AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0379870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379870 MtrunA17_Chr3g0132991 96.285 323 10 2 1 321 683 1005 0.0 631
Msa0379870 MtrunA17_Chr5g0427421 52.727 55 26 0 14 68 185 239 8.03e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 244 sgRNAs with CRISPR-Local

Find 797 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGAACAATTTATGTATT+TGG 0.160728 3_1:+81290897 Msa0379870:CDS
CATCTTCCTCACCGATAAAT+AGG 0.173877 3_1:-81279733 None:intergenic
ACGCTGTAAGAGACGCTATT+TGG 0.193083 3_1:-81279653 None:intergenic
CTTTCGAAAGCTGGCTGATT+TGG 0.211316 3_1:+81285821 Msa0379870:five_prime_UTR
CATTTCAACGTGTTCGTAAA+TGG 0.213736 3_1:+81285880 Msa0379870:five_prime_UTR
ATGTGAAATACTTGGCTATT+TGG 0.217172 3_1:+81284298 Msa0379870:five_prime_UTR
AAGAAAACTACTTACAAAAT+TGG 0.231631 3_1:-81289664 None:intergenic
GCCTCTTGCAGAGAGATTTC+TGG 0.233621 3_1:-81291015 None:intergenic
TTGCATATGGATTCTATAAA+AGG 0.237496 3_1:+81286207 Msa0379870:five_prime_UTR
ATGTGATCTGTTTATGTATC+AGG 0.249500 3_1:-81284269 None:intergenic
ATATCAGAAGCAGCACTTAT+TGG 0.263492 3_1:-81282588 None:intergenic
GATGGTCAGATAGATATTTC+TGG 0.287289 3_1:+81291366 Msa0379870:CDS
TTATCCATATATCTACAAAT+TGG 0.288050 3_1:-81291661 None:intergenic
TTTGGCAACTCACCAGCTTC+AGG 0.297977 3_1:+81280842 Msa0379870:five_prime_UTR
CTTCCAAGGGATTGTGGAAA+TGG 0.319364 3_1:+81290979 Msa0379870:CDS
CAGGTGATACAGAAGATATT+GGG 0.329863 3_1:+81291061 Msa0379870:CDS
TCAGGTGATACAGAAGATAT+TGG 0.331413 3_1:+81291060 Msa0379870:CDS
TTCTGGTAACCATCACAATT+AGG 0.336621 3_1:-81291441 None:intergenic
AATTTCAAAACCCTATTTAT+CGG 0.337364 3_1:+81279722 Msa0379870:five_prime_UTR
GACTCCATTATGAGGTTTGA+TGG 0.339663 3_1:+81291249 Msa0379870:CDS
TGACACCAACCGAGTTGATC+TGG 0.352010 3_1:-81282136 None:intergenic
CGCTGTAAGAGACGCTATTT+GGG 0.355916 3_1:-81279652 None:intergenic
GAAAACTTGGTTACTTTGAA+TGG 0.356668 3_1:-81289642 None:intergenic
TCTTGGTAAATTATATAATC+AGG 0.358542 3_1:-81283730 None:intergenic
TTGAGCATCTTGAGTTCAAC+AGG 0.358785 3_1:+81290374 Msa0379870:five_prime_UTR
GAAATTATGGCAGTCTTCAT+TGG 0.360814 3_1:+81286022 Msa0379870:intron
ACAGTGATTCTCCTGACTAA+TGG 0.364707 3_1:-81282309 None:intergenic
TTTGCATCCGAAATACTAGA+TGG 0.373644 3_1:-81285852 None:intergenic
GCTTGTTCCTCAGAAATATC+AGG 0.374889 3_1:-81291579 None:intergenic
AAAAGTAAATTTATTTGAAA+AGG 0.380449 3_1:+81285908 Msa0379870:five_prime_UTR
ACAGCATCAGCATCCCCTTT+AGG 0.381092 3_1:-81285312 None:intergenic
ACGAGCCAGATTGATCCTTC+AGG 0.381822 3_1:+81282407 Msa0379870:five_prime_UTR
TCTCGAAGTCTTCGATTTCA+AGG 0.386144 3_1:+81279776 Msa0379870:five_prime_UTR
GAGAGTGAATATCTCCATTC+TGG 0.388925 3_1:-81291458 None:intergenic
GCCCCGTGTAATAATTATCT+TGG 0.389994 3_1:-81283747 None:intergenic
CTGAATACTGCCATGAAGAT+TGG 0.392865 3_1:+81291088 Msa0379870:CDS
CAATGTTTCAACTGCATGTA+TGG 0.396699 3_1:+81283804 Msa0379870:five_prime_UTR
ACTTACAAAATTGGAAAACT+TGG 0.397236 3_1:-81289655 None:intergenic
AATCAAAATTATCAAGTGAT+AGG 0.399290 3_1:-81289384 None:intergenic
TTGAATGGATTGAAAGTAAG+AGG 0.400476 3_1:-81289627 None:intergenic
ATGAAGTCATCTATCCTAAA+GGG 0.401879 3_1:+81285298 Msa0379870:five_prime_UTR
GATATCAAGGAATGCAAATC+AGG 0.403856 3_1:+81284007 Msa0379870:five_prime_UTR
GGTGCCCTGCATATTGCATA+TGG 0.405120 3_1:+81286194 Msa0379870:five_prime_UTR
GGAAGATGACGAAACTAAAT+CGG 0.407018 3_1:+81284695 Msa0379870:five_prime_UTR
GATCATGCAGGCGAAACTTC+AGG 0.408863 3_1:+81284032 Msa0379870:five_prime_UTR
ATCTTCCTCACCGATAAATA+GGG 0.413468 3_1:-81279732 None:intergenic
ACGAGGCCTTTGATCTTGAA+TGG 0.413685 3_1:+81283830 Msa0379870:five_prime_UTR
TTCTGCCTCACAAGATGCTA+TGG 0.414044 3_1:-81291118 None:intergenic
ATAATTTCAGTTTCACTGAA+TGG 0.414641 3_1:+81282722 Msa0379870:intron
CTATGACCGACCAGAGAATA+GGG 0.419780 3_1:+81282355 Msa0379870:five_prime_UTR
CGAGGCCTTTGATCTTGAAT+GGG 0.420587 3_1:+81283831 Msa0379870:five_prime_UTR
GAAAATATTGAGAATGGAAC+TGG 0.420627 3_1:+81290349 Msa0379870:five_prime_UTR
TTTGAAATTCCGTACTCGTT+CGG 0.421804 3_1:-81279708 None:intergenic
AAACATAAGAGAAAACAAAA+AGG 0.424469 3_1:-81289486 None:intergenic
ATAGATATTTCTGGTTCTGC+TGG 0.426970 3_1:+81291186 Msa0379870:CDS
GCGTCAAAACCTTCCCATGC+TGG 0.429353 3_1:+81290397 Msa0379870:five_prime_UTR
TAATAGGAAGACACAGATCT+TGG 0.430244 3_1:+81290877 Msa0379870:intron
GGATCAATCTGGCTCGTCTC+AGG 0.430351 3_1:-81282401 None:intergenic
AAAGTGAAGAATTCTGAGTT+AGG 0.430539 3_1:+81282266 Msa0379870:five_prime_UTR
TTCAAGTGTGTATACACAAA+TGG 0.432155 3_1:-81289352 None:intergenic
TTTATGTATCAGGGACCAAT+TGG 0.435267 3_1:-81284259 None:intergenic
CACATCAACACAGGGAATAG+TGG 0.436889 3_1:-81282168 None:intergenic
TTGTGTATACACACTTGAAA+AGG 0.437751 3_1:+81289356 Msa0379870:five_prime_UTR
TGGGCTCATTCCAATCTTCA+TGG 0.438190 3_1:-81291098 None:intergenic
TCAATCAAATTCCATTAGTC+AGG 0.442248 3_1:+81282298 Msa0379870:five_prime_UTR
TTCTAATATACCATTGGAGC+AGG 0.443482 3_1:-81286251 None:intergenic
ACTATGACCGACCAGAGAAT+AGG 0.445383 3_1:+81282354 Msa0379870:five_prime_UTR
TTGCAGTTGTTGATTCCAAT+TGG 0.445416 3_1:+81284244 Msa0379870:five_prime_UTR
AGATATTCACTCTCCCTGTC+TGG 0.449003 3_1:+81291467 Msa0379870:CDS
TTTCTCAAGACTCCATTATG+AGG 0.454553 3_1:+81291241 Msa0379870:CDS
ATAGATATTTCTGGTTCTGC+TGG 0.455371 3_1:+81291375 Msa0379870:CDS
GATATGCCGTACTTTATTGT+GGG 0.456699 3_1:+81289444 Msa0379870:five_prime_UTR
GTAACCATCAAACCTCATAA+TGG 0.457479 3_1:-81291253 None:intergenic
GGATATGCCGTACTTTATTG+TGG 0.460610 3_1:+81289443 Msa0379870:five_prime_UTR
GATGAAGTCATCTATCCTAA+AGG 0.462397 3_1:+81285297 Msa0379870:five_prime_UTR
GTTTGACTTCCACCTGAAGC+TGG 0.465356 3_1:-81280854 None:intergenic
ATAGAAATGACTCTATTGTC+TGG 0.467501 3_1:+81290427 Msa0379870:exon
ATTCCGTACTCGTTCGGACT+CGG 0.468008 3_1:-81279702 None:intergenic
CCACAATCCCTTGGAAGGTA+AGG 0.468475 3_1:-81290973 None:intergenic
CGTCAAAACCTTCCCATGCT+GGG 0.468834 3_1:+81290398 Msa0379870:five_prime_UTR
CGCTTGAGATAAGCTTCAGC+AGG 0.471468 3_1:-81290232 None:intergenic
TTTCCAACACCCTCGGTTGT+GGG 0.476200 3_1:+81291216 Msa0379870:CDS
GTCCCATTTCCACAATCCCT+TGG 0.476755 3_1:-81290982 None:intergenic
AGAATCCATATGCAATATGC+AGG 0.477774 3_1:-81286199 None:intergenic
TCTTGCTGTGGCAACTGTCA+TGG 0.479269 3_1:-81289543 None:intergenic
CCCGGGTTGTTAAAAGATTG+AGG 0.480157 3_1:-81290466 None:intergenic
GTTGTTCCTGCTGTAGTACC+TGG 0.482047 3_1:-81290514 None:intergenic
TTCACTGAATGGTTGTGGAT+TGG 0.482378 3_1:+81282733 Msa0379870:five_prime_UTR
CCTTACCTTCCAAGGGATTG+TGG 0.482777 3_1:+81290973 Msa0379870:CDS
TACATCGAAAATATTGAGAA+TGG 0.485387 3_1:+81290343 Msa0379870:five_prime_UTR
ATGATCGCTGGTCAAAAGAT+TGG 0.486843 3_1:-81290549 None:intergenic
CTTCAGCAAGGAAGAGCTCT+AGG 0.487355 3_1:-81289602 None:intergenic
AGAGTTGGACAACGCGCTTA+AGG 0.489701 3_1:+81286173 Msa0379870:five_prime_UTR
ACAGCTACTTGTGGGAAGAA+TGG 0.490613 3_1:+81288954 Msa0379870:intron
GAATCGTACTTGAAGTTCAC+AGG 0.492016 3_1:-81285945 None:intergenic
AAAATGCTCTGTATTTGCTA+TGG 0.492188 3_1:-81291163 None:intergenic
TAAAGATTAATGTGATATCA+AGG 0.492506 3_1:+81283994 Msa0379870:five_prime_UTR
TCCAGCCACTTGTTGGAAGT+TGG 0.493854 3_1:-81290929 None:intergenic
TGATATTCACTCTCCCTGTC+AGG 0.494966 3_1:+81291281 Msa0379870:CDS
AGGCGAGTTATGCCTCTAGA+AGG 0.495087 3_1:+81291612 Msa0379870:CDS
GTATCACCTGAGGCACTACT+TGG 0.495697 3_1:-81291048 None:intergenic
CAAAAGTTCCTAGCATATGA+TGG 0.496948 3_1:-81289323 None:intergenic
TTCCAAGGGATTGTGGAAAT+GGG 0.497011 3_1:+81290980 Msa0379870:CDS
TCACCGAGTCCGAACGAGTA+CGG 0.497308 3_1:+81279699 Msa0379870:five_prime_UTR
GTGTAACTCCAGCCACTTGT+TGG 0.498116 3_1:-81290936 None:intergenic
TTCTATTCCCTCCCCAGCAT+GGG 0.499439 3_1:-81290410 None:intergenic
TGATATTGACAGCTACTTGT+GGG 0.500465 3_1:+81288946 Msa0379870:intron
TTTCTCTTGTAGTATGGATG+TGG 0.501527 3_1:+81284674 Msa0379870:intron
GTTCTTTGCCTTACCTTCCA+AGG 0.501969 3_1:+81290965 Msa0379870:CDS
AATTGTGATGGTTACCAGAA+TGG 0.502585 3_1:+81291444 Msa0379870:CDS
ACCAACTTCCAACAAGTGGC+TGG 0.507932 3_1:+81290928 Msa0379870:CDS
TTCTTTGCCTTACCTTCCAA+GGG 0.508158 3_1:+81290966 Msa0379870:CDS
CGAGCCAGATTGATCCTTCA+GGG 0.508542 3_1:+81282408 Msa0379870:five_prime_UTR
ATGGAAAGAAAGACATAAAG+AGG 0.509158 3_1:+81288973 Msa0379870:five_prime_UTR
GTGTCATTAACGAATGTGTC+TGG 0.511432 3_1:-81285369 None:intergenic
ATCTCTGAATGTGAAATACT+TGG 0.513333 3_1:+81284290 Msa0379870:five_prime_UTR
TAATGTGGTAGTTTCCTGAC+AGG 0.516439 3_1:-81291295 None:intergenic
CTGAATGGTTGTGGATTGGA+TGG 0.516758 3_1:+81282737 Msa0379870:five_prime_UTR
AGATCCTTGAGAACCATGCC+CGG 0.517384 3_1:-81290484 None:intergenic
TCATCACCAAGTAGTGCCTC+AGG 0.517524 3_1:+81291042 Msa0379870:CDS
TCAGTTTCACTGAATGGTTG+TGG 0.519776 3_1:+81282728 Msa0379870:intron
GGATAGATGACTTCATCAAA+AGG 0.520124 3_1:-81285291 None:intergenic
TTTGAGCCAGGTACTACAGC+AGG 0.521418 3_1:+81290508 Msa0379870:CDS
TACCAAGATAATTATTACAC+GGG 0.524247 3_1:+81283745 Msa0379870:five_prime_UTR
CACTATTCCCTGTGTTGATG+TGG 0.524260 3_1:+81282169 Msa0379870:five_prime_UTR
GACGATGGTAAGATGATTGA+TGG 0.524627 3_1:+81291549 Msa0379870:CDS
TCTCAAGAACCTAATTGTGA+TGG 0.525869 3_1:+81291432 Msa0379870:CDS
GAGACCCTGAAGGATCAATC+TGG 0.528731 3_1:-81282412 None:intergenic
CGAGTTCAGATATCAGCCTC+TGG 0.528803 3_1:-81290264 None:intergenic
CAACCCGGGCATGGTTCTCA+AGG 0.530042 3_1:+81290480 Msa0379870:CDS
TTTCAACAGCATGTGAAGGA+TGG 0.531405 3_1:-81289408 None:intergenic
CTAGTTGTATCCCTATTCTC+TGG 0.532283 3_1:-81282365 None:intergenic
CTGAGGAACAAGCTGCGAAA+CGG 0.533603 3_1:+81291589 Msa0379870:CDS
CTAGGTAGTGCAGCAGAAAG+AGG 0.536010 3_1:-81289584 None:intergenic
TTTCTATTCCCTCCCCAGCA+TGG 0.536676 3_1:-81290411 None:intergenic
CATTTCCACAATCCCTTGGA+AGG 0.537487 3_1:-81290978 None:intergenic
ATTCCCTCCCCAGCATGGGA+AGG 0.539807 3_1:-81290406 None:intergenic
AATGATCTTACCGTGGGTGA+AGG 0.541838 3_1:-81279865 None:intergenic
ACATCAACACAGGGAATAGT+GGG 0.544813 3_1:-81282167 None:intergenic
ATTCCCTGTGTTGATGTGGT+TGG 0.547692 3_1:+81282173 Msa0379870:five_prime_UTR
AAAAGTTACACTACACTGGA+TGG 0.548219 3_1:-81282434 None:intergenic
ATTCCCACAACCGAGGGTGT+TGG 0.548886 3_1:-81291219 None:intergenic
TGGTAAGATGATTGATGGTA+CGG 0.551064 3_1:+81291554 Msa0379870:CDS
GACACCAACCGAGTTGATCT+GGG 0.551967 3_1:-81282135 None:intergenic
CGTGAAATCTCATCCTCTGA+TGG 0.553794 3_1:+81290304 Msa0379870:five_prime_UTR
AGAAAGACATAAAGAGGCAT+CGG 0.553805 3_1:+81288979 Msa0379870:five_prime_UTR
AAACCCCTCGTTCGAAACAA+TGG 0.554774 3_1:+81282226 Msa0379870:five_prime_UTR
AAACAAGAAAATGTATTACA+AGG 0.554857 3_1:+81280873 Msa0379870:five_prime_UTR
TCTTCGCTTCTACCTTCTAG+AGG 0.555994 3_1:-81291624 None:intergenic
