AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0380170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380170 MtrunA17_Chr3g0128001 98.516 337 5 0 1 337 1 337 0.0 696
Msa0380170 MtrunA17_Chr8g0345831 57.975 326 132 3 15 336 18 342 4.03e-139 398
Msa0380170 MtrunA17_Chr1g0184161 40.294 340 197 4 1 336 1 338 3.08e-91 276
Msa0380170 MtrunA17_Chr7g0220011 41.617 334 192 3 1 332 1 333 2.52e-86 263
Msa0380170 MtrunA17_Chr7g0220001 41.411 326 188 3 1 324 3 327 4.04e-86 263
Msa0380170 MtrunA17_Chr1g0184151 39.875 321 185 5 8 324 10 326 2.28e-82 253
Msa0380170 MtrunA17_Chr7g0242551 42.056 321 168 6 13 317 24 342 1.53e-81 252
Msa0380170 MtrunA17_Chr1g0184111 37.758 339 206 3 4 338 3 340 7.01e-81 249
Msa0380170 MtrunA17_Chr1g0184101 39.349 338 198 5 4 336 3 338 1.60e-80 248
Msa0380170 MtrunA17_Chr1g0184121 38.769 325 194 3 4 324 3 326 1.14e-79 246
Msa0380170 MtrunA17_Chr1g0179801 38.953 344 193 6 4 333 29 369 6.28e-79 246
Msa0380170 MtrunA17_Chr5g0437181 41.534 313 172 5 15 317 25 336 4.59e-78 243
Msa0380170 MtrunA17_Chr3g0113641 42.547 322 173 6 6 317 18 337 2.07e-77 241
Msa0380170 MtrunA17_Chr4g0006371 40.179 336 170 7 8 317 20 350 4.62e-77 241
Msa0380170 MtrunA17_Chr5g0412671 41.441 333 181 7 15 336 15 344 5.85e-76 237
Msa0380170 MtrunA17_Chr7g0265221 38.416 341 188 4 14 333 37 376 6.03e-76 238
Msa0380170 MtrunA17_Chr7g0250511 38.788 330 194 4 13 336 23 350 3.08e-75 235
Msa0380170 MtrunA17_Chr5g0412651 40.419 334 183 6 15 336 15 344 9.38e-75 234
Msa0380170 MtrunA17_Chr5g0426891 37.318 343 201 6 3 336 4 341 3.75e-74 232
Msa0380170 MtrunA17_Chr5g0412681 41.935 310 172 7 23 328 18 323 2.30e-73 230
Msa0380170 MtrunA17_Chr8g0375601 37.423 326 188 7 13 326 20 341 2.67e-73 231
Msa0380170 MtrunA17_Chr5g0423191 36.778 329 198 5 14 336 23 347 5.84e-73 229
Msa0380170 MtrunA17_Chr6g0455481 36.012 336 211 3 1 333 4 338 1.14e-71 226
Msa0380170 MtrunA17_Chr8g0365241 36.991 319 196 3 13 327 32 349 2.83e-71 225
Msa0380170 MtrunA17_Chr5g0421011 36.391 327 202 4 14 336 23 347 7.01e-71 224
Msa0380170 MtrunA17_Chr5g0423221 37.237 333 198 6 13 338 46 374 7.41e-71 225
Msa0380170 MtrunA17_Chr5g0420981 36.446 332 203 5 13 338 27 356 2.59e-70 223
Msa0380170 MtrunA17_Chr8g0375671 32.628 331 215 3 13 336 27 356 2.66e-70 223
Msa0380170 MtrunA17_Chr3g0109041 37.538 333 191 8 4 324 12 339 4.55e-70 222
Msa0380170 MtrunA17_Chr1g0162191 37.231 325 197 4 5 323 13 336 6.82e-70 222
Msa0380170 MtrunA17_Chr5g0421101 35.671 328 205 4 13 336 22 347 1.86e-69 221
Msa0380170 MtrunA17_Chr5g0420951 36.970 330 200 5 13 336 27 354 1.95e-69 221
Msa0380170 MtrunA17_Chr5g0423251 34.242 330 207 5 13 336 22 347 1.19e-68 218
Msa0380170 MtrunA17_Chr2g0314381 34.557 327 208 3 6 327 45 370 3.61e-68 218
Msa0380170 MtrunA17_Chr7g0239821 37.107 318 195 4 14 327 39 355 5.74e-68 217
Msa0380170 MtrunA17_Chr3g0125201 40.468 299 152 9 38 321 3 290 1.09e-67 214
Msa0380170 MtrunA17_Chr2g0314391 33.739 329 212 3 13 336 45 372 1.95e-67 216
Msa0380170 MtrunA17_Chr5g0423201 33.945 327 213 2 13 336 22 348 3.81e-67 214
Msa0380170 MtrunA17_Chr5g0420941 35.061 328 207 4 13 336 20 345 2.56e-66 212
Msa0380170 MtrunA17_Chr8g0375571 33.333 339 206 4 11 336 18 349 3.49e-66 212
Msa0380170 MtrunA17_Chr8g0371931 37.578 322 188 8 15 327 16 333 6.55e-66 212
Msa0380170 MtrunA17_Chr2g0314401 33.742 326 210 3 13 333 26 350 8.02e-66 211
Msa0380170 MtrunA17_Chr5g0421041 34.242 330 205 6 13 336 22 345 2.83e-64 207
Msa0380170 MtrunA17_Chr7g0239111 35.152 330 207 5 14 338 30 357 5.05e-64 207
Msa0380170 MtrunA17_Chr1g0187821 35.465 344 204 6 5 336 32 369 7.81e-64 206
Msa0380170 MtrunA17_Chr8g0371921 37.267 322 189 8 15 327 16 333 1.06e-63 206
Msa0380170 MtrunA17_Chr3g0087031 34.472 322 201 5 14 328 34 352 1.29e-63 206
Msa0380170 MtrunA17_Chr3g0102041 36.527 334 199 8 3 327 4 333 2.20e-63 205
Msa0380170 MtrunA17_Chr6g0472861 35.511 352 201 11 5 338 31 374 3.52e-63 205
Msa0380170 MtrunA17_Chr3g0126741 37.908 306 175 7 37 333 58 357 5.88e-63 204
Msa0380170 MtrunA17_Chr8g0348081 36.364 308 183 5 38 336 60 363 1.03e-62 203
Msa0380170 MtrunA17_Chr5g0420901 33.333 330 214 4 13 338 21 348 1.19e-62 203
Msa0380170 MtrunA17_Chr5g0405411 34.835 333 204 9 3 326 4 332 1.28e-62 203
Msa0380170 MtrunA17_Chr7g0239101 35.404 322 203 4 10 327 26 346 1.57e-62 203
Msa0380170 MtrunA17_Chr8g0336781 36.039 308 185 4 38 336 95 399 3.69e-62 203
Msa0380170 MtrunA17_Chr5g0421091 32.759 348 221 6 2 338 3 348 5.17e-62 201
Msa0380170 MtrunA17_Chr7g0239121 35.000 320 200 6 14 327 26 343 2.33e-61 200
Msa0380170 MtrunA17_Chr3g0114861 40.446 314 178 7 14 321 16 326 2.96e-61 199
Msa0380170 MtrunA17_Chr2g0296371 33.133 332 208 7 15 336 28 355 4.45e-61 199
Msa0380170 MtrunA17_Chr2g0311921 35.831 307 186 3 38 336 54 357 4.93e-61 199
Msa0380170 MtrunA17_Chr8g0375701 34.462 325 203 7 15 333 31 351 2.44e-60 197
Msa0380170 MtrunA17_Chr8g0336851 35.714 308 185 5 38 336 60 363 2.70e-60 197
Msa0380170 MtrunA17_Chr4g0050031 34.650 329 194 11 4 317 24 346 3.68e-60 197
Msa0380170 MtrunA17_Chr8g0336751 37.134 307 181 5 38 336 94 396 4.35e-60 197
Msa0380170 MtrunA17_Chr1g0187811 33.811 349 210 8 5 336 148 492 8.18e-60 199
Msa0380170 MtrunA17_Chr1g0187831 32.955 352 209 7 5 338 33 375 1.22e-59 196
Msa0380170 MtrunA17_Chr1g0184241 35.799 338 203 7 5 336 37 366 1.39e-59 195
Msa0380170 MtrunA17_Chr8g0375681 38.406 276 162 4 67 338 15 286 1.40e-59 193
Msa0380170 MtrunA17_Chr1g0161041 37.612 335 197 7 8 336 66 394 2.03e-59 196
Msa0380170 MtrunA17_Chr4g0045411 35.494 324 178 8 19 319 12 327 2.65e-59 194
Msa0380170 MtrunA17_Chr1g0162321 34.571 350 192 9 10 327 42 386 3.92e-59 195
Msa0380170 MtrunA17_Chr5g0423211 33.129 326 210 4 14 333 23 346 3.95e-59 194
Msa0380170 MtrunA17_Chr2g0289341 34.932 292 172 7 35 317 1 283 4.52e-59 192
Msa0380170 MtrunA17_Chr1g0162351 34.286 350 193 9 10 327 42 386 5.34e-59 195
Msa0380170 MtrunA17_Chr2g0311831 35.179 307 187 5 38 336 68 370 5.57e-59 194
Msa0380170 MtrunA17_Chr1g0162361 33.934 333 194 6 15 328 4 329 8.77e-59 192
Msa0380170 MtrunA17_Chr6g0474391 35.673 342 181 9 11 326 39 367 1.12e-58 193
Msa0380170 MtrunA17_Chr8g0336761 35.714 308 185 5 38 336 60 363 1.25e-58 193
Msa0380170 MtrunA17_Chr1g0204181 35.694 353 185 10 1 327 27 363 1.68e-58 193
Msa0380170 MtrunA17_Chr7g0225881 35.159 347 194 9 8 335 34 368 2.52e-58 192
Msa0380170 MtrunA17_Chr4g0055591 33.923 339 211 5 5 336 28 360 3.41e-58 192
Msa0380170 MtrunA17_Chr1g0161081 36.686 338 202 7 5 336 40 371 5.21e-58 191
Msa0380170 MtrunA17_Chr8g0354241 33.923 339 202 7 13 336 42 373 5.46e-58 192
Msa0380170 MtrunA17_Chr8g0336631 35.275 309 186 5 38 336 60 364 1.26e-57 190
Msa0380170 MtrunA17_Chr3g0145171 35.473 296 181 6 37 324 51 344 1.38e-57 190
Msa0380170 MtrunA17_Chr8g0336861 34.304 309 190 5 38 336 60 365 3.57e-57 189
Msa0380170 MtrunA17_Chr8g0351101 35.588 340 197 8 2 325 22 355 6.05e-57 189
Msa0380170 MtrunA17_Chr7g0235951 31.778 343 217 6 5 336 36 372 1.20e-56 188
Msa0380170 MtrunA17_Chr8g0354261 33.333 339 204 7 13 336 42 373 2.61e-56 187
Msa0380170 MtrunA17_Chr1g0161111 36.391 338 203 7 5 336 99 430 2.62e-56 189
Msa0380170 MtrunA17_Chr8g0370711 37.288 295 173 5 37 320 51 344 5.61e-56 186
Msa0380170 MtrunA17_Chr4g0045431 35.693 339 188 9 18 331 7 340 1.21e-55 185
Msa0380170 MtrunA17_Chr7g0232161 38.168 262 157 4 14 271 35 295 1.66e-55 184
Msa0380170 MtrunA17_Chr2g0311681 35.836 293 172 5 37 317 62 350 1.66e-55 185
Msa0380170 MtrunA17_Chr5g0424201 36.422 313 187 7 13 317 18 326 1.74e-55 184
Msa0380170 MtrunA17_Chr2g0311861 35.831 307 165 6 38 336 64 346 1.83e-55 184
Msa0380170 MtrunA17_Chr4g0045471 36.086 327 178 10 17 317 6 327 4.08e-55 183
Msa0380170 MtrunA17_Chr4g0064781 36.364 275 172 3 38 310 50 323 5.20e-55 183
Msa0380170 MtrunA17_Chr4g0045441 33.628 339 195 8 18 331 7 340 6.78e-55 183
Msa0380170 MtrunA17_Chr2g0311741 34.459 296 184 5 37 326 26 317 7.40e-55 182
Msa0380170 MtrunA17_Chr2g0311691 34.483 319 191 6 13 317 36 350 7.48e-55 183
Msa0380170 MtrunA17_Chr3g0093761 34.756 328 204 6 15 336 29 352 8.74e-55 182
Msa0380170 MtrunA17_Chr2g0311761 32.484 314 187 4 38 336 68 371 1.59e-54 182
Msa0380170 MtrunA17_Chr5g0398291 35.897 312 177 10 8 302 14 319 2.12e-54 182
Msa0380170 MtrunA17_Chr8g0370721 39.068 279 163 4 38 310 52 329 3.19e-54 181
Msa0380170 MtrunA17_Chr3g0093741 33.232 328 210 5 15 336 29 353 3.33e-54 181
