80235940-80235959 None:intergenic 40.0%
! GGAGCCTTGAAAGTTTTTGA+AGG + chr3_1:80236044-80236063 Msa0379240:three_prime_UTR 40.0%
CACACAATGCACAATCTCAA+GGG - chr3_1:80236226-80236245 None:intergenic 40.0%
ACACACAATGCACAATCTCA+AGG - chr3_1:80236227-80236246 None:intergenic 40.0%
TTGTTTGTATCCGTGAGCAT+TGG + chr3_1:80236308-80236327 Msa0379240:three_prime_UTR 40.0%
TATAAAGACGCCAATGCTCA+CGG - chr3_1:80236321-80236340 None:intergenic 40.0%
TATGTTGGGATTGTTGAAGG+AGG + chr3_1:80236354-80236373 Msa0379240:three_prime_UTR 40.0%
TTTGTGCTGTCCTTTCCTTC+TGG + chr3_1:80229398-80229417 Msa0379240:intron 45.0%
! CTTGGACTTTTCATGTGCAG+AGG + chr3_1:80230035-80230054 Msa0379240:intron 45.0%
AGTTGATTGACCTCACCTTG+TGG - chr3_1:80230103-80230122 None:intergenic 45.0%
!! GTCACAGACTAGTTTATCCG+GGG + chr3_1:80230875-80230894 Msa0379240:CDS 45.0%
!! GTACATTTTGGTGCACAAGC+TGG + chr3_1:80230912-80230931 Msa0379240:CDS 45.0%
AGATGCGCTGAAGGATTCAA+AGG + chr3_1:80230941-80230960 Msa0379240:CDS 45.0%
TGCACATCAGACCATGATCT+CGG - chr3_1:80230984-80231003 None:intergenic 45.0%
GATCATGGTCTGATGTGCAT+AGG + chr3_1:80230985-80231004 Msa0379240:CDS 45.0%
! ATGCATATCTTGGTGCAGTG+AGG + chr3_1:80231359-80231378 Msa0379240:intron 45.0%
ACAGATCATCTTCGTCAGGA+AGG - chr3_1:80231495-80231514 None:intergenic 45.0%
TCCTAAACCATCAGTGACAC+CGG - chr3_1:80231521-80231540 None:intergenic 45.0%
ATGGTGATCCTGCTTACTCT+GGG + chr3_1:80231656-80231675 Msa0379240:CDS 45.0%
TTAAAAGCCCCAGAGTAAGC+AGG - chr3_1:80231667-80231686 None:intergenic 45.0%
!!! GCTTACTCTGGGGCTTTTAA+AGG + chr3_1:80231667-80231686 Msa0379240:CDS 45.0%
TGCAGAAGACTCTGAGCTAA+AGG + chr3_1:80231750-80231769 Msa0379240:CDS 45.0%
TGAGCTAAAGGCTCTCTTTG+AGG + chr3_1:80231762-80231781 Msa0379240:CDS 45.0%
TGGAGGCAGTATAAAGGGTT+CGG - chr3_1:80231916-80231935 None:intergenic 45.0%
GATGCTTGGAGGCAGTATAA+AGG - chr3_1:80231922-80231941 None:intergenic 45.0%
CATAACAAACCCACGATGCT+TGG - chr3_1:80231936-80231955 None:intergenic 45.0%
! TTGCATTTTGTGCTGCCCTT+AGG - chr3_1:80231973-80231992 None:intergenic 45.0%
TGGCCAATATCCTTCTCTGT+AGG - chr3_1:80232267-80232286 None:intergenic 45.0%
ACAGAGAAGGATATTGGCCA+TGG + chr3_1:80232267-80232286 Msa0379240:CDS 45.0%
GCTTCTCTCCGTTCATTGAA+TGG + chr3_1:80232533-80232552 Msa0379240:CDS 45.0%
AAGCAGATCAAGCTTGAACC+TGG + chr3_1:80232572-80232591 Msa0379240:CDS 45.0%
ATTGCAATCCTAGGATGACC+AGG - chr3_1:80232593-80232612 None:intergenic 45.0%
AGCCACCATATTGCAATCCT+AGG - chr3_1:80232602-80232621 None:intergenic 45.0%