CTGATATTGACAGCTACTTG+TGG 0.556622 3_1:+81288945 Msa0379870:intron
ATGATCTTACCGTGGGTGAA+GGG 0.560701 3_1:-81279864 None:intergenic
AAATGCTCTGTATTTGCTAT+GGG 0.562539 3_1:-81291162 None:intergenic
AAAACCTTCCCATGCTGGGG+AGG 0.563359 3_1:+81290402 Msa0379870:five_prime_UTR
TCTTCCATTGTTTCGAACGA+GGG 0.563561 3_1:-81282230 None:intergenic
TTGTTGGAAGTTGGTATCTG+TGG 0.564914 3_1:-81290920 None:intergenic
AGCGATAATCAGATGATCGC+TGG 0.566868 3_1:-81290561 None:intergenic
GCATATTTCAGATAAAGAGT+TGG 0.567659 3_1:+81286158 Msa0379870:intron
GATCCTTGAGAACCATGCCC+GGG 0.570927 3_1:-81290483 None:intergenic
CAGTAACCCACAATAAAGTA+CGG 0.575903 3_1:-81289450 None:intergenic
ATCTTCCATTGTTTCGAACG+AGG 0.576520 3_1:-81282231 None:intergenic
TCTGCCTCACAAGATGCTAT+GGG 0.577729 3_1:-81291117 None:intergenic
TGTGATCTGTTTATGTATCA+GGG 0.577802 3_1:-81284268 None:intergenic
ATCTATCTGACCATCGCAAG+CGG 0.580669 3_1:-81291358 None:intergenic
TACTGTGGGAGTTTCCAGAC+AGG 0.580777 3_1:-81291481 None:intergenic
AAACCTTCCCATGCTGGGGA+GGG 0.581514 3_1:+81290403 Msa0379870:five_prime_UTR
TTAATAGTCATATGTCATCC+TGG 0.582928 3_1:+81286048 Msa0379870:five_prime_UTR
AATTCCCCATTCAAGATCAA+AGG 0.584989 3_1:-81283836 None:intergenic
GAAGATGACGAAACTAAATC+GGG 0.585369 3_1:+81284696 Msa0379870:five_prime_UTR
GACTCAATCCATCATATGCT+AGG 0.586988 3_1:+81289315 Msa0379870:five_prime_UTR
AAAATAAAATACCGCATCAG+AGG 0.588316 3_1:-81282786 None:intergenic
CATATGTCATCCTGGTGAAG+TGG 0.590235 3_1:+81286056 Msa0379870:five_prime_UTR
TTGTATCCCTATTCTCTGGT+CGG 0.592897 3_1:-81282361 None:intergenic
ACCAGAAATCTCTCTGCAAG+AGG 0.593473 3_1:+81291014 Msa0379870:CDS
CGCCTCTGACACCTCTGATG+CGG 0.594770 3_1:+81282775 Msa0379870:five_prime_UTR
ATTCCCACGACTGAGGATGT+TGG 0.595833 3_1:-81291408 None:intergenic
GCAAATCAGGTAGATCATGC+AGG 0.596709 3_1:+81284020 Msa0379870:five_prime_UTR
CAAGAAAACTCATATGATTG+TGG 0.597824 3_1:+81289561 Msa0379870:five_prime_UTR
GATGATGAGACCGCTTGCGA+TGG 0.600955 3_1:+81291348 Msa0379870:CDS
ATGAGATTTCACGTGAACCA+TGG 0.601955 3_1:-81290294 None:intergenic
ACTGCCAACCACATCAACAC+AGG 0.601967 3_1:-81282177 None:intergenic
AGATACCAACTTCCAACAAG+TGG 0.603863 3_1:+81290924 Msa0379870:CDS
TTGCCAACATCCTCAGTCGT+GGG 0.608437 3_1:+81291405 Msa0379870:CDS
TTTGCCAACATCCTCAGTCG+TGG 0.610051 3_1:+81291404 Msa0379870:CDS
CAAAACCCTATTTATCGGTG+AGG 0.611347 3_1:+81279727 Msa0379870:five_prime_UTR
TACCGCATCAGAGGTGTCAG+AGG 0.613927 3_1:-81282777 None:intergenic
TTACCAAGATAATTATTACA+CGG 0.613969 3_1:+81283744 Msa0379870:five_prime_UTR
GTCAAAACCTTCCCATGCTG+GGG 0.614821 3_1:+81290399 Msa0379870:five_prime_UTR
GAATCCATATGCAATATGCA+GGG 0.617188 3_1:-81286198 None:intergenic
TTAAAATTAACCACTTCACC+AGG 0.618089 3_1:-81286066 None:intergenic
CTTCCATTGTTTCGAACGAG+GGG 0.618257 3_1:-81282229 None:intergenic
TCCAGATGCCCAGATCAACT+CGG 0.618613 3_1:+81282127 Msa0379870:intron
GGCAACTCACCAGCTTCAGG+TGG 0.622778 3_1:+81280845 Msa0379870:five_prime_UTR
ATAGCAGACAATACCGCAAG+GGG 0.623428 3_1:-81289043 None:intergenic
ATGAGGTTTGATGGTTACAA+TGG 0.625470 3_1:+81291258 Msa0379870:CDS
GAGGAGGCAGCATGCGACGA+TGG 0.628693 3_1:+81291534 Msa0379870:CDS
AGGAACAAGCTGCGAAACGG+AGG 0.628909 3_1:+81291592 Msa0379870:CDS
GAGGCTGATATCTGAACTCG+TGG 0.629107 3_1:+81290267 Msa0379870:five_prime_UTR
TTGAGAAATTCCCACGACTG+AGG 0.630357 3_1:-81291415 None:intergenic
GATGCCCAGATCAACTCGGT+TGG 0.630827 3_1:+81282131 Msa0379870:intron
TTCTGATGCAGTAGACGAGG+AGG 0.634390 3_1:+81291518 Msa0379870:CDS
GAGGCCTTTGATCTTGAATG+GGG 0.639721 3_1:+81283832 Msa0379870:five_prime_UTR
AATCTCGATCCCTTCACCCA+CGG 0.641124 3_1:+81279855 Msa0379870:five_prime_UTR
TGAGAAATTCCCACAACCGA+GGG 0.645223 3_1:-81291225 None:intergenic
GATGACGAAACTAAATCGGG+TGG 0.649914 3_1:+81284699 Msa0379870:five_prime_UTR
TATAGCAGACAATACCGCAA+GGG 0.650245 3_1:-81289044 None:intergenic
TTGAGAAATTCCCACAACCG+AGG 0.651002 3_1:-81291226 None:intergenic
AAGTAAGAGGAGCTTCAGCA+AGG 0.651363 3_1:-81289614 None:intergenic
CTATGTGAGAAGGTTAACAT+TGG 0.651579 3_1:-81283769 None:intergenic
TGAAGTCATCTATCCTAAAG+GGG 0.652761 3_1:+81285299 Msa0379870:five_prime_UTR
ACTGTCATGGAGTAAGCACT+AGG 0.653314 3_1:-81289530 None:intergenic
AACTGCATGTATGGAGCACG+AGG 0.653847 3_1:+81283813 Msa0379870:five_prime_UTR
AGGTGATACAGAAGATATTG+GGG 0.654215 3_1:+81291062 Msa0379870:CDS
GTACTTTCTTCAGAGTGGAA+CGG 0.654333 3_1:+81283965 Msa0379870:intron
AACTTGATGCAATGTTACTG+TGG 0.655923 3_1:-81291496 None:intergenic
CTGCCAACCACATCAACACA+GGG 0.657590 3_1:-81282176 None:intergenic
TCTGAAGAATCAGATACAAG+AGG 0.658211 3_1:+81285761 Msa0379870:five_prime_UTR
GAAGAATCAGATACAAGAGG+AGG 0.661004 3_1:+81285764 Msa0379870:five_prime_UTR
TCTGAACTCGTGGAAAACCA+TGG 0.661929 3_1:+81290277 Msa0379870:five_prime_UTR
TACTACAGCAGGAACAACAT+CGG 0.662535 3_1:+81290519 Msa0379870:CDS
AACTTGATGCCATGTTAATG+TGG 0.663961 3_1:-81291310 None:intergenic
GCTTCTGATATTGCAGAGAA+CGG 0.665326 3_1:+81282600 Msa0379870:five_prime_UTR
TCAAGCGAACACTGATCCAG+AGG 0.666862 3_1:+81290248 Msa0379870:five_prime_UTR
AATGTGGTAGTTTCCTGACA+GGG 0.668078 3_1:-81291294 None:intergenic
ACACTGGATGGAGACCCTGA+AGG 0.668886 3_1:-81282422 None:intergenic
CTTGATGCAACTATGTGAGA+AGG 0.670181 3_1:-81283779 None:intergenic
GTGATCATCACTACCATCAG+AGG 0.671831 3_1:-81290317 None:intergenic
TACGGAACCTGATATTTCTG+AGG 0.671954 3_1:+81291572 Msa0379870:CDS
ACTGTGGGAGTTTCCAGACA+GGG 0.673211 3_1:-81291480 None:intergenic
AATCGTACTTGAAGTTCACA+GGG 0.674039 3_1:-81285944 None:intergenic
AGGTAAGGCAAAGAACATTG+AGG 0.679924 3_1:-81290958 None:intergenic
GCATCTTGTGAGGCAGAACG+AGG 0.680779 3_1:+81291123 Msa0379870:CDS
AATATCTTCTGTATCACCTG+AGG 0.687145 3_1:-81291058 None:intergenic
AGGAAACTACCACATTAACA+TGG 0.687711 3_1:+81291301 Msa0379870:CDS
TGAGCCCATAGCATCTTGTG+AGG 0.687976 3_1:+81291113 Msa0379870:CDS
AAATTATATAATCAGGACGA+AGG 0.689515 3_1:-81283723 None:intergenic
ACTTGATGCAATGTTACTGT+GGG 0.696862 3_1:-81291495 None:intergenic
AGTTTCTGATGCAGTAGACG+AGG 0.702716 3_1:+81291515 Msa0379870:CDS
GAGAATAGGGATACAACTAG+TGG 0.706816 3_1:+81282368 Msa0379870:five_prime_UTR
ACCAAGATAATTATTACACG+GGG 0.708112 3_1:+81283746 Msa0379870:five_prime_UTR
TGAGCATCTTGAGTTCAACA+GGG 0.743931 3_1:+81290375 Msa0379870:five_prime_UTR
CATCAACACAGGGAATAGTG+GGG 0.755362 3_1:-81282166 None:intergenic
TCTATAAAAGGAAATCACAG+CGG 0.767722 3_1:+81286219 Msa0379870:five_prime_UTR
TAGCAGACAATACCGCAAGG+GGG 0.771280 3_1:-81289042 None:intergenic
AAGACTTCGAGATCTCTACG+TGG 0.784795 3_1:-81279765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTACTTTTTTTTTTAAGAA+CGG + chr3_1:81280113-81280132 Msa0379870:intron 10.0%
!! GAATATTAATAATATTAATG+AGG + chr3_1:81280239-81280258 Msa0379870:intron 10.0%
!! TAATATTTCCAAATAAAAAA+TGG - chr3_1:81282673-81282692 None:intergenic 10.0%
!! AAAAGTAAATTTATTTGAAA+AGG + chr3_1:81285908-81285927 Msa0379870:five_prime_UTR 10.0%
!!! AAAATTTTAAGTTAATCAAA+TGG - chr3_1:81286970-81286989 None:intergenic 10.0%
!! GTATAATACTATTAATTAAA+AGG - chr3_1:81287663-81287682 None:intergenic 10.0%
!! AGTAAAATAATAATTATACA+TGG - chr3_1:81287766-81287785 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAAAACA+AGG - chr3_1:81288872-81288891 None:intergenic 10.0%
!! AAAATCAATATTAAAATTGT+CGG - chr3_1:81290143-81290162 None:intergenic 10.0%
!!! TTTAGTAATTTCATTTTTCA+AGG + chr3_1:81280035-81280054 Msa0379870:intron 15.0%
!! ATATGAAATTATAAAAGGAA+AGG + chr3_1:81280287-81280306 Msa0379870:intron 15.0%
!! TTAATGCTTATTTATTTAAG+AGG - chr3_1:81281034-81281053 None:intergenic 15.0%
!! CTGCAAAAAAAAAAAAAAAT+TGG - chr3_1:81282511-81282530 None:intergenic 15.0%
!! TAAAGAAATATTTGATGTAA+TGG - chr3_1:81283031-81283050 None:intergenic 15.0%
!! ATCAAATATTTCTTTATAAG+AGG + chr3_1:81283035-81283054 Msa0379870:intron 15.0%
!!! TCTAAATGAATTTTATACTA+AGG + chr3_1:81283470-81283489 Msa0379870:intron 15.0%
!! TATAATATTGTTAGATAAAG+TGG - chr3_1:81283529-81283548 None:intergenic 15.0%
!!! ATTGTTATTTAAATACACTT+TGG + chr3_1:81284114-81284133 Msa0379870:intron 15.0%
!! AAATAGATAATCATGTATAT+AGG + chr3_1:81285553-81285572 Msa0379870:intron 15.0%
!! TATTAAGAAAAGAAAATTGT+AGG + chr3_1:81285671-81285690 Msa0379870:intron 15.0%
!! ATTAAGAAAAGAAAATTGTA+GGG + chr3_1:81285672-81285691 Msa0379870:intron 15.0%
!! CTATTAAAAAAATGAAATCT+AGG - chr3_1:81285795-81285814 None:intergenic 15.0%
!!! TTCATAGAATATTTCTATTT+TGG + chr3_1:81287621-81287640 Msa0379870:intron 15.0%
!!! TCATAGAATATTTCTATTTT+GGG + chr3_1:81287622-81287641 Msa0379870:intron 15.0%
!! TAAATAAGTAAAAACCTTAA+AGG + chr3_1:81287820-81287839 Msa0379870:intron 15.0%
!! AAATTAACTTTATTATGCAT+TGG - chr3_1:81287905-81287924 None:intergenic 15.0%
!! AATGCATAATAAAGTTAATT+TGG + chr3_1:81287904-81287923 Msa0379870:intron 15.0%
!! TATTAATATAAGTCTATAAG+TGG - chr3_1:81287952-81287971 None:intergenic 15.0%
!!! CCTTATTTATTAATTTTGTT+AGG - chr3_1:81288321-81288340 None:intergenic 15.0%
!! CCTAACAAAATTAATAAATA+AGG + chr3_1:81288318-81288337 Msa0379870:intron 15.0%
!!! ATAAATTTTGTTACTTTTGA+TGG - chr3_1:81288531-81288550 None:intergenic 15.0%
!! CATAATATATACATTCATTT+GGG - chr3_1:81288815-81288834 None:intergenic 15.0%
!!! TTGTTTCAATTTTCTATTTT+TGG + chr3_1:81289905-81289924 Msa0379870:intron 15.0%
!!! TTATCTGTTTTAATATTACA+AGG + chr3_1:81290008-81290027 Msa0379870:intron 15.0%
!!! TATCTGTTTTAATATTACAA+GGG + chr3_1:81290009-81290028 Msa0379870:intron 15.0%
!! TAAAACAGATAAATATAACT+AGG - chr3_1:81290102-81290121 None:intergenic 15.0%
!!! ATAATTTGTAAAAAAAGTGA+TGG - chr3_1:81290827-81290846 None:intergenic 15.0%
!! AATTTCAAAACCCTATTTAT+CGG + chr3_1:81279722-81279741 Msa0379870:five_prime_UTR 20.0%
!!! AATCTATTGAGATTTTTATC+GGG - chr3_1:81279822-81279841 None:intergenic 20.0%
!!! GAATCTATTGAGATTTTTAT+CGG - chr3_1:81279823-81279842 None:intergenic 20.0%
!! AGGTCATATGAAATTATAAA+AGG + chr3_1:81280282-81280301 Msa0379870:intron 20.0%
!!! TATAAAATTTGTTTACCCTA+AGG + chr3_1:81280313-81280332 Msa0379870:intron 20.0%
!!! ATAAAATTTGTTTACCCTAA+GGG + chr3_1:81280314-81280333 Msa0379870:intron 20.0%
!! ATGATATAGTAATAACAGAA+CGG - chr3_1:81280689-81280708 None:intergenic 20.0%
!! AATACGGTAATAAGTAATAA+CGG - chr3_1:81280753-81280772 None:intergenic 20.0%
!!! ATTACTTATTACCGTATTTT+AGG + chr3_1:81280755-81280774 Msa0379870:intron 20.0%
!! ACAAAATTATGCCTAAAATA+CGG - chr3_1:81280769-81280788 None:intergenic 20.0%
!!! ATTTTAGGCATAATTTTGTT+TGG + chr3_1:81280770-81280789 Msa0379870:intron 20.0%
!!! TTTTAGGCATAATTTTGTTT+GGG + chr3_1:81280771-81280790 Msa0379870:intron 20.0%
!! AAACAAGAAAATGTATTACA+AGG + chr3_1:81280873-81280892 Msa0379870:five_prime_UTR 20.0%