Msa0380170 MtrunA17_Chr2g0311711 35.959 292 174 6 37 319 66 353 4.10e-54 181
Msa0380170 MtrunA17_Chr1g0167911 32.219 329 206 7 5 324 23 343 4.82e-54 181
Msa0380170 MtrunA17_Chr5g0420721 36.032 247 156 2 91 336 4 249 1.17e-53 177
Msa0380170 MtrunA17_Chr3g0093751 32.927 328 211 5 15 336 29 353 1.42e-53 179
Msa0380170 MtrunA17_Chr7g0239071 35.473 296 186 4 44 338 11 302 1.61e-53 178
Msa0380170 MtrunA17_Chr2g0311701 35.099 302 180 5 37 326 68 365 1.82e-53 180
Msa0380170 MtrunA17_Chr3g0145181 36.882 263 164 2 50 310 67 329 2.31e-52 176
Msa0380170 MtrunA17_Chr3g0121141 32.797 311 190 8 35 336 1 301 3.16e-52 175
Msa0380170 MtrunA17_Chr5g0424211 34.091 308 188 8 1 296 1 305 5.88e-52 175
Msa0380170 MtrunA17_Chr7g0265351 33.762 311 185 7 36 336 37 336 7.54e-52 174
Msa0380170 MtrunA17_Chr1g0191201 35.197 304 159 9 38 316 53 343 7.34e-51 173
Msa0380170 MtrunA17_Chr7g0236011 33.333 336 207 5 13 336 42 372 1.31e-50 172
Msa0380170 MtrunA17_Chr4g0045451 33.129 326 188 9 18 318 7 327 1.37e-50 171
Msa0380170 MtrunA17_Chr4g0066121 35.862 290 172 6 38 317 60 345 1.41e-50 172
Msa0380170 MtrunA17_Chr7g0266651 32.081 346 219 8 1 336 22 361 3.66e-49 168
Msa0380170 MtrunA17_Chr8g0364471 30.409 342 221 6 5 335 36 371 4.16e-49 168
Msa0380170 MtrunA17_Chr5g0439011 33.562 292 174 7 37 317 4 286 5.60e-49 166
Msa0380170 MtrunA17_Chr3g0145201 36.882 263 164 2 50 310 702 964 6.37e-49 176
Msa0380170 MtrunA17_Chr7g0239091 34.161 322 187 7 15 327 136 441 7.41e-49 170
Msa0380170 MtrunA17_Chr2g0311631 33.819 343 193 10 14 336 32 360 2.26e-48 166
Msa0380170 MtrunA17_Chr8g0335411 31.728 353 215 9 2 336 28 372 2.57e-46 161
Msa0380170 MtrunA17_Chr3g0125421 34.056 323 184 10 13 316 14 326 4.37e-46 160
Msa0380170 MtrunA17_Chr1g0167951 30.499 341 219 8 5 336 23 354 5.85e-46 159
Msa0380170 MtrunA17_Chr4g0011311 33.824 272 168 5 13 279 42 306 1.62e-45 157
Msa0380170 MtrunA17_Chr2g0332191 32.803 314 194 8 14 317 27 333 1.65e-45 159
Msa0380170 MtrunA17_Chr3g0130391 32.203 354 194 12 1 326 34 369 1.19e-44 157
Msa0380170 MtrunA17_Chr7g0247991 32.797 311 194 5 37 336 66 372 2.18e-44 156
Msa0380170 MtrunA17_Chr2g0319491 33.784 296 174 9 29 317 25 305 3.65e-44 154
Msa0380170 MtrunA17_Chr4g0066991 31.778 343 197 9 5 336 36 352 6.69e-44 154
Msa0380170 MtrunA17_Chr1g0167961 32.881 295 174 7 30 310 61 345 8.61e-44 154
Msa0380170 MtrunA17_Chr7g0235981 35.401 274 166 5 69 336 58 326 1.01e-43 153
Msa0380170 MtrunA17_Chr2g0314371 31.707 287 166 5 13 272 27 310 2.48e-43 152
Msa0380170 MtrunA17_Chr8g0384461 30.189 318 206 6 13 318 24 337 2.69e-43 153
Msa0380170 MtrunA17_Chr4g0045461 32.733 333 201 8 18 329 7 337 3.36e-43 152
Msa0380170 MtrunA17_Chr3g0092531 33.564 289 176 7 38 317 6 287 9.99e-42 147
Msa0380170 MtrunA17_Chr3g0114871 34.457 267 158 8 15 273 18 275 1.08e-41 146
Msa0380170 MtrunA17_Chr2g0285931 30.818 318 192 10 26 326 16 322 1.28e-41 147
Msa0380170 MtrunA17_Chr1g0167931 29.968 317 163 6 5 310 23 291 1.37e-39 142
Msa0380170 MtrunA17_Chr6g0488511 33.456 272 164 8 38 300 3 266 2.59e-39 140
Msa0380170 MtrunA17_Chr4g0068891 31.731 312 191 9 38 337 20 321 4.02e-39 140
Msa0380170 MtrunA17_Chr8g0362741 33.080 263 149 5 13 268 42 284 9.23e-39 139
Msa0380170 MtrunA17_Chr2g0313111 30.619 307 190 11 31 326 20 314 1.32e-38 139
Msa0380170 MtrunA17_Chr1g0148771 31.579 323 191 10 12 317 27 336 6.69e-38 138
Msa0380170 MtrunA17_Chr5g0394071 42.169 166 89 2 152 317 5 163 7.05e-38 133
Msa0380170 MtrunA17_Chr1g0170631 38.462 182 108 2 149 328 3 182 1.17e-37 133
Msa0380170 MtrunA17_Chr8g0384481 32.343 303 170 10 38 318 59 348 1.67e-37 138
Msa0380170 MtrunA17_Chr1g0194321 29.326 341 203 10 16 334 6 330 8.36e-37 135
Msa0380170 MtrunA17_Chr5g0420881 41.379 145 85 0 194 338 1 145 2.62e-36 128
Msa0380170 MtrunA17_Chr8g0358941 27.795 331 203 9 27 334 13 330 1.03e-35 132
Msa0380170 MtrunA17_Chr3g0105281 28.720 289 182 5 38 320 34 304 1.48e-35 131
Msa0380170 MtrunA17_Chr4g0075471 43.919 148 76 3 174 317 10 154 1.81e-35 126
Msa0380170 MtrunA17_Chr3g0126761 42.690 171 94 4 149 317 44 212 5.61e-35 127
Msa0380170 MtrunA17_Chr7g0233661 45.833 144 71 2 174 317 1 137 8.53e-35 124
Msa0380170 MtrunA17_Chr6g0486831 30.847 295 177 10 23 294 7 297 2.62e-32 123
Msa0380170 MtrunA17_Chr4g0053251 30.450 289 172 7 34 296 4 289 1.14e-31 121
Msa0380170 MtrunA17_Chr1g0158011 33.641 217 135 5 124 336 49 260 1.23e-31 119
Msa0380170 MtrunA17_Chr4g0037611 40.940 149 80 3 170 317 12 153 2.46e-30 114
Msa0380170 MtrunA17_Chr8g0336801 38.816 152 89 2 188 336 5 155 3.77e-30 112
Msa0380170 MtrunA17_Chr8g0348951 28.179 291 192 7 37 317 9 292 8.63e-30 116
Msa0380170 MtrunA17_Chr8g0336871 37.356 174 99 3 162 332 3 169 1.29e-29 111
Msa0380170 MtrunA17_Chr4g0064771 38.037 163 100 1 150 311 27 189 1.68e-29 112
Msa0380170 MtrunA17_Chr4g0052251 30.195 308 188 12 35 326 26 322 2.96e-29 114
Msa0380170 MtrunA17_Chr8g0336831 33.333 183 114 2 38 214 60 240 2.22e-28 110
Msa0380170 MtrunA17_Chr8g0364171 44.715 123 67 1 136 258 5 126 1.38e-27 105
Msa0380170 MtrunA17_Chr8g0389941 29.393 313 191 13 41 331 37 341 7.50e-27 108
Msa0380170 MtrunA17_Chr4g0055911 29.304 273 174 8 37 294 8 276 1.02e-26 107
Msa0380170 MtrunA17_Chr1g0170641 35.211 142 85 2 13 149 22 161 2.43e-26 102
Msa0380170 MtrunA17_Chr3g0138351 28.846 312 203 8 38 334 7 314 3.06e-26 106
Msa0380170 MtrunA17_Chr2g0293931 34.000 200 119 7 149 337 7 204 5.59e-26 103
Msa0380170 MtrunA17_Chr7g0219991 48.598 107 54 1 150 256 249 354 8.23e-26 105
Msa0380170 MtrunA17_Chr7g0219991 36.601 153 93 3 1 149 1 153 7.66e-25 103
Msa0380170 MtrunA17_Chr4g0004071 26.537 309 193 7 36 325 7 300 1.95e-25 103
Msa0380170 MtrunA17_Chr1g0184141 37.984 129 78 2 74 201 1 128 2.38e-25 99.0
Msa0380170 MtrunA17_Chr4g0009561 27.215 316 196 9 38 330 7 311 3.89e-25 103
Msa0380170 MtrunA17_Chr4g0004061 26.537 309 200 7 38 330 9 306 6.20e-25 102
Msa0380170 MtrunA17_Chr1g0158021 28.889 225 140 7 36 250 47 261 7.05e-25 101
Msa0380170 MtrunA17_Chr4g0055871 28.159 277 167 10 37 294 8 271 6.07e-24 100
Msa0380170 MtrunA17_Chr8g0375581 48.235 85 44 0 170 254 1 85 3.45e-23 91.7
Msa0380170 MtrunA17_Chr7g0247741 25.581 301 202 7 29 317 2 292 7.29e-23 97.1
Msa0380170 MtrunA17_Chr3g0092581 36.478 159 97 4 161 317 3 159 1.07e-22 93.6
Msa0380170 MtrunA17_Chr5g0407781 25.817 306 210 7 36 336 3 296 1.55e-22 95.9
Msa0380170 MtrunA17_Chr5g0407731 24.555 281 203 4 38 317 33 305 8.03e-22 94.4
Msa0380170 MtrunA17_Chr4g0009541 25.086 291 205 6 38 317 7 295 3.17e-21 92.4
Msa0380170 MtrunA17_Chr1g0158031 32.796 186 110 5 159 336 1 179 1.37e-20 87.8
Msa0380170 MtrunA17_Chr1g0148781 27.124 306 195 10 27 317 9 301 2.15e-20 90.1
Msa0380170 MtrunA17_Chr1g0167921 35.938 128 74 2 138 258 31 157 3.11e-20 86.7
Msa0380170 MtrunA17_Chr2g0319521 38.136 118 65 3 148 258 8 124 1.06e-18 81.3
Msa0380170 MtrunA17_Chr1g0161101 45.045 111 49 4 188 296 400 500 7.18e-18 84.3
Msa0380170 MtrunA17_Chr7g0235991 31.507 146 90 3 39 178 22 163 8.45e-17 77.8
Msa0380170 MtrunA17_Chr2g0311611 50.704 71 27 2 194 257 1 70 1.85e-16 73.2
Msa0380170 MtrunA17_Chr7g0256741 26.022 269 173 6 32 285 6 263 5.23e-16 77.8
Msa0380170 MtrunA17_Chr8g0375641 26.846 149 101 3 13 154 27 174 1.86e-14 70.9
Msa0380170 MtrunA17_Chr8g0375661 28.346 127 84 2 13 133 27 152 3.80e-14 69.7
Msa0380170 MtrunA17_Chr2g0311641 32.624 141 76 4 14 143 32 164 4.30e-14 69.3
Msa0380170 MtrunA17_Chr8g0336791 29.545 132 85 2 38 163 60 189 7.65e-13 66.6
Msa0380170 MtrunA17_Chr2g0293941 32.203 118 70 3 37 154 18 125 2.18e-12 64.7
Msa0380170 MtrunA17_Chr8g0364161 30.252 119 68 2 37 150 66 174 4.90e-12 63.9
Msa0380170 MtrunA17_Chr8g0375621 50.980 51 25 0 173 223 4 54 7.69e-12 60.1
Msa0380170 MtrunA17_Chr5g0420891 28.873 142 93 5 13 149 21 159 1.03e-11 62.8
Msa0380170 MtrunA17_Chr4g0055921 45.161 62 34 0 37 98 8 69 2.92e-11 59.3
Msa0380170 MtrunA17_Chr3g0092571 29.839 124 75 3 38 154 6 124 6.37e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380170 AT5G24530.1 68.529 340 104 1 1 337 1 340 2.50e-179 500
Msa0380170 AT4G10500.1 55.060 336 142 5 6 336 14 345 1.22e-134 387
Msa0380170 AT4G10490.1 53.509 342 150 5 3 336 4 344 2.64e-134 386
Msa0380170 AT2G36690.2 40.483 331 186 4 13 333 30 359 3.50e-80 249
Msa0380170 AT2G36690.1 40.483 331 186 4 13 333 30 359 3.50e-80 249
Msa0380170 AT3G60290.1 40.181 331 189 5 15 338 27 355 1.66e-77 242