GGACAAGATGAACCTGATCT+TGG + chr3_1:80232891-80232910 Msa0379240:CDS 45.0%
TTTACAGCCGGACTATCTTC+TGG + chr3_1:80233022-80233041 Msa0379240:intron 45.0%
! TCTGGAGTTATTGCATCTGG+TGG + chr3_1:80233040-80233059 Msa0379240:CDS 45.0%
TATTGCATCTGGTGGAAGCT+TGG + chr3_1:80233048-80233067 Msa0379240:CDS 45.0%
TCTGGTGGAAGCTTGGAAAA+TGG + chr3_1:80233055-80233074 Msa0379240:CDS 45.0%
AGTATTTCCAACACCGCAAG+AGG + chr3_1:80233157-80233176 Msa0379240:CDS 45.0%
GTATTTCCAACACCGCAAGA+GGG + chr3_1:80233158-80233177 Msa0379240:CDS 45.0%
TATTTCCAACACCGCAAGAG+GGG + chr3_1:80233159-80233178 Msa0379240:CDS 45.0%
CGATACTCAGGCAAAGAATG+AGG - chr3_1:80233259-80233278 None:intergenic 45.0%
! TCTTTGCCTGAGTATCGTGA+TGG + chr3_1:80233262-80233281 Msa0379240:CDS 45.0%
GCTAAACCATCACGATACTC+AGG - chr3_1:80233271-80233290 None:intergenic 45.0%
ATGGCTGCCAATATTGGAAC+TGG + chr3_1:80233328-80233347 Msa0379240:CDS 45.0%
ATCTGATGGCAGGCATATTC+AGG + chr3_1:80233363-80233382 Msa0379240:CDS 45.0%
TCTGATGGCAGGCATATTCA+GGG + chr3_1:80233364-80233383 Msa0379240:CDS 45.0%
TGGGTAGTAAGAGGCTGAAA+AGG + chr3_1:80233800-80233819 Msa0379240:intron 45.0%
!! GATAAAGCTGATGATGGGGA+AGG - chr3_1:80233917-80233936 None:intergenic 45.0%
GCAATCTCCATCAAATGCTG+TGG + chr3_1:80233965-80233984 Msa0379240:CDS 45.0%
CTCCATCAAATGCTGTGGTT+TGG + chr3_1:80233970-80233989 Msa0379240:CDS 45.0%
TGCCAAACCACAGCATTTGA+TGG - chr3_1:80233975-80233994 None:intergenic 45.0%
TGGATCAGCACCAGTTGTTA+CGG + chr3_1:80234106-80234125 Msa0379240:CDS 45.0%
! TTGGGTTCTCTAGGAAATGC+AGG + chr3_1:80234191-80234210 Msa0379240:CDS 45.0%
! ATGCAGGTTTTCATGGTAGC+TGG + chr3_1:80234207-80234226 Msa0379240:CDS 45.0%
! ATGTTGCTTGAAAGATCCGG+AGG - chr3_1:80234242-80234261 None:intergenic 45.0%
AGTTGTCACATGTCTTCCCT+GGG + chr3_1:80234327-80234346 Msa0379240:CDS 45.0%
! TCTTGTCTTGCTCTTTTGCC+TGG + chr3_1:80234657-80234676 Msa0379240:intron 45.0%
TTTGCCTGGTAACACTTACG+AGG + chr3_1:80234671-80234690 Msa0379240:intron 45.0%
GTATCCTCGTAAGTGTTACC+AGG - chr3_1:80234678-80234697 None:intergenic 45.0%
CAGCCATAGATGAGAGTTGT+CGG + chr3_1:80234887-80234906 Msa0379240:CDS 45.0%
AGCCATAGATGAGAGTTGTC+GGG + chr3_1:80234888-80234907 Msa0379240:CDS 45.0%
TCTCAAGTAACCTGGTGGAA+TGG - chr3_1:80235097-80235116 None:intergenic 45.0%
AGAGTTCTCAAGTAACCTGG+TGG - chr3_1:80235102-80235121 None:intergenic 45.0%
! TTTCTCGTGCAGGCTTTTCA+TGG + chr3_1:80235175-80235194 Msa0379240:intron 45.0%
! TTCTCGTGCAGGCTTTTCAT+GGG + chr3_1:80235176-80235195 Msa0379240:intron 45.0%