!! TATACAAAAAAACAGCATAT+AGG + chr3_1:81281173-81281192 Msa0379870:intron 20.0%
!! TTTAATTAATTCGGATCTAA+CGG - chr3_1:81281346-81281365 None:intergenic 20.0%
!! TCCGAATTAATTAAAATTAG+CGG + chr3_1:81281351-81281370 Msa0379870:intron 20.0%
!!! TCCGCTAATTTTAATTAATT+CGG - chr3_1:81281355-81281374 None:intergenic 20.0%
!!! TATTTCATTATTTTGTCACA+GGG - chr3_1:81281490-81281509 None:intergenic 20.0%
!!! ATATTTCATTATTTTGTCAC+AGG - chr3_1:81281491-81281510 None:intergenic 20.0%
!! GTGACAAAATAATGAAATAT+CGG + chr3_1:81281491-81281510 Msa0379870:intron 20.0%
!! ATGTCTAATTATTAAAACAG+TGG + chr3_1:81281646-81281665 Msa0379870:intron 20.0%
!!! TTATTTTGAATGGCTTTAAA+TGG - chr3_1:81281704-81281723 None:intergenic 20.0%
!!! ATGGAGTTATTTATTTTGAA+TGG - chr3_1:81281714-81281733 None:intergenic 20.0%
!! ATTTCCTTTCTTCTTATAAA+GGG - chr3_1:81281876-81281895 None:intergenic 20.0%
!! AATTTCCTTTCTTCTTATAA+AGG - chr3_1:81281877-81281896 None:intergenic 20.0%
!!! TATAAGAAGAAAGGAAATTT+TGG + chr3_1:81281878-81281897 Msa0379870:intron 20.0%
!!! ATAAGAAGAAAGGAAATTTT+GGG + chr3_1:81281879-81281898 Msa0379870:intron 20.0%
!!! AAAAAAAACTAGCTTAAAGA+TGG - chr3_1:81282071-81282090 None:intergenic 20.0%
!!! CAAATCTACCATTTTTTATT+TGG + chr3_1:81282662-81282681 Msa0379870:intron 20.0%
!! TCAAAGGAAACTTATAAAAA+AGG - chr3_1:81283002-81283021 None:intergenic 20.0%
!! TCTAATACTCACTTATTTAA+TGG + chr3_1:81283090-81283109 Msa0379870:intron 20.0%
!! TTCTCATGTGTAAAATAAAT+GGG - chr3_1:81283260-81283279 None:intergenic 20.0%
!! TTTCTCATGTGTAAAATAAA+TGG - chr3_1:81283261-81283280 None:intergenic 20.0%
!! TAATACAAAAAGTAAGATAG+TGG + chr3_1:81283329-81283348 Msa0379870:intron 20.0%
!! AAAAATTCCCTTATAAGTAT+TGG - chr3_1:81283365-81283384 None:intergenic 20.0%
!! TTCCTTAATATATGTGAATT+GGG + chr3_1:81283441-81283460 Msa0379870:intron 20.0%
!!! ATAAAATGCTTTTATCATGT+TGG + chr3_1:81283597-81283616 Msa0379870:intron 20.0%
!! TCTTGGTAAATTATATAATC+AGG - chr3_1:81283733-81283752 None:intergenic 20.0%
!! TTACCAAGATAATTATTACA+CGG + chr3_1:81283744-81283763 Msa0379870:five_prime_UTR 20.0%
!! TAAAGATTAATGTGATATCA+AGG + chr3_1:81283994-81284013 Msa0379870:five_prime_UTR 20.0%
!!! TGTATGCATATACTTATTTT+AGG + chr3_1:81284204-81284223 Msa0379870:intron 20.0%
!!! ATGTTTATTACTTTTTTCCT+TGG + chr3_1:81284354-81284373 Msa0379870:intron 20.0%
!!! TTTTTATCAACTATAGTTGT+TGG + chr3_1:81284447-81284466 Msa0379870:intron 20.0%
!!! TTTTATCAACTATAGTTGTT+GGG + chr3_1:81284448-81284467 Msa0379870:intron 20.0%
!!! TCACAGTTAAAGTTTATTTT+TGG + chr3_1:81284559-81284578 Msa0379870:intron 20.0%
!!! CACAGTTAAAGTTTATTTTT+GGG + chr3_1:81284560-81284579 Msa0379870:intron 20.0%
!! TGCAAATATATTAATTACGT+TGG - chr3_1:81284646-81284665 None:intergenic 20.0%
!!! TAAGTAAACTTGTTTAAATG+GGG - chr3_1:81284767-81284786 None:intergenic 20.0%
!!! CTAAGTAAACTTGTTTAAAT+GGG - chr3_1:81284768-81284787 None:intergenic 20.0%
!!! TCTAAGTAAACTTGTTTAAA+TGG - chr3_1:81284769-81284788 None:intergenic 20.0%
!!! TTTTAAAAGGGTAAAGATAA+AGG - chr3_1:81285485-81285504 None:intergenic 20.0%
!!! ACACATTCAAGTTTTTAAAA+GGG - chr3_1:81285497-81285516 None:intergenic 20.0%
!!! AACACATTCAAGTTTTTAAA+AGG - chr3_1:81285498-81285517 None:intergenic 20.0%
!! AATAAAATCAAGTAAATGAG+AGG - chr3_1:81286277-81286296 None:intergenic 20.0%
!! AAAGAGAATAAAAAGCAATA+CGG - chr3_1:81286328-81286347 None:intergenic 20.0%
!! ACACTACTTAAAAAAAATTC+CGG - chr3_1:81286352-81286371 None:intergenic 20.0%
!!! AAAAAAGTGACATCAATTTT+GGG - chr3_1:81287109-81287128 None:intergenic 20.0%
!!! AAAAAAAGTGACATCAATTT+TGG - chr3_1:81287110-81287129 None:intergenic 20.0%
!! CAATTGTACCATTTAATTAA+GGG + chr3_1:81287298-81287317 Msa0379870:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + chr3_1:81288232-81288251 Msa0379870:intron 20.0%
!! CTCTCTACAATAAATAATTA+TGG - chr3_1:81288452-81288471 None:intergenic 20.0%
!! TTTATTGTAGAGAGAAAAAT+AGG + chr3_1:81288458-81288477 Msa0379870:intron 20.0%
!! AACGAGATAAAACATAATTA+AGG + chr3_1:81288484-81288503 Msa0379870:intron 20.0%
!! ACGAGATAAAACATAATTAA+GGG + chr3_1:81288485-81288504 Msa0379870:intron 20.0%
!! ATTGGTATGTAAAAAAGAAA+GGG - chr3_1:81288725-81288744 None:intergenic 20.0%
!! ATAGAAAGATACTAATGAAA+TGG - chr3_1:81288768-81288787 None:intergenic 20.0%
!! GCATAATATATACATTCATT+TGG - chr3_1:81288816-81288835 None:intergenic 20.0%
!! TACTAGTTAATTGTATTGAA+CGG + chr3_1:81289120-81289139 Msa0379870:intron 20.0%
!! AATCAAAATTATCAAGTGAT+AGG - chr3_1:81289387-81289406 None:intergenic 20.0%
!! AAACATAAGAGAAAACAAAA+AGG - chr3_1:81289489-81289508 None:intergenic 20.0%
!! AAGAAAACTACTTACAAAAT+TGG - chr3_1:81289667-81289686 None:intergenic 20.0%
!! TTATGGAGAATCATTAAAAA+AGG + chr3_1:81289715-81289734 Msa0379870:intron 20.0%
!!! TGGTTAATTGATTTTTAGAA+TGG - chr3_1:81289759-81289778 None:intergenic 20.0%
!!! TGAAACAAAAAAAAAAGCAT+GGG - chr3_1:81289893-81289912 None:intergenic 20.0%
!! TTGAAACAAAAAAAAAAGCA+TGG - chr3_1:81289894-81289913 None:intergenic 20.0%
!!! GCTTTTTTGTTCAATTTAAT+AGG + chr3_1:81290861-81290880 Msa0379870:intron 20.0%
!! ATCTATTGAGATTTTTATCG+GGG - chr3_1:81279821-81279840 None:intergenic 25.0%
! TTGCTTAAATGGTAGAATTA+GGG - chr3_1:81279902-81279921 None:intergenic 25.0%
!! ATTTTCAGTGTTCGAAATTT+AGG + chr3_1:81279986-81280005 Msa0379870:intron 25.0%
! AATCTAACCTAATTACGAAA+TGG - chr3_1:81280017-81280036 None:intergenic 25.0%
! AGTTTAAATTGTCAAGTAGA+TGG + chr3_1:81280449-81280468 Msa0379870:intron 25.0%
!! TCTTTCATTTTGTAGAATAG+TGG - chr3_1:81280601-81280620 None:intergenic 25.0%
!! AAACAAAAACAACACTGTTT+TGG + chr3_1:81280824-81280843 Msa0379870:five_prime_UTR 25.0%
! AGAAAATGTATTACAAGGTT+TGG + chr3_1:81280878-81280897 Msa0379870:intron 25.0%
! ACTTTCAACAATAAAAGAAG+GGG - chr3_1:81280905-81280924 None:intergenic 25.0%
! CACTTTCAACAATAAAAGAA+GGG - chr3_1:81280906-81280925 None:intergenic 25.0%
! ACACTTTCAACAATAAAAGA+AGG - chr3_1:81280907-81280926 None:intergenic 25.0%
! AAAGCAAAACTACTAAACTA+AGG - chr3_1:81280958-81280977 None:intergenic 25.0%
!!! ATTTCATTATTTTGTCACAG+GGG - chr3_1:81281489-81281508 None:intergenic 25.0%
! TGCATTTGATACAAAAATGA+AGG + chr3_1:81281609-81281628 Msa0379870:intron 25.0%
! AATTATTAAAACAGTGGAGA+TGG + chr3_1:81281652-81281671 Msa0379870:intron 25.0%
!!! TCCATTGTTTTTAGTTTGTA+CGG + chr3_1:81281729-81281748 Msa0379870:intron 25.0%
! TATAATAATTGTTTGTTCCC+TGG - chr3_1:81281765-81281784 None:intergenic 25.0%
!!! ACCACTGATTTTCATTAATT+AGG + chr3_1:81281786-81281805 Msa0379870:intron 25.0%
! TCCTAATTAATGAAAATCAG+TGG - chr3_1:81281790-81281809 None:intergenic 25.0%
! GAAATGAGAACAAATAACTA+CGG - chr3_1:81281820-81281839 None:intergenic 25.0%
!! TAAGAAGAAAGGAAATTTTG+GGG + chr3_1:81281880-81281899 Msa0379870:intron 25.0%
! AGAAAGAAAGAAATGAAAAC+AGG - chr3_1:81281978-81281997 None:intergenic 25.0%
! ACAACCATTTCAATTCTATA+TGG + chr3_1:81282010-81282029 Msa0379870:intron 25.0%
! GAAACCATATAGAATTGAAA+TGG - chr3_1:81282017-81282036 None:intergenic 25.0%
! AAACAAGAACAATTATGTCA+AGG - chr3_1:81282039-81282058 None:intergenic 25.0%
!!! AGTATTTTAGATTTGGAAGT+AGG + chr3_1:81282197-81282216 Msa0379870:five_prime_UTR 25.0%
! ATAATTTCAGTTTCACTGAA+TGG + chr3_1:81282722-81282741 Msa0379870:intron 25.0%
! TAAATTACTCTAGCAAAGAT+AGG - chr3_1:81282824-81282843 None:intergenic 25.0%
! AATACTCACTTATTTAATGG+TGG + chr3_1:81283093-81283112 Msa0379870:intron 25.0%
!! ATTTAATGGTGGAATTCATA+TGG + chr3_1:81283104-81283123 Msa0379870:intron 25.0%
!! TTTAATGGTGGAATTCATAT+GGG + chr3_1:81283105-81283124 Msa0379870:intron 25.0%
!! TTAACACTCACTCTTTTATT+GGG - chr3_1:81283186-81283205 None:intergenic 25.0%
!! TTTAACACTCACTCTTTTAT+TGG - chr3_1:81283187-81283206 None:intergenic 25.0%
!!! TTAAGGAAGGTTTGTTAATA+TGG - chr3_1:81283429-81283448 None:intergenic 25.0%
! CAATTCACATATATTAAGGA+AGG - chr3_1:81283442-81283461 None:intergenic 25.0%
! CTTCCTTAATATATGTGAAT+TGG + chr3_1:81283440-81283459 Msa0379870:intron 25.0%
! TACCCAATTCACATATATTA+AGG - chr3_1:81283446-81283465 None:intergenic 25.0%
!! TGAATTTTATACTAAGGAAG+AGG + chr3_1:81283476-81283495 Msa0379870:intron 25.0%
!!! AGGAGATTAATTTTTTGGAT+TGG + chr3_1:81283496-81283515 Msa0379870:intron 25.0%
! AAATTATATAATCAGGACGA+AGG - chr3_1:81283726-81283745 None:intergenic 25.0%
! TACCAAGATAATTATTACAC+GGG + chr3_1:81283745-81283764 Msa0379870:five_prime_UTR 25.0%
! ATACGTATATTAACTTCTGT+CGG - chr3_1:81284140-81284159 None:intergenic 25.0%
!!! TATACTTATTTTAGGCATTG+AGG + chr3_1:81284212-81284231 Msa0379870:intron 25.0%
! TAAAATGTTGCAAAGATTTC+AGG + chr3_1:81284400-81284419 Msa0379870:intron 25.0%
! TAAACTTTAACTGTGAGAAA+TGG - chr3_1:81284555-81284574 None:intergenic 25.0%
!! TAAACTTTTCTCTTGTAGTA+TGG + chr3_1:81284668-81284687 Msa0379870:intron 25.0%
! GATGTCAAAGCAAAAAAAAT+AGG - chr3_1:81284849-81284868 None:intergenic 25.0%
! TTCATGATTCACATATCTTT+AGG + chr3_1:81285023-81285042 Msa0379870:intron 25.0%
!! AGAAACTTTAAAAATGACCA+AGG - chr3_1:81285102-81285121 None:intergenic 25.0%
!!! GATGATTTAAAACAGTTTTG+AGG + chr3_1:81285266-81285285 Msa0379870:intron 25.0%
!!! AGTTCTGAAAATCTCTAATT+TGG + chr3_1:81285732-81285751 Msa0379870:intron 25.0%
! CAAAAATCCATCTAGTATTT+CGG + chr3_1:81285845-81285864 Msa0379870:five_prime_UTR 25.0%
!! TCGATTTGTGATATTTCTTA+TGG + chr3_1:81286099-81286118 Msa0379870:intron 25.0%
! TTGCATATGGATTCTATAAA+AGG + chr3_1:81286207-81286226 Msa0379870:five_prime_UTR 25.0%
!! ATAAAAAGCAATACGGTTTT+CGG - chr3_1:81286321-81286340 None:intergenic 25.0%
!!! TTGCTTTTTATTCTCTTTTC+CGG + chr3_1:81286330-81286349 Msa0379870:intron 25.0%
! AACAAACAAAAACAGAGTAT+AGG - chr3_1:81286598-81286617 None:intergenic 25.0%
!! AAAAAGTGACATCAATTTTG+GGG - chr3_1:81287108-81287127 None:intergenic 25.0%
! AATCTTAACAGTACTAACAT+TGG - chr3_1:81287139-81287158 None:intergenic 25.0%
! TAGTACTGTTAAGATTATGT+TGG + chr3_1:81287143-81287162 Msa0379870:intron 25.0%
! CCTTAATTAAATGGTACAAT+TGG - chr3_1:81287300-81287319 None:intergenic 25.0%
! CCAATTGTACCATTTAATTA+AGG + chr3_1:81287297-81287316 Msa0379870:intron 25.0%
! TAGCATAACCCTTAATTAAA+TGG - chr3_1:81287309-81287328 None:intergenic 25.0%
!! TAATGCAAACATACTACTTT+TGG - chr3_1:81287354-81287373 None:intergenic 25.0%
! TTAGCATTTCCCTTTAATTA+AGG + chr3_1:81287481-81287500 Msa0379870:intron 25.0%
! TAGCATTTCCCTTTAATTAA+GGG + chr3_1:81287482-81287501 Msa0379870:intron 25.0%
! TAGCATTTCCCTTAATTAAA+GGG - chr3_1:81287493-81287512 None:intergenic 25.0%
! TTAGCATTTCCCTTAATTAA+AGG - chr3_1:81287494-81287513 None:intergenic 25.0%
!! CAAATGTAGAAACTTTTTGT+TGG + chr3_1:81287544-81287563 Msa0379870:intron 25.0%