Msa0380170 AT2G44800.1 39.394 330 191 4 14 336 26 353 2.79e-77 241
Msa0380170 AT5G05600.1 40.823 316 174 6 13 317 36 349 1.48e-70 224
Msa0380170 AT3G11180.1 40.952 315 175 5 13 317 65 378 1.30e-69 223
Msa0380170 AT2G38240.1 38.141 312 185 5 15 319 23 333 1.31e-69 221
Msa0380170 AT3G11180.2 40.952 315 175 5 13 317 65 378 1.38e-69 223
Msa0380170 AT3G55970.1 40.125 319 173 7 15 317 25 341 6.68e-69 220
Msa0380170 AT3G21420.1 37.389 337 197 6 13 336 26 361 2.69e-68 218
Msa0380170 AT1G77330.1 41.438 292 150 7 38 317 3 285 6.56e-68 215
Msa0380170 AT5G07480.1 35.276 326 194 5 15 328 24 344 1.46e-67 216
Msa0380170 AT3G51240.1 37.346 324 190 8 13 327 13 332 6.30e-67 214
Msa0380170 AT4G16330.2 38.411 302 174 6 37 333 66 360 1.24e-65 211
Msa0380170 AT4G25310.1 34.451 328 205 5 15 336 29 352 1.96e-63 205
Msa0380170 AT1G78550.1 32.743 339 207 5 11 336 25 355 7.56e-63 204
Msa0380170 AT4G25300.1 33.837 331 211 5 13 336 26 355 2.65e-62 202
Msa0380170 AT3G13610.1 35.168 327 203 6 15 336 38 360 3.76e-62 202
Msa0380170 AT1G06620.1 37.864 309 178 6 37 336 61 364 1.46e-61 201
Msa0380170 AT5G43440.1 37.459 307 182 4 37 336 61 364 4.00e-61 200
Msa0380170 AT1G17020.1 33.735 332 211 5 13 336 27 357 5.68e-61 199
Msa0380170 AT5G08640.2 34.483 319 201 7 5 317 9 325 5.75e-61 198
Msa0380170 AT5G08640.1 34.483 319 201 7 5 317 9 325 5.75e-61 198
Msa0380170 AT1G55290.1 34.663 326 203 6 15 334 37 358 1.08e-60 198
Msa0380170 AT1G17010.1 33.735 332 211 5 13 336 27 357 1.17e-60 198
Msa0380170 AT2G30830.1 36.039 308 184 5 38 336 54 357 3.69e-60 197
Msa0380170 AT2G30840.1 37.864 309 178 5 38 336 57 361 3.45e-59 194
Msa0380170 AT5G51810.1 35.503 338 197 10 13 337 40 369 3.96e-59 195
Msa0380170 AT4G25420.1 33.636 330 199 7 13 326 38 363 9.18e-57 189
Msa0380170 AT5G43450.1 37.542 301 178 5 38 332 61 357 1.03e-56 188
Msa0380170 AT1G04380.1 36.364 308 179 6 38 336 45 344 3.37e-56 186
Msa0380170 AT5G05600.2 40.856 257 139 6 13 258 36 290 4.24e-56 184
Msa0380170 AT2G30840.3 37.540 309 173 6 38 336 57 355 5.79e-56 186
Msa0380170 AT1G78550.2 34.875 281 167 3 64 336 5 277 6.76e-56 183
Msa0380170 AT1G03410.2 35.714 336 195 10 5 326 23 351 1.18e-55 185
Msa0380170 AT3G19000.1 34.302 344 190 8 14 328 3 339 1.44e-55 185
Msa0380170 AT1G03410.1 35.714 336 195 10 5 326 60 388 2.78e-55 186
Msa0380170 AT1G03400.1 36.271 295 177 5 37 327 55 342 1.83e-54 182
Msa0380170 AT1G06640.1 34.006 347 207 9 5 336 29 368 5.30e-54 181
Msa0380170 AT1G06650.2 32.659 346 213 7 5 336 29 368 8.02e-54 181
Msa0380170 AT1G12010.1 35.065 308 180 8 39 337 8 304 1.71e-53 179
Msa0380170 AT1G04350.1 34.718 337 203 10 11 336 29 359 2.32e-53 179
Msa0380170 AT4G22880.1 34.754 305 179 7 15 302 18 319 6.99e-53 178
Msa0380170 AT4G22880.2 34.754 305 179 7 15 302 18 319 6.99e-53 178
Msa0380170 AT4G22880.3 34.754 305 179 7 15 302 18 319 6.99e-53 178
Msa0380170 AT3G19010.1 32.278 316 190 6 33 328 23 334 1.12e-52 177
Msa0380170 AT3G19010.4 32.278 316 190 6 33 328 23 334 1.12e-52 177
Msa0380170 AT1G62380.1 36.140 285 167 8 39 317 8 283 1.24e-52 176
Msa0380170 AT4G16330.1 39.044 251 144 4 87 333 9 254 3.08e-52 173
Msa0380170 AT3G55970.2 38.077 260 143 7 15 258 25 282 3.16e-52 175
Msa0380170 AT5G59530.1 34.030 335 206 8 13 336 33 363 1.07e-51 175
Msa0380170 AT3G61400.1 35.669 314 182 7 37 334 59 368 1.50e-51 175
Msa0380170 AT1G06620.2 41.850 227 123 4 37 258 61 283 1.99e-51 172
Msa0380170 AT3G51240.2 38.554 249 145 7 83 327 4 248 2.55e-51 171
Msa0380170 AT5G54000.2 32.923 325 201 7 4 316 11 330 3.44e-51 173
Msa0380170 AT5G20400.1 33.851 322 199 8 15 324 19 338 5.19e-51 173
Msa0380170 AT1G49390.1 33.333 321 202 6 15 324 19 338 6.49e-51 172
Msa0380170 AT5G12270.1 33.431 341 217 6 3 336 21 358 9.69e-51 172
Msa0380170 AT5G63590.1 33.916 286 183 5 37 317 13 297 1.01e-50 171
Msa0380170 AT3G12900.1 32.743 339 213 8 5 336 25 355 1.69e-50 172
Msa0380170 AT1G06645.1 32.853 347 208 8 5 336 42 378 2.91e-50 172
Msa0380170 AT5G59540.1 35.065 308 185 8 30 327 54 356 9.84e-50 170
Msa0380170 AT5G07200.1 33.333 342 201 10 1 327 25 354 1.01e-49 171
Msa0380170 AT1G60980.1 33.528 343 204 10 15 338 36 373 1.43e-49 170
Msa0380170 AT1G03400.2 33.127 323 177 6 37 327 55 370 1.18e-48 167
Msa0380170 AT5G43440.2 40.351 228 129 3 37 260 61 285 1.25e-48 165
Msa0380170 AT1G15550.1 33.648 318 188 7 14 317 29 337 6.44e-48 165
Msa0380170 AT1G05010.1 34.182 275 163 7 35 300 1 266 8.08e-48 164
Msa0380170 AT3G19000.2 35.636 275 141 8 13 258 2 269 1.93e-47 162
Msa0380170 AT5G20550.1 32.573 307 195 6 15 310 19 324 3.96e-47 163
Msa0380170 AT2G25450.1 35.000 280 172 4 13 286 30 305 6.89e-47 162
Msa0380170 AT5G63600.1 31.833 311 190 8 23 320 11 312 2.18e-46 160
Msa0380170 AT2G30840.2 38.596 228 129 3 38 258 57 280 2.43e-46 159
Msa0380170 AT4G25310.2 30.581 327 191 5 15 336 29 324 2.81e-46 160
Msa0380170 AT4G21200.1 31.959 291 158 5 40 317 50 313 3.02e-46 160
Msa0380170 AT1G49390.2 35.000 260 165 4 68 324 1 259 4.57e-46 158
Msa0380170 AT5G07480.2 34.322 236 146 3 100 328 2 235 5.44e-46 157
Msa0380170 AT1G06640.2 35.849 265 152 7 5 258 29 286 6.16e-46 159
Msa0380170 AT5G54000.1 34.661 251 161 3 68 316 1 250 1.12e-45 157
Msa0380170 AT5G63600.2 31.731 312 190 9 23 320 11 313 9.27e-45 156
Msa0380170 AT5G63595.1 32.090 268 159 6 30 295 17 263 1.91e-44 154
Msa0380170 AT1G06640.3 35.249 261 151 7 5 254 29 282 3.02e-44 154
Msa0380170 AT1G80340.1 30.154 325 206 7 6 319 18 332 5.51e-44 154
Msa0380170 AT1G06650.1 34.221 263 157 5 5 257 29 285 1.23e-43 153
Msa0380170 AT1G44090.1 32.733 333 193 11 7 316 29 353 1.49e-43 154
Msa0380170 AT5G43450.2 39.732 224 128 4 38 258 61 280 3.40e-43 151
Msa0380170 AT1G04380.2 40.175 229 123 8 38 260 45 265 5.97e-43 150
Msa0380170 AT5G51810.2 34.981 263 156 8 13 265 40 297 1.22e-42 150
Msa0380170 AT3G19010.3 29.114 316 170 7 33 328 23 304 3.89e-42 149
Msa0380170 AT3G19010.2 33.603 247 140 6 33 259 23 265 7.93e-41 145
Msa0380170 AT5G43935.1 31.438 299 169 9 27 317 12 282 7.99e-41 145
Msa0380170 AT1G78440.1 28.267 329 201 9 26 334 6 319 1.79e-40 145
Msa0380170 AT4G25300.2 36.842 190 119 1 148 336 72 261 3.26e-40 142
Msa0380170 AT3G61400.2 37.179 234 131 5 37 258 59 288 9.52e-40 142
Msa0380170 AT2G19590.1 32.222 270 167 7 38 300 11 271 1.19e-39 142
Msa0380170 AT1G47990.1 32.602 319 185 12 36 337 13 318 4.30e-39 141
Msa0380170 AT4G25420.2 32.046 259 159 6 13 258 38 292 7.83e-39 140
Msa0380170 AT1G30040.1 30.693 303 186 10 37 326 30 321 4.56e-38 139
Msa0380170 AT5G63580.1 36.522 230 133 6 36 258 17 240 5.03e-38 136
Msa0380170 AT1G02400.1 31.847 314 193 9 37 337 23 328 9.42e-38 137
Msa0380170 AT5G63580.2 36.087 230 134 6 36 258 17 240 1.76e-37 134
Msa0380170 AT1G80330.1 31.429 315 190 10 17 317 31 333 1.03e-36 135
Msa0380170 AT5G59540.2 35.593 236 140 7 30 258 54 284 3.75e-36 132
Msa0380170 AT4G23340.1 32.776 299 183 7 29 317 1 291 6.20e-35 130
Msa0380170 AT1G50960.1 29.966 297 169 9 38 317 40 314 7.30e-35 130
Msa0380170 AT3G50210.4 30.841 321 186 9 32 317 2 321 7.38e-34 127
Msa0380170 AT3G50210.1 30.841 321 186 9 32 317 2 321 7.38e-34 127
Msa0380170 AT3G50210.3 30.841 321 186 9 32 317 2 321 7.38e-34 127
Msa0380170 AT2G19590.2 32.917 240 148 6 65 300 26 256 1.27e-33 126
Msa0380170 AT2G34555.1 31.164 292 178 10 38 317 27 307 2.18e-33 126
Msa0380170 AT3G49620.1 29.755 326 190 11 10 302 3 322 6.86e-33 125
Msa0380170 AT3G49630.3 29.655 290 177 7 49 317 29 312 4.00e-30 117
Msa0380170 AT3G49630.1 29.655 290 177 7 49 317 33 316 6.17e-30 117
Msa0380170 AT1G52820.1 26.578 301 195 6 38 323 12 301 2.44e-27 109
Msa0380170 AT4G21690.1 28.571 301 183 10 38 319 47 334 4.69e-26 106
Msa0380170 AT1G30040.2 31.064 235 138 10 37 258 30 253 1.18e-25 103
Msa0380170 AT3G47190.1 26.087 299 187 10 37 320 31 310 1.50e-25 105
Msa0380170 AT3G46500.5 28.114 281 168 10 37 294 16 285 4.72e-25 103
Msa0380170 AT5G58660.1 26.198 313 184 10 37 320 33 327 1.63e-24 102
Msa0380170 AT3G46490.1 28.082 292 171 10 32 294 11 292 5.89e-24 100
Msa0380170 AT4G23340.2 42.188 128 69 3 194 317 47 173 5.95e-24 97.8
Msa0380170 AT4G03070.1 27.796 313 175 11 38 321 14 304 7.72e-24 100
Msa0380170 AT1G02400.2 28.400 250 160 7 37 274 23 265 1.18e-23 98.6
Msa0380170 AT1G35190.1 29.496 278 167 11 41 294 15 287 1.85e-23 99.4
Msa0380170 AT3G46500.7 28.000 275 164 10 37 288 16 279 1.77e-22 95.9
Msa0380170 AT3G46490.2 28.169 284 165 10 32 286 11 284 3.67e-22 95.5