CTTGCATATGCCCGAATTCA+AGG + chr3_1:80235238-80235257 Msa0379240:CDS 45.0%
CAGCATTTGGACCATCTGTA+TGG - chr3_1:80235339-80235358 None:intergenic 45.0%
CATACAGATGGTCCAAATGC+TGG + chr3_1:80235337-80235356 Msa0379240:CDS 45.0%
TTTACCGGATCACCAGCATT+TGG - chr3_1:80235352-80235371 None:intergenic 45.0%
AAGCAGATGGAGATAGCAAC+AGG - chr3_1:80235404-80235423 None:intergenic 45.0%
CCGGGAAAATTACGTAGTAG+TGG + chr3_1:80235772-80235791 Msa0379240:CDS 45.0%
ATTACGTAGTAGTGGCAACG+AGG + chr3_1:80235780-80235799 Msa0379240:CDS 45.0%
AATGCAGAGGAGTTTGCAAG+TGG + chr3_1:80235838-80235857 Msa0379240:CDS 45.0%
TGTGTGAGAGAGAGAAGAGT+TGG + chr3_1:80235977-80235996 Msa0379240:three_prime_UTR 45.0%
! GAAACGAGGGCTCACAATTT+TGG + chr3_1:80236012-80236031 Msa0379240:three_prime_UTR 45.0%
TGAAGGTCGAGGTACATAAC+TGG + chr3_1:80236061-80236080 Msa0379240:three_prime_UTR 45.0%
!! GTGAGCATTGGCGTCTTTAT+AGG + chr3_1:80236320-80236339 Msa0379240:three_prime_UTR 45.0%
!!! TATTATTTATATTGATTAAT+TGG + chr3_1:80234735-80234754 Msa0379240:intron 5.0%
AAACCAAACCAGAGAGCGAC+CGG + chr3_1:80228639-80228658 Msa0379240:five_prime_UTR 50.0%
GAAGAGTAGAGGCGAATCTC+CGG - chr3_1:80228682-80228701 None:intergenic 50.0%
AAGCAGTAGTAACACCCCTC+TGG - chr3_1:80229828-80229847 None:intergenic 50.0%
GAACTTTACTGTCGTTGCCC+AGG + chr3_1:80230383-80230402 Msa0379240:intron 50.0%
AGTGAAATGGCAGCTTCACC+TGG + chr3_1:80230795-80230814 Msa0379240:CDS 50.0%
GAAGTGTGCAAAATGCCTCC+AGG - chr3_1:80230816-80230835 None:intergenic 50.0%
!! TTTTGGTGCACAAGCTGGCA+TGG + chr3_1:80230917-80230936 Msa0379240:CDS 50.0%
GCACATCAGACCATGATCTC+GGG - chr3_1:80230983-80231002 None:intergenic 50.0%
! CAGCCAGCATCTAGCTCATA+TGG + chr3_1:80231008-80231027 Msa0379240:CDS 50.0%
!! TTCCTTTTCTGGTGGGGTTC+TGG - chr3_1:80231273-80231292 None:intergenic 50.0%
! TCTTGGTGCAGTGAGGTTCT+TGG + chr3_1:80231366-80231385 Msa0379240:intron 50.0%
! CTTGGTGCAGTGAGGTTCTT+GGG + chr3_1:80231367-80231386 Msa0379240:intron 50.0%
GCAGTGAGGTTCTTGGGAAA+TGG + chr3_1:80231373-80231392 Msa0379240:intron 50.0%
!! TACTGCTGGTTCTCTTCCTG+AGG + chr3_1:80231417-80231436 Msa0379240:CDS 50.0%
!!! CTGTTTTCCGGTGTCACTGA+TGG + chr3_1:80231511-80231530 Msa0379240:CDS 50.0%
!! TCCGGTGTCACTGATGGTTT+AGG + chr3_1:80231517-80231536 Msa0379240:CDS 50.0%
! GATTTGTTCAGCAGTGGTGG+AGG + chr3_1:80231583-80231602 Msa0379240:CDS 50.0%
GATGGTGATCCTGCTTACTC+TGG + chr3_1:80231655-80231674 Msa0379240:CDS 50.0%
TGGTGATCCTGCTTACTCTG+GGG + chr3_1:80231657-80231676 Msa0379240:CDS 50.0%