!!! GACAATCATTTTAAAACAGA+GGG - chr3_1:81287725-81287744 None:intergenic 25.0%
!!! TGACAATCATTTTAAAACAG+AGG - chr3_1:81287726-81287745 None:intergenic 25.0%
!! TTACTATTCGTGTAATGTTT+TGG - chr3_1:81287803-81287822 None:intergenic 25.0%
! TTCAAAATGAATGTCCTTTA+AGG - chr3_1:81287837-81287856 None:intergenic 25.0%
!!! AAAGGACATTCATTTTGAAA+CGG + chr3_1:81287838-81287857 Msa0379870:intron 25.0%
! CAATTTCATTCATATCTTGT+TGG - chr3_1:81288133-81288152 None:intergenic 25.0%
! CAACAAGATATGAATGAAAT+TGG + chr3_1:81288131-81288150 Msa0379870:intron 25.0%
! CAACATGATATGAATGAAAT+TGG + chr3_1:81288199-81288218 Msa0379870:intron 25.0%
!!! CCTTTTTAGTTATCGTTTTA+GGG - chr3_1:81288579-81288598 None:intergenic 25.0%
!!! TCCTTTTTAGTTATCGTTTT+AGG - chr3_1:81288580-81288599 None:intergenic 25.0%
! AAAACGATAACTAAAAAGGA+AGG + chr3_1:81288580-81288599 Msa0379870:intron 25.0%
! AAACGATAACTAAAAAGGAA+GGG + chr3_1:81288581-81288600 Msa0379870:intron 25.0%
! TATGTAACAGAATCTTATCA+CGG - chr3_1:81288636-81288655 None:intergenic 25.0%
! GATTGGTATGTAAAAAAGAA+AGG - chr3_1:81288726-81288745 None:intergenic 25.0%
!! TTTTTACATACCAATCTTGA+AGG + chr3_1:81288730-81288749 Msa0379870:intron 25.0%
! ATATTGACGACTTTCAAATA+AGG + chr3_1:81289064-81289083 Msa0379870:intron 25.0%
!!! TATCTGGAAGATTTTTTATG+TGG - chr3_1:81289218-81289237 None:intergenic 25.0%
! ACTTACAAAATTGGAAAACT+TGG - chr3_1:81289658-81289677 None:intergenic 25.0%
!! TAGTTTTCTTAACTCAGTAT+TGG + chr3_1:81289677-81289696 Msa0379870:intron 25.0%
!!! GGCTTAAGTCAATATTTTTA+TGG + chr3_1:81289698-81289717 Msa0379870:intron 25.0%
! GAATCATTAAAAAAGGTCAT+TGG + chr3_1:81289722-81289741 Msa0379870:intron 25.0%
! AATATGGATAATCAATCAAG+TGG - chr3_1:81289779-81289798 None:intergenic 25.0%
! AATGGTTAATTAAGTCAATC+AGG - chr3_1:81289832-81289851 None:intergenic 25.0%
!! GATTGACTTAATTAACCATT+TGG + chr3_1:81289832-81289851 Msa0379870:intron 25.0%
!! GATTTTTACGGTTTCTTATA+TGG + chr3_1:81290157-81290176 Msa0379870:intron 25.0%
! GGAAAAATACTAGTTATGTT+AGG - chr3_1:81290189-81290208 None:intergenic 25.0%
! TACATCGAAAATATTGAGAA+TGG + chr3_1:81290343-81290362 Msa0379870:five_prime_UTR 25.0%
!! CGATAATTCAATATTTTCGA+TGG + chr3_1:81290585-81290604 Msa0379870:CDS 25.0%
!! TAATTCAATATTTTCGATGG+AGG + chr3_1:81290588-81290607 Msa0379870:CDS 25.0%
!!! TTCTGTAGTGATTTTTAACT+GGG + chr3_1:81290741-81290760 Msa0379870:intron 25.0%
! TTAAATTGAACAAAAAAGCG+AGG - chr3_1:81290860-81290879 None:intergenic 25.0%
! TGGTGAACAATTTATGTATT+TGG + chr3_1:81290897-81290916 Msa0379870:CDS 25.0%
!! GAGCATTTTATAGATATTTC+TGG + chr3_1:81291177-81291196 Msa0379870:CDS 25.0%
CTTGCTTAAATGGTAGAATT+AGG - chr3_1:81279903-81279922 None:intergenic 30.0%
! AGCTAAGAAACTTGCTTAAA+TGG - chr3_1:81279913-81279932 None:intergenic 30.0%
!! TACAAAATGCTGAGTTGATT+AGG + chr3_1:81280262-81280281 Msa0379870:intron 30.0%
CAGTTATTTAGGTCATGATA+AGG - chr3_1:81280624-81280643 None:intergenic 30.0%
CATGGTAAAGACAGTTATTT+AGG - chr3_1:81280635-81280654 None:intergenic 30.0%
TGTGCAACATAATATGAACA+TGG - chr3_1:81280653-81280672 None:intergenic 30.0%
AGATTGACAATTTCTGTTGA+GGG + chr3_1:81281007-81281026 Msa0379870:intron 30.0%
ACAGGTACATTATGAAAACT+TGG - chr3_1:81281071-81281090 None:intergenic 30.0%
! AGTTTTCATAATGTACCTGT+TGG + chr3_1:81281071-81281090 Msa0379870:intron 30.0%
!!! GTATATTTTTTGCGCAAAAG+TGG - chr3_1:81281158-81281177 None:intergenic 30.0%
!!! GTGTATTCTGTTACGTTTTT+TGG - chr3_1:81281256-81281275 None:intergenic 30.0%
!! TGAGAAAACTTTGCTATTGT+GGG + chr3_1:81281299-81281318 Msa0379870:intron 30.0%
TAAGAAACACCATTGTTATG+AGG - chr3_1:81281420-81281439 None:intergenic 30.0%
!! TTTCATTATTTTGTCACAGG+GGG - chr3_1:81281488-81281507 None:intergenic 30.0%
ATCTTATATGGCAATGATGA+AGG - chr3_1:81281519-81281538 None:intergenic 30.0%
! ACACGATGAGATTAAGATTT+TGG - chr3_1:81281579-81281598 None:intergenic 30.0%
GGTTTAGTATGAGATTTATG+AGG + chr3_1:81281673-81281692 Msa0379870:intron 30.0%
ACCGTACAAACTAAAAACAA+TGG - chr3_1:81281733-81281752 None:intergenic 30.0%
! AAGAAGAAAGGAAATTTTGG+GGG + chr3_1:81281881-81281900 Msa0379870:intron 30.0%
TGAAATGGTTGTAGAATCTT+TGG - chr3_1:81282002-81282021 None:intergenic 30.0%
AAAGTGAAGAATTCTGAGTT+AGG + chr3_1:81282266-81282285 Msa0379870:five_prime_UTR 30.0%
TCAATCAAATTCCATTAGTC+AGG + chr3_1:81282298-81282317 Msa0379870:five_prime_UTR 30.0%
AAAGAAAAGTTACACTACAC+TGG - chr3_1:81282441-81282460 None:intergenic 30.0%
CATTTCCTTAAGCATTAATC+TGG - chr3_1:81282465-81282484 None:intergenic 30.0%
CAGATTAATGCTTAAGGAAA+TGG + chr3_1:81282463-81282482 Msa0379870:intron 30.0%
GGTAGATTTGATAAGTATCA+GGG - chr3_1:81282652-81282671 None:intergenic 30.0%
TGGTAGATTTGATAAGTATC+AGG - chr3_1:81282653-81282672 None:intergenic 30.0%
AAAATAAAATACCGCATCAG+AGG - chr3_1:81282789-81282808 None:intergenic 30.0%
! ACGAAGCAATTTTGCAAATT+TGG - chr3_1:81282880-81282899 None:intergenic 30.0%
!! GATGTAATGGACTAATTCAA+AGG - chr3_1:81283018-81283037 None:intergenic 30.0%
TTATTGGGTGAAATCATTGT+GGG - chr3_1:81283171-81283190 None:intergenic 30.0%
TTTATTGGGTGAAATCATTG+TGG - chr3_1:81283172-81283191 None:intergenic 30.0%
!! AGTAAGATAGTGGAATTATG+AGG + chr3_1:81283339-81283358 Msa0379870:intron 30.0%
TTATGAGGCCAATACTTATA+AGG + chr3_1:81283354-81283373 Msa0379870:intron 30.0%
TATGAGGCCAATACTTATAA+GGG + chr3_1:81283355-81283374 Msa0379870:intron 30.0%
!!! GGAAGAGGAGATTAATTTTT+TGG + chr3_1:81283491-81283510 Msa0379870:intron 30.0%
ATGTCAATGTAAAACCATTG+AGG + chr3_1:81283553-81283572 Msa0379870:intron 30.0%
ACCAAGATAATTATTACACG+GGG + chr3_1:81283746-81283765 Msa0379870:five_prime_UTR 30.0%
TGTGATCTGTTTATGTATCA+GGG - chr3_1:81284271-81284290 None:intergenic 30.0%
ATGTGATCTGTTTATGTATC+AGG - chr3_1:81284272-81284291 None:intergenic 30.0%
ATCTCTGAATGTGAAATACT+TGG + chr3_1:81284290-81284309 Msa0379870:five_prime_UTR 30.0%
ATGTGAAATACTTGGCTATT+TGG + chr3_1:81284298-81284317 Msa0379870:five_prime_UTR 30.0%
! TGATTTGAAGTGGATATGTT+TGG + chr3_1:81284590-81284609 Msa0379870:intron 30.0%
TTAACAATTCTCACTCACTT+AGG - chr3_1:81284741-81284760 None:intergenic 30.0%
TTGTCTTCTTTAGTGCTTAT+TGG + chr3_1:81284820-81284839 Msa0379870:intron 30.0%
TCAAAACATTGAATAGACCA+AGG - chr3_1:81284907-81284926 None:intergenic 30.0%
TGCATAATTTCTCTAATCCT+TGG + chr3_1:81285082-81285101 Msa0379870:intron 30.0%
! TGTCTTATTCTTATTCTGTG+TGG + chr3_1:81285198-81285217 Msa0379870:intron 30.0%
TATTCTTATTCTGTGTGGTT+TGG + chr3_1:81285203-81285222 Msa0379870:intron 30.0%
ATTCTTATTCTGTGTGGTTT+GGG + chr3_1:81285204-81285223 Msa0379870:intron 30.0%
ATTAGCCAGCATAATGTAAT+TGG - chr3_1:81285236-81285255 None:intergenic 30.0%
ATGAAGTCATCTATCCTAAA+GGG + chr3_1:81285298-81285317 Msa0379870:five_prime_UTR 30.0%
!!! AATTTTAACTTTGTCCACCA+TGG + chr3_1:81285454-81285473 Msa0379870:intron 30.0%
CATGTTGAGAGAACAATAAA+AGG + chr3_1:81285612-81285631 Msa0379870:intron 30.0%
ATAAAAGGATTGACAATTGC+AGG + chr3_1:81285627-81285646 Msa0379870:intron 30.0%
!!! TAGTTTTTTCTTTCGAAAGC+TGG + chr3_1:81285812-81285831 Msa0379870:five_prime_UTR 30.0%
TTAATAGTCATATGTCATCC+TGG + chr3_1:81286048-81286067 Msa0379870:five_prime_UTR 30.0%
TTAAAATTAACCACTTCACC+AGG - chr3_1:81286069-81286088 None:intergenic 30.0%
! GGTGAAGTGGTTAATTTTAA+TGG + chr3_1:81286069-81286088 Msa0379870:five_prime_UTR 30.0%
!! AGTGGTTAATTTTAATGGTG+AGG + chr3_1:81286074-81286093 Msa0379870:intron 30.0%
GCATATTTCAGATAAAGAGT+TGG + chr3_1:81286158-81286177 Msa0379870:intron 30.0%
TCTATAAAAGGAAATCACAG+CGG + chr3_1:81286219-81286238 Msa0379870:five_prime_UTR 30.0%
! TAAAAAGCAATACGGTTTTC+GGG - chr3_1:81286320-81286339 None:intergenic 30.0%
!! TCTTAACTGTGTGTTTTGTT+TGG - chr3_1:81286393-81286412 None:intergenic 30.0%
TGTGATTTAGTCAGTCATTT+GGG + chr3_1:81286467-81286486 Msa0379870:intron 30.0%
! TGTTTTATCTTTTCTCGACT+TGG + chr3_1:81286505-81286524 Msa0379870:intron 30.0%
AATTAGACTACATTTGGTAG+AGG - chr3_1:81286691-81286710 None:intergenic 30.0%
CAAATGTAGTCTAATTATCC+CGG + chr3_1:81286695-81286714 Msa0379870:intron 30.0%
TGTTAAGATTATGTTGGAAG+TGG + chr3_1:81287149-81287168 Msa0379870:intron 30.0%
GTTAAGATTATGTTGGAAGT+GGG + chr3_1:81287150-81287169 Msa0379870:intron 30.0%
TAGGAGATATAATGATAGCT+TGG - chr3_1:81287231-81287250 None:intergenic 30.0%
AGCTAAAAATGACACTCATT+AGG - chr3_1:81287250-81287269 None:intergenic 30.0%
!!! GTGTCATTTTTAGCTTTCAT+TGG + chr3_1:81287255-81287274 Msa0379870:intron 30.0%
!! ACTTTTGGTTATGCTAACAA+GGG - chr3_1:81287339-81287358 None:intergenic 30.0%
!! TACTTTTGGTTATGCTAACA+AGG - chr3_1:81287340-81287359 None:intergenic 30.0%
AGAAATATTTCACTGAGAAG+TGG - chr3_1:81287425-81287444 None:intergenic 30.0%
!!! AATGTTTTGGAAGGTACAAT+TGG - chr3_1:81287790-81287809 None:intergenic 30.0%
!! TATTCGTGTAATGTTTTGGA+AGG - chr3_1:81287799-81287818 None:intergenic 30.0%
ACACTTTGCATGTATTATAC+TGG + chr3_1:81287871-81287890 Msa0379870:intron 30.0%
AACCTAATACAACAAATGAG+CGG + chr3_1:81288268-81288287 Msa0379870:intron 30.0%
TAGGGTTATTTACACATATC+AGG - chr3_1:81288561-81288580 None:intergenic 30.0%
CCCTAAAACGATAACTAAAA+AGG + chr3_1:81288576-81288595 Msa0379870:intron 30.0%
ATGGAAAGAAAGACATAAAG+AGG + chr3_1:81288973-81288992 Msa0379870:five_prime_UTR 30.0%
ACATAGATTCTACATTGTTC+AGG + chr3_1:81289168-81289187 Msa0379870:intron 30.0%
CATAGATTCTACATTGTTCA+GGG + chr3_1:81289169-81289188 Msa0379870:intron 30.0%
TGTTCATCAATATCACTATC+TGG - chr3_1:81289234-81289253 None:intergenic 30.0%
TTCAAGTGTGTATACACAAA+TGG - chr3_1:81289355-81289374 None:intergenic 30.0%
TTGTGTATACACACTTGAAA+AGG + chr3_1:81289356-81289375 Msa0379870:five_prime_UTR 30.0%
ACATGCTGTTGAAAAAACAA+AGG + chr3_1:81289417-81289436 Msa0379870:five_prime_UTR 30.0%
CAAGAAAACTCATATGATTG+TGG + chr3_1:81289561-81289580 Msa0379870:five_prime_UTR 30.0%
! GAAAACTTGGTTACTTTGAA+TGG - chr3_1:81289645-81289664 None:intergenic 30.0%
GATTATCCATATTCAATGAG+TGG + chr3_1:81289786-81289805 Msa0379870:intron 30.0%
TGACTTAATTAACCATTTGG+TGG + chr3_1:81289835-81289854 Msa0379870:intron 30.0%
GACTTAATTAACCATTTGGT+GGG + chr3_1:81289836-81289855 Msa0379870:intron 30.0%
TATTAACATCTCCCAATTTG+TGG + chr3_1:81289960-81289979 Msa0379870:intron 30.0%
AACATAAAGACAACTACACA+AGG - chr3_1:81289990-81290009 None:intergenic 30.0%
! TCTCAATATTTTCGATGTAC+TGG - chr3_1:81290342-81290361 None:intergenic 30.0%
GAAAATATTGAGAATGGAAC+TGG + chr3_1:81290349-81290368 Msa0379870:five_prime_UTR 30.0%
ATAGAAATGACTCTATTGTC+TGG + chr3_1:81290427-81290446 Msa0379870:exon 30.0%
! CTTCTGTAGTGATTTTTAAC+TGG + chr3_1:81290740-81290759 Msa0379870:intron 30.0%
!! GTGCATTGCATTTTATTTGA+TGG + chr3_1:81290763-81290782 Msa0379870:intron 30.0%