Msa0380170 AT3G50210.2 35.450 189 111 4 140 317 51 239 1.11e-21 92.8
Msa0380170 AT1G35190.2 28.623 276 149 11 41 294 15 264 1.72e-21 93.6
Msa0380170 AT5G51310.1 27.852 298 191 10 38 317 5 296 5.06e-21 92.4
Msa0380170 AT1G14130.1 27.344 256 167 6 38 286 9 252 8.17e-21 91.7
Msa0380170 AT3G49630.2 34.239 184 114 4 140 317 61 243 4.12e-20 88.6
Msa0380170 AT1G52820.2 28.205 234 142 6 38 256 12 234 5.48e-19 85.5
Msa0380170 AT1G14120.2 27.344 256 167 5 38 286 8 251 1.32e-18 85.5
Msa0380170 AT1G14120.1 27.344 256 167 5 38 286 8 251 1.32e-18 85.5
Msa0380170 AT1G14120.3 27.344 256 167 5 38 286 8 251 1.32e-18 85.5
Msa0380170 AT1G52800.1 25.817 306 186 8 29 312 1 287 1.92e-16 79.3
Msa0380170 AT4G16765.3 33.939 165 94 6 137 289 46 207 7.37e-16 76.3
Msa0380170 AT4G16765.6 33.735 166 95 6 136 289 45 207 8.22e-16 76.3
Msa0380170 AT4G16765.1 33.735 166 95 6 136 289 45 207 8.22e-16 76.3
Msa0380170 AT4G16765.2 33.735 166 95 6 136 289 45 207 8.22e-16 76.3
Msa0380170 AT1G28030.1 23.973 292 202 8 37 314 12 297 1.68e-15 76.6
Msa0380170 AT4G22870.1 45.946 74 38 1 227 300 2 73 8.76e-15 70.1
Msa0380170 AT4G16770.1 29.767 215 126 6 38 235 22 228 3.89e-14 71.6
Msa0380170 AT2G06960.1 34.028 144 74 5 185 325 21 146 7.49e-14 68.6
Msa0380170 AT3G46500.10 30.909 165 100 7 141 294 50 211 1.45e-13 70.1
Msa0380170 AT3G46500.1 30.909 165 100 7 141 294 50 211 1.45e-13 70.1
Msa0380170 AT3G46480.1 28.241 216 137 7 87 294 40 245 1.08e-12 68.2
Msa0380170 AT3G46500.4 30.464 151 95 5 152 294 1 149 1.13e-12 66.2
Msa0380170 AT4G22870.2 45.455 66 34 1 235 300 51 114 3.42e-12 63.9
Msa0380170 AT1G80320.1 29.252 147 101 3 141 285 118 263 3.60e-12 66.6
Msa0380170 AT4G16765.4 32.394 142 82 5 136 265 45 184 5.44e-12 64.3
Msa0380170 AT3G46500.3 30.818 159 96 7 141 288 50 205 3.93e-11 62.4
Msa0380170 AT4G16765.5 41.573 89 45 3 206 289 75 161 5.42e-11 61.6

Find 94 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATCAATGCCTCATTATC+TGG 0.139085 3_1:-81847796 None:intergenic
AAATGTTCCTATCATTGATT+TGG 0.233266 3_1:+81842132 Msa0380170:CDS
CACTCAAAATAGAGTTCTTT+GGG 0.245539 3_1:-81841949 None:intergenic
TGTCCATTATATATAATCTT+TGG 0.248643 3_1:-81842009 None:intergenic
TGCAAAGAAGTTAGGGAATT+GGG 0.271569 3_1:+81846933 Msa0380170:CDS
CCACTCAAAATAGAGTTCTT+TGG 0.271876 3_1:-81841950 None:intergenic
GTCCATTATATATAATCTTT+GGG 0.276647 3_1:-81842008 None:intergenic
CACATTTCAGCTCATCTTCC+TGG 0.283902 3_1:+81841899 None:intergenic
TTCGGGTCTGATGTAGCTTT+CGG 0.284448 3_1:-81842071 None:intergenic
CAAATTACTGCAAAGAAGTT+AGG 0.295260 3_1:+81846925 Msa0380170:CDS
AGTAGAATTGTAAGTGCATT+TGG 0.299499 3_1:-81847110 None:intergenic
AATAGAGTTCTTTGGGGTTA+AGG 0.308229 3_1:-81841942 None:intergenic
CAGAACTTGCTATAGTATTC+TGG 0.315699 3_1:-81847877 None:intergenic
CTGAAGAACGAGTAGCTTCC+AGG 0.317604 3_1:-81841917 None:intergenic
TCGGGTCTGATGTAGCTTTC+GGG 0.320790 3_1:-81842070 None:intergenic
ATAACAAAGGCATCAGGAAT+TGG 0.331916 3_1:-81847194 None:intergenic
CTGCAAAGAAGTTAGGGAAT+TGG 0.342594 3_1:+81846932 Msa0380170:CDS
GGAGGATTAGAAGGCCATTC+TGG 0.349419 3_1:-81842891 None:intergenic
CTCCAAGACCTTCATGTTGC+TGG 0.352908 3_1:+81847131 Msa0380170:CDS
CCACAACCAGAACTTACTTA+TGG 0.355751 3_1:+81847068 Msa0380170:CDS
CAGAATACTATAGCAAGTTC+TGG 0.360326 3_1:+81847878 Msa0380170:CDS
TAGACTTCATTGCTATCCTT+TGG 0.360775 3_1:+81842857 Msa0380170:CDS
GACACCAAAGTGCTTTCTTC+CGG 0.368362 3_1:+81842028 Msa0380170:CDS
TTGAATGAAGGAGGATTAGA+AGG 0.374736 3_1:-81842900 None:intergenic
ACGGGCTTTATAAGAGTGTT+TGG 0.379683 3_1:+81847716 Msa0380170:CDS
AATGTTCCTATCATTGATTT+GGG 0.394239 3_1:+81842133 Msa0380170:CDS
ACACAGATTGTGCAGCAAAT+TGG 0.405459 3_1:+81842169 Msa0380170:CDS
AAGACATGGTCTATCAGATT+CGG 0.410372 3_1:-81842089 None:intergenic
TAACAAAGGCATCAGGAATT+GGG 0.411915 3_1:-81847193 None:intergenic
TTATAAGAGTGTTTGGCATC+GGG 0.412161 3_1:+81847723 Msa0380170:CDS
GATTTCAGGCTTTGAGCAAC+GGG 0.412572 3_1:+81847698 Msa0380170:intron
CCTTCATGTTGCTGGCCTAC+AGG 0.415073 3_1:+81847139 Msa0380170:CDS
CAAGCCACTTGCCATCTTTG+AGG 0.423051 3_1:-81847163 None:intergenic
AAGGATAGCAATGAAGTCTA+AGG 0.423736 3_1:-81842854 None:intergenic
CCACTCACAGAAGATGGTTC+TGG 0.430220 3_1:+81847829 Msa0380170:CDS
CAAGTTCTGGAGTAGGGACT+TGG 0.432658 3_1:+81847891 Msa0380170:CDS
ACAAAGAGGAGGTGCACAAT+TGG 0.436674 3_1:+81842823 Msa0380170:CDS
AGAGTACATATCAGAGAGCT+TGG 0.437678 3_1:+81846968 Msa0380170:CDS
ATTGGACAGGTAGTTAATCA+TGG 0.442304 3_1:+81842666 Msa0380170:intron
CTTGGAGAAAGAACACTGTT+TGG 0.442922 3_1:+81847909 Msa0380170:CDS
GGTGAAGCATGCAGCTCCTA+TGG 0.451140 3_1:+81842190 Msa0380170:CDS
AGACATGGTCTATCAGATTC+GGG 0.453451 3_1:-81842088 None:intergenic
GTAGAATTGTAAGTGCATTT+GGG 0.457750 3_1:-81847109 None:intergenic
GGCAATCCATAAGTAAGTTC+TGG 0.459581 3_1:-81847074 None:intergenic
TGGATAATTATGTGCCAGAA+TGG 0.460872 3_1:+81842877 Msa0380170:CDS
GGCCAGCAACATGAAGGTCT+TGG 0.463361 3_1:-81847133 None:intergenic
GATGCCTTTGTTATTAACAT+AGG 0.466138 3_1:+81847203 Msa0380170:CDS
TTTATAAGAGTGTTTGGCAT+CGG 0.466507 3_1:+81847722 Msa0380170:CDS
GAACTTACTTATGGATTGCC+AGG 0.466993 3_1:+81847077 Msa0380170:CDS
TGAGAACCCAAATCAATGAT+AGG 0.480759 3_1:-81842139 None:intergenic
AAATTACTGCAAAGAAGTTA+GGG 0.494544 3_1:+81846926 Msa0380170:CDS
ATTTCTCTGCCCAGATAATG+AGG 0.499626 3_1:+81847786 Msa0380170:CDS
TTGGACAGGTAGTTAATCAT+GGG 0.500876 3_1:+81842667 Msa0380170:intron
ACTATAGCAAGTTCTGGAGT+AGG 0.502999 3_1:+81847884 Msa0380170:CDS
CATAAGTAAGTTCTGGTTGT+GGG 0.510925 3_1:-81847067 None:intergenic
GGCCTACAGGTCCTCAAAGA+TGG 0.511247 3_1:+81847152 Msa0380170:CDS
GCAAAACCACTCACAGAAGA+TGG 0.516365 3_1:+81847823 Msa0380170:CDS
GAGTACATATCAGAGAGCTT+GGG 0.519973 3_1:+81846969 Msa0380170:CDS
GATAGTCTCATTGTCTTCGT+GGG 0.526905 3_1:-81842783 None:intergenic
ATGTTAATAACAAAGGCATC+AGG 0.527782 3_1:-81847200 None:intergenic
CCATAAGTAAGTTCTGGTTG+TGG 0.530829 3_1:-81847068 None:intergenic
TGATTTCAGGCTTTGAGCAA+CGG 0.531282 3_1:+81847697 Msa0380170:intron
ATATCAATGCCTCATTATCT+GGG 0.533372 3_1:-81847795 None:intergenic
AGATAGTCTCATTGTCTTCG+TGG 0.538477 3_1:-81842784 None:intergenic
GTAAGTTCTGGTTGTGGGCA+TGG 0.541546 3_1:-81847062 None:intergenic
TCCATTATATATAATCTTTG+GGG 0.542186 3_1:-81842007 None:intergenic
CTATAGCAAGTTCTGGAGTA+GGG 0.545848 3_1:+81847885 Msa0380170:CDS
AAGAGGAGGTGCACAATTGG+AGG 0.546447 3_1:+81842826 Msa0380170:CDS
GAGTGGACTTACTTGAATGA+AGG 0.551937 3_1:-81842912 None:intergenic
CCAGAACCATCTTCTGTGAG+TGG 0.561586 3_1:-81847829 None:intergenic
AATGAAGCCACAGAAAGTCT+TGG 0.563375 3_1:-81847766 None:intergenic
TAACATAGGTGATCAACTGC+AGG 0.578861 3_1:+81847217 Msa0380170:CDS
ATCACCTATGTTAATAACAA+AGG 0.580615 3_1:-81847207 None:intergenic
TGGACTTACTTGAATGAAGG+AGG 0.584641 3_1:-81842909 None:intergenic
TGAGAAGCCAAGACTTTCTG+TGG 0.587303 3_1:+81847759 Msa0380170:CDS
GCAAAGAAGTTAGGGAATTG+GGG 0.597696 3_1:+81846934 Msa0380170:CDS
TGCCATCTTTGAGGACCTGT+AGG 0.601133 3_1:-81847154 None:intergenic
CCTGTAGGCCAGCAACATGA+AGG 0.602589 3_1:-81847139 None:intergenic
AACTTACTTATGGATTGCCA+GGG 0.609755 3_1:+81847078 Msa0380170:CDS
GATTCCGGAAGAAAGCACTT+TGG 0.619711 3_1:-81842032 None:intergenic
TTTATGTGGCAGGGAAACAG+TGG 0.619822 3_1:+81846902 Msa0380170:intron
AGGGGAACAAGGGCAGCACA+TGG 0.624712 3_1:+81847022 Msa0380170:CDS
AGAGGAGGTGCACAATTGGA+GGG 0.630346 3_1:+81842827 Msa0380170:CDS
GCATTTGGGTCTGTATGCCC+TGG 0.632622 3_1:-81847095 None:intergenic
AGTAACCTTTAAGACGCGAT+AGG 0.638286 3_1:+81847947 Msa0380170:exon
CCATTATATATAATCTTTGG+GGG 0.639970 3_1:-81842006 None:intergenic
ACTCAAAATAGAGTTCTTTG+GGG 0.640456 3_1:-81841948 None:intergenic
AGGTCCTCAAAGATGGCAAG+TGG 0.642199 3_1:+81847159 Msa0380170:CDS
AAAATACAAAGAAAGAACCA+AGG 0.643775 3_1:-81841983 None:intergenic
TCTGGCACATAATTATCCAA+AGG 0.648305 3_1:-81842873 None:intergenic
TGAGAGACTTGAGAAAGACA+TGG 0.680148 3_1:-81842103 None:intergenic
GGTTCTGGAGCTGTATACAG+AGG 0.693142 3_1:+81847844 Msa0380170:CDS
AGTTCTGGTTGTGGGCATGG+TGG 0.698132 3_1:-81847059 None:intergenic
TGGACAGGTAGTTAATCATG+GGG 0.699574 3_1:+81842668 Msa0380170:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAAAAATTGTAATATT+GGG - chr3_1:81842232-81842251 None:intergenic 10.0%
!! TAAACAAAAAATTGTAATAT+TGG - chr3_1:81842233-81842252 None:intergenic 10.0%
!!! CAAATTTTATCATTAATAAA+TGG - chr3_1:81843847-81843866 None:intergenic 10.0%
!!! ATTTTGAAACAATTTTTTTT+GGG + chr3_1:81843910-81843929 Msa0380170:intron 10.0%