! TATACTGCCTCCAAGCATCG+TGG + chr3_1:80231923-80231942 Msa0379240:CDS 50.0%
! ATACTGCCTCCAAGCATCGT+GGG + chr3_1:80231924-80231943 Msa0379240:CDS 50.0%
AACAAACCCACGATGCTTGG+AGG - chr3_1:80231933-80231952 None:intergenic 50.0%
!!! TGTTGGTTTTCGCCCCCTTT+TGG + chr3_1:80232388-80232407 Msa0379240:intron 50.0%
AGCTTGAACCTGGTCATCCT+AGG + chr3_1:80232582-80232601 Msa0379240:CDS 50.0%
AAGGCAGCTGTGATGCAGAT+AGG - chr3_1:80233096-80233115 None:intergenic 50.0%
!! GGATCCACAGAAGCATCTGA+TGG + chr3_1:80233349-80233368 Msa0379240:CDS 50.0%
!! GTTAATGGCGTTGGTTCTCC+TGG + chr3_1:80234011-80234030 Msa0379240:CDS 50.0%
GATGCTCTCAGCATATGAGC+CGG - chr3_1:80234068-80234087 None:intergenic 50.0%
!! CAACTGGTGCTGATCCAACA+TGG - chr3_1:80234103-80234122 None:intergenic 50.0%
GGATCAGCACCAGTTGTTAC+GGG + chr3_1:80234107-80234126 Msa0379240:CDS 50.0%
AGTTGTTACGGGATCACCCT+GGG + chr3_1:80234118-80234137 Msa0379240:CDS 50.0%
! TTGACATCCAGTGTTGGGCA+TGG + chr3_1:80234293-80234312 Msa0379240:CDS 50.0%
CAGTTGTCACATGTCTTCCC+TGG + chr3_1:80234326-80234345 Msa0379240:CDS 50.0%
AAGTCATGGGAAGTCTCCCA+GGG - chr3_1:80234346-80234365 None:intergenic 50.0%
GCCATAGATGAGAGTTGTCG+GGG + chr3_1:80234889-80234908 Msa0379240:CDS 50.0%
TCCCCGACAACTCTCATCTA+TGG - chr3_1:80234893-80234912 None:intergenic 50.0%
TGGTCCAAATGCTGGTGATC+CGG + chr3_1:80235345-80235364 Msa0379240:CDS 50.0%
!! GGTCGCTCTCTGGTTTGGTT+TGG - chr3_1:80228640-80228659 None:intergenic 55.0%
GAAATGGCAGCTTCACCTGG+AGG + chr3_1:80230798-80230817 Msa0379240:CDS 55.0%
TGGCATGGTAGATGCGCTGA+AGG + chr3_1:80230932-80230951 Msa0379240:CDS 55.0%
TACAGCAGATGCCCCTCTTG+CGG - chr3_1:80233173-80233192 None:intergenic 55.0%
CCTGCCATCAGATGCTTCTG+TGG - chr3_1:80233356-80233375 None:intergenic 55.0%
!! CCACAGAAGCATCTGATGGC+AGG + chr3_1:80233353-80233372 Msa0379240:CDS 55.0%
CTAGGCATCTGAGGAAGACC+AGG - chr3_1:80234032-80234051 None:intergenic 55.0%
CTGGGAAAGCTAGGCATCTG+AGG - chr3_1:80234041-80234060 None:intergenic 55.0%
! CTCAGATGCCTAGCTTTCCC+AGG + chr3_1:80234039-80234058 Msa0379240:CDS 55.0%
AGCATATGAGCCGGTGTCCT+GGG - chr3_1:80234059-80234078 None:intergenic 55.0%
CAGGGTGATCCCGTAACAAC+TGG - chr3_1:80234119-80234138 None:intergenic 55.0%
CAGTTGTTACGGGATCACCC+TGG + chr3_1:80234117-80234136 Msa0379240:CDS 55.0%
TAGCTGGCAGTTGCATCCTC+CGG + chr3_1:80234223-80234242 Msa0379240:CDS 55.0%
GAAGTCATGGGAAGTCTCCC+AGG - chr3_1:80234347-80234366 None:intergenic 55.0%
TGTCTTCCCCACGCGATATG+CGG - chr3_1:80234478-80234497 None:intergenic 55.0%