ATGGTATGAGTTTCATAACT+TGG - chr3_1:81290808-81290827 None:intergenic 30.0%
!! AAATGCTCTGTATTTGCTAT+GGG - chr3_1:81291165-81291184 None:intergenic 30.0%
! AAAATGCTCTGTATTTGCTA+TGG - chr3_1:81291166-81291185 None:intergenic 30.0%
! TTTGAAATTCCGTACTCGTT+CGG - chr3_1:81279711-81279730 None:intergenic 35.0%
ATCTTCCTCACCGATAAATA+GGG - chr3_1:81279735-81279754 None:intergenic 35.0%
GGTTTAGCCATTTCGTAATT+AGG + chr3_1:81280007-81280026 Msa0379870:intron 35.0%
TCACATACACATGTCACATA+TGG - chr3_1:81280727-81280746 None:intergenic 35.0%
!! AGGCATAATTTTGTTTGGGA+TGG + chr3_1:81280775-81280794 Msa0379870:intron 35.0%
GTTGAAATAGTTGTCGTTAG+TGG + chr3_1:81280981-81281000 Msa0379870:intron 35.0%
GAGATTGACAATTTCTGTTG+AGG + chr3_1:81281006-81281025 Msa0379870:intron 35.0%
GATTGACAATTTCTGTTGAG+GGG + chr3_1:81281008-81281027 Msa0379870:intron 35.0%
! TCATAATGTACCTGTTGGTT+TGG + chr3_1:81281076-81281095 Msa0379870:intron 35.0%
TTGGGCTTTGCAAAAAATGT+CGG - chr3_1:81281110-81281129 None:intergenic 35.0%
!!! TTTTTTGCAAAGCCCAATAC+TGG + chr3_1:81281113-81281132 Msa0379870:intron 35.0%
! TTTTTGCAAAGCCCAATACT+GGG + chr3_1:81281114-81281133 Msa0379870:intron 35.0%
TAAAATGTTCAGCCTCCAAA+AGG - chr3_1:81281208-81281227 None:intergenic 35.0%
!! GTGAGAAAACTTTGCTATTG+TGG + chr3_1:81281298-81281317 Msa0379870:intron 35.0%
GGAAATGAGACAAACAACTA+TGG + chr3_1:81281320-81281339 Msa0379870:intron 35.0%
ATCACGGTCACAATCTTATA+TGG - chr3_1:81281531-81281550 None:intergenic 35.0%
ATATGTTGTGATTGGGATCA+CGG - chr3_1:81281547-81281566 None:intergenic 35.0%
CTGGTCTATATGTTGTGATT+GGG - chr3_1:81281554-81281573 None:intergenic 35.0%
!! TGAGATTAAGATTTTGGTGC+TGG - chr3_1:81281573-81281592 None:intergenic 35.0%
CACTCCCTTTATAAGAAGAA+AGG + chr3_1:81281869-81281888 Msa0379870:intron 35.0%
!! GGTTGGCAGTATTTTAGATT+TGG + chr3_1:81282190-81282209 Msa0379870:five_prime_UTR 35.0%
AAAAGTTACACTACACTGGA+TGG - chr3_1:81282437-81282456 None:intergenic 35.0%
CTTTGCCAGATTAATGCTTA+AGG + chr3_1:81282457-81282476 Msa0379870:intron 35.0%
ATATCAGAAGCAGCACTTAT+TGG - chr3_1:81282591-81282610 None:intergenic 35.0%
ATAAGTATCAGGGATCTACT+AGG - chr3_1:81282642-81282661 None:intergenic 35.0%
AAGGCATAAAATACTGCATG+TGG - chr3_1:81282849-81282868 None:intergenic 35.0%
! ATGCAGTATTTTATGCCTTG+AGG + chr3_1:81282850-81282869 Msa0379870:intron 35.0%
GTCTTAAATTTAAGAGAGCG+TGG - chr3_1:81282958-81282977 None:intergenic 35.0%
GTATTAGAGAGAACGTTGAA+AGG - chr3_1:81283078-81283097 None:intergenic 35.0%
TATTGGGTGAAATCATTGTG+GGG - chr3_1:81283170-81283189 None:intergenic 35.0%
!!! TAATTTTTTGGATTGGTCCC+TGG + chr3_1:81283503-81283522 Msa0379870:intron 35.0%
ATTGTTAGATAAAGTGGCCA+GGG - chr3_1:81283523-81283542 None:intergenic 35.0%
TATTGTTAGATAAAGTGGCC+AGG - chr3_1:81283524-81283543 None:intergenic 35.0%
! TATGAAGTTTGAAGCCTCAA+TGG - chr3_1:81283570-81283589 None:intergenic 35.0%
CTATGTGAGAAGGTTAACAT+TGG - chr3_1:81283772-81283791 None:intergenic 35.0%
CAATGTTTCAACTGCATGTA+TGG + chr3_1:81283804-81283823 Msa0379870:five_prime_UTR 35.0%
AATTCCCCATTCAAGATCAA+AGG - chr3_1:81283839-81283858 None:intergenic 35.0%
GATATCAAGGAATGCAAATC+AGG + chr3_1:81284007-81284026 Msa0379870:five_prime_UTR 35.0%
ACATGGAGTGGTTTACAATT+TGG + chr3_1:81284080-81284099 Msa0379870:intron 35.0%
ATAGTAAACCTCTCTGTTAC+TGG + chr3_1:81284169-81284188 Msa0379870:intron 35.0%
AATTACAACCAGTAACAGAG+AGG - chr3_1:81284180-81284199 None:intergenic 35.0%
!! TTGCAGTTGTTGATTCCAAT+TGG + chr3_1:81284244-81284263 Msa0379870:five_prime_UTR 35.0%
TTTATGTATCAGGGACCAAT+TGG - chr3_1:81284262-81284281 None:intergenic 35.0%
!! AGTTGATAATTCACTCACCA+AGG - chr3_1:81284374-81284393 None:intergenic 35.0%
! GATTTCAGGTATACAACTGT+AGG + chr3_1:81284414-81284433 Msa0379870:intron 35.0%
!! GGGTTAAAGTTGATTTGAAG+TGG + chr3_1:81284580-81284599 Msa0379870:intron 35.0%
TTTCTCTTGTAGTATGGATG+TGG + chr3_1:81284674-81284693 Msa0379870:intron 35.0%
GGAAGATGACGAAACTAAAT+CGG + chr3_1:81284695-81284714 Msa0379870:five_prime_UTR 35.0%
GAAGATGACGAAACTAAATC+GGG + chr3_1:81284696-81284715 Msa0379870:five_prime_UTR 35.0%
TTCTTCCATTTCATGTTCCT+TGG + chr3_1:81284887-81284906 Msa0379870:intron 35.0%
ATAGACCAAGGAACATGAAA+TGG - chr3_1:81284895-81284914 None:intergenic 35.0%
!! ATCTGTGCTTCTGAGATATT+TGG + chr3_1:81284926-81284945 Msa0379870:intron 35.0%
!! TCCTTGATTGCTTTGTTTGT+TGG + chr3_1:81284967-81284986 Msa0379870:intron 35.0%
TCCAACAAACAAAGCAATCA+AGG - chr3_1:81284971-81284990 None:intergenic 35.0%
! GTTTGTTGGAAATGTGAAGT+TGG + chr3_1:81284981-81285000 Msa0379870:intron 35.0%
GAATAAGACAAGTACATGTG+AGG - chr3_1:81285188-81285207 None:intergenic 35.0%
TTCTTATTCTGTGTGGTTTG+GGG + chr3_1:81285205-81285224 Msa0379870:intron 35.0%
GTTCTCCAATTACATTATGC+TGG + chr3_1:81285228-81285247 Msa0379870:intron 35.0%
GGATAGATGACTTCATCAAA+AGG - chr3_1:81285294-81285313 None:intergenic 35.0%
GATGAAGTCATCTATCCTAA+AGG + chr3_1:81285297-81285316 Msa0379870:five_prime_UTR 35.0%
TGAAGTCATCTATCCTAAAG+GGG + chr3_1:81285299-81285318 Msa0379870:five_prime_UTR 35.0%
TAAAGATAAAGGAAGCTCCA+TGG - chr3_1:81285474-81285493 None:intergenic 35.0%
CTGAAAATCTCTAATTTGGC+AGG + chr3_1:81285736-81285755 Msa0379870:intron 35.0%
TCTGAAGAATCAGATACAAG+AGG + chr3_1:81285761-81285780 Msa0379870:five_prime_UTR 35.0%
TTTGCATCCGAAATACTAGA+TGG - chr3_1:81285855-81285874 None:intergenic 35.0%
CATTTCAACGTGTTCGTAAA+TGG + chr3_1:81285880-81285899 Msa0379870:five_prime_UTR 35.0%
AATCGTACTTGAAGTTCACA+GGG - chr3_1:81285947-81285966 None:intergenic 35.0%
TTCTGATCAGCGTGAAATTA+TGG + chr3_1:81286009-81286028 Msa0379870:intron 35.0%
GAAATTATGGCAGTCTTCAT+TGG + chr3_1:81286022-81286041 Msa0379870:intron 35.0%
GAATCCATATGCAATATGCA+GGG - chr3_1:81286201-81286220 None:intergenic 35.0%
AGAATCCATATGCAATATGC+AGG - chr3_1:81286202-81286221 None:intergenic 35.0%
TTCTAATATACCATTGGAGC+AGG - chr3_1:81286254-81286273 None:intergenic 35.0%
! GAGAGGTTCTAATATACCAT+TGG - chr3_1:81286260-81286279 None:intergenic 35.0%
! AAAAAGCAATACGGTTTTCG+GGG - chr3_1:81286319-81286338 None:intergenic 35.0%
GTGTGATTTAGTCAGTCATT+TGG + chr3_1:81286466-81286485 Msa0379870:intron 35.0%
GTGATTTAGTCAGTCATTTG+GGG + chr3_1:81286468-81286487 Msa0379870:intron 35.0%
ATACTTATTCCCTTGTGTTG+AGG + chr3_1:81286548-81286567 Msa0379870:intron 35.0%
ACAAAAACAGAGTATAGGTC+TGG - chr3_1:81286593-81286612 None:intergenic 35.0%
ATTTGGTAGAGGAGATGTAA+TGG - chr3_1:81286680-81286699 None:intergenic 35.0%
CGGGATAATTAGACTACATT+TGG - chr3_1:81286697-81286716 None:intergenic 35.0%
CTACTTCTGCTTCAAATTGA+GGG - chr3_1:81287015-81287034 None:intergenic 35.0%
ACTACTTCTGCTTCAAATTG+AGG - chr3_1:81287016-81287035 None:intergenic 35.0%
GAGATATAATGATAGCTTGG+TGG - chr3_1:81287228-81287247 None:intergenic 35.0%
TCCTCTTAACTAATGCCTAA+AGG + chr3_1:81287452-81287471 Msa0379870:intron 35.0%
!! AAATGCTAAAGAGTGCCTTT+AGG - chr3_1:81287470-81287489 None:intergenic 35.0%
!! CTCATTAACTTGTGCCTTAA+GGG - chr3_1:81287523-81287542 None:intergenic 35.0%
!! ACTCATTAACTTGTGCCTTA+AGG - chr3_1:81287524-81287543 None:intergenic 35.0%
!!! GACATTCATTTTGAAACGGA+TGG + chr3_1:81287842-81287861 Msa0379870:intron 35.0%
GCAAATGTGACACTAATTGT+TGG + chr3_1:81287984-81288003 Msa0379870:intron 35.0%
ATGTGACACTAATTGTTGGA+CGG + chr3_1:81287988-81288007 Msa0379870:intron 35.0%
AAGGGATTGACATACGAATA+AGG + chr3_1:81288101-81288120 Msa0379870:intron 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG + chr3_1:81288221-81288240 Msa0379870:intron 35.0%
ACCTAATACAACAAATGAGC+GGG + chr3_1:81288269-81288288 Msa0379870:intron 35.0%
CAAATGAGCGGGAAAATATT+AGG + chr3_1:81288280-81288299 Msa0379870:intron 35.0%
CATACCAATCTTGAAGGAAA+TGG + chr3_1:81288736-81288755 Msa0379870:intron 35.0%
! AATGCCATTTCCTTCAAGAT+TGG - chr3_1:81288743-81288762 None:intergenic 35.0%
TGTCAATATCAGATGAGAAG+GGG - chr3_1:81288937-81288956 None:intergenic 35.0%
CTGTCAATATCAGATGAGAA+GGG - chr3_1:81288938-81288957 None:intergenic 35.0%
TGATATTGACAGCTACTTGT+GGG + chr3_1:81288946-81288965 Msa0379870:intron 35.0%
! AGAAAGACATAAAGAGGCAT+CGG + chr3_1:81288979-81288998 Msa0379870:five_prime_UTR 35.0%
! TGCTGTTGAATTGAGTTGTA+TGG + chr3_1:81289270-81289289 Msa0379870:intron 35.0%
!! GTATGGTTCTGATGAACTAT+AGG + chr3_1:81289287-81289306 Msa0379870:intron 35.0%
CAAAAGTTCCTAGCATATGA+TGG - chr3_1:81289326-81289345 None:intergenic 35.0%
!!! GTTTTTTCAACAGCATGTGA+AGG - chr3_1:81289415-81289434 None:intergenic 35.0%
CTGTTGAAAAAACAAAGGCT+GGG + chr3_1:81289422-81289441 Msa0379870:five_prime_UTR 35.0%
GATATGCCGTACTTTATTGT+GGG + chr3_1:81289444-81289463 Msa0379870:five_prime_UTR 35.0%
CAGTAACCCACAATAAAGTA+CGG - chr3_1:81289453-81289472 None:intergenic 35.0%
! TCATATGAGTTTTCTTGCTG+TGG - chr3_1:81289558-81289577 None:intergenic 35.0%
CATTAGCCACTCATTGAATA+TGG - chr3_1:81289795-81289814 None:intergenic 35.0%
TTAAGTCAATCAGGCATCAA+GGG - chr3_1:81289823-81289842 None:intergenic 35.0%
ATTAAGTCAATCAGGCATCA+AGG - chr3_1:81289824-81289843 None:intergenic 35.0%
AAAACAACAAACCCACCAAA+TGG - chr3_1:81289850-81289869 None:intergenic 35.0%
GGCAATGAACTGAAAAAACT+GGG - chr3_1:81290081-81290100 None:intergenic 35.0%
AGGCAATGAACTGAAAAAAC+TGG - chr3_1:81290082-81290101 None:intergenic 35.0%
! AGTATTTTTCCAGCTCAATG+TGG + chr3_1:81290198-81290217 Msa0379870:intron 35.0%
! ATTGTCTGGATCATCGTTTT+TGG + chr3_1:81290441-81290460 Msa0379870:CDS 35.0%
! TCCTCAATCTTTTAACAACC+CGG + chr3_1:81290465-81290484 Msa0379870:CDS 35.0%
!! CTGCATGTGCATTTGTTTTT+CGG + chr3_1:81290628-81290647 Msa0379870:intron 35.0%
TCGTACTCAAAATAACATGC+TGG - chr3_1:81290675-81290694 None:intergenic 35.0%
! TATTTGATGGCATTACCTTG+AGG + chr3_1:81290776-81290795 Msa0379870:intron 35.0%
GTATGAGTTTCATAACTTGG+AGG - chr3_1:81290805-81290824 None:intergenic 35.0%
TAATAGGAAGACACAGATCT+TGG + chr3_1:81290877-81290896 Msa0379870:intron 35.0%
AATATCTTCTGTATCACCTG+AGG - chr3_1:81291061-81291080 None:intergenic 35.0%
TCAGGTGATACAGAAGATAT+TGG + chr3_1:81291060-81291079 Msa0379870:CDS 35.0%
CAGGTGATACAGAAGATATT+GGG + chr3_1:81291061-81291080 Msa0379870:CDS 35.0%
AGGTGATACAGAAGATATTG+GGG + chr3_1:81291062-81291081 Msa0379870:CDS 35.0%
!! ATAGATATTTCTGGTTCTGC+TGG + chr3_1:81291186-81291205 Msa0379870:CDS 35.0%
TTTCTCAAGACTCCATTATG+AGG + chr3_1:81291241-81291260 Msa0379870:CDS 35.0%
GTAACCATCAAACCTCATAA+TGG - chr3_1:81291256-81291275 None:intergenic 35.0%
! ATGAGGTTTGATGGTTACAA+TGG + chr3_1:81291258-81291277 Msa0379870:CDS 35.0%
AGGAAACTACCACATTAACA+TGG + chr3_1:81291301-81291320 Msa0379870:CDS 35.0%
AACTTGATGCCATGTTAATG+TGG - chr3_1:81291313-81291332 None:intergenic 35.0%