!! TAATAAATGAAAATGTTAAT+CGG - chr3_1:81844070-81844089 None:intergenic 10.0%
!!! TTAACATTTTCATTTATTAA+AGG + chr3_1:81844071-81844090 Msa0380170:intron 10.0%
!! ATTCATCAAAAAAAAAAAAA+AGG + chr3_1:81844737-81844756 Msa0380170:intron 10.0%
!!! TTTTTTTTTTTTTTGGAGAA+GGG - chr3_1:81842353-81842372 None:intergenic 15.0%
!!! CCTATTCTTTTTTTTTTTTT+TGG - chr3_1:81842360-81842379 None:intergenic 15.0%
!! CCAAAAAAAAAAAAAAGAAT+AGG + chr3_1:81842357-81842376 Msa0380170:intron 15.0%
!!! CAAGTTATTTTTATAAACAA+GGG - chr3_1:81843075-81843094 None:intergenic 15.0%
!!! ACAAGTTATTTTTATAAACA+AGG - chr3_1:81843076-81843095 None:intergenic 15.0%
!!! ATTGATCATTTATGTTATTT+TGG + chr3_1:81843166-81843185 Msa0380170:intron 15.0%
!! GAAAATATTTACAAACTTAA+AGG + chr3_1:81843345-81843364 Msa0380170:intron 15.0%
!!! TCAAAAACAATTTTCTTTTA+TGG - chr3_1:81843723-81843742 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr3_1:81843909-81843928 Msa0380170:intron 15.0%
!!! TCATTTTGAAACAATTTTTT+TGG + chr3_1:81843908-81843927 Msa0380170:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+GGG + chr3_1:81843909-81843928 Msa0380170:intron 15.0%
!! ATCTATTAATGTTATATTTG+TGG + chr3_1:81844208-81844227 Msa0380170:intron 15.0%
!!! AATTAAATGTATCTAAAATG+TGG - chr3_1:81844408-81844427 None:intergenic 15.0%
!!! AGTAGTTATACTTTTTTATT+TGG - chr3_1:81844774-81844793 None:intergenic 15.0%
!! AAAAAATAATAAATGCATCT+AGG - chr3_1:81844931-81844950 None:intergenic 15.0%
!! ATGATTAAGTTCAAAATTAA+AGG + chr3_1:81845694-81845713 Msa0380170:intron 15.0%
!! TAACATGAAAAAACTAATAA+GGG - chr3_1:81845864-81845883 None:intergenic 15.0%
!!! TGGTAATGAAATTAAAAAAA+AGG - chr3_1:81846201-81846220 None:intergenic 15.0%
!! TTTCAAAAAAAGAAAAGAAA+AGG + chr3_1:81846712-81846731 Msa0380170:intron 15.0%
!! ATGAATTAATAAGCAAATTA+AGG + chr3_1:81846847-81846866 Msa0380170:intron 15.0%
!!! AATATTAATTTTGTGTTGTA+TGG - chr3_1:81847458-81847477 None:intergenic 15.0%
!! TTATTTCAAAGAATAATTCT+AGG + chr3_1:81847477-81847496 Msa0380170:intron 15.0%
!! TCCATTATATATAATCTTTG+GGG - chr3_1:81842010-81842029 None:intergenic 20.0%
!! GTCCATTATATATAATCTTT+GGG - chr3_1:81842011-81842030 None:intergenic 20.0%
!! TGTCCATTATATATAATCTT+TGG - chr3_1:81842012-81842031 None:intergenic 20.0%
!!! TAATTTTGAATAATGGATTC+CGG - chr3_1:81842050-81842069 None:intergenic 20.0%
!!! CAATGAAGATTATTTTAGAT+AGG + chr3_1:81842279-81842298 Msa0380170:intron 20.0%
!! CTATTCATTGTAATTAGAAT+AGG + chr3_1:81842320-81842339 Msa0380170:intron 20.0%
!!! CTTTTTTTTTTTTTTGGAGA+AGG - chr3_1:81842354-81842373 None:intergenic 20.0%
!! AATTGTATTTAGTAGAAATG+AGG - chr3_1:81842390-81842409 None:intergenic 20.0%
!!! GATAGAATAAAATGTCATTT+TGG + chr3_1:81842522-81842541 Msa0380170:intron 20.0%
!! ATATTGTTAATTAATTGGAC+AGG + chr3_1:81842653-81842672 Msa0380170:intron 20.0%
!! AATAATGCTAAATTACACTA+AGG + chr3_1:81843117-81843136 Msa0380170:intron 20.0%
!!! ACATAAGTTTTTTAAGTTTG+AGG + chr3_1:81843193-81843212 Msa0380170:intron 20.0%
!!! ATCATCGTTTTTGTAATATT+TGG - chr3_1:81843306-81843325 None:intergenic 20.0%
!!! GTCTTTTTCATATAAAACAA+GGG - chr3_1:81843585-81843604 None:intergenic 20.0%
!!! TGTCTTTTTCATATAAAACA+AGG - chr3_1:81843586-81843605 None:intergenic 20.0%
!! AAATTATGTGTGAAAAAAGT+TGG + chr3_1:81843624-81843643 Msa0380170:intron 20.0%
!!! AAAAGTTGGAGTATTTATTA+AGG + chr3_1:81843638-81843657 Msa0380170:intron 20.0%
!!! AAAGTTGGAGTATTTATTAA+GGG + chr3_1:81843639-81843658 Msa0380170:intron 20.0%
!!! TATTGAATGTATCTAAAATG+TGG + chr3_1:81844469-81844488 Msa0380170:intron 20.0%
!! TAATCACTATAAATAAGGAA+AGG + chr3_1:81844708-81844727 Msa0380170:intron 20.0%
!! CAAATAGATGTTTACATATA+GGG - chr3_1:81844868-81844887 None:intergenic 20.0%
!! TCAAATAGATGTTTACATAT+AGG - chr3_1:81844869-81844888 None:intergenic 20.0%
!! TTTAATACACATAGAAACAA+AGG + chr3_1:81845007-81845026 Msa0380170:intron 20.0%
!!! TTTTTCTCTCTACTAAATTT+TGG + chr3_1:81845390-81845409 Msa0380170:intron 20.0%
!!! AATTAAGGAGTATTTTATGT+TGG - chr3_1:81845720-81845739 None:intergenic 20.0%
!! CTAACATGAAAAAACTAATA+AGG - chr3_1:81845865-81845884 None:intergenic 20.0%
!! AAATATATGCAATAGTGTAA+CGG - chr3_1:81846143-81846162 None:intergenic 20.0%
!! AATGTGACAATTAAAAATGT+GGG - chr3_1:81846242-81846261 None:intergenic 20.0%
!! AAATGTGACAATTAAAAATG+TGG - chr3_1:81846243-81846262 None:intergenic 20.0%
!! AAAAAAGTTGTGATAAATCA+AGG - chr3_1:81846538-81846557 None:intergenic 20.0%
!!! TATCACAACTTTTTTTTTGA+AGG + chr3_1:81846543-81846562 Msa0380170:intron 20.0%
!!! TCCTTAAGTAATTTTTTTCT+AGG - chr3_1:81846995-81847014 None:intergenic 20.0%
!!! AATTACTTAAGGAATGTTTT+AGG + chr3_1:81847002-81847021 Msa0380170:CDS 20.0%
!!! ATTACTTAAGGAATGTTTTA+GGG + chr3_1:81847003-81847022 Msa0380170:CDS 20.0%
!! ACAAACATTCCTTATAAATT+TGG + chr3_1:81847515-81847534 Msa0380170:intron 20.0%
! AAAATACAAAGAAAGAACCA+AGG - chr3_1:81841986-81842005 None:intergenic 25.0%
! CCATTATATATAATCTTTGG+GGG - chr3_1:81842009-81842028 None:intergenic 25.0%
!!! TTTCGGGTAATTTTGAATAA+TGG - chr3_1:81842057-81842076 None:intergenic 25.0%
!! AAATGTTCCTATCATTGATT+TGG + chr3_1:81842132-81842151 Msa0380170:CDS 25.0%
!!! AATGTTCCTATCATTGATTT+GGG + chr3_1:81842133-81842152 Msa0380170:CDS 25.0%
! TAATCTTCATTGTTCATCTA+TGG - chr3_1:81842271-81842290 None:intergenic 25.0%
! CTATCACTAAAAATTGAACT+GGG - chr3_1:81842507-81842526 None:intergenic 25.0%
! TCTATCACTAAAAATTGAAC+TGG - chr3_1:81842508-81842527 None:intergenic 25.0%
!! ATATTAAACACCGTAAGTTT+TGG + chr3_1:81842617-81842636 Msa0380170:intron 25.0%
!! TATTAAACACCGTAAGTTTT+GGG + chr3_1:81842618-81842637 Msa0380170:intron 25.0%
!!! GTTTTTTTCAATTCTTCTAG+AGG - chr3_1:81842696-81842715 None:intergenic 25.0%
!!! AAGTTTTAATGTGAACAAAG+AGG + chr3_1:81842809-81842828 Msa0380170:CDS 25.0%
! AGTGGTCCTTTAAATTATTT+GGG + chr3_1:81843226-81843245 Msa0380170:intron 25.0%
! ATGTGACCCAAATAATTTAA+AGG - chr3_1:81843235-81843254 None:intergenic 25.0%
!!! TTGTAACAGATTGGTTATTT+TGG - chr3_1:81843383-81843402 None:intergenic 25.0%
! TACAAACCTCAAAATGTTTA+TGG + chr3_1:81843398-81843417 Msa0380170:intron 25.0%
!! CATTTACCATAAACATTTTG+AGG - chr3_1:81843407-81843426 None:intergenic 25.0%
! AATAAATGGGAAAAGTTAAC+CGG - chr3_1:81843833-81843852 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG + chr3_1:81844171-81844190 Msa0380170:intron 25.0%
!!! TATATCTTTTTTTTCCCTGA+GGG - chr3_1:81844276-81844295 None:intergenic 25.0%
!!! TTATATCTTTTTTTTCCCTG+AGG - chr3_1:81844277-81844296 None:intergenic 25.0%
! TGCTTATATTAATAACCAGA+TGG - chr3_1:81844380-81844399 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + chr3_1:81844493-81844512 Msa0380170:intron 25.0%
! TACTCTGTTAAGAAAAAGAT+GGG + chr3_1:81844522-81844541 Msa0380170:intron 25.0%
! GAGACTATTTAAATCGTAAA+GGG - chr3_1:81844638-81844657 None:intergenic 25.0%
! TTAGTCAGTAGTATTAGTTA+GGG - chr3_1:81844965-81844984 None:intergenic 25.0%
! ATTAGTCAGTAGTATTAGTT+AGG - chr3_1:81844966-81844985 None:intergenic 25.0%
!! TACACTAACAACTTTTCTTA+AGG + chr3_1:81845070-81845089 Msa0380170:intron 25.0%
! AGGAATGTGAAAAAAGTAAA+AGG + chr3_1:81845090-81845109 Msa0380170:intron 25.0%
! GGAATGTGAAAAAAGTAAAA+GGG + chr3_1:81845091-81845110 Msa0380170:intron 25.0%
! GAATGTGAAAAAAGTAAAAG+GGG + chr3_1:81845092-81845111 Msa0380170:intron 25.0%
! GGTTTACAACTTTACATATA+GGG + chr3_1:81845113-81845132 Msa0380170:intron 25.0%
! TTTAAAAATGAAGCGATCAA+GGG - chr3_1:81845312-81845331 None:intergenic 25.0%
! ATTTAAAAATGAAGCGATCA+AGG - chr3_1:81845313-81845332 None:intergenic 25.0%
!!! GACTACATTTTTCTTTTTTG+AGG - chr3_1:81845355-81845374 None:intergenic 25.0%
! AGGGATAATATCACTAAAAT+GGG - chr3_1:81845660-81845679 None:intergenic 25.0%
! ATGTGACAATTAAAAATGTG+GGG - chr3_1:81846241-81846260 None:intergenic 25.0%
! TAATTGTTTATAGTTACTCG+TGG + chr3_1:81846272-81846291 Msa0380170:intron 25.0%
!! ATAACGATAGTTTTTCATAG+CGG + chr3_1:81846454-81846473 Msa0380170:intron 25.0%
! TGAAACACAAATTATTGATG+GGG - chr3_1:81846820-81846839 None:intergenic 25.0%
! CTGAAACACAAATTATTGAT+GGG - chr3_1:81846821-81846840 None:intergenic 25.0%
! ACTGAAACACAAATTATTGA+TGG - chr3_1:81846822-81846841 None:intergenic 25.0%
! AAATTACTGCAAAGAAGTTA+GGG + chr3_1:81846926-81846945 Msa0380170:CDS 25.0%
! GCCTAGAAAAAAATTACTTA+AGG + chr3_1:81846991-81847010 Msa0380170:CDS 25.0%
!!! TTACTTAAGGAATGTTTTAG+GGG + chr3_1:81847004-81847023 Msa0380170:CDS 25.0%