! GTGCAGGAGCCTTTTCCCTT+AGG + chr3_1:80235730-80235749 Msa0379240:intron 55.0%
AACGAGGAGAGCCGTAGTCA+AGG + chr3_1:80235796-80235815 Msa0379240:CDS 55.0%
ACGAGGAGAGCCGTAGTCAA+GGG + chr3_1:80235797-80235816 Msa0379240:CDS 55.0%
GAGAGAAGAGTTGGAGCAGC+CGG + chr3_1:80235986-80236005 Msa0379240:three_prime_UTR 55.0%
TGTGAGCCCTCGTTTCCTAC+CGG - chr3_1:80236008-80236027 None:intergenic 55.0%
GGCGAGGTTGTTATGCTCGC+CGG - chr3_1:80228661-80228680 None:intergenic 60.0%
GGCGAGCATAACAACCTCGC+CGG + chr3_1:80228660-80228679 Msa0379240:five_prime_UTR 60.0%
GCTTTCACGTGCGCCTGCAT+TGG - chr3_1:80231057-80231076 None:intergenic 60.0%
CGCCAGAACCCCACCAGAAA+AGG + chr3_1:80231268-80231287 Msa0379240:intron 60.0%
! GTTCAGCAGTGGTGGAGGCA+TGG + chr3_1:80231588-80231607 Msa0379240:CDS 60.0%
! CAGTGGTGGAGGCATGGAGT+TGG + chr3_1:80231594-80231613 Msa0379240:CDS 60.0%
! GGTGGAGGCATGGAGTTGGA+AGG + chr3_1:80231598-80231617 Msa0379240:CDS 60.0%
AGATGCCCCTCTTGCGGTGT+TGG - chr3_1:80233167-80233186 None:intergenic 60.0%
! GCCTAGCTTTCCCAGGACAC+CGG + chr3_1:80234046-80234065 Msa0379240:CDS 60.0%
CAGCATATGAGCCGGTGTCC+TGG - chr3_1:80234060-80234079 None:intergenic 60.0%
GGAGAGTCTCCTGATGCTCC+TGG + chr3_1:80234161-80234180 Msa0379240:CDS 60.0%
AGGAGAGCCATGCCCAACAC+TGG - chr3_1:80234303-80234322 None:intergenic 60.0%
ACCTAGGCCGCATATCGCGT+GGG + chr3_1:80234468-80234487 Msa0379240:CDS 60.0%
GAAGAGTTGGAGCAGCCGGT+AGG + chr3_1:80235990-80236009 Msa0379240:three_prime_UTR 60.0%
GAGCAGCCGGTAGGAAACGA+GGG + chr3_1:80235999-80236018 Msa0379240:three_prime_UTR 60.0%
TCGCCGGTCGCTCTCTGGTT+TGG - chr3_1:80228645-80228664 None:intergenic 65.0%
TATGCTCGCCGGTCGCTCTC+TGG - chr3_1:80228650-80228669 None:intergenic 65.0%
GTAGAGGCGAATCTCCGGCG+AGG - chr3_1:80228677-80228696 None:intergenic 65.0%
CGAACGTGTGTGGGGGTGGT+GGG - chr3_1:80231242-80231261 None:intergenic 65.0%
GCCGGTGTCCTGGGAAAGCT+AGG - chr3_1:80234050-80234069 None:intergenic 65.0%
GACCTAGGCCGCATATCGCG+TGG + chr3_1:80234467-80234486 Msa0379240:CDS 65.0%
CCTAGGCCGCATATCGCGTG+GGG + chr3_1:80234469-80234488 Msa0379240:CDS 65.0%
GGAGCAGCCGGTAGGAAACG+AGG + chr3_1:80235998-80236017 Msa0379240:three_prime_UTR 65.0%
GCGAACGTGTGTGGGGGTGG+TGG - chr3_1:80231243-80231262 None:intergenic 70.0%
CGTGCGAACGTGTGTGGGGG+TGG - chr3_1:80231246-80231265 None:intergenic 70.0%
GCGCGTGCGAACGTGTGTGG+GGG - chr3_1:80231249-80231268 None:intergenic 70.0%
CGCGCGTGCGAACGTGTGTG+GGG - chr3_1:80231250-80231269 None:intergenic 70.0%