GATGGTCAGATAGATATTTC+TGG + chr3_1:81291366-81291385 Msa0379870:CDS 35.0%
!! ATAGATATTTCTGGTTCTGC+TGG + chr3_1:81291186-81291205 Msa0379870:CDS 35.0%
TCTCAAGAACCTAATTGTGA+TGG + chr3_1:81291432-81291451 Msa0379870:CDS 35.0%
TTCTGGTAACCATCACAATT+AGG - chr3_1:81291444-81291463 None:intergenic 35.0%
AATTGTGATGGTTACCAGAA+TGG + chr3_1:81291444-81291463 Msa0379870:CDS 35.0%
ACTTGATGCAATGTTACTGT+GGG - chr3_1:81291498-81291517 None:intergenic 35.0%
AACTTGATGCAATGTTACTG+TGG - chr3_1:81291499-81291518 None:intergenic 35.0%
! TGGTAAGATGATTGATGGTA+CGG + chr3_1:81291554-81291573 Msa0379870:CDS 35.0%
CAAAACCCTATTTATCGGTG+AGG + chr3_1:81279727-81279746 Msa0379870:five_prime_UTR 40.0%
CATCTTCCTCACCGATAAAT+AGG - chr3_1:81279736-81279755 None:intergenic 40.0%
TCTCGAAGTCTTCGATTTCA+AGG + chr3_1:81279776-81279795 Msa0379870:five_prime_UTR 40.0%
CTACGAAATGATCTTACCGT+GGG - chr3_1:81279874-81279893 None:intergenic 40.0%
TCTACGAAATGATCTTACCG+TGG - chr3_1:81279875-81279894 None:intergenic 40.0%
TGAAACCTGCAGAATGCATT+AGG + chr3_1:81280064-81280083 Msa0379870:intron 40.0%
! AAGAACGGTGTTAGACTCAA+TGG + chr3_1:81280128-81280147 Msa0379870:intron 40.0%
ATTTGTTTACCCTAAGGGCT+TGG + chr3_1:81280319-81280338 Msa0379870:intron 40.0%
GTCAAGTAGATGGATGATGA+AGG + chr3_1:81280459-81280478 Msa0379870:intron 40.0%
CCATAATGCAATTACATGCC+TGG - chr3_1:81280565-81280584 None:intergenic 40.0%
CCAGGCATGTAATTGCATTA+TGG + chr3_1:81280562-81280581 Msa0379870:intron 40.0%
GAAATAGTTGTCGTTAGTGG+CGG + chr3_1:81280984-81281003 Msa0379870:intron 40.0%
!! TAATGTACCTGTTGGTTTGG+TGG + chr3_1:81281079-81281098 Msa0379870:intron 40.0%
! TTTTGCAAAGCCCAATACTG+GGG + chr3_1:81281115-81281134 Msa0379870:intron 40.0%
AAGATTCGAACCCCAGTATT+GGG - chr3_1:81281128-81281147 None:intergenic 40.0%
AAAGATTCGAACCCCAGTAT+TGG - chr3_1:81281129-81281148 None:intergenic 40.0%
! AGGCTGAACATTTTACCAGT+GGG + chr3_1:81281213-81281232 Msa0379870:intron 40.0%
!!! TTTTTTGGCATCCTGTTTCC+CGG - chr3_1:81281241-81281260 None:intergenic 40.0%
AACAGAATACACACACACTC+AGG + chr3_1:81281264-81281283 Msa0379870:intron 40.0%
ACAGAATACACACACACTCA+GGG + chr3_1:81281265-81281284 Msa0379870:intron 40.0%
ACCATTGTTATGAGGTTGTC+CGG - chr3_1:81281412-81281431 None:intergenic 40.0%
AATTGACCTAATTTCTCCCG+TGG + chr3_1:81281454-81281473 Msa0379870:intron 40.0%
GATAATCCACGGGAGAAATT+AGG - chr3_1:81281463-81281482 None:intergenic 40.0%
! GCTGGTCTATATGTTGTGAT+TGG - chr3_1:81281555-81281574 None:intergenic 40.0%
ACATCAACACAGGGAATAGT+GGG - chr3_1:81282170-81282189 None:intergenic 40.0%
TCTTCCATTGTTTCGAACGA+GGG - chr3_1:81282233-81282252 None:intergenic 40.0%
ATCTTCCATTGTTTCGAACG+AGG - chr3_1:81282234-81282253 None:intergenic 40.0%
ACAGTGATTCTCCTGACTAA+TGG - chr3_1:81282312-81282331 None:intergenic 40.0%
TTGTATCCCTATTCTCTGGT+CGG - chr3_1:81282364-81282383 None:intergenic 40.0%
CTAGTTGTATCCCTATTCTC+TGG - chr3_1:81282368-81282387 None:intergenic 40.0%
GAGAATAGGGATACAACTAG+TGG + chr3_1:81282368-81282387 Msa0379870:five_prime_UTR 40.0%
GCTTCTGATATTGCAGAGAA+CGG + chr3_1:81282600-81282619 Msa0379870:five_prime_UTR 40.0%
TCAGTTTCACTGAATGGTTG+TGG + chr3_1:81282728-81282747 Msa0379870:intron 40.0%
TTCACTGAATGGTTGTGGAT+TGG + chr3_1:81282733-81282752 Msa0379870:five_prime_UTR 40.0%
TGCAAATTTGGATAGCCTCA+AGG - chr3_1:81282868-81282887 None:intergenic 40.0%
TAGAGAGAACGTTGAAAGGA+GGG - chr3_1:81283074-81283093 None:intergenic 40.0%
TTAGAGAGAACGTTGAAAGG+AGG - chr3_1:81283075-81283094 None:intergenic 40.0%
TCTCCTTTCATGCAATCTTC+AGG + chr3_1:81283678-81283697 Msa0379870:intron 40.0%
CATCCTGAAGATTGCATGAA+AGG - chr3_1:81283684-81283703 None:intergenic 40.0%
GCCCCGTGTAATAATTATCT+TGG - chr3_1:81283750-81283769 None:intergenic 40.0%
CTTGATGCAACTATGTGAGA+AGG - chr3_1:81283782-81283801 None:intergenic 40.0%
GTACTTTCTTCAGAGTGGAA+CGG + chr3_1:81283965-81283984 Msa0379870:intron 40.0%
! GGTATACAACTGTAGGCTTT+TGG + chr3_1:81284421-81284440 Msa0379870:intron 40.0%
!! GCTTCTGAGATATTTGGCTT+AGG + chr3_1:81284932-81284951 Msa0379870:intron 40.0%
CATGTGAGGTAGAAAGGAAT+AGG - chr3_1:81285174-81285193 None:intergenic 40.0%
CAAGTACATGTGAGGTAGAA+AGG - chr3_1:81285180-81285199 None:intergenic 40.0%
! TCTTATTCTGTGTGGTTTGG+GGG + chr3_1:81285206-81285225 Msa0379870:intron 40.0%
! GTGTCATTAACGAATGTGTC+TGG - chr3_1:81285372-81285391 None:intergenic 40.0%
ACAAGCACAAGCTAACTTAC+TGG - chr3_1:81285413-81285432 None:intergenic 40.0%
TTGTTCTCTCAACATGCACA+TGG - chr3_1:81285608-81285627 None:intergenic 40.0%
GAAGAATCAGATACAAGAGG+AGG + chr3_1:81285764-81285783 Msa0379870:five_prime_UTR 40.0%
GAATCGTACTTGAAGTTCAC+AGG - chr3_1:81285948-81285967 None:intergenic 40.0%
! AAAAGCAATACGGTTTTCGG+GGG - chr3_1:81286318-81286337 None:intergenic 40.0%
AGTGTCCACATTCACTGTAT+AGG + chr3_1:81286367-81286386 Msa0379870:intron 40.0%
TTTGGCCTATACAGTGAATG+TGG - chr3_1:81286375-81286394 None:intergenic 40.0%
AAAACAGAGTATAGGTCTGG+CGG - chr3_1:81286590-81286609 None:intergenic 40.0%
TATAAGCATGTGTGAGTGTG+GGG - chr3_1:81286798-81286817 None:intergenic 40.0%
GTATAAGCATGTGTGAGTGT+GGG - chr3_1:81286799-81286818 None:intergenic 40.0%
AGTATAAGCATGTGTGAGTG+TGG - chr3_1:81286800-81286819 None:intergenic 40.0%
TGTAGTTTCTGTGCCTACTT+AGG + chr3_1:81286819-81286838 Msa0379870:intron 40.0%
!! TGCCTACTTAGGTTTTTGAG+AGG + chr3_1:81286830-81286849 Msa0379870:intron 40.0%
!! GCCTACTTAGGTTTTTGAGA+GGG + chr3_1:81286831-81286850 Msa0379870:intron 40.0%
!! CCTACTTAGGTTTTTGAGAG+GGG + chr3_1:81286832-81286851 Msa0379870:intron 40.0%
GTGTTTGTGTACGACAAAAG+TGG - chr3_1:81286933-81286952 None:intergenic 40.0%
ACACAAACACAATGACATCG+AGG + chr3_1:81286943-81286962 Msa0379870:intron 40.0%
!! ATGAGACACTTGTTGTGAGA+CGG - chr3_1:81287070-81287089 None:intergenic 40.0%
AGTTAAGGAGCAGAGTGATA+AGG - chr3_1:81287193-81287212 None:intergenic 40.0%
! TAATGATAGCTTGGTGGCTA+GGG - chr3_1:81287222-81287241 None:intergenic 40.0%
! ATAATGATAGCTTGGTGGCT+AGG - chr3_1:81287223-81287242 None:intergenic 40.0%
GCCTTTAGGCATTAGTTAAG+AGG - chr3_1:81287456-81287475 None:intergenic 40.0%
! AATGCTAACTTGTGCCCTTA+AGG + chr3_1:81287506-81287525 Msa0379870:intron 40.0%
TCCGCACAGGTTTATTGTAA+AGG + chr3_1:81288082-81288101 Msa0379870:intron 40.0%
CCCTTTACAATAAACCTGTG+CGG - chr3_1:81288086-81288105 None:intergenic 40.0%
CCGCACAGGTTTATTGTAAA+GGG + chr3_1:81288083-81288102 Msa0379870:intron 40.0%
!! TCCCGCTCATTTGTTGTATT+AGG - chr3_1:81288273-81288292 None:intergenic 40.0%
GCTGTCAATATCAGATGAGA+AGG - chr3_1:81288939-81288958 None:intergenic 40.0%
CTGATATTGACAGCTACTTG+TGG + chr3_1:81288945-81288964 Msa0379870:intron 40.0%
TATAGCAGACAATACCGCAA+GGG - chr3_1:81289047-81289066 None:intergenic 40.0%
ATATAGCAGACAATACCGCA+AGG - chr3_1:81289048-81289067 None:intergenic 40.0%
CAGGGAACTACTTGAAAAAG+CGG + chr3_1:81289187-81289206 Msa0379870:intron 40.0%
GACTCAATCCATCATATGCT+AGG + chr3_1:81289315-81289334 Msa0379870:five_prime_UTR 40.0%
TTTCAACAGCATGTGAAGGA+TGG - chr3_1:81289411-81289430 None:intergenic 40.0%
GCTGTTGAAAAAACAAAGGC+TGG + chr3_1:81289421-81289440 Msa0379870:five_prime_UTR 40.0%
GGATATGCCGTACTTTATTG+TGG + chr3_1:81289443-81289462 Msa0379870:five_prime_UTR 40.0%
ATAAGCATGATCAACAGCTC+AGG - chr3_1:81289941-81289960 None:intergenic 40.0%
CACAAGGAACTCCACAAATT+GGG - chr3_1:81289974-81289993 None:intergenic 40.0%
ACACAAGGAACTCCACAAAT+TGG - chr3_1:81289975-81289994 None:intergenic 40.0%
TGGGAGATGCAATATTCGAT+AGG - chr3_1:81290062-81290081 None:intergenic 40.0%
ATGAGATTTCACGTGAACCA+TGG - chr3_1:81290297-81290316 None:intergenic 40.0%
TTGAGCATCTTGAGTTCAAC+AGG + chr3_1:81290374-81290393 Msa0379870:five_prime_UTR 40.0%
TGAGCATCTTGAGTTCAACA+GGG + chr3_1:81290375-81290394 Msa0379870:five_prime_UTR 40.0%
! CCTCAATCTTTTAACAACCC+GGG + chr3_1:81290466-81290485 Msa0379870:CDS 40.0%
TACTACAGCAGGAACAACAT+CGG + chr3_1:81290519-81290538 Msa0379870:CDS 40.0%
ATGATCGCTGGTCAAAAGAT+TGG - chr3_1:81290552-81290571 None:intergenic 40.0%
AAGCCTCTCATTTGGTACAA+GGG - chr3_1:81290723-81290742 None:intergenic 40.0%
TGAGTTTCATAACTTGGAGG+TGG - chr3_1:81290802-81290821 None:intergenic 40.0%
!! TTGTTGGAAGTTGGTATCTG+TGG - chr3_1:81290923-81290942 None:intergenic 40.0%
AGATACCAACTTCCAACAAG+TGG + chr3_1:81290924-81290943 Msa0379870:CDS 40.0%
AGGTAAGGCAAAGAACATTG+AGG - chr3_1:81290961-81290980 None:intergenic 40.0%
TTCTTTGCCTTACCTTCCAA+GGG + chr3_1:81290966-81290985 Msa0379870:CDS 40.0%
TTCCAAGGGATTGTGGAAAT+GGG + chr3_1:81290980-81290999 Msa0379870:CDS 40.0%
CTGAATACTGCCATGAAGAT+TGG + chr3_1:81291088-81291107 Msa0379870:CDS 40.0%
! CAACAATTTTCCAACACCCT+CGG + chr3_1:81291209-81291228 Msa0379870:CDS 40.0%
GACTCCATTATGAGGTTTGA+TGG + chr3_1:81291249-81291268 Msa0379870:CDS 40.0%
AATGTGGTAGTTTCCTGACA+GGG - chr3_1:81291297-81291316 None:intergenic 40.0%
TAATGTGGTAGTTTCCTGAC+AGG - chr3_1:81291298-81291317 None:intergenic 40.0%
GAGAGTGAATATCTCCATTC+TGG - chr3_1:81291461-81291480 None:intergenic 40.0%
GACGATGGTAAGATGATTGA+TGG + chr3_1:81291549-81291568 Msa0379870:CDS 40.0%
! TACGGAACCTGATATTTCTG+AGG + chr3_1:81291572-81291591 Msa0379870:CDS 40.0%
GCTTGTTCCTCAGAAATATC+AGG - chr3_1:81291582-81291601 None:intergenic 40.0%
CGCTGTAAGAGACGCTATTT+GGG - chr3_1:81279655-81279674 None:intergenic 45.0%
ACGCTGTAAGAGACGCTATT+TGG - chr3_1:81279656-81279675 None:intergenic 45.0%
AAGACTTCGAGATCTCTACG+TGG - chr3_1:81279768-81279787 None:intergenic 45.0%
ATGATCTTACCGTGGGTGAA+GGG - chr3_1:81279867-81279886 None:intergenic 45.0%
AATGATCTTACCGTGGGTGA+AGG - chr3_1:81279868-81279887 None:intergenic 45.0%
AACCTGCAGAATGCATTAGG+AGG + chr3_1:81280067-81280086 Msa0379870:intron 45.0%
ACTGGGGTTCGAATCTTTGT+AGG + chr3_1:81281131-81281150 Msa0379870:intron 45.0%
! TATAGGAGTCGCAAGCCTTT+TGG + chr3_1:81281190-81281209 Msa0379870:intron 45.0%
! GAGGCTGAACATTTTACCAG+TGG + chr3_1:81281212-81281231 Msa0379870:intron 45.0%
! GGCTGAACATTTTACCAGTG+GGG + chr3_1:81281214-81281233 Msa0379870:intron 45.0%
!! TTTTTGGCATCCTGTTTCCC+GGG - chr3_1:81281240-81281259 None:intergenic 45.0%
ACCGGACAACCTCATAACAA+TGG + chr3_1:81281408-81281427 Msa0379870:intron 45.0%
CATCAGCAAACTGTTCTCAC+TGG + chr3_1:81281843-81281862 Msa0379870:intron 45.0%
ATACATGTGACGACAACCAG+TGG - chr3_1:81281948-81281967 None:intergenic 45.0%
CATCAACACAGGGAATAGTG+GGG - chr3_1:81282169-81282188 None:intergenic 45.0%
CACATCAACACAGGGAATAG+TGG - chr3_1:81282171-81282190 None:intergenic 45.0%
! CACTATTCCCTGTGTTGATG+TGG + chr3_1:81282169-81282188 Msa0379870:five_prime_UTR 45.0%
! ATTCCCTGTGTTGATGTGGT+TGG + chr3_1:81282173-81282192 Msa0379870:five_prime_UTR 45.0%
AAACCCCTCGTTCGAAACAA+TGG + chr3_1:81282226-81282245 Msa0379870:five_prime_UTR 45.0%