! ATCACCTATGTTAATAACAA+AGG - chr3_1:81847210-81847229 None:intergenic 25.0%
! TTTGGTTGACATAAATTGTT+TGG + chr3_1:81847430-81847449 Msa0380170:intron 25.0%
! AACATTCCTTATAAATTTGG+TGG + chr3_1:81847518-81847537 Msa0380170:intron 25.0%
! TATAGAAAAAGAGTAATGCT+AGG - chr3_1:81847603-81847622 None:intergenic 25.0%
ACTCAAAATAGAGTTCTTTG+GGG - chr3_1:81841951-81841970 None:intergenic 30.0%
CACTCAAAATAGAGTTCTTT+GGG - chr3_1:81841952-81841971 None:intergenic 30.0%
CCCCCAAAGATTATATATAA+TGG + chr3_1:81842006-81842025 Msa0380170:exon 30.0%
! AATTAGTCTCCCAAAACTTA+CGG - chr3_1:81842630-81842649 None:intergenic 30.0%
ATTGAAAAAAACAGCAGAAG+TGG + chr3_1:81842704-81842723 Msa0380170:CDS 30.0%
! TTTTAATGTGAACAAAGAGG+AGG + chr3_1:81842812-81842831 Msa0380170:CDS 30.0%
CAAGTATAAAACATGTCACA+AGG - chr3_1:81843025-81843044 None:intergenic 30.0%
GAGTGGTCCTTTAAATTATT+TGG + chr3_1:81843225-81843244 Msa0380170:intron 30.0%
!!! TTTTGAGGTTTGTAACAGAT+TGG - chr3_1:81843392-81843411 None:intergenic 30.0%
ACAAGGGTAGTTTAGTAAAA+GGG - chr3_1:81843569-81843588 None:intergenic 30.0%
AACAAGGGTAGTTTAGTAAA+AGG - chr3_1:81843570-81843589 None:intergenic 30.0%
TGGTTAAGCATACCATAAAA+GGG + chr3_1:81843689-81843708 Msa0380170:intron 30.0%
! ATGGTGATAATTCCCTTTTA+TGG - chr3_1:81843704-81843723 None:intergenic 30.0%
!!! ACACTCATTTTAAAACGGAA+GGG + chr3_1:81844176-81844195 Msa0380170:intron 30.0%
GGTGTACTTGCTTAAAATTA+GGG - chr3_1:81844359-81844378 None:intergenic 30.0%
TGGTGTACTTGCTTAAAATT+AGG - chr3_1:81844360-81844379 None:intergenic 30.0%
GTACTCTGTTAAGAAAAAGA+TGG + chr3_1:81844521-81844540 Msa0380170:intron 30.0%
CGAGACTATTTAAATCGTAA+AGG - chr3_1:81844639-81844658 None:intergenic 30.0%
TCGGCTAATCACTATAAATA+AGG + chr3_1:81844703-81844722 Msa0380170:intron 30.0%
TAGATGTTTACATATAGGGA+CGG - chr3_1:81844864-81844883 None:intergenic 30.0%
TAGTCAGTAGTATTAGTTAG+GGG - chr3_1:81844964-81844983 None:intergenic 30.0%
GGGTTTACAACTTTACATAT+AGG + chr3_1:81845112-81845131 Msa0380170:intron 30.0%
TACAACTTTACATATAGGGA+CGG + chr3_1:81845117-81845136 Msa0380170:intron 30.0%
! ATAATTTTCACTGCATTGAG+TGG + chr3_1:81845174-81845193 Msa0380170:intron 30.0%
AATCCAAAACTTAGTGTGAA+TGG + chr3_1:81845277-81845296 Msa0380170:intron 30.0%
TAAACTGATCTAGTATGGTT+CGG + chr3_1:81845572-81845591 Msa0380170:intron 30.0%
! GGTTCTCGGTTTTTAATATT+GGG + chr3_1:81845593-81845612 Msa0380170:intron 30.0%
GGGATAATATCACTAAAATG+GGG - chr3_1:81845659-81845678 None:intergenic 30.0%
GAGGGATAATATCACTAAAA+TGG - chr3_1:81845661-81845680 None:intergenic 30.0%
TGATGAGAGAAAGTGAATTA+AGG - chr3_1:81845735-81845754 None:intergenic 30.0%
TAATCTCATATCATCACTCA+AGG + chr3_1:81845755-81845774 Msa0380170:intron 30.0%
! AGTTTGAAACACAGAGAATA+TGG + chr3_1:81845896-81845915 Msa0380170:intron 30.0%
TGTGACAATTAAAAATGTGG+GGG - chr3_1:81846240-81846259 None:intergenic 30.0%
!!! CACAACTTTTTTTTTGAAGG+AGG + chr3_1:81846546-81846565 Msa0380170:intron 30.0%
GTACGTAACTAACTTAAGAA+AGG - chr3_1:81846614-81846633 None:intergenic 30.0%
TGAAGCAGTAGAACTTATTA+AGG - chr3_1:81846662-81846681 None:intergenic 30.0%
GAAACACAAATTATTGATGG+GGG - chr3_1:81846819-81846838 None:intergenic 30.0%
GCAACAATTGTCAATTATGT+TGG - chr3_1:81846874-81846893 None:intergenic 30.0%
CATAATTGACAATTGTTGCA+TGG + chr3_1:81846875-81846894 Msa0380170:intron 30.0%
CAAATTACTGCAAAGAAGTT+AGG + chr3_1:81846925-81846944 Msa0380170:CDS 30.0%
GTAGAATTGTAAGTGCATTT+GGG - chr3_1:81847112-81847131 None:intergenic 30.0%
AGTAGAATTGTAAGTGCATT+TGG - chr3_1:81847113-81847132 None:intergenic 30.0%
!! ATGTTAATAACAAAGGCATC+AGG - chr3_1:81847203-81847222 None:intergenic 30.0%
!! GATGCCTTTGTTATTAACAT+AGG + chr3_1:81847203-81847222 Msa0380170:CDS 30.0%
ATCATGACTACTCAAATAAC+TGG - chr3_1:81847306-81847325 None:intergenic 30.0%
ACTAGTTAGTATCAACAAAC+AGG + chr3_1:81847348-81847367 Msa0380170:intron 30.0%
AACAAACTTCGAGTGTAATT+TGG + chr3_1:81847412-81847431 Msa0380170:intron 30.0%
CTCTCTTGGTTAAAATTGAT+AGG - chr3_1:81847548-81847567 None:intergenic 30.0%
CATATTGACACAAAATTTCC+TGG + chr3_1:81847639-81847658 Msa0380170:intron 30.0%
GTTAAAATTACAAACAGTCC+AGG - chr3_1:81847660-81847679 None:intergenic 30.0%
TTTATGTTACACGTGATTTC+AGG + chr3_1:81847684-81847703 Msa0380170:intron 30.0%
!! TTTATAAGAGTGTTTGGCAT+CGG + chr3_1:81847722-81847741 Msa0380170:CDS 30.0%
ATATCAATGCCTCATTATCT+GGG - chr3_1:81847798-81847817 None:intergenic 30.0%
!! AATAGAGTTCTTTGGGGTTA+AGG - chr3_1:81841945-81841964 None:intergenic 35.0%
CCACTCAAAATAGAGTTCTT+TGG - chr3_1:81841953-81841972 None:intergenic 35.0%
!! CCAAAGAACTCTATTTTGAG+TGG + chr3_1:81841950-81841969 Msa0380170:five_prime_UTR 35.0%
AAGACATGGTCTATCAGATT+CGG - chr3_1:81842092-81842111 None:intergenic 35.0%
TGAGAACCCAAATCAATGAT+AGG - chr3_1:81842142-81842161 None:intergenic 35.0%
ATTGGACAGGTAGTTAATCA+TGG + chr3_1:81842666-81842685 Msa0380170:intron 35.0%
TTGGACAGGTAGTTAATCAT+GGG + chr3_1:81842667-81842686 Msa0380170:intron 35.0%
!!! TGATTTTTTCAAGTTGCCAG+TGG + chr3_1:81842731-81842750 Msa0380170:CDS 35.0%
! AACTTCATTTTCTCATCCAC+TGG - chr3_1:81842750-81842769 None:intergenic 35.0%
AAGGATAGCAATGAAGTCTA+AGG - chr3_1:81842857-81842876 None:intergenic 35.0%
TAGACTTCATTGCTATCCTT+TGG + chr3_1:81842857-81842876 Msa0380170:CDS 35.0%
TCTGGCACATAATTATCCAA+AGG - chr3_1:81842876-81842895 None:intergenic 35.0%
TGGATAATTATGTGCCAGAA+TGG + chr3_1:81842877-81842896 Msa0380170:CDS 35.0%
TTGAATGAAGGAGGATTAGA+AGG - chr3_1:81842903-81842922 None:intergenic 35.0%
ATAAAACATGTCACAAGGTG+AGG - chr3_1:81843020-81843039 None:intergenic 35.0%
! GTGATGATGTATTCATCATG+AGG + chr3_1:81843044-81843063 Msa0380170:intron 35.0%
TTCCTTAATCTGTGTGCAAT+TGG - chr3_1:81843520-81843539 None:intergenic 35.0%
CTGGTTAAGCATACCATAAA+AGG + chr3_1:81843688-81843707 Msa0380170:intron 35.0%
! ACTGGTTAAGGGTATGAAAA+AGG - chr3_1:81843798-81843817 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr3_1:81843935-81843954 Msa0380170:intron 35.0%
!!! ACACTCATTTTGAAACGGAA+GGG + chr3_1:81843940-81843959 Msa0380170:intron 35.0%
! ACTGGTTAAGGGTATGAAAA+AGG - chr3_1:81843798-81843817 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+AGG + chr3_1:81844175-81844194 Msa0380170:intron 35.0%
ATATAAAGTTGCTTCCCTCA+GGG + chr3_1:81844259-81844278 Msa0380170:intron 35.0%
GTTCTTAAGCGCACATTTAA+GGG - chr3_1:81844317-81844336 None:intergenic 35.0%
TGTTCTTAAGCGCACATTTA+AGG - chr3_1:81844318-81844337 None:intergenic 35.0%
TGTGCGCTTAAGAACAAATT+AGG + chr3_1:81844322-81844341 Msa0380170:intron 35.0%
! TTTTAAGCAAGTACACCATC+TGG + chr3_1:81844362-81844381 Msa0380170:intron 35.0%
TACTGCTATACTATTCAGCT+CGG + chr3_1:81844684-81844703 Msa0380170:intron 35.0%
TGCATCTAGGAACTTGAAAA+GGG - chr3_1:81844918-81844937 None:intergenic 35.0%
ATGCATCTAGGAACTTGAAA+AGG - chr3_1:81844919-81844938 None:intergenic 35.0%
! TATTAGTTAGGGGTACGTTT+AGG - chr3_1:81844954-81844973 None:intergenic 35.0%
!!! CACACTAAGTTTTGGATTCA+TGG - chr3_1:81845275-81845294 None:intergenic 35.0%
! GATGATGTGATAATGCATAG+AGG + chr3_1:81845456-81845475 Msa0380170:intron 35.0%
! ATAATGCATAGAGGTGTAAG+TGG + chr3_1:81845465-81845484 Msa0380170:intron 35.0%
!!! GATACTTTTTCGGTTTGGTT+CGG - chr3_1:81845511-81845530 None:intergenic 35.0%
!! AACATGGTCGGATACTTTTT+CGG - chr3_1:81845521-81845540 None:intergenic 35.0%
!! AAAAAGTATCCGACCATGTT+TGG + chr3_1:81845521-81845540 Msa0380170:intron 35.0%
!! TAGATCAGTTTAGGTTGGTT+CGG - chr3_1:81845564-81845583 None:intergenic 35.0%
CATACTAGATCAGTTTAGGT+TGG - chr3_1:81845569-81845588 None:intergenic 35.0%
CAACCTAAACTGATCTAGTA+TGG + chr3_1:81845567-81845586 Msa0380170:intron 35.0%
GAACCATACTAGATCAGTTT+AGG - chr3_1:81845573-81845592 None:intergenic 35.0%
! CGGTTCTCGGTTTTTAATAT+TGG + chr3_1:81845592-81845611 Msa0380170:intron 35.0%
CTTAATCATAAGTGTGTGTG+AGG - chr3_1:81845683-81845702 None:intergenic 35.0%
! CAATGAAATCTTCATCGGTT+CGG - chr3_1:81846080-81846099 None:intergenic 35.0%
CGAACCAATGAAATCTTCAT+CGG - chr3_1:81846085-81846104 None:intergenic 35.0%
! CGATGAAGATTTCATTGGTT+CGG + chr3_1:81846083-81846102 Msa0380170:intron 35.0%
TATGCAATAGTGTAACGGTT+CGG - chr3_1:81846138-81846157 None:intergenic 35.0%
!! TCAGTCCAAAAGTGTTGAAA+GGG - chr3_1:81846381-81846400 None:intergenic 35.0%
!! TTCAGTCCAAAAGTGTTGAA+AGG - chr3_1:81846382-81846401 None:intergenic 35.0%
TGCAAAGAAGTTAGGGAATT+GGG + chr3_1:81846933-81846952 Msa0380170:CDS 35.0%