GCGCGCGTGCGAACGTGTGT+GGG - chr3_1:80231251-80231270 None:intergenic 70.0%
CCCCACGCGATATGCGGCCT+AGG - chr3_1:80234472-80234491 None:intergenic 70.0%
GGCGCGCGTGCGAACGTGTG+TGG - chr3_1:80231252-80231271 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 80228499 80236410 80228499 ID=Msa0379240;Name=Msa0379240
chr3_1 mRNA 80228499 80236410 80228499 ID=Msa0379240-mRNA-1;Parent=Msa0379240;Name=Msa0379240-mRNA-1;_AED=0.11;_eAED=0.11;_QI=602|1|1|1|0.92|0.86|15|510|968
chr3_1 exon 80228499 80229011 80228499 ID=Msa0379240-mRNA-1:exon:19985;Parent=Msa0379240-mRNA-1
chr3_1 exon 80229716 80229885 80229716 ID=Msa0379240-mRNA-1:exon:19986;Parent=Msa0379240-mRNA-1
chr3_1 exon 80230055 80230106 80230055 ID=Msa0379240-mRNA-1:exon:19987;Parent=Msa0379240-mRNA-1
chr3_1 exon 80230790 80231119 80230790 ID=Msa0379240-mRNA-1:exon:19988;Parent=Msa0379240-mRNA-1
chr3_1 exon 80231377 80231783 80231377 ID=Msa0379240-mRNA-1:exon:19989;Parent=Msa0379240-mRNA-1
chr3_1 exon 80231899 80232057 80231899 ID=Msa0379240-mRNA-1:exon:19990;Parent=Msa0379240-mRNA-1
chr3_1 exon 80232258 80232374 80232258 ID=Msa0379240-mRNA-1:exon:19991;Parent=Msa0379240-mRNA-1
chr3_1 exon 80232467 80232615 80232467 ID=Msa0379240-mRNA-1:exon:19992;Parent=Msa0379240-mRNA-1
chr3_1 exon 80232869 80232951 80232869 ID=Msa0379240-mRNA-1:exon:19993;Parent=Msa0379240-mRNA-1
chr3_1 exon 80233029 80233427 80233029 ID=Msa0379240-mRNA-1:exon:19994;Parent=Msa0379240-mRNA-1
chr3_1 exon 80233904 80234534 80233904 ID=Msa0379240-mRNA-1:exon:19995;Parent=Msa0379240-mRNA-1
chr3_1 exon 80234864 80234948 80234864 ID=Msa0379240-mRNA-1:exon:19996;Parent=Msa0379240-mRNA-1
chr3_1 exon 80235037 80235105 80235037 ID=Msa0379240-mRNA-1:exon:19997;Parent=Msa0379240-mRNA-1
chr3_1 exon 80235187 80235366 80235187 ID=Msa0379240-mRNA-1:exon:19998;Parent=Msa0379240-mRNA-1
chr3_1 exon 80235736 80236410 80235736 ID=Msa0379240-mRNA-1:exon:19999;Parent=Msa0379240-mRNA-1
chr3_1 five_prime_UTR 80228499 80229011 80228499 ID=Msa0379240-mRNA-1:five_prime_utr;Parent=Msa0379240-mRNA-1
chr3_1 five_prime_UTR 80229716 80229804 80229716 ID=Msa0379240-mRNA-1:five_prime_utr;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80229805 80229885 80229805 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80230055 80230106 80230055 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80230790 80231119 80230790 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80231377 80231783 80231377 