CTTCCATTGTTTCGAACGAG+GGG - chr3_1:81282232-81282251 None:intergenic 45.0%
ACTATGACCGACCAGAGAAT+AGG + chr3_1:81282354-81282373 Msa0379870:five_prime_UTR 45.0%
CTATGACCGACCAGAGAATA+GGG + chr3_1:81282355-81282374 Msa0379870:five_prime_UTR 45.0%
!! CTGAATGGTTGTGGATTGGA+TGG + chr3_1:81282737-81282756 Msa0379870:five_prime_UTR 45.0%
ATGGGTCTCACCACTTTATG+TGG + chr3_1:81283123-81283142 Msa0379870:intron 45.0%
TGGGTCTCACCACTTTATGT+GGG + chr3_1:81283124-81283143 Msa0379870:intron 45.0%
GAAATGGGTCCCACATAAAG+TGG - chr3_1:81283136-81283155 None:intergenic 45.0%
ACGAGGCCTTTGATCTTGAA+TGG + chr3_1:81283830-81283849 Msa0379870:five_prime_UTR 45.0%
CGAGGCCTTTGATCTTGAAT+GGG + chr3_1:81283831-81283850 Msa0379870:five_prime_UTR 45.0%
GAGGCCTTTGATCTTGAATG+GGG + chr3_1:81283832-81283851 Msa0379870:five_prime_UTR 45.0%
GACGTGTACTTTCTTCAGAG+TGG + chr3_1:81283960-81283979 Msa0379870:intron 45.0%
GCAAATCAGGTAGATCATGC+AGG + chr3_1:81284020-81284039 Msa0379870:five_prime_UTR 45.0%
GTTGATGTCGTTGATCGACA+TGG + chr3_1:81284063-81284082 Msa0379870:intron 45.0%
!! CCAAGTCTTGTTAAGACTCG+TGG - chr3_1:81284487-81284506 None:intergenic 45.0%
CCACGAGTCTTAACAAGACT+TGG + chr3_1:81284484-81284503 Msa0379870:intron 45.0%
GATGACGAAACTAAATCGGG+TGG + chr3_1:81284699-81284718 Msa0379870:five_prime_UTR 45.0%
AGATAAAGGAAGCTCCATGG+TGG - chr3_1:81285471-81285490 None:intergenic 45.0%
GGCTCTTATCTACAGAGAAC+AGG + chr3_1:81285574-81285593 Msa0379870:intron 45.0%
CTTTCGAAAGCTGGCTGATT+TGG + chr3_1:81285821-81285840 Msa0379870:five_prime_UTR 45.0%
CATATGTCATCCTGGTGAAG+TGG + chr3_1:81286056-81286075 Msa0379870:five_prime_UTR 45.0%
GTCTGAAAAACCTGCTCCAA+TGG + chr3_1:81286241-81286260 Msa0379870:five_prime_UTR 45.0%
!! AAAGCAATACGGTTTTCGGG+GGG - chr3_1:81286317-81286336 None:intergenic 45.0%
ACCAGACTGCATTAGGGATT+GGG - chr3_1:81286737-81286756 None:intergenic 45.0%
ATAAGCATGTGTGAGTGTGG+GGG - chr3_1:81286797-81286816 None:intergenic 45.0%
CCCCTCTCAAAAACCTAAGT+AGG - chr3_1:81286835-81286854 None:intergenic 45.0%
CTTCTGCTTCAAATTGAGGG+TGG - chr3_1:81287012-81287031 None:intergenic 45.0%
CAGAGTGATAAGGAGGTCAA+GGG - chr3_1:81287183-81287202 None:intergenic 45.0%
TAAGGAGCAGAGTGATAAGG+AGG - chr3_1:81287190-81287209 None:intergenic 45.0%
TGACACTAATTGTTGGACGG+AGG + chr3_1:81287991-81288010 Msa0379870:intron 45.0%
GACACTAATTGTTGGACGGA+GGG + chr3_1:81287992-81288011 Msa0379870:intron 45.0%
ACACTAATTGTTGGACGGAG+GGG + chr3_1:81287993-81288012 Msa0379870:intron 45.0%
ACAGCTACTTGTGGGAAGAA+TGG + chr3_1:81288954-81288973 Msa0379870:intron 45.0%
ATAGCAGACAATACCGCAAG+GGG - chr3_1:81289046-81289065 None:intergenic 45.0%
ACTGTCATGGAGTAAGCACT+AGG - chr3_1:81289533-81289552 None:intergenic 45.0%
! TTTTCCAGCTCAATGTGGAC+TGG + chr3_1:81290203-81290222 Msa0379870:intron 45.0%
TCTGAACTCGTGGAAAACCA+TGG + chr3_1:81290277-81290296 Msa0379870:five_prime_UTR 45.0%
CGTGAAATCTCATCCTCTGA+TGG + chr3_1:81290304-81290323 Msa0379870:five_prime_UTR 45.0%
GTGATCATCACTACCATCAG+AGG - chr3_1:81290320-81290339 None:intergenic 45.0%
CCCGGGTTGTTAAAAGATTG+AGG - chr3_1:81290469-81290488 None:intergenic 45.0%
! ATCTTTTAACAACCCGGGCA+TGG + chr3_1:81290471-81290490 Msa0379870:CDS 45.0%
!! CTCAAGGATCTTTTTGAGCC+AGG + chr3_1:81290496-81290515 Msa0379870:CDS 45.0%
AGCGATAATCAGATGATCGC+TGG - chr3_1:81290564-81290583 None:intergenic 45.0%
AAGGGCTCAAGATTGAGATG+AGG - chr3_1:81290705-81290724 None:intergenic 45.0%
GAAGCCTCTCATTTGGTACA+AGG - chr3_1:81290724-81290743 None:intergenic 45.0%
CACTACAGAAGCCTCTCATT+TGG - chr3_1:81290731-81290750 None:intergenic 45.0%
GTTCTTTGCCTTACCTTCCA+AGG + chr3_1:81290965-81290984 Msa0379870:CDS 45.0%
CATTTCCACAATCCCTTGGA+AGG - chr3_1:81290981-81291000 None:intergenic 45.0%
CTTCCAAGGGATTGTGGAAA+TGG + chr3_1:81290979-81290998 Msa0379870:CDS 45.0%
ACCAGAAATCTCTCTGCAAG+AGG + chr3_1:81291014-81291033 Msa0379870:CDS 45.0%
TGGGCTCATTCCAATCTTCA+TGG - chr3_1:81291101-81291120 None:intergenic 45.0%
TCTGCCTCACAAGATGCTAT+GGG - chr3_1:81291120-81291139 None:intergenic 45.0%
TTCTGCCTCACAAGATGCTA+TGG - chr3_1:81291121-81291140 None:intergenic 45.0%
TGAGAAATTCCCACAACCGA+GGG - chr3_1:81291228-81291247 None:intergenic 45.0%
TTGAGAAATTCCCACAACCG+AGG - chr3_1:81291229-81291248 None:intergenic 45.0%
TGATATTCACTCTCCCTGTC+AGG + chr3_1:81291281-81291300 Msa0379870:CDS 45.0%
ATCTATCTGACCATCGCAAG+CGG - chr3_1:81291361-81291380 None:intergenic 45.0%
TTGAGAAATTCCCACGACTG+AGG - chr3_1:81291418-81291437 None:intergenic 45.0%
AGATATTCACTCTCCCTGTC+TGG + chr3_1:81291467-81291486 Msa0379870:CDS 45.0%
AGTTTCTGATGCAGTAGACG+AGG + chr3_1:81291515-81291534 Msa0379870:CDS 45.0%
TCTTCGCTTCTACCTTCTAG+AGG - chr3_1:81291627-81291646 None:intergenic 45.0%
!! AATAAAATAGTTATATATAA+TGG - chr3_1:81282910-81282929 None:intergenic 5.0%
!!! TAACTTAAAATTTTTAAAAT+TGG + chr3_1:81286976-81286995 Msa0379870:intron 5.0%
!!! AATTTTAATATTGATTTTTA+CGG + chr3_1:81290145-81290164 Msa0379870:intron 5.0%
ATTCCGTACTCGTTCGGACT+CGG - chr3_1:81279705-81279724 None:intergenic 50.0%
AATCTCGATCCCTTCACCCA+CGG + chr3_1:81279855-81279874 Msa0379870:five_prime_UTR 50.0%
TGCCTCCTAATGCATTCTGC+AGG - chr3_1:81280072-81280091 None:intergenic 50.0%
TGCAGAATGCATTAGGAGGC+AGG + chr3_1:81280071-81280090 Msa0379870:intron 50.0%
TTACCCTAAGGGCTTGGAAC+CGG + chr3_1:81280325-81280344 Msa0379870:intron 50.0%
GTTATCACAAGTTCCCGTCC+CGG - chr3_1:81280347-81280366 None:intergenic 50.0%
GTACGAAACAGCTGAAGACC+AGG + chr3_1:81280544-81280563 Msa0379870:intron 50.0%
TTTGGCAACTCACCAGCTTC+AGG + chr3_1:81280842-81280861 Msa0379870:five_prime_UTR 50.0%
! GTTTGACTTCCACCTGAAGC+TGG - chr3_1:81280857-81280876 None:intergenic 50.0%
! TGAAAGTGTGCAGCGTGCTT+TGG + chr3_1:81280918-81280937 Msa0379870:intron 50.0%
!!! GCAGCGTGCTTTGGTTTTGT+CGG + chr3_1:81280927-81280946 Msa0379870:intron 50.0%
! AACATTTTACCAGTGGGGCC+CGG + chr3_1:81281219-81281238 Msa0379870:intron 50.0%
ACACACTCAGGGTGTGACTT+CGG + chr3_1:81281276-81281295 Msa0379870:intron 50.0%
! GTTCCCTAGTCTTCTCTCAC+CGG + chr3_1:81281390-81281409 Msa0379870:intron 50.0%
TGTCCGGTGAGAGAAGACTA+GGG - chr3_1:81281396-81281415 None:intergenic 50.0%
TTGTCCGGTGAGAGAAGACT+AGG - chr3_1:81281397-81281416 None:intergenic 50.0%
ACAGGGGGATGATAATCCAC+GGG - chr3_1:81281473-81281492 None:intergenic 50.0%
CACAGGGGGATGATAATCCA+CGG - chr3_1:81281474-81281493 None:intergenic 50.0%
TTGTACGGTGAGAGAAGACC+AGG + chr3_1:81281744-81281763 Msa0379870:intron 50.0%
TGTACGGTGAGAGAAGACCA+GGG + chr3_1:81281745-81281764 Msa0379870:intron 50.0%
! TGGCGGATCTTTGTTGTGAC+GGG - chr3_1:81281928-81281947 None:intergenic 50.0%
!! GTGGCGGATCTTTGTTGTGA+CGG - chr3_1:81281929-81281948 None:intergenic 50.0%
TCACAACAAAGATCCGCCAC+TGG + chr3_1:81281929-81281948 Msa0379870:intron 50.0%
TCCAGATGCCCAGATCAACT+CGG + chr3_1:81282127-81282146 Msa0379870:intron 50.0%
!! GACACCAACCGAGTTGATCT+GGG - chr3_1:81282138-81282157 None:intergenic 50.0%
!! TGACACCAACCGAGTTGATC+TGG - chr3_1:81282139-81282158 None:intergenic 50.0%
CTGCCAACCACATCAACACA+GGG - chr3_1:81282179-81282198 None:intergenic 50.0%
ACTGCCAACCACATCAACAC+AGG - chr3_1:81282180-81282199 None:intergenic 50.0%
ACGAGCCAGATTGATCCTTC+AGG + chr3_1:81282407-81282426 Msa0379870:five_prime_UTR 50.0%
CGAGCCAGATTGATCCTTCA+GGG + chr3_1:81282408-81282427 Msa0379870:five_prime_UTR 50.0%
GAGACCCTGAAGGATCAATC+TGG - chr3_1:81282415-81282434 None:intergenic 50.0%
GGGGACTGCACATAGGAAAT+GGG - chr3_1:81283151-81283170 None:intergenic 50.0%
TGGGGACTGCACATAGGAAA+TGG - chr3_1:81283152-81283171 None:intergenic 50.0%
TCATTGTGGGGACTGCACAT+AGG - chr3_1:81283158-81283177 None:intergenic 50.0%
ATCCTCACAAGAGAGAGCGA+GGG - chr3_1:81283300-81283319 None:intergenic 50.0%
AATCCTCACAAGAGAGAGCG+AGG - chr3_1:81283301-81283320 None:intergenic 50.0%
TCGCTCTCTCTTGTGAGGAT+TGG + chr3_1:81283300-81283319 Msa0379870:intron 50.0%
AACTGCATGTATGGAGCACG+AGG + chr3_1:81283813-81283832 Msa0379870:five_prime_UTR 50.0%
GATCATGCAGGCGAAACTTC+AGG + chr3_1:81284032-81284051 Msa0379870:five_prime_UTR 50.0%
TGTCGTTGATCGACATGGAG+TGG + chr3_1:81284068-81284087 Msa0379870:intron 50.0%
ACAGCATCAGCATCCCCTTT+AGG - chr3_1:81285315-81285334 None:intergenic 50.0%
AGAGTTGGACAACGCGCTTA+AGG + chr3_1:81286173-81286192 Msa0379870:five_prime_UTR 50.0%
GGTGCCCTGCATATTGCATA+TGG + chr3_1:81286194-81286213 Msa0379870:five_prime_UTR 50.0%
ATTCCCTTGTGTTGAGGTCG+TGG + chr3_1:81286554-81286573 Msa0379870:intron 50.0%
GTTCCACGACCTCAACACAA+GGG - chr3_1:81286560-81286579 None:intergenic 50.0%
AGTTCCACGACCTCAACACA+AGG - chr3_1:81286561-81286580 None:intergenic 50.0%
CCAGACTGCATTAGGGATTG+GGG - chr3_1:81286736-81286755 None:intergenic 50.0%
GACCAGACTGCATTAGGGAT+TGG - chr3_1:81286738-81286757 None:intergenic 50.0%
GACCAAACTGCATATCCGAG+CGG - chr3_1:81286760-81286779 None:intergenic 50.0%
TAAGCATGTGTGAGTGTGGG+GGG - chr3_1:81286796-81286815 None:intergenic 50.0%
!! GACACTTGTTGTGAGACGGA+GGG - chr3_1:81287066-81287085 None:intergenic 50.0%
!! AGACACTTGTTGTGAGACGG+AGG - chr3_1:81287067-81287086 None:intergenic 50.0%
GCAGAGTGATAAGGAGGTCA+AGG - chr3_1:81287184-81287203 None:intergenic 50.0%
CACTAATTGTTGGACGGAGG+GGG + chr3_1:81287994-81288013 Msa0379870:intron 50.0%
AATAAACCTGTGCGGAGCAC+GGG - chr3_1:81288078-81288097 None:intergenic 50.0%
CAATAAACCTGTGCGGAGCA+CGG - chr3_1:81288079-81288098 None:intergenic 50.0%
! TTTGCGTTTTCTCCCCCTTG+CGG + chr3_1:81289030-81289049 Msa0379870:five_prime_UTR 50.0%
TAGCAGACAATACCGCAAGG+GGG - chr3_1:81289045-81289064 None:intergenic 50.0%
! TCTTGCTGTGGCAACTGTCA+TGG - chr3_1:81289546-81289565 None:intergenic 50.0%
CTAGGTAGTGCAGCAGAAAG+AGG - chr3_1:81289587-81289606 None:intergenic 50.0%
CTTCAGCAAGGAAGAGCTCT+AGG - chr3_1:81289605-81289624 None:intergenic 50.0%
GAAACCAGTCCACATTGAGC+TGG - chr3_1:81290210-81290229 None:intergenic 50.0%
CGCTTGAGATAAGCTTCAGC+AGG - chr3_1:81290235-81290254 None:intergenic 50.0%
TCAAGCGAACACTGATCCAG+AGG + chr3_1:81290248-81290267 Msa0379870:five_prime_UTR 50.0%
CGAGTTCAGATATCAGCCTC+TGG - chr3_1:81290267-81290286 None:intergenic 50.0%
GAGGCTGATATCTGAACTCG+TGG + chr3_1:81290267-81290286 Msa0379870:five_prime_UTR 50.0%
CGTCAAAACCTTCCCATGCT+GGG + chr3_1:81290398-81290417 Msa0379870:five_prime_UTR 50.0%
GTCAAAACCTTCCCATGCTG+GGG + chr3_1:81290399-81290418 Msa0379870:five_prime_UTR 50.0%
TTCTATTCCCTCCCCAGCAT+GGG - chr3_1:81290413-81290432 None:intergenic 50.0%
TTTCTATTCCCTCCCCAGCA+TGG - chr3_1:81290414-81290433 None:intergenic 50.0%
AGATCCTTGAGAACCATGCC+CGG - chr3_1:81290487-81290506 None:intergenic 50.0%
TTTGAGCCAGGTACTACAGC+AGG + chr3_1:81290508-81290527 Msa0379870:CDS 50.0%