! CATAAGTAAGTTCTGGTTGT+GGG - chr3_1:81847070-81847089 None:intergenic 35.0%
! AACTTACTTATGGATTGCCA+GGG + chr3_1:81847078-81847097 Msa0380170:CDS 35.0%
!! TAACAAAGGCATCAGGAATT+GGG - chr3_1:81847196-81847215 None:intergenic 35.0%
!! ATAACAAAGGCATCAGGAAT+TGG - chr3_1:81847197-81847216 None:intergenic 35.0%
GGAGTTCCACCAAATTTATA+AGG - chr3_1:81847527-81847546 None:intergenic 35.0%
TACATTTCAACACACTCTCT+TGG - chr3_1:81847562-81847581 None:intergenic 35.0%
!! TTATAAGAGTGTTTGGCATC+GGG + chr3_1:81847723-81847742 Msa0380170:CDS 35.0%
CATATCAATGCCTCATTATC+TGG - chr3_1:81847799-81847818 None:intergenic 35.0%
!! CAGAACTTGCTATAGTATTC+TGG - chr3_1:81847880-81847899 None:intergenic 35.0%
CAGAATACTATAGCAAGTTC+TGG + chr3_1:81847878-81847897 Msa0380170:CDS 35.0%
!!! TGAGTGGTTGTCATTTTCCT+TGG + chr3_1:81841966-81841985 Msa0380170:five_prime_UTR 40.0%
AGACATGGTCTATCAGATTC+GGG - chr3_1:81842091-81842110 None:intergenic 40.0%
TGAGAGACTTGAGAAAGACA+TGG - chr3_1:81842106-81842125 None:intergenic 40.0%
ACACAGATTGTGCAGCAAAT+TGG + chr3_1:81842169-81842188 Msa0380170:CDS 40.0%
CTAGACCTGGAAAAAACCAT+AGG - chr3_1:81842209-81842228 None:intergenic 40.0%
! TTGTAATATTGGGCTAGACC+TGG - chr3_1:81842222-81842241 None:intergenic 40.0%
!!! ATTTTAGAACCAGTGGCATC+AGG - chr3_1:81842431-81842450 None:intergenic 40.0%
ACCACTTATGTTACAACCAG+TGG - chr3_1:81842455-81842474 None:intergenic 40.0%
TGGACAGGTAGTTAATCATG+GGG + chr3_1:81842668-81842687 Msa0380170:intron 40.0%
GATAGTCTCATTGTCTTCGT+GGG - chr3_1:81842786-81842805 None:intergenic 40.0%
AGATAGTCTCATTGTCTTCG+TGG - chr3_1:81842787-81842806 None:intergenic 40.0%
TGGACTTACTTGAATGAAGG+AGG - chr3_1:81842912-81842931 None:intergenic 40.0%
! GAGTGGACTTACTTGAATGA+AGG - chr3_1:81842915-81842934 None:intergenic 40.0%
ACGGAGAAAAATGAAGAGAG+TGG - chr3_1:81842932-81842951 None:intergenic 40.0%
TTCAGCCACGTATCTATCAA+CGG + chr3_1:81842961-81842980 Msa0380170:intron 40.0%
! GTTTGAGGTTTATGACAGAG+TGG + chr3_1:81843208-81843227 Msa0380170:intron 40.0%
AGCCAATTGCACACAGATTA+AGG + chr3_1:81843515-81843534 Msa0380170:intron 40.0%
TTATTAAGGGTCCTGCTAAC+CGG + chr3_1:81843652-81843671 Msa0380170:intron 40.0%
!!! GACACTCATTTTGAAACGGA+AGG + chr3_1:81843939-81843958 Msa0380170:intron 40.0%
! AAATGTTAATCGGTGCCCTA+GGG - chr3_1:81844060-81844079 None:intergenic 40.0%
! AAAATGTTAATCGGTGCCCT+AGG - chr3_1:81844061-81844080 None:intergenic 40.0%
GATATAAAGTTGCTTCCCTC+AGG + chr3_1:81844258-81844277 Msa0380170:intron 40.0%
TGCTTATATTAGTGACCGGA+TGG + chr3_1:81844497-81844516 Msa0380170:intron 40.0%
TCTTAACAGAGTACACCATC+CGG - chr3_1:81844515-81844534 None:intergenic 40.0%
CGGAAATATCTAGTGATGTC+AGG - chr3_1:81844549-81844568 None:intergenic 40.0%
GTAAAGGGAAATAGATCCCA+GGG - chr3_1:81844623-81844642 None:intergenic 40.0%
ACGGAGCGAGTACTAAATTT+AGG - chr3_1:81844845-81844864 None:intergenic 40.0%
GCATCTAGGAACTTGAAAAG+GGG - chr3_1:81844917-81844936 None:intergenic 40.0%
AACTTTACATATAGGGACGG+AGG + chr3_1:81845120-81845139 Msa0380170:intron 40.0%
ACTTTACATATAGGGACGGA+GGG + chr3_1:81845121-81845140 Msa0380170:intron 40.0%
! CGTCCATTCACACTAAGTTT+TGG - chr3_1:81845283-81845302 None:intergenic 40.0%
!! GTTTTGAACCGAACCAAACA+TGG - chr3_1:81845537-81845556 None:intergenic 40.0%
!! ATCTAGTATGGTTCGGTTCT+CGG + chr3_1:81845579-81845598 Msa0380170:intron 40.0%
!! AGTTCGGTTCATCGGTTTAT+TGG - chr3_1:81845621-81845640 None:intergenic 40.0%
TTAGCATCAGTTCGGTTCAT+CGG - chr3_1:81845629-81845648 None:intergenic 40.0%
TATCACTAAAATGGGGAGTG+AGG - chr3_1:81845652-81845671 None:intergenic 40.0%
ATCATAAGTGTGTGTGAGGA+GGG - chr3_1:81845679-81845698 None:intergenic 40.0%
AATCATAAGTGTGTGTGAGG+AGG - chr3_1:81845680-81845699 None:intergenic 40.0%
TAAAAAAGAACACTAGCCGC+CGG + chr3_1:81845794-81845813 Msa0380170:intron 40.0%
AAGAACCGAACCAAACTAGT+CGG - chr3_1:81846028-81846047 None:intergenic 40.0%
!! AAATCTTCATCGGTTCGGTT+TGG - chr3_1:81846075-81846094 None:intergenic 40.0%
CGAACCGATGAAGATTTCAT+TGG + chr3_1:81846078-81846097 Msa0380170:intron 40.0%
!! AATAGTGTAACGGTTCGGTT+TGG - chr3_1:81846133-81846152 None:intergenic 40.0%
! GGGGCATCACTACTTAAATT+TGG - chr3_1:81846221-81846240 None:intergenic 40.0%
! ACTACCCCTTTCAACACTTT+TGG + chr3_1:81846373-81846392 Msa0380170:intron 40.0%
!! CAGTCCAAAAGTGTTGAAAG+GGG - chr3_1:81846380-81846399 None:intergenic 40.0%
GTTCGAATCACATTTACGAG+GGG - chr3_1:81846516-81846535 None:intergenic 40.0%
GGTTCGAATCACATTTACGA+GGG - chr3_1:81846517-81846536 None:intergenic 40.0%
AGGTTCGAATCACATTTACG+AGG - chr3_1:81846518-81846537 None:intergenic 40.0%
CTGCAAAGAAGTTAGGGAAT+TGG + chr3_1:81846932-81846951 Msa0380170:CDS 40.0%
GCAAAGAAGTTAGGGAATTG+GGG + chr3_1:81846934-81846953 Msa0380170:CDS 40.0%
AGAGTACATATCAGAGAGCT+TGG + chr3_1:81846968-81846987 Msa0380170:CDS 40.0%
GAGTACATATCAGAGAGCTT+GGG + chr3_1:81846969-81846988 Msa0380170:CDS 40.0%
!!! AGGAATGTTTTAGGGGAACA+AGG + chr3_1:81847011-81847030 Msa0380170:CDS 40.0%
!!! GGAATGTTTTAGGGGAACAA+GGG + chr3_1:81847012-81847031 Msa0380170:CDS 40.0%
! CCATAAGTAAGTTCTGGTTG+TGG - chr3_1:81847071-81847090 None:intergenic 40.0%
CCACAACCAGAACTTACTTA+TGG + chr3_1:81847068-81847087 Msa0380170:CDS 40.0%
GGCAATCCATAAGTAAGTTC+TGG - chr3_1:81847077-81847096 None:intergenic 40.0%
! GAACTTACTTATGGATTGCC+AGG + chr3_1:81847077-81847096 Msa0380170:CDS 40.0%
TAACATAGGTGATCAACTGC+AGG + chr3_1:81847217-81847236 Msa0380170:CDS 40.0%
TCACCTTAAGACACACTTGA+TGG + chr3_1:81847325-81847344 Msa0380170:intron 40.0%
AGTCCATCAAGTGTGTCTTA+AGG - chr3_1:81847331-81847350 None:intergenic 40.0%
!! ACTCGAAGTTTGTTAGAAGC+TGG - chr3_1:81847406-81847425 None:intergenic 40.0%
!! TGATTTCAGGCTTTGAGCAA+CGG + chr3_1:81847697-81847716 Msa0380170:intron 40.0%
!! ACGGGCTTTATAAGAGTGTT+TGG + chr3_1:81847716-81847735 Msa0380170:CDS 40.0%
AATGAAGCCACAGAAAGTCT+TGG - chr3_1:81847769-81847788 None:intergenic 40.0%
ATTTCTCTGCCCAGATAATG+AGG + chr3_1:81847786-81847805 Msa0380170:CDS 40.0%
!! ACTATAGCAAGTTCTGGAGT+AGG + chr3_1:81847884-81847903 Msa0380170:CDS 40.0%
!! CTATAGCAAGTTCTGGAGTA+GGG + chr3_1:81847885-81847904 Msa0380170:CDS 40.0%
CTTGGAGAAAGAACACTGTT+TGG + chr3_1:81847909-81847928 Msa0380170:CDS 40.0%
!! AGTAACCTTTAAGACGCGAT+AGG + chr3_1:81847947-81847966 Msa0380170:exon 40.0%
TTGTACCTATCGCGTCTTAA+AGG - chr3_1:81847955-81847974 None:intergenic 40.0%
! GACACCAAAGTGCTTTCTTC+CGG + chr3_1:81842028-81842047 Msa0380170:CDS 45.0%
!! GATTCCGGAAGAAAGCACTT+TGG - chr3_1:81842035-81842054 None:intergenic 45.0%
TTCGGGTCTGATGTAGCTTT+CGG - chr3_1:81842074-81842093 None:intergenic 45.0%
!!! CAGCTCCTATGGTTTTTTCC+AGG + chr3_1:81842201-81842220 Msa0380170:CDS 45.0%
!!! CAGTGGCATTTTAGAACCAG+TGG - chr3_1:81842438-81842457 None:intergenic 45.0%
!! CACTGGTTCTAAAATGCCAC+TGG + chr3_1:81842436-81842455 Msa0380170:intron 45.0%
! GCCACTGGTTGTAACATAAG+TGG + chr3_1:81842451-81842470 Msa0380170:intron 45.0%
GCGTATAGTGTCTATGAGTC+AGG + chr3_1:81842479-81842498 Msa0380170:intron 45.0%
! ACAAAGAGGAGGTGCACAAT+TGG + chr3_1:81842823-81842842 Msa0380170:CDS 45.0%
CGTGGCTGAAATTAGAGAGA+CGG - chr3_1:81842951-81842970 None:intergenic 45.0%
! CTTGTCCGTTGATAGATACG+TGG - chr3_1:81842969-81842988 None:intergenic 45.0%
AAAAGTTAACCGGTGTCCCA+GGG - chr3_1:81843823-81843842 None:intergenic 45.0%
! AATGTTAATCGGTGCCCTAG+GGG - chr3_1:81844059-81844078 None:intergenic 45.0%
GTGAAGAGCTTACGTCAACA+CGG - chr3_1:81844569-81844588 None:intergenic 45.0%
ATGTCCAGATCTTACTGTCC+TGG + chr3_1:81844596-81844615 Msa0380170:intron 45.0%
TGTCCAGATCTTACTGTCCT+GGG + chr3_1:81844597-81844616 Msa0380170:intron 45.0%
CGTAAAGGGAAATAGATCCC+AGG - chr3_1:81844624-81844643 None:intergenic 45.0%
! GCATAGAGGTGTAAGTGGTT+CGG + chr3_1:81845470-81845489 Msa0380170:intron 45.0%
!! TCGGTTTGGTTCGGTTTCAT+CGG - chr3_1:81845502-81845521 None:intergenic 45.0%
!!! GGTCGGATACTTTTTCGGTT+TGG - chr3_1:81845516-81845535 None:intergenic 45.0%
GTATCCGACCATGTTTGGTT+CGG + chr3_1:81845526-81845545 Msa0380170:intron 45.0%
TGAACCGAACCAAACATGGT+CGG - chr3_1:81845533-81845552 None:intergenic 45.0%
!! CAGTTTAGGTTGGTTCGGTT+CGG - chr3_1:81845559-81845578 None:intergenic 45.0%
GAGTGAGGTTAGCATCAGTT+CGG - chr3_1:81845637-81845656 None:intergenic 45.0%
TAAGGGATAGACGATCCTAG+CGG - chr3_1:81845847-81845866 None:intergenic 45.0%
!! CCAAACTAGTCGGTTTGGAT+CGG - chr3_1:81846018-81846037 None:intergenic 45.0%
!! CCAAACCGACTAGTTTGGTT+CGG + chr3_1:81846020-81846039 Msa0380170:intron 45.0%
!! TTCATCGGTTCGGTTTGGTT+CGG - chr3_1:81846070-81846089 None:intergenic 45.0%
!! TGTAACGGTTCGGTTTGGAT+TGG - chr3_1:81846128-81846147 None:intergenic 45.0%
ACTAAACCTAGCTACGACGA+GGG + chr3_1:81846769-81846788 Msa0380170:intron 45.0%
!! GATTTCAGGCTTTGAGCAAC+GGG + chr3_1:81847698-81847717 Msa0380170:intron 45.0%
TGAGAAGCCAAGACTTTCTG+TGG + chr3_1:81847759-81847778 Msa0380170:CDS 45.0%
!! TCTTCTGTGAGTGGTTTTGC+AGG - chr3_1:81847823-81847842 None:intergenic 45.0%
GCAAAACCACTCACAGAAGA+TGG + chr3_1:81847823-81847842 Msa0380170:CDS 45.0%
!! TTAATATATTGTTAATTAAT+TGG + chr3_1:81842648-81842667 Msa0380170:intron 5.0%
!!! AAATTTTATCATTAATAAAT+GGG - chr3_1:81843846-81843865 None:intergenic 5.0%
!!! TTTTTAGAATATAATATTTT+AGG + chr3_1:81846160-81846179 Msa0380170:intron 5.0%
CTGAAGAACGAGTAGCTTCC+AGG - chr3_1:81841920-81841939 None:intergenic 50.0%
TCGGGTCTGATGTAGCTTTC+GGG - chr3_1:81842073-81842092 None:intergenic 50.0%
! AAGAGGAGGTGCACAATTGG+AGG + chr3_1:81842826-81842845 Msa0380170:CDS 50.0%
! AGAGGAGGTGCACAATTGGA+GGG + chr3_1:81842827-81842846 Msa0380170:CDS 50.0%
GGAGGATTAGAAGGCCATTC+TGG - chr3_1:81842894-81842913 None:intergenic 50.0%
!! GTGTCACTGACTCACTGACT+AGG + chr3_1:81842988-81843007 Msa0380170:intron 50.0%
! CTGACTCACTGACTAGGTCT+AGG + chr3_1:81842994-81843013 Msa0380170:intron 50.0%
AAAGTTAACCGGTGTCCCAG+GGG - chr3_1:81843822-81843841 None:intergenic 50.0%
GAAAAGTTAACCGGTGTCCC+AGG - chr3_1:81843824-81843843 None:intergenic 50.0%
!! CTAGTCGGTTTGGATCGGTT+CGG - chr3_1:81846013-81846032 None:intergenic 50.0%
! CCGATCCAAACCGACTAGTT+TGG + chr3_1:81846015-81846034 Msa0380170:intron 50.0%
CCGAACCAAACTAGTCGGTT+TGG - chr3_1:81846023-81846042 None:intergenic 50.0%
GACTAAACCTAGCTACGACG+AGG + chr3_1:81846768-81846787 Msa0380170:intron 50.0%
! GTAAGTTCTGGTTGTGGGCA+TGG - chr3_1:81847065-81847084 None:intergenic 50.0%
CTCCAAGACCTTCATGTTGC+TGG + chr3_1:81847131-81847150 Msa0380170:CDS 50.0%
! TGCCATCTTTGAGGACCTGT+AGG - chr3_1:81847157-81847176 None:intergenic 50.0%
AGGTCCTCAAAGATGGCAAG+TGG + chr3_1:81847159-81847178 Msa0380170:CDS 50.0%
CAAGCCACTTGCCATCTTTG+AGG - chr3_1:81847166-81847185 None:intergenic 50.0%
ACAGGAACACGCGTAACTGT+TGG + chr3_1:81847366-81847385 Msa0380170:intron 50.0%
GAACACGCGTAACTGTTGGA+GGG + chr3_1:81847370-81847389 Msa0380170:intron 50.0%
CCAGAACCATCTTCTGTGAG+TGG - chr3_1:81847832-81847851 None:intergenic 50.0%
CCACTCACAGAAGATGGTTC+TGG + chr3_1:81847829-81847848 Msa0380170:CDS 50.0%
!! GGTTCTGGAGCTGTATACAG+AGG + chr3_1:81847844-81847863 Msa0380170:CDS 50.0%
!! CAAGTTCTGGAGTAGGGACT+TGG + chr3_1:81847891-81847910 Msa0380170:CDS 50.0%
GGTGAAGCATGCAGCTCCTA+TGG + chr3_1:81842190-81842209 Msa0380170:CDS 55.0%
ACATGCAAGCCTGATGCCAC+TGG + chr3_1:81842419-81842438 Msa0380170:intron 55.0%
ATGCTTAACCAGTGCCCCAG+AGG - chr3_1:81843680-81843699 None:intergenic 55.0%
ATACCCTTAACCAGTGCCCC+TGG + chr3_1:81843803-81843822 Msa0380170:intron 55.0%
TACCCTTAACCAGTGCCCCT+GGG + chr3_1:81843804-81843823 Msa0380170:intron 55.0%
TACCCTTAACCAGTGCCCCT+AGG + chr3_1:81843804-81843823 Msa0380170:intron 55.0%
ACCCTTAACCAGTGCCCCTA+GGG + chr3_1:81844042-81844061 Msa0380170:intron 55.0%
ATCTTACTGTCCTGGGCCCT+GGG + chr3_1:81844604-81844623 Msa0380170:intron 55.0%
!! AACGATGGGTTAGGTGCGAC+CGG - chr3_1:81845816-81845835 None:intergenic 55.0%
! GCGAAGAGGAACGATGGGTT+AGG - chr3_1:81845825-81845844 None:intergenic 55.0%
TAGCGGCGAAGAGGAACGAT+GGG - chr3_1:81845830-81845849 None:intergenic 55.0%
TAGAGACCCTCGTCGTAGCT+AGG - chr3_1:81846778-81846797 None:intergenic 55.0%
! AGTTCTGGTTGTGGGCATGG+TGG - chr3_1:81847062-81847081 None:intergenic 55.0%
GCATTTGGGTCTGTATGCCC+TGG - chr3_1:81847098-81847117 None:intergenic 55.0%
GGCCAGCAACATGAAGGTCT+TGG - chr3_1:81847136-81847155 None:intergenic 55.0%
CCTGTAGGCCAGCAACATGA+AGG - chr3_1:81847142-81847161 None:intergenic 55.0%
! CCTTCATGTTGCTGGCCTAC+AGG + chr3_1:81847139-81847158 Msa0380170:CDS 55.0%
GGCCTACAGGTCCTCAAAGA+TGG + chr3_1:81847152-81847171 Msa0380170:CDS 55.0%
GGAACACGCGTAACTGTTGG+AGG + chr3_1:81847369-81847388 Msa0380170:intron 55.0%
TCCTGCTAACCGGTGCCTCT+GGG + chr3_1:81843662-81843681 Msa0380170:intron 60.0%
!! GTCCCAGGGGCACTGGTTAA+GGG - chr3_1:81843809-81843828 None:intergenic 60.0%
!! TGTCCCAGGGGCACTGGTTA+AGG - chr3_1:81843810-81843829 None:intergenic 60.0%
!! GCCCTAGGGGCACTGGTTAA+GGG - chr3_1:81844046-81844065 None:intergenic 60.0%
!! TGCCCTAGGGGCACTGGTTA+AGG - chr3_1:81844047-81844066 None:intergenic 60.0%
GGGCCCAGGACAGTAAGATC+TGG - chr3_1:81844603-81844622 None:intergenic 60.0%
GATCTTACTGTCCTGGGCCC+TGG + chr3_1:81844603-81844622 Msa0380170:intron 60.0%
GGAAATAGATCCCAGGGCCC+AGG - chr3_1:81844617-81844636 None:intergenic 60.0%
CTAGCGGCGAAGAGGAACGA+TGG - chr3_1:81845831-81845850 None:intergenic 60.0%
CATCGTTCCTCTTCGCCGCT+AGG + chr3_1:81845829-81845848 Msa0380170:intron 60.0%
AGACGATCCTAGCGGCGAAG+AGG - chr3_1:81845839-81845858 None:intergenic 60.0%
AGGGGAACAAGGGCAGCACA+TGG + chr3_1:81847022-81847041 Msa0380170:CDS 60.0%
GTCCTGCTAACCGGTGCCTC+TGG + chr3_1:81843661-81843680 Msa0380170:intron 65.0%
CCTGCTAACCGGTGCCTCTG+GGG + chr3_1:81843663-81843682 Msa0380170:intron 65.0%
! AACCAGTGCCCCAGAGGCAC+CGG - chr3_1:81843674-81843693 None:intergenic 65.0%
AACCAGTGCCCCTGGGACAC+CGG + chr3_1:81843811-81843830 Msa0380170:intron 65.0%
! AATCGGTGCCCTAGGGGCAC+TGG - chr3_1:81844053-81844072 None:intergenic 65.0%
!! GATGGGTTAGGTGCGACCGG+CGG - chr3_1:81845813-81845832 None:intergenic 65.0%
!! CCCCAGAGGCACCGGTTAGC+AGG - chr3_1:81843666-81843685 None:intergenic 70.0%
!! AACCGGTGCCTCTGGGGCAC+TGG + chr3_1:81843669-81843688 Msa0380170:intron 70.0%
! AACCGGTGTCCCAGGGGCAC+TGG - chr3_1:81843816-81843835 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 81841908 81847977 81841908 ID=Msa0380170;Name=Msa0380170
chr3_1 mRNA 81841908 81847977 81841908 ID=Msa0380170-mRNA-1;Parent=Msa0380170;Name=Msa0380170-mRNA-1;_AED=0.01;_eAED=0.01;_QI=117|1|1|1|1|1|4|26|338
chr3_1 exon 81841908 81842222 81841908 ID=Msa0380170-mRNA-1:exon:20804;Parent=Msa0380170-mRNA-1
chr3_1 exon 81842675 81842922 81842675 ID=Msa0380170-mRNA-1:exon:20805;Parent=Msa0380170-mRNA-1
chr3_1 exon 81846914 81847238 81846914 ID=Msa0380170-mRNA-1:exon:20806;Parent=Msa0380170-mRNA-1
chr3_1 exon 81847706 81847977 81847706 ID=Msa0380170-mRNA-1:exon:20807;Parent=Msa0380170-mRNA-1
chr3_1 five_prime_UTR 81841908 81842024 81841908 ID=Msa0380170-mRNA-1:five_prime_utr;Parent=Msa0380170-mRNA-1
chr3_1 CDS 81842025 81842222 81842025 ID=Msa0380170-mRNA-1:cds;Parent=Msa0380170-mRNA-1
chr3_1 CDS 81842675 81842922 81842675 ID=Msa0380170-mRNA-1:cds;Parent=Msa0380170-mRNA-1
chr3_1 CDS 81846914 81847238 81846914 ID=Msa0380170-mRNA-1:cds;Parent=Msa0380170-mRNA-1
chr3_1 CDS 81847706 81847951 81847706 ID=Msa0380170-mRNA-1:cds;Parent=Msa0380170-mRNA-1
chr3_1 three_prime_UTR 81847952 81847977 81847952 ID=Msa0380170-mRNA-1:three_prime_utr;Parent=Msa0380170-mRNA-1
Gene Sequence

>Msa0380170

ATGGACACCAAAGTGCTTTCTTCCGGAATCCATTATTCAAAATTACCCGAAAGCTACATCAGACCCGAATCTGATAGACCATGTCTTTCTCAAGTCTCTCAGTTCGAAAATGTTCCTATCATTGATTTGGGTTCTCACAACAGAACACAGATTGTGCAGCAAATTGGTGAAGCATGCAGCTCCTATGGTTTTTTCCAGGTAGTTAATCATGGGGTGCCTCTAGAAGAATTGAAAAAAACAGCAGAAGTGGCATATGATTTTTTCAAGTTGCCAGTGGATGAGAAAATGAAGTTGTATTCAGACGATCCCACGAAGACAATGAGACTATCTACAAGTTTTAATGTGAACAAAGAGGAGGTGCACAATTGGAGGGACTACCTTAGACTTCATTGCTATCCTTTGGATAATTATGTGCCAGAATGGCCTTCTAATCCTCCTTCATTCAAGGAAACAGTGGCAAATTACTGCAAAGAAGTTAGGGAATTGGGGTTGAGAATAGAAGAGTACATATCAGAGAGCTTGGGCCTAGAAAAAAATTACTTAAGGAATGTTTTAGGGGAACAAGGGCAGCACATGGCAGTGAATTACTATCCACCATGCCCACAACCAGAACTTACTTATGGATTGCCAGGGCATACAGACCCAAATGCACTTACAATTCTACTCCAAGACCTTCATGTTGCTGGCCTACAGGTCCTCAAAGATGGCAAGTGGCTTGCTGTTAACCCAATTCCTGATGCCTTTGTTATTAACATAGGTGATCAACTGCAGGCTTTGAGCAACGGGCTTTATAAGAGTGTTTGGCATCGGGCTATTGTCAATGCTGAGAAGCCAAGACTTTCTGTGGCTTCATTTCTCTGCCCAGATAATGAGGCATTGATATGTCCTGCAAAACCACTCACAGAAGATGGTTCTGGAGCTGTATACAGAGGATTTACATATCCAGAATACTATAGCAAGTTCTGGAGTAGGGACTTGGAGAAAGAACACTGTTTGGAATTTTTCAAGAACAAGTAA
Protein sequence

>Msa0380170

MDTKVLSSGIHYSKLPESYIRPESDRPCLSQVSQFENVPIIDLGSHNRTQIVQQIGEACSSYGFFQVVNHGVPLEELKKTAEVAYDFFKLPVDEKMKLYSDDPTKTMRLSTSFNVNKEEVHNWRDYLRLHCYPLDNYVPEWPSNPPSFKETVANYCKEVRELGLRIEEYISESLGLEKNYLRNVLGEQGQHMAVNYYPPCPQPELTYGLPGHTDPNALTILLQDLHVAGLQVLKDGKWLAVNPIPDAFVINIGDQLQALSNGLYKSVWHRAIVNAEKPRLSVASFLCPDNEALICPAKPLTEDGSGAVYRGFTYPEYYSKFWSRDLEKEHCLEFFKNK*