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80231899 80232057 80231899 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80232258 80232374 80232258 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80232467 80232615 80232467 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80232869 80232951 80232869 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80233029 80233427 80233029 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80233904 80234534 80233904 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80234864 80234948 80234864 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80235037 80235105 80235037 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80235187 80235366 80235187 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 CDS 80235736 80235900 80235736 ID=Msa0379240-mRNA-1:cds;Parent=Msa0379240-mRNA-1
chr3_1 three_prime_UTR 80235901 80236410 80235901 ID=Msa0379240-mRNA-1:three_prime_utr;Parent=Msa0379240-mRNA-1
Gene Sequence

>Msa0379240

ATGCCTTTTGAAATAATGAACCAGAGGGGTGTTACTACTGCTTCATCCCATCTTTATGATGATGTTTCCTATGCTTCTGAGAGGAATGTTGGATTAAGGAAGCCAAAATCTATTCATGATGATTATCCACAAGGGAAGAGTGAAATGGCAGCTTCACCTGGAGGCATTTTGCACACTTCATCAACCCTCGAAAGAAATGCAAAAATAGGCTTGCCAATGTCACAGACTAGTTTATCCGGGGAAGTTTTAGAAAACGTACATTTTGGTGCACAAGCTGGCATGGTAGATGCGCTGAAGGATTCAAAGGAATCTTTGAATTATCACCCGAGATCATGGTCTGATGTGCATAGGCAGCCAGCATCTAGCTCATATGGTTTAATTGGGAACAAGATTGTCACCAATGCAGGCGCACGTGAAAGCAGTCTATTCTCAAGCTCACTGTCCGATATGTTTAGCCAAAAGTTGAGGTTCTTGGGAAATGGTGTTCAGTCTGATCAGAATATTACTGCTGGTTCTCTTCCTGAGGAAGAACCATACAAATCTCTTGAAGAAATTGAGGCTGACACTATAGGGGATCTCCTTCCTGACGAAGATGATCTGTTTTCCGGTGTCACTGATGGTTTAGGAAGCAGTGCTCATGCTAGAGCAAGTGATGATTTTGAAGATTTTGATTTGTTCAGCAGTGGTGGAGGCATGGAGTTGGAAGGAGATGAACTTTCAGGAAAAAGAATCAGTGGCTTGGATGGTGATCCTGCTTACTCTGGGGCTTTTAAAGGCAAAAGTTCTTTTGGTGAACAATCTTCTAGAACACTTTTTGTTGGAAACATTACTTGCAATGCAGAAGACTCTGAGCTAAAGGCTCTCTTTGAGCAATATGGAGATATCCGAACCCTTTATACTGCCTCCAAGCATCGTGGGTTTGTTATGATTTCTTACTATGACCTAAGGGCAGCACAAAATGCAATGAAAGCACTTCAAAATAGGACATTGAGTTCTAGGAAACTGGATATACGTTATTCAATTCCAAAGGGAAATCCTACAGAGAAGGATATTGGCCATGGTACACTGATGATATCTGGTCTTGATTCATCTGTTTTGAAAGACGAACTAAAACGTATTTTTGGATTTTATGGAGAAATCAAAGAGATCTATGAATATCCAGAGATGAATCATATCAAATATATTGAATTTTATGATGTTCGAGGTGCAGAAGCTTCTCTCCGTTCATTGAATGGAATGTGCATTGCTGGAAAGCAGATCAAGCTTGAACCTGGTCATCCTAGGATTGCAATATGTATGACTCAGCCATCTCAAAAGGGACAAGATGAACCTGATCTTGGTCATAATCTCAATGACATCTTATTCTTAAGACAGAAGGCCGGACTATCTTCTGGAGTTATTGCATCTGGTGGAAGCTTGGAAAATGGATATAATCAAAGATTCCTATCTGCATCACAGCTGCCTTTGAATGCTTTCTTCGATAACACAAATTTTCACGTGAATTCTAGTATTTCCAACACCGCAAGAGGGGCATCTGCTGTAAAAGTATCTGGTGACTCCAGTAATGTCGATGCAATGAAATTTGCATCTATTCCAAGATTGCACCCTCATTCTTTGCCTGAGTATCGTGATGGTTTAGCTAATGGCAGTCCTTACAATTTGTCAAACACCATTAAAATGGCTGCCAATATTGGAACTGGATCCACAGAAGCATCTGATGGCAGGCATATTCAGGGAATGATCTCAACTGGGAACTTAGCAGATTTTAATGCAGGAGGAAATGGGAGCCTTCCCCATCATCAGCTTTATCATATGTGGAATGGCTCAAACTTGCGTCAGCAATCTCCATCAAATGCTGTGGTTTGGCAGAAAACGCCATCTTTTGTTAATGGCGTTGGTTCTCCTGGTCTTCCTCAGATGCCTAGCTTTCCCAGGACACCGGCTCATATGCTGAGAGCATCACATATTGAACACCATGTTGGATCAGCACCAGTTGTTACGGGATCACCCTGGGAAAGACAACATTCTTACTTGGGAGAGTCTCCTGATGCTCCTGGTTTTAGATTGGGTTCTCTAGGAAATGCAGGTTTTCATGGTAGCTGGCAGTTGCATCCTCCGGATCTTTCAAGCAACATGTTTTCTCATATTGGTGGGAATGGTAACGATTTGACATCCAGTGTTGGGCATGGCTCTCCTAAGCAGTTGTCACATGTCTTCCCTGGGAGACTTCCCATGACTTCAATGTCGAAATTTGATTCTACCAATGAACGAATGAGAAACTTCTATCATCGTAGAAGTGAAGCGAACAATAACAATGCTGATAAAAAACAATTTGAACTCGACCTAGGCCGCATATCGCGTGGGGAAGACAATCGAACAACGCTGATGATAAAAAATATTCCCAACAAGTATACTTCAAAGATGCTTCTTACAGCCATAGATGAGAGTTGTCGGGGAACTTATGATTTTCTGTATTTGCCAATTGATTTCAAAAACAAGTGTAATGTTGGCTATGCATTCATCAACATGATTGATCCTGGTCAAATAATTCCATTCCACCAGGCTTTTCATGGGAAAAAATGGGAGAAGTTTAACAGTGAAAAGGTAGCAGTACTTGCATATGCCCGAATTCAAGGAAAATCTGCTCTTATTGCTCATTTCCAGAATTCAAGCCTGATGAATGAAGATAAACGTTGCCGCCCTATTCTATTCCATACAGATGGTCCAAATGCTGGTGATCCGGAGCCTTTTCCCTTAGGTGCAAATATTAGAGTAAGGCCGGGAAAATTACGTAGTAGTGGCAACGAGGAGAGCCGTAGTCAAGGGAATTCTTCAACTTTGGCAAATGCAGAGGAGTTTGCAAGTGGAATAGATTCTTCACCAAGTTCTTCAAGAGACACTGACTGA
Protein sequence

>Msa0379240

MPFEIMNQRGVTTASSHLYDDVSYASERNVGLRKPKSIHDDYPQGKSEMAASPGGILHTSSTLERNAKIGLPMSQTSLSGEVLENVHFGAQAGMVDALKDSKESLNYHPRSWSDVHRQPASSSYGLIGNKIVTNAGARESSLFSSSLSDMFSQKLRFLGNGVQSDQNITAGSLPEEEPYKSLEEIEADTIGDLLPDEDDLFSGVTDGLGSSAHARASDDFEDFDLFSSGGGMELEGDELSGKRISGLDGDPAYSGAFKGKSSFGEQSSRTLFVGNITCNAEDSELKALFEQYGDIRTLYTASKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTEKDIGHGTLMISGLDSSVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLRSLNGMCIAGKQIKLEPGHPRIAICMTQPSQKGQDEPDLGHNLNDILFLRQKAGLSSGVIASGGSLENGYNQRFLSASQLPLNAFFDNTNFHVNSSISNTARGASAVKVSGDSSNVDAMKFASIPRLHPHSLPEYRDGLANGSPYNLSNTIKMAANIGTGSTEASDGRHIQGMISTGNLADFNAGGNGSLPHHQLYHMWNGSNLRQQSPSNAVVWQKTPSFVNGVGSPGLPQMPSFPRTPAHMLRASHIEHHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNAGFHGSWQLHPPDLSSNMFSHIGGNGNDLTSSVGHGSPKQLSHVFPGRLPMTSMSKFDSTNERMRNFYHRRSEANNNNADKKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYDFLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPLGANIRVRPGKLRSSGNEESRSQGNSSTLANAEEFASGIDSSPSSSRDTD*