GTTGTTCCTGCTGTAGTACC+TGG - chr3_1:81290517-81290536 None:intergenic 50.0%
GAGCCCTTGTACCAAATGAG+AGG + chr3_1:81290717-81290736 Msa0379870:intron 50.0%
ATAACTTGGAGGTGGCCTCA+AGG - chr3_1:81290794-81290813 None:intergenic 50.0%
ACCAACTTCCAACAAGTGGC+TGG + chr3_1:81290928-81290947 Msa0379870:CDS 50.0%
! TCCAGCCACTTGTTGGAAGT+TGG - chr3_1:81290932-81290951 None:intergenic 50.0%
GTGTAACTCCAGCCACTTGT+TGG - chr3_1:81290939-81290958 None:intergenic 50.0%
CCACAATCCCTTGGAAGGTA+AGG - chr3_1:81290976-81290995 None:intergenic 50.0%
CCTTACCTTCCAAGGGATTG+TGG + chr3_1:81290973-81290992 Msa0379870:CDS 50.0%
GTCCCATTTCCACAATCCCT+TGG - chr3_1:81290985-81291004 None:intergenic 50.0%
GCCTCTTGCAGAGAGATTTC+TGG - chr3_1:81291018-81291037 None:intergenic 50.0%
TCATCACCAAGTAGTGCCTC+AGG + chr3_1:81291042-81291061 Msa0379870:CDS 50.0%
! GTATCACCTGAGGCACTACT+TGG - chr3_1:81291051-81291070 None:intergenic 50.0%
TGAGCCCATAGCATCTTGTG+AGG + chr3_1:81291113-81291132 Msa0379870:CDS 50.0%
! TTTTCCAACACCCTCGGTTG+TGG + chr3_1:81291215-81291234 Msa0379870:CDS 50.0%
TTTCCAACACCCTCGGTTGT+GGG + chr3_1:81291216-81291235 Msa0379870:CDS 50.0%
TTTGCCAACATCCTCAGTCG+TGG + chr3_1:81291404-81291423 Msa0379870:CDS 50.0%
TTGCCAACATCCTCAGTCGT+GGG + chr3_1:81291405-81291424 Msa0379870:CDS 50.0%
ATTCCCACGACTGAGGATGT+TGG - chr3_1:81291411-81291430 None:intergenic 50.0%
ACTGTGGGAGTTTCCAGACA+GGG - chr3_1:81291483-81291502 None:intergenic 50.0%
TACTGTGGGAGTTTCCAGAC+AGG - chr3_1:81291484-81291503 None:intergenic 50.0%
TTCTGATGCAGTAGACGAGG+AGG + chr3_1:81291518-81291537 Msa0379870:CDS 50.0%
CTGAGGAACAAGCTGCGAAA+CGG + chr3_1:81291589-81291608 Msa0379870:CDS 50.0%
AGGCGAGTTATGCCTCTAGA+AGG + chr3_1:81291612-81291631 Msa0379870:CDS 50.0%
TCACCGAGTCCGAACGAGTA+CGG + chr3_1:81279699-81279718 Msa0379870:five_prime_UTR 55.0%
TACCCTAAGGGCTTGGAACC+GGG + chr3_1:81280326-81280345 Msa0379870:intron 55.0%
! AGGAGTCGCAAGCCTTTTGG+AGG + chr3_1:81281193-81281212 Msa0379870:intron 55.0%
! ACATTTTACCAGTGGGGCCC+GGG + chr3_1:81281220-81281239 Msa0379870:intron 55.0%
! GGCGGATCTTTGTTGTGACG+GGG - chr3_1:81281927-81281946 None:intergenic 55.0%
CATGTGACGACAACCAGTGG+CGG - chr3_1:81281945-81281964 None:intergenic 55.0%
!! ACCGAGTTGATCTGGGCATC+TGG - chr3_1:81282131-81282150 None:intergenic 55.0%
GATGCCCAGATCAACTCGGT+TGG + chr3_1:81282131-81282150 Msa0379870:intron 55.0%
! GGATCAATCTGGCTCGTCTC+AGG - chr3_1:81282404-81282423 None:intergenic 55.0%
ACACTGGATGGAGACCCTGA+AGG - chr3_1:81282425-81282444 None:intergenic 55.0%
!! TACCGCATCAGAGGTGTCAG+AGG - chr3_1:81282780-81282799 None:intergenic 55.0%
TCACAAGAGAGAGCGAGGGA+GGG - chr3_1:81283296-81283315 None:intergenic 55.0%
!! AATACGGTTTTCGGGGGGTC+GGG - chr3_1:81286312-81286331 None:intergenic 55.0%
!! CAATACGGTTTTCGGGGGGT+CGG - chr3_1:81286313-81286332 None:intergenic 55.0%
GGGACAAGTCGAATTGCACC+GGG - chr3_1:81286716-81286735 None:intergenic 55.0%
GGGGACAAGTCGAATTGCAC+CGG - chr3_1:81286717-81286736 None:intergenic 55.0%
CCCCAATCCCTAATGCAGTC+TGG + chr3_1:81286733-81286752 Msa0379870:intron 55.0%
GAGCGGACCAGACTGCATTA+GGG - chr3_1:81286743-81286762 None:intergenic 55.0%
CTAATGCAGTCTGGTCCGCT+CGG + chr3_1:81286742-81286761 Msa0379870:intron 55.0%
GTCCGCTCGGATATGCAGTT+TGG + chr3_1:81286755-81286774 Msa0379870:intron 55.0%
! TGATAGCTTGGTGGCTAGGG+CGG - chr3_1:81287219-81287238 None:intergenic 55.0%
GCGTCAAAACCTTCCCATGC+TGG + chr3_1:81290397-81290416 Msa0379870:five_prime_UTR 55.0%
AAAACCTTCCCATGCTGGGG+AGG + chr3_1:81290402-81290421 Msa0379870:five_prime_UTR 55.0%
AAACCTTCCCATGCTGGGGA+GGG + chr3_1:81290403-81290422 Msa0379870:five_prime_UTR 55.0%
GATCCTTGAGAACCATGCCC+GGG - chr3_1:81290486-81290505 None:intergenic 55.0%
GCATCTTGTGAGGCAGAACG+AGG + chr3_1:81291123-81291142 Msa0379870:CDS 55.0%
! ATTCCCACAACCGAGGGTGT+TGG - chr3_1:81291222-81291241 None:intergenic 55.0%
GATGATGAGACCGCTTGCGA+TGG + chr3_1:81291348-81291367 Msa0379870:CDS 55.0%
AGGAACAAGCTGCGAAACGG+AGG + chr3_1:81291592-81291611 Msa0379870:CDS 55.0%
GTCCCGGTTCCAAGCCCTTA+GGG - chr3_1:81280331-81280350 None:intergenic 60.0%
CTAAGGGCTTGGAACCGGGA+CGG + chr3_1:81280330-81280349 Msa0379870:intron 60.0%
TAAGGGCTTGGAACCGGGAC+GGG + chr3_1:81280331-81280350 Msa0379870:intron 60.0%
GGCAACTCACCAGCTTCAGG+TGG + chr3_1:81280845-81280864 Msa0379870:five_prime_UTR 60.0%
CGCCTCTGACACCTCTGATG+CGG + chr3_1:81282775-81282794 Msa0379870:five_prime_UTR 60.0%
CTCACAAGAGAGAGCGAGGG+AGG - chr3_1:81283297-81283316 None:intergenic 60.0%
CTCCCTCGCTCTCTCTTGTG+AGG + chr3_1:81283295-81283314 Msa0379870:intron 60.0%
!! ATACGGTTTTCGGGGGGTCG+GGG - chr3_1:81286311-81286330 None:intergenic 60.0%
CGAGCGGACCAGACTGCATT+AGG - chr3_1:81286744-81286763 None:intergenic 60.0%
TGTGGGGGGTTGTCAGAGAC+AGG - chr3_1:81286782-81286801 None:intergenic 60.0%
TGGCTAGGGCGGAGGAGTTA+AGG - chr3_1:81287208-81287227 None:intergenic 60.0%
ATTTGACCCGTGCTCCGCAC+AGG + chr3_1:81288069-81288088 Msa0379870:intron 60.0%
ATTCCCTCCCCAGCATGGGA+AGG - chr3_1:81290409-81290428 None:intergenic 60.0%
CAACCCGGGCATGGTTCTCA+AGG + chr3_1:81290480-81290499 Msa0379870:CDS 60.0%
CGTCCCGGTTCCAAGCCCTT+AGG - chr3_1:81280332-81280351 None:intergenic 65.0%
GGCGCAGCCACCAAACCAAC+AGG - chr3_1:81281089-81281108 None:intergenic 65.0%
!! TACGGTTTTCGGGGGGTCGG+GGG - chr3_1:81286310-81286329 None:intergenic 65.0%
! TAGCTTGGTGGCTAGGGCGG+AGG - chr3_1:81287216-81287235 None:intergenic 65.0%
GAGGAGGCAGCATGCGACGA+TGG + chr3_1:81291534-81291553 Msa0379870:CDS 65.0%
ACCAGTGGGGCCCGGGAAAC+AGG + chr3_1:81281227-81281246 Msa0379870:intron 70.0%
TCCTGTTTCCCGGGCCCCAC+TGG - chr3_1:81281231-81281250 None:intergenic 70.0%
CGGGGTTCAGCGAGCTGTCG+TGG - chr3_1:81281909-81281928 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 81279633 81291671 81279633 ID=Msa0379870;Name=Msa0379870
chr3_1 mRNA 81279633 81291671 81279633 ID=Msa0379870-mRNA-1;Parent=Msa0379870;Name=Msa0379870-mRNA-1;_AED=0.11;_eAED=0.11;_QI=2421|1|0.94|1|0.75|0.76|17|0|321
chr3_1 exon 81279633 81279876 81279633 ID=Msa0379870-mRNA-1:exon:20580;Parent=Msa0379870-mRNA-1
chr3_1 exon 81280808 81280894 81280808 ID=Msa0379870-mRNA-1:exon:20581;Parent=Msa0379870-mRNA-1
chr3_1 exon 81282132 81282442 81282132 ID=Msa0379870-mRNA-1:exon:20582;Parent=Msa0379870-mRNA-1
chr3_1 exon 81282531 81282642 81282531 ID=Msa0379870-mRNA-1:exon:20583;Parent=Msa0379870-mRNA-1
chr3_1 exon 81282732 81282796 81282732 ID=Msa0379870-mRNA-1:exon:20584;Parent=Msa0379870-mRNA-1
chr3_1 exon 81283700 81283897 81283700 ID=Msa0379870-mRNA-1:exon:20585;Parent=Msa0379870-mRNA-1
chr3_1 exon 81283978 81284053 81283978 ID=Msa0379870-mRNA-1:exon:20586;Parent=Msa0379870-mRNA-1
chr3_1 exon 81284226 81284334 81284226 ID=Msa0379870-mRNA-1:exon:20587;Parent=Msa0379870-mRNA-1
chr3_1 exon 81284686 81284742 81284686 ID=Msa0379870-mRNA-1:exon:20588;Parent=Msa0379870-mRNA-1
chr3_1 exon 81285281 81285412 81285281 ID=Msa0379870-mRNA-1:exon:20589;Parent=Msa0379870-mRNA-1
chr3_1 exon 81285758 81285958 81285758 ID=Msa0379870-mRNA-1:exon:20590;Parent=Msa0379870-mRNA-1
chr3_1 exon 81286035 81286090 81286035 ID=Msa0379870-mRNA-1:exon:20591;Parent=Msa0379870-mRNA-1
chr3_1 exon 81286169 81286262 81286169 ID=Msa0379870-mRNA-1:exon:20592;Parent=Msa0379870-mRNA-1
chr3_1 exon 81288958 81289051 81288958 ID=Msa0379870-mRNA-1:exon:20593;Parent=Msa0379870-mRNA-1
chr3_1 exon 81289309 81289671 81289309 ID=Msa0379870-mRNA-1:exon:20594;Parent=Msa0379870-mRNA-1
chr3_1 exon 81290211 81290609 81290211 ID=Msa0379870-mRNA-1:exon:20595;Parent=Msa0379870-mRNA-1
chr3_1 exon 81290883 81291671 81290883 ID=Msa0379870-mRNA-1:exon:20596;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81279633 81279876 81279633 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81280808 81280894 81280808 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81282132 81282442 81282132 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81282531 81282642 81282531 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81282732 81282796 81282732 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81283700 81283897 81283700 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81283978 81284053 81283978 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81284226 81284334 81284226 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81284686 81284742 81284686 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81285281 81285412 81285281 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81285758 81285958 81285758 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81286035 81286090 81286035 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81286169 81286262 81286169 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81288958 81289051 81288958 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81289309 81289671 81289309 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 five_prime_UTR 81290211 81290432 81290211 ID=Msa0379870-mRNA-1:five_prime_utr;Parent=Msa0379870-mRNA-1
chr3_1 CDS 81290433 81290609 81290433 ID=Msa0379870-mRNA-1:cds;Parent=Msa0379870-mRNA-1
chr3_1 CDS 81290883 81291671 81290883 ID=Msa0379870-mRNA-1:cds;Parent=Msa0379870-mRNA-1
Gene Sequence

>Msa0379870

ATGACTCTATTGTCTGGATCATCGTTTTTGGATCCTCAATCTTTTAACAACCCGGGCATGGTTCTCAAGGATCTTTTTGAGCCAGGTACTACAGCAGGAACAACATCGGCACAGTGCCAATCTTTTGACCAGCGATCATCTGATTATCGCTTCGATAATTCAATATTTTCGATGGAGGAAGACACAGATCTTGGTGAACAATTTATGTATTTGGCCACAGATACCAACTTCCAACAAGTGGCTGGAGTTACACCTCAATGTTCTTTGCCTTACCTTCCAAGGGATTGTGGAAATGGGACTAATCACATACCAGAAATCTCTCTGCAAGAGGCAGTGTCATCACCAAGTAGTGCCTCAGGTGATACAGAAGATATTGGGGTCACTGAATACTGCCATGAAGATTGGAATGAGCCCATAGCATCTTGTGAGGCAGAACGAGGTGAAAAAATCTGTTCACCCATAGCAAATACAGAGCATTTTATAGATATTTCTGGTTCTGCTGGCAACAATTTTCCAACACCCTCGGTTGTGGGAATTTCTCAAGACTCCATTATGAGGTTTGATGGTTACAATGGTGATATTCACTCTCCCTGTCAGGAAACTACCACATTAACATGGCATCAAGTTTCTGATGCAGTAGTAGATGATGAGACCGCTTGCGATGGTCAGATAGATATTTCTGGTTCTGCTGGCAACAATTTGCCAACATCCTCAGTCGTGGGAATTTCTCAAGAACCTAATTGTGATGGTTACCAGAATGGAGATATTCACTCTCCCTGTCTGGAAACTCCCACAGTAACATTGCATCAAGTTTCTGATGCAGTAGACGAGGAGGCAGCATGCGACGATGGTAAGATGATTGATGGTACGGAACCTGATATTTCTGAGGAACAAGCTGCGAAACGGAGGCGAGTTATGCCTCTAGAAGGTAGAAGCGAAGAAATTGTGACAGAATCCAATTTGTAG
Protein sequence

>Msa0379870

MTLLSGSSFLDPQSFNNPGMVLKDLFEPGTTAGTTSAQCQSFDQRSSDYRFDNSIFSMEEDTDLGEQFMYLATDTNFQQVAGVTPQCSLPYLPRDCGNGTNHIPEISLQEAVSSPSSASGDTEDIGVTEYCHEDWNEPIASCEAERGEKICSPIANTEHFIDISGSAGNNFPTPSVVGISQDSIMRFDGYNGDIHSPCQETTTLTWHQVSDAVVDDETACDGQIDISGSAGNNLPTSSVVGISQEPNCDGYQNGDIHSPCLETPTVTLHQVSDAVDEEAACDDGKMIDGTEPDISEEQAAKRRRVMPLEGRSEEIVTESNL*