AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0472330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0472330 MtrunA17_Chr3g0128001 98.220 337 6 0 46 382 1 337 0.0 691
Msa0472330 MtrunA17_Chr8g0345831 57.669 326 133 3 60 381 18 342 2.26e-137 395
Msa0472330 MtrunA17_Chr1g0184161 40.294 340 197 4 46 381 1 338 7.51e-90 274
Msa0472330 MtrunA17_Chr7g0220011 41.916 334 191 3 46 377 1 333 8.29e-86 263
Msa0472330 MtrunA17_Chr7g0220001 41.411 326 188 3 46 369 3 327 1.83e-85 263
Msa0472330 MtrunA17_Chr1g0184151 39.157 332 194 5 53 380 10 337 3.99e-81 252
Msa0472330 MtrunA17_Chr7g0242551 41.745 321 169 6 58 362 24 342 5.76e-80 249
Msa0472330 MtrunA17_Chr1g0184111 37.758 339 206 3 49 383 3 340 1.46e-79 248
Msa0472330 MtrunA17_Chr1g0184101 39.349 338 198 5 49 381 3 338 2.36e-79 247
Msa0472330 MtrunA17_Chr1g0179801 39.244 344 192 6 49 378 29 369 2.44e-78 246
Msa0472330 MtrunA17_Chr1g0184121 37.463 339 207 3 49 383 3 340 2.53e-78 244
Msa0472330 MtrunA17_Chr5g0437181 41.534 313 172 5 60 362 25 336 6.81e-77 241
Msa0472330 MtrunA17_Chr3g0113641 41.768 328 179 6 45 362 12 337 3.34e-76 239
Msa0472330 MtrunA17_Chr7g0265221 39.003 341 186 4 59 378 37 376 6.34e-76 239
Msa0472330 MtrunA17_Chr5g0412671 41.742 333 180 7 60 381 15 344 6.59e-76 238
Msa0472330 MtrunA17_Chr4g0006371 39.820 334 174 6 53 362 20 350 3.89e-75 237
Msa0472330 MtrunA17_Chr5g0412651 40.719 334 182 6 60 381 15 344 1.39e-74 235
Msa0472330 MtrunA17_Chr7g0250511 38.788 330 194 4 58 381 23 350 1.51e-74 235
Msa0472330 MtrunA17_Chr5g0412681 42.258 310 171 7 68 373 18 323 4.31e-73 231
Msa0472330 MtrunA17_Chr5g0426891 36.994 346 204 6 45 381 1 341 4.51e-73 231
Msa0472330 MtrunA17_Chr5g0423191 36.778 329 198 5 59 381 23 347 2.04e-72 229
Msa0472330 MtrunA17_Chr8g0375601 37.423 326 188 7 58 371 20 341 2.29e-72 230
Msa0472330 MtrunA17_Chr5g0423221 37.538 333 197 6 58 383 46 374 4.24e-71 227
Msa0472330 MtrunA17_Chr6g0455481 35.799 338 209 4 46 378 4 338 1.07e-70 225
Msa0472330 MtrunA17_Chr8g0365241 36.677 319 197 3 58 372 32 349 3.88e-70 224
Msa0472330 MtrunA17_Chr5g0421011 36.086 327 203 4 59 381 23 347 6.30e-70 223
Msa0472330 MtrunA17_Chr3g0109041 36.842 342 199 8 49 378 12 348 1.06e-69 223
Msa0472330 MtrunA17_Chr8g0375671 32.628 331 215 3 58 381 27 356 2.35e-69 222
Msa0472330 MtrunA17_Chr5g0420981 36.145 332 204 5 58 383 27 356 3.12e-69 221
Msa0472330 MtrunA17_Chr1g0162191 37.231 325 197 4 50 368 13 336 3.87e-69 221
Msa0472330 MtrunA17_Chr5g0421101 35.671 328 205 4 58 381 22 347 1.43e-68 220
Msa0472330 MtrunA17_Chr3g0125201 41.077 297 149 9 83 364 3 288 8.01e-68 216
Msa0472330 MtrunA17_Chr5g0420951 36.170 329 204 4 58 381 27 354 9.42e-68 218
Msa0472330 MtrunA17_Chr5g0423251 34.242 330 207 5 58 381 22 347 2.13e-67 217
Msa0472330 MtrunA17_Chr2g0314381 33.731 335 216 3 43 372 37 370 2.21e-67 218
Msa0472330 MtrunA17_Chr7g0239821 36.792 318 196 4 59 372 39 355 1.80e-66 215
Msa0472330 MtrunA17_Chr2g0314391 33.435 329 213 3 58 381 45 372 3.69e-66 214
Msa0472330 MtrunA17_Chr5g0423201 33.639 327 214 2 58 381 22 348 4.73e-66 213
Msa0472330 MtrunA17_Chr2g0314401 34.049 326 209 3 58 378 26 350 1.01e-65 213
Msa0472330 MtrunA17_Chr8g0375571 33.333 339 206 4 56 381 18 349 1.99e-65 212
Msa0472330 MtrunA17_Chr8g0371931 37.578 322 188 8 60 372 16 333 3.04e-65 211
Msa0472330 MtrunA17_Chr5g0420941 35.061 328 207 4 58 381 20 345 4.45e-65 211
Msa0472330 MtrunA17_Chr3g0087031 34.650 329 191 6 59 373 34 352 9.65e-64 207
Msa0472330 MtrunA17_Chr5g0421041 34.036 332 207 6 56 381 20 345 2.43e-63 206
Msa0472330 MtrunA17_Chr1g0187821 35.756 344 203 6 50 381 32 369 3.88e-63 206
Msa0472330 MtrunA17_Chr6g0472861 35.817 349 198 11 50 380 31 371 4.68e-63 206
Msa0472330 MtrunA17_Chr8g0371921 37.267 322 189 8 60 372 16 333 6.11e-63 206
Msa0472330 MtrunA17_Chr7g0239111 34.545 330 209 5 59 383 30 357 1.93e-62 204
Msa0472330 MtrunA17_Chr3g0126741 38.562 306 173 8 82 378 58 357 2.11e-62 204
Msa0472330 MtrunA17_Chr3g0102041 36.228 334 200 8 48 372 4 333 4.70e-62 203
Msa0472330 MtrunA17_Chr8g0348081 36.688 308 182 5 83 381 60 363 4.82e-62 203
Msa0472330 MtrunA17_Chr5g0405411 34.835 333 204 9 48 371 4 332 6.05e-62 202
Msa0472330 MtrunA17_Chr8g0336781 36.364 308 184 4 83 381 95 399 1.45e-61 203
Msa0472330 MtrunA17_Chr5g0420901 33.333 330 214 4 58 383 21 348 2.93e-61 201
Msa0472330 MtrunA17_Chr7g0239101 35.093 322 204 4 55 372 26 346 4.78e-61 200
Msa0472330 MtrunA17_Chr3g0114861 40.764 314 177 7 59 366 16 326 6.10e-61 199
Msa0472330 MtrunA17_Chr5g0421091 32.759 348 221 6 47 383 3 348 1.02e-60 199
Msa0472330 MtrunA17_Chr4g0050031 35.258 329 192 11 49 362 24 346 1.16e-60 199
Msa0472330 MtrunA17_Chr2g0311921 36.156 307 185 3 83 381 54 357 1.42e-60 199
Msa0472330 MtrunA17_Chr1g0187811 34.000 350 208 8 50 381 148 492 1.68e-60 202
Msa0472330 MtrunA17_Chr2g0296371 33.133 332 208 7 60 381 28 355 3.14e-60 198
Msa0472330 MtrunA17_Chr8g0336751 37.459 307 180 5 83 381 94 396 4.04e-60 199
Msa0472330 MtrunA17_Chr1g0187831 33.333 351 209 6 50 383 33 375 4.23e-60 199
Msa0472330 MtrunA17_Chr8g0336851 36.039 308 184 5 83 381 60 363 1.19e-59 197
Msa0472330 MtrunA17_Chr8g0375681 38.406 276 162 4 112 383 15 286 1.62e-59 194
Msa0472330 MtrunA17_Chr1g0161041 37.910 335 196 7 53 381 66 394 1.95e-59 197
Msa0472330 MtrunA17_Chr7g0239121 34.375 320 202 6 59 372 26 343 2.60e-59 196
Msa0472330 MtrunA17_Chr8g0375701 34.154 325 204 7 60 378 31 351 4.05e-59 195
Msa0472330 MtrunA17_Chr2g0289341 35.274 292 171 7 80 362 1 283 5.34e-59 194
Msa0472330 MtrunA17_Chr1g0162321 35.015 337 187 8 55 364 42 373 9.20e-59 196
Msa0472330 MtrunA17_Chr1g0162351 34.718 337 188 8 55 364 42 373 1.47e-58 195
Msa0472330 MtrunA17_Chr1g0204181 35.580 371 190 12 37 371 5 362 1.70e-58 194
Msa0472330 MtrunA17_Chr2g0311831 35.505 307 186 5 83 381 68 370 2.01e-58 194
Msa0472330 MtrunA17_Chr5g0423211 33.129 326 210 4 59 378 23 346 2.07e-58 193
Msa0472330 MtrunA17_Chr1g0184241 35.799 338 203 7 50 381 37 366 2.22e-58 194
Msa0472330 MtrunA17_Chr1g0161081 36.982 338 201 7 50 381 40 371 2.63e-58 194
Msa0472330 MtrunA17_Chr4g0045411 35.494 324 178 8 64 364 12 327 3.86e-58 192
Msa0472330 MtrunA17_Chr8g0336761 36.039 308 184 5 83 381 60 363 4.32e-58 193
Msa0472330 MtrunA17_Chr7g0225881 35.447 347 193 9 53 380 34 368 8.04e-58 192
Msa0472330 MtrunA17_Chr6g0474391 35.965 342 180 9 56 371 39 367 8.30e-58 192
Msa0472330 MtrunA17_Chr4g0055591 33.923 339 211 5 50 381 28 360 8.68e-58 192
Msa0472330 MtrunA17_Chr3g0145171 35.811 296 180 6 82 369 51 344 1.31e-57 191
Msa0472330 MtrunA17_Chr8g0354241 34.218 339 201 7 58 381 42 373 1.95e-57 192
Msa0472330 MtrunA17_Chr1g0162361 33.333 333 196 5 60 373 4 329 2.31e-57 190
Msa0472330 MtrunA17_Chr8g0336631 35.599 309 185 5 83 381 60 364 4.65e-57 190
Msa0472330 MtrunA17_Chr1g0161111 36.578 339 203 7 50 382 99 431 6.56e-57 192
Msa0472330 MtrunA17_Chr8g0336861 34.628 309 189 5 83 381 60 365 1.15e-56 189
Msa0472330 MtrunA17_Chr7g0235951 32.070 343 216 6 50 381 36 372 2.52e-56 189
Msa0472330 MtrunA17_Chr8g0354261 33.628 339 203 7 58 381 42 373 7.20e-56 187
Msa0472330 MtrunA17_Chr8g0351101 35.588 340 197 8 47 370 22 355 7.73e-56 187
Msa0472330 MtrunA17_Chr8g0370711 37.627 295 172 5 82 365 51 344 8.65e-56 187
Msa0472330 MtrunA17_Chr3g0093761 35.366 328 202 6 60 381 29 352 1.83e-55 186
Msa0472330 MtrunA17_Chr5g0424201 36.741 313 186 7 58 362 18 326 1.97e-55 185
Msa0472330 MtrunA17_Chr4g0045431 35.988 339 187 9 63 376 7 340 2.02e-55 186
Msa0472330 MtrunA17_Chr2g0311861 36.156 307 164 6 83 381 64 346 5.91e-55 184
Msa0472330 MtrunA17_Chr2g0311681 35.836 293 172 5 82 362 62 350 8.04e-55 184
Msa0472330 MtrunA17_Chr3g0093741 33.134 335 215 5 53 381 22 353 9.64e-55 184
Msa0472330 MtrunA17_Chr7g0232161 37.786 262 158 4 59 316 35 295 1.45e-54 182
Msa0472330 MtrunA17_Chr2g0311741 34.459 296 184 5 82 371 26 317 1.61e-54 182
Msa0472330 MtrunA17_Chr4g0045441 33.628 339 195 8 63 376 7 340 2.00e-54 183
Msa0472330 MtrunA17_Chr5g0398291 36.218 312 176 10 53 347 14 319 2.09e-54 183
Msa0472330 MtrunA17_Chr8g0370721 39.437 284 164 5 78 355 48 329 2.53e-54 183
Msa0472330 MtrunA17_Chr3g0093751 33.537 328 209 5 60 381 29 353 3.44e-54 182
Msa0472330 MtrunA17_Chr2g0311691 34.483 319 191 6 58 362 36 350 3.48e-54 183
Msa0472330 MtrunA17_Chr4g0064781 36.364 275 172 3 83 355 50 323 5.72e-54 182
Msa0472330 MtrunA17_Chr2g0311761 32.803 314 186 4 83 381 68 371 6.84e-54 182
Msa0472330 MtrunA17_Chr4g0045471 35.780 327 179 10 62 362 6 327 9.55e-54 181
Msa0472330 MtrunA17_Chr2g0311711 35.959 292 174 6 82 364 66 353 2.37e-53 181
Msa0472330 MtrunA17_Chr2g0311701 35.099 302 180 5 82 371 68 365 8.37e-53 179
Msa0472330 MtrunA17_Chr5g0420721 36.032 247 156 2 136 381 4 249 9.26e-53 176
Msa0472330 MtrunA17_Chr1g0167911 32.219 329 206 7 50 369 23 343 1.36e-52 178
Msa0472330 MtrunA17_Chr3g0145181 37.262 263 163 2 95 355 67 329 2.01e-52 178
Msa0472330 MtrunA17_Chr7g0239071 35.135 296 187 4 89 383 11 302 3.26e-52 176
Msa0472330 MtrunA17_Chr7g0265351 34.405 311 183 7 81 381 37 336 5.47e-52 176
Msa0472330 MtrunA17_Chr3g0121141 33.447 293 177 7 80 364 1 283 6.19e-52 175
Msa0472330 MtrunA17_Chr5g0424211 34.091 308 188 8 46 341 1 305 3.90e-51 174
Msa0472330 MtrunA17_Chr7g0236011 33.631 336 206 5 58 381 42 372 1.24e-50 174
Msa0472330 MtrunA17_Chr4g0045451 33.129 326 188 8 63 363 7 327 2.09e-50 172
Msa0472330 MtrunA17_Chr1g0191201 33.945 327 175 10 60 361 33 343 3.83e-50 172
Msa0472330 MtrunA17_Chr4g0066121 35.862 290 172 6 83 362 60 345 1.23e-49 171
Msa0472330 MtrunA17_Chr8g0364471 30.702 342 220 6 50 380 36 371 3.58e-49 170
Msa0472330 MtrunA17_Chr5g0439011 33.904 292 173 7 82 362 4 286 5.27e-49 168
Msa0472330 MtrunA17_Chr3g0145201 37.262 263 163 2 95 355 702 964 7.50e-49 177
Msa0472330 MtrunA17_Chr7g0266651 32.081 346 219 8 46 381 22 361 8.38e-49 169
Msa0472330 MtrunA17_Chr7g0239091 34.615 312 179 7 60 362 136 431 3.82e-48 169
Msa0472330 MtrunA17_Chr2g0311631 33.528 343 194 10 59 381 32 360 4.90e-47 164
Msa0472330 MtrunA17_Chr3g0125421 34.365 323 183 10 58 361 14 326 4.97e-46 161
Msa0472330 MtrunA17_Chr8g0335411 31.728 353 215 9 47 381 28 372 8.37e-46 161
Msa0472330 MtrunA17_Chr1g0167951 30.499 341 219 8 50 381 23 354 3.16e-45 159
Msa0472330 MtrunA17_Chr3g0130391 32.676 355 193 13 45 371 33 369 3.95e-45 159
Msa0472330 MtrunA17_Chr2g0332191 33.121 314 193 8 59 362 27 333 4.18e-45 159
Msa0472330 MtrunA17_Chr4g0011311 33.824 272 168 5 58 324 42 306 7.22e-45 157
Msa0472330 MtrunA17_Chr7g0235981 36.131 274 164 5 114 381 58 326 3.24e-44 155
Msa0472330 MtrunA17_Chr7g0247991 32.797 311 194 5 82 381 66 372 6.62e-44 156
Msa0472330 MtrunA17_Chr4g0066991 32.070 343 196 9 50 381 36 352 1.27e-43 155
Msa0472330 MtrunA17_Chr2g0319491 32.107 299 180 8 73 362 21 305 1.54e-43 154
Msa0472330 MtrunA17_Chr8g0384461 30.503 318 205 6 58 363 24 337 3.41e-43 154
Msa0472330 MtrunA17_Chr4g0045461 33.851 322 190 8 63 363 7 326 3.58e-43 154
Msa0472330 MtrunA17_Chr1g0167961 32.881 295 174 7 75 355 61 345 4.06e-43 154
Msa0472330 MtrunA17_Chr2g0314371 31.707 287 166 5 58 317 27 310 9.30e-43 152
Msa0472330 MtrunA17_Chr3g0092531 34.328 268 167 6 97 362 27 287 2.00e-41 148
Msa0472330 MtrunA17_Chr2g0285931 30.818 318 192 10 71 371 16 322 2.38e-41 148
Msa0472330 MtrunA17_Chr3g0114871 33.835 266 161 7 60 318 18 275 7.22e-41 145
Msa0472330 MtrunA17_Chr6g0488511 33.824 272 163 8 83 345 3 266 1.77e-39 142
Msa0472330 MtrunA17_Chr1g0167931 28.875 329 179 7 50 369 23 305 5.78e-39 141
Msa0472330 MtrunA17_Chr2g0313111 30.945 307 189 11 76 371 20 314 1.00e-38 141
Msa0472330 MtrunA17_Chr4g0068891 31.731 312 191 9 83 382 20 321 1.36e-38 140
Msa0472330 MtrunA17_Chr8g0362741 33.080 263 149 5 58 313 42 284 4.34e-38 138
Msa0472330 MtrunA17_Chr1g0170631 39.444 180 105 2 194 371 3 180 6.69e-38 135
Msa0472330 MtrunA17_Chr1g0148771 31.269 323 192 10 57 362 27 336 8.25e-38 139
Msa0472330 MtrunA17_Chr5g0394071 42.169 166 89 2 197 362 5 163 1.91e-37 133
Msa0472330 MtrunA17_Chr8g0384481 32.343 303 170 10 83 363 59 348 2.01e-37 139
Msa0472330 MtrunA17_Chr1g0194321 29.619 341 202 10 61 379 6 330 6.00e-37 137
Msa0472330 MtrunA17_Chr5g0420881 41.379 145 85 0 239 383 1 145 1.23e-35 127
Msa0472330 MtrunA17_Chr3g0105281 28.475 295 187 5 77 365 28 304 6.54e-35 130
Msa0472330 MtrunA17_Chr4g0075471 46.825 126 65 1 239 362 29 154 7.98e-35 125
Msa0472330 MtrunA17_Chr8g0358941 28.704 324 204 10 72 376 13 328 1.05e-34 130
Msa0472330 MtrunA17_Chr3g0126761 42.690 171 94 4 194 362 44 212 1.12e-34 127
Msa0472330 MtrunA17_Chr7g0233661 45.833 144 71 2 219 362 1 137 2.95e-34 124
Msa0472330 MtrunA17_Chr6g0486831 31.186 295 176 10 68 339 7 297 2.93e-32 124
Msa0472330 MtrunA17_Chr1g0158011 33.641 217 135 5 169 381 49 260 1.23e-31 120
Msa0472330 MtrunA17_Chr4g0053251 30.450 289 172 7 79 341 4 289 4.03e-31 120
Msa0472330 MtrunA17_Chr4g0037611 41.611 149 79 3 215 362 12 153 1.89e-30 115
Msa0472330 MtrunA17_Chr8g0336801 39.474 152 88 2 233 381 5 155 2.34e-30 114
Msa0472330 MtrunA17_Chr8g0336871 37.931 174 98 3 207 377 3 169 1.58e-29 112
Msa0472330 MtrunA17_Chr4g0052251 29.545 308 190 11 80 371 26 322 1.92e-29 116
Msa0472330 MtrunA17_Chr8g0348951 28.179 291 192 7 82 362 9 292 6.49e-29 114
Msa0472330 MtrunA17_Chr4g0064771 38.037 163 100 1 195 356 27 189 1.05e-28 111
Msa0472330 MtrunA17_Chr8g0336831 33.333 183 114 2 83 259 60 240 1.37e-27 109
Msa0472330 MtrunA17_Chr8g0364171 47.321 112 58 1 192 303 16 126 2.62e-27 105
Msa0472330 MtrunA17_Chr4g0055911 29.670 273 173 8 82 339 8 276 4.74e-27 109
Msa0472330 MtrunA17_Chr8g0389941 30.132 302 185 12 86 365 37 334 5.59e-27 110
Msa0472330 MtrunA17_Chr1g0170641 35.211 142 85 2 58 194 22 161 7.68e-26 102
Msa0472330 MtrunA17_Chr1g0158021 29.493 217 133 7 81 287 47 253 1.39e-25 104
Msa0472330 MtrunA17_Chr3g0138351 29.022 317 205 9 78 379 3 314 1.64e-25 105
Msa0472330 MtrunA17_Chr2g0293931 34.343 198 117 7 196 382 9 204 1.71e-25 102
Msa0472330 MtrunA17_Chr7g0219991 48.598 107 54 1 195 301 249 354 2.43e-25 105
Msa0472330 MtrunA17_Chr7g0219991 36.601 153 93 3 46 194 1 153 8.02e-25 103
Msa0472330 MtrunA17_Chr4g0004071 26.537 309 193 7 81 370 7 300 2.75e-25 104
Msa0472330 MtrunA17_Chr4g0004061 27.922 308 191 8 83 370 9 305 1.15e-24 102
Msa0472330 MtrunA17_Chr4g0055871 28.520 277 166 10 82 339 8 271 2.95e-24 101
Msa0472330 MtrunA17_Chr1g0184141 37.209 129 79 2 119 246 1 128 4.29e-24 96.3
Msa0472330 MtrunA17_Chr4g0009561 27.215 316 196 9 83 375 7 311 6.72e-24 100
Msa0472330 MtrunA17_Chr8g0375581 48.235 85 44 0 215 299 1 85 3.05e-23 92.8
Msa0472330 MtrunA17_Chr3g0092581 36.478 159 97 4 206 362 3 159 1.10e-22 94.4
Msa0472330 MtrunA17_Chr7g0247741 25.581 301 202 7 74 362 2 292 2.79e-22 96.3
Msa0472330 MtrunA17_Chr5g0407781 25.817 306 210 7 81 381 3 296 5.51e-22 95.1
Msa0472330 MtrunA17_Chr1g0158031 33.871 186 108 5 204 381 1 179 7.24e-22 92.0
Msa0472330 MtrunA17_Chr5g0407731 24.555 281 203 4 83 362 33 305 1.56e-21 94.4
Msa0472330 MtrunA17_Chr4g0009541 25.086 291 205 6 83 362 7 295 4.40e-21 92.8
Msa0472330 MtrunA17_Chr1g0148781 27.124 306 195 10 72 362 9 301 7.53e-20 89.4
Msa0472330 MtrunA17_Chr1g0167921 35.938 128 74 2 183 303 31 157 1.71e-19 85.1
Msa0472330 MtrunA17_Chr2g0319521 34.234 111 72 1 193 303 15 124 9.91e-19 82.0
Msa0472330 MtrunA17_Chr1g0161101 45.045 111 49 4 233 341 400 500 9.04e-18 84.7
Msa0472330 MtrunA17_Chr2g0311611 50.704 71 27 2 239 302 1 70 1.11e-16 73.9
Msa0472330 MtrunA17_Chr7g0235991 31.507 146 90 3 84 223 22 163 1.14e-16 77.8
Msa0472330 MtrunA17_Chr7g0256741 25.475 263 172 5 83 330 10 263 1.29e-15 77.0
Msa0472330 MtrunA17_Chr8g0375641 26.846 149 101 3 58 199 27 174 2.45e-14 70.9
Msa0472330 MtrunA17_Chr8g0375661 28.346 127 84 2 58 178 27 152 5.23e-14 69.7
Msa0472330 MtrunA17_Chr2g0311641 32.624 141 76 4 59 188 32 164 7.54e-14 68.9
Msa0472330 MtrunA17_Chr8g0336791 29.545 132 85 2 83 208 60 189 1.06e-12 66.2
Msa0472330 MtrunA17_Chr2g0293941 32.203 118 70 3 82 199 18 125 2.33e-12 64.7
Msa0472330 MtrunA17_Chr8g0375621 50.980 51 25 0 218 268 4 54 5.30e-12 60.8
Msa0472330 MtrunA17_Chr8g0364161 30.252 119 68 2 82 195 66 174 6.76e-12 63.9
Msa0472330 MtrunA17_Chr5g0420891 28.873 142 93 5 58 194 21 159 1.16e-11 62.8
Msa0472330 MtrunA17_Chr4g0055921 45.161 62 34 0 82 143 8 69 5.19e-11 58.9
Msa0472330 MtrunA17_Chr3g0092571 29.839 124 75 3 83 199 6 124 7.60e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0472330 AT5G24530.1 68.824 340 103 1 46 382 1 340 5.20e-179 501
Msa0472330 AT4G10490.1 53.509 342 150 5 48 381 4 344 4.60e-133 385
Msa0472330 AT4G10500.1 54.762 336 143 5 51 381 14 345 2.29e-132 383
Msa0472330 AT2G36690.2 40.785 331 185 4 58 378 30 359 1.61e-79 249
Msa0472330 AT2G36690.1 40.785 331 185 4 58 378 30 359 1.61e-79 249
Msa0472330 AT3G60290.1 40.181 331 189 5 60 383 27 355 7.59e-77 241
Msa0472330 AT2G44800.1 39.394 330 191 4 59 381 26 353 1.90e-76 241
Msa0472330 AT5G05600.1 40.823 316 174 6 58 362 36 349 1.56e-69 223
Msa0472330 AT2G38240.1 38.141 312 185 5 60 364 23 333 4.35e-69 221
Msa0472330 AT3G11180.1 40.881 318 175 6 56 362 63 378 4.87e-69 223
Msa0472330 AT3G11180.2 40.881 318 175 6 56 362 63 378 5.81e-69 223
Msa0472330 AT1G77330.1 41.781 292 149 7 83 362 3 285 3.12e-68 218
Msa0472330 AT3G21420.1 37.463 339 194 7 58 381 26 361 2.04e-67 218
Msa0472330 AT3G55970.1 39.498 319 175 7 60 362 25 341 1.02e-66 216
Msa0472330 AT5G07480.1 35.276 326 194 5 60 373 24 344 1.69e-66 215
Msa0472330 AT4G16330.2 38.079 302 175 6 82 378 66 360 1.33e-64 210
Msa0472330 AT3G51240.1 36.728 324 192 8 58 372 13 332 1.80e-64 209
Msa0472330 AT4G25310.1 33.898 354 219 6 34 381 8 352 2.95e-64 209
Msa0472330 AT4G25300.1 34.441 331 209 5 58 381 26 355 5.28e-63 206
Msa0472330 AT3G13610.1 35.780 327 201 6 60 381 38 360 7.33e-63 206
Msa0472330 AT1G78550.1 32.743 339 207 5 56 381 25 355 5.08e-62 203
Msa0472330 AT1G17020.1 34.337 332 209 5 58 381 27 357 5.54e-62 203
Msa0472330 AT1G55290.1 35.276 326 201 6 60 379 37 358 4.15e-61 201
Msa0472330 AT1G06620.1 37.864 309 178 5 82 381 61 364 4.76e-61 201
Msa0472330 AT5G08640.2 34.545 330 207 8 50 372 9 336 2.11e-60 198
Msa0472330 AT5G08640.1 34.545 330 207 8 50 372 9 336 2.11e-60 198
Msa0472330 AT2G30830.1 36.364 308 183 5 83 381 54 357 4.35e-60 198
Msa0472330 AT5G43440.1 37.459 307 182 4 82 381 61 364 4.52e-60 198
Msa0472330 AT1G17010.1 33.735 332 211 5 58 381 27 357 1.33e-59 197
Msa0472330 AT5G51810.1 35.799 338 196 10 58 382 40 369 9.57e-59 195
Msa0472330 AT2G30840.1 37.864 309 178 5 83 381 57 361 1.77e-58 194
Msa0472330 AT5G43450.1 37.874 301 177 5 83 377 61 357 7.11e-57 190
Msa0472330 AT4G25420.1 34.139 331 198 8 58 372 38 364 2.86e-56 189
Msa0472330 AT1G04380.1 36.688 308 178 6 83 381 45 344 7.16e-56 187
Msa0472330 AT1G78550.2 34.875 281 167 3 109 381 5 277 2.04e-55 184
Msa0472330 AT5G05600.2 40.856 257 139 6 58 303 36 290 2.92e-55 184
Msa0472330 AT2G30840.3 37.540 309 173 6 83 381 57 355 2.94e-55 186
Msa0472330 AT3G19000.1 34.203 345 191 8 58 373 2 339 1.19e-54 184
Msa0472330 AT1G03410.2 35.417 336 196 10 50 371 23 351 2.85e-54 183
Msa0472330 AT1G03400.1 36.610 295 176 5 82 372 55 342 3.24e-54 183
Msa0472330 AT1G03410.1 35.417 336 196 10 50 371 60 388 7.30e-54 183
Msa0472330 AT1G04350.1 34.174 357 215 11 39 381 9 359 1.23e-53 181
Msa0472330 AT1G12010.1 36.237 287 164 7 84 362 8 283 2.35e-53 179
Msa0472330 AT1G06650.2 32.948 346 212 7 50 381 29 368 3.51e-53 181
Msa0472330 AT1G06640.1 34.006 347 207 9 50 381 29 368 7.67e-53 180
Msa0472330 AT4G22880.1 34.754 305 179 7 60 347 18 319 1.19e-52 179
Msa0472330 AT4G22880.2 34.754 305 179 7 60 347 18 319 1.19e-52 179
Msa0472330 AT4G22880.3 34.754 305 179 7 60 347 18 319 1.19e-52 179
Msa0472330 AT1G62380.1 36.491 285 166 8 84 362 8 283 1.21e-52 178
Msa0472330 AT5G59530.1 35.119 336 201 10 58 381 33 363 1.37e-51 176
Msa0472330 AT4G16330.1 38.645 251 145 4 132 378 9 254 2.30e-51 172
Msa0472330 AT3G19010.1 32.673 303 180 6 81 363 26 324 2.98e-51 175
Msa0472330 AT3G19010.4 32.673 303 180 6 81 363 26 324 2.98e-51 175
Msa0472330 AT5G12270.1 34.018 341 215 6 48 381 21 358 3.49e-51 175
Msa0472330 AT5G54000.2 33.231 325 200 7 49 361 11 330 5.75e-51 174
Msa0472330 AT3G61400.1 35.669 314 182 7 82 379 59 368 9.93e-51 174
Msa0472330 AT1G49390.1 33.540 322 200 7 60 369 19 338 1.56e-50 173
Msa0472330 AT3G12900.1 33.038 339 212 8 50 381 25 355 1.97e-50 173
Msa0472330 AT5G20400.1 34.161 322 198 8 60 369 19 338 2.19e-50 172
Msa0472330 AT5G63590.1 33.916 286 183 5 82 362 13 297 2.65e-50 171
Msa0472330 AT1G06620.2 41.991 231 124 5 78 303 58 283 2.73e-50 171
Msa0472330 AT3G55970.2 37.308 260 145 7 60 303 25 282 4.07e-50 171
Msa0472330 AT1G06645.1 33.141 347 207 8 50 381 42 378 5.44e-50 172
Msa0472330 AT1G60980.1 33.333 360 214 11 43 383 21 373 7.25e-50 172
Msa0472330 AT5G59540.1 35.390 308 184 8 75 372 54 356 1.29e-49 171
Msa0472330 AT3G51240.2 37.751 249 147 7 128 372 4 248 3.50e-49 167
Msa0472330 AT5G07200.1 33.544 316 189 8 45 345 24 333 4.71e-49 170
Msa0472330 AT1G03400.2 33.437 323 176 6 82 372 55 370 1.39e-48 169
Msa0472330 AT1G05010.1 34.545 275 162 7 80 345 1 266 6.42e-48 166
Msa0472330 AT1G15550.1 33.648 318 188 7 59 362 29 337 3.20e-47 165
Msa0472330 AT4G25310.2 30.312 353 205 6 34 381 8 324 4.24e-47 163
Msa0472330 AT5G43440.2 39.912 228 130 3 82 305 61 285 5.62e-47 162
Msa0472330 AT3G19000.2 35.636 275 141 8 58 303 2 269 8.84e-47 161
Msa0472330 AT2G25450.1 35.000 280 172 4 58 331 30 305 3.52e-46 162
Msa0472330 AT5G20550.1 32.573 307 195 6 60 355 19 324 3.65e-46 162
Msa0472330 AT2G30840.2 38.596 228 129 3 83 303 57 280 5.77e-46 160
Msa0472330 AT5G63600.1 31.715 309 193 7 68 365 11 312 6.50e-46 160
Msa0472330 AT4G21200.1 31.959 291 158 5 85 362 50 313 1.10e-45 160
Msa0472330 AT1G49390.2 35.000 260 165 4 113 369 1 259 1.57e-45 157
Msa0472330 AT5G54000.1 34.661 251 161 3 113 361 1 250 3.30e-45 157
Msa0472330 AT5G07480.2 34.322 236 146 3 145 373 2 235 3.71e-45 156
Msa0472330 AT1G06640.2 35.849 265 152 7 50 303 29 286 5.12e-45 158
Msa0472330 AT5G63600.2 31.613 310 193 8 68 365 11 313 2.17e-44 156
Msa0472330 AT5G63595.1 32.090 268 159 6 75 340 17 263 4.55e-44 154
Msa0472330 AT1G44090.1 32.733 333 193 11 52 361 29 353 2.78e-43 155
Msa0472330 AT1G06640.3 35.249 261 151 7 50 299 29 282 3.42e-43 152
Msa0472330 AT1G80340.1 30.154 325 206 7 51 364 18 332 3.96e-43 154
Msa0472330 AT5G43450.2 39.732 224 128 4 83 303 61 280 5.93e-43 151
Msa0472330 AT1G06650.1 34.221 263 157 5 50 302 29 285 1.66e-42 151
Msa0472330 AT1G04380.2 38.865 229 126 5 83 305 45 265 3.81e-42 149
Msa0472330 AT5G51810.2 35.361 263 155 8 58 310 40 297 4.28e-42 149
Msa0472330 AT4G25300.2 37.895 190 117 1 193 381 72 261 1.46e-41 147
Msa0472330 AT3G19010.3 29.373 303 160 7 81 363 26 294 3.10e-41 148
Msa0472330 AT1G78440.1 28.571 329 200 9 71 379 6 319 1.10e-40 147
Msa0472330 AT5G43935.1 31.438 299 169 9 72 362 12 282 2.80e-40 144
Msa0472330 AT3G19010.2 33.607 244 138 6 81 304 26 265 8.26e-40 143
Msa0472330 AT3G61400.2 37.179 234 131 5 82 303 59 288 1.08e-38 140
Msa0472330 AT1G30040.1 31.023 303 185 10 82 371 30 321 1.82e-38 141
Msa0472330 AT1G47990.1 32.288 319 186 12 81 382 13 318 2.07e-38 140
Msa0472330 AT2G19590.1 31.481 270 169 7 83 345 11 271 3.23e-38 139
Msa0472330 AT4G25420.2 32.819 259 157 7 58 303 38 292 3.30e-38 139
Msa0472330 AT5G63580.1 36.522 230 133 6 81 303 17 240 7.65e-38 137
Msa0472330 AT1G02400.1 32.166 314 192 9 82 382 23 328 1.59e-37 138
Msa0472330 AT5G63580.2 36.087 230 134 6 81 303 17 240 2.71e-37 135
Msa0472330 AT1G80330.1 31.429 315 190 10 62 362 31 333 2.97e-36 135
Msa0472330 AT5G59540.2 35.593 236 140 7 75 303 54 284 2.07e-35 131
Msa0472330 AT3G50210.4 31.153 321 185 9 77 362 2 321 2.33e-34 130
Msa0472330 AT3G50210.1 31.153 321 185 9 77 362 2 321 2.33e-34 130
Msa0472330 AT3G50210.3 31.153 321 185 9 77 362 2 321 2.33e-34 130
Msa0472330 AT4G23340.1 32.776 299 183 7 74 362 1 291 8.17e-34 128
Msa0472330 AT2G34555.1 31.164 292 178 10 83 362 27 307 2.42e-33 127
Msa0472330 AT1G50960.1 29.630 297 170 9 83 362 40 314 2.44e-33 127
Msa0472330 AT3G49620.1 29.814 322 195 10 55 347 3 322 8.31e-33 126
Msa0472330 AT2G19590.2 32.083 240 150 6 110 345 26 256 1.97e-32 124
Msa0472330 AT3G49630.1 30.000 290 176 7 94 362 33 316 3.16e-30 119
Msa0472330 AT3G49630.3 30.000 290 176 7 94 362 29 312 3.31e-30 118
Msa0472330 AT1G52820.1 26.578 301 195 6 83 368 12 301 6.00e-27 109
Msa0472330 AT1G30040.2 31.489 235 137 10 82 303 30 253 2.60e-26 106
Msa0472330 AT3G47190.1 26.421 299 186 10 82 365 31 310 9.29e-26 106
Msa0472330 AT4G21690.1 28.571 301 183 10 83 364 47 334 1.03e-25 106
Msa0472330 AT3G46500.5 28.114 281 168 10 82 339 16 285 1.77e-24 102
Msa0472330 AT5G58660.1 26.198 313 184 10 82 365 33 327 2.94e-24 102
Msa0472330 AT4G03070.1 27.532 316 178 11 82 368 13 306 1.29e-23 100
Msa0472330 AT4G23340.2 42.188 128 69 3 239 362 47 173 1.33e-23 97.8
Msa0472330 AT1G35190.1 29.496 278 167 11 86 339 15 287 1.80e-23 100
Msa0472330 AT3G46490.1 28.082 292 171 10 77 339 11 292 2.16e-23 100
Msa0472330 AT1G02400.2 28.400 250 160 7 82 319 23 265 7.34e-23 97.1
Msa0472330 AT3G46500.7 28.000 275 164 10 82 333 16 279 3.23e-22 95.9
Msa0472330 AT3G50210.2 35.979 189 110 4 185 362 51 239 6.48e-22 94.4
Msa0472330 AT3G46490.2 29.091 275 156 10 86 331 20 284 1.26e-21 94.7
Msa0472330 AT1G35190.2 28.623 276 149 11 86 339 15 264 2.26e-21 94.0
Msa0472330 AT3G49630.2 34.783 184 113 4 185 362 61 243 1.87e-20 90.5
Msa0472330 AT1G14130.1 26.562 256 169 7 83 331 9 252 1.92e-20 91.3
Msa0472330 AT5G51310.1 27.852 298 191 10 83 362 5 296 3.49e-20 90.9
Msa0472330 AT1G52820.2 28.205 234 142 6 83 301 12 234 7.89e-19 85.9
Msa0472330 AT1G14120.2 28.125 256 165 6 83 331 8 251 3.13e-18 85.1
Msa0472330 AT1G14120.1 28.125 256 165 6 83 331 8 251 3.13e-18 85.1
Msa0472330 AT1G14120.3 28.125 256 165 6 83 331 8 251 3.13e-18 85.1
Msa0472330 AT1G52800.1 25.817 306 186 8 74 357 1 287 5.99e-16 78.6
Msa0472330 AT1G28030.1 24.172 302 215 8 65 359 3 297 1.55e-15 77.4
Msa0472330 AT4G22870.1 45.946 74 38 1 272 345 2 73 1.47e-14 69.7
Msa0472330 AT4G16770.1 29.302 215 127 5 83 280 22 228 5.57e-14 71.6
Msa0472330 AT2G06960.1 34.028 144 74 5 230 370 21 146 1.15e-13 68.6
Msa0472330 AT3G46500.10 30.909 165 100 7 186 339 50 211 2.70e-13 69.7
Msa0472330 AT3G46500.1 30.909 165 100 7 186 339 50 211 2.70e-13 69.7
Msa0472330 AT3G46480.1 28.704 216 136 7 132 339 40 245 6.37e-13 68.9
Msa0472330 AT4G16765.4 33.099 142 81 5 181 310 45 184 1.81e-12 65.9
Msa0472330 AT3G46500.4 30.464 151 95 5 197 339 1 149 1.94e-12 65.9
Msa0472330 AT4G22870.2 45.455 66 34 1 280 345 51 114 5.14e-12 63.9
Msa0472330 AT1G80320.1 29.252 147 101 3 186 330 118 263 6.07e-12 66.6
Msa0472330 AT3G46500.3 30.818 159 96 7 186 333 50 205 4.84e-11 62.8
Msa0472330 AT4G16765.5 41.573 89 45 3 251 334 75 161 6.52e-11 61.6
Msa0472330 AT1G15540.2 25.806 310 192 11 78 363 7 302 7.16e-11 63.2
Msa0472330 AT1G15540.3 25.806 310 192 11 78 363 11 306 7.47e-11 63.2
Msa0472330 AT1G15540.1 25.806 310 192 11 78 363 4 299 7.70e-11 63.2
Msa0472330 AT1G15540.4 25.806 310 192 11 78 363 4 299 7.70e-11 63.2

Find 106 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATCAATGCCTCATTATC+TGG 0.139085 3_3:-74774292 None:intergenic
TTGTACCTATCGCGTCTTAA+AGG 0.210511 3_3:-74774448 None:intergenic
AAATGTTCCTATCATTGATT+TGG 0.233266 3_3:+74766969 Msa0472330:CDS
GACGCGATAGGTACAAAATA+AGG 0.244314 3_3:+74774455 Msa0472330:three_prime_UTR
CACTCAAAATAGAGTTCTTT+GGG 0.245539 3_3:-74766786 None:intergenic
TGTCCATTATATATAATCTT+TGG 0.248643 3_3:-74766846 None:intergenic
GGAGGATTAGAAGGCCATTC+TGG 0.253793 3_3:-74767717 None:intergenic
TGCAAAGAAGTTAGGGAATT+GGG 0.271569 3_3:+74773429 Msa0472330:CDS
CCACTCAAAATAGAGTTCTT+TGG 0.271876 3_3:-74766787 None:intergenic
GTCCATTATATATAATCTTT+GGG 0.276647 3_3:-74766845 None:intergenic
CACATTTCAGCTCATCTTCC+TGG 0.283902 3_3:+74766736 Msa0472330:CDS
TTCGGGTCTGATGTAGCTTT+CGG 0.284448 3_3:-74766908 None:intergenic
CAAATTACTGCAAAGAAGTT+AGG 0.295260 3_3:+74773421 Msa0472330:CDS
AGTAGAATTGTAAGTGCATT+TGG 0.299499 3_3:-74773606 None:intergenic
AGAAACTGCAAAAGCGAAAA+AGG 0.300365 3_3:-74774608 None:intergenic
TCTTCTGTGAGTGGCTTTGC+AGG 0.306145 3_3:-74774316 None:intergenic
AATAGAGTTCTTTGGGGTTA+AGG 0.308229 3_3:-74766779 None:intergenic
CAGAACTTGCTATAGTATTC+TGG 0.315699 3_3:-74774373 None:intergenic
CTGAAGAACGAGTAGCTTCC+AGG 0.317604 3_3:-74766754 None:intergenic
TCGGGTCTGATGTAGCTTTC+GGG 0.320790 3_3:-74766907 None:intergenic
ATAACAAAGGCATCAGGAAT+TGG 0.331916 3_3:-74773690 None:intergenic
CTGCAAAGAAGTTAGGGAAT+TGG 0.342594 3_3:+74773428 Msa0472330:CDS
AAAATTACACGCTGCTTCAT+AGG 0.344309 3_3:-74774548 None:intergenic
CTCCAAGACCTTCATGTTGC+TGG 0.352908 3_3:+74773627 Msa0472330:CDS
CCACAACCAGAACTTACTTA+TGG 0.355751 3_3:+74773564 Msa0472330:CDS
CAGAATACTATAGCAAGTTC+TGG 0.360326 3_3:+74774374 Msa0472330:CDS
TAGACTTCATTGCTATCCTT+TGG 0.360775 3_3:+74767683 Msa0472330:CDS
GACACCAAAGTGCTTTCTTC+CGG 0.368362 3_3:+74766865 Msa0472330:CDS
ACAAAGAGGAGGTGCATAAT+TGG 0.371306 3_3:+74767649 Msa0472330:CDS
TTGAATGAAGGAGGATTAGA+AGG 0.374736 3_3:-74767726 None:intergenic
ACGGGCTTTATAAGAGTGTT+TGG 0.379683 3_3:+74774212 Msa0472330:CDS
AATGTTCCTATCATTGATTT+GGG 0.394239 3_3:+74766970 Msa0472330:CDS
GATTTCAGGCTTTGAGCAAC+GGG 0.405438 3_3:+74774194 Msa0472330:intron
ACACAGATTGTGCAGCAAAT+TGG 0.405459 3_3:+74767006 Msa0472330:CDS
CCACTCACAGAAGATGGTTC+TGG 0.407257 3_3:+74774325 Msa0472330:CDS
AAGACATGGTCTATCAGATT+CGG 0.410372 3_3:-74766926 None:intergenic
TAACAAAGGCATCAGGAATT+GGG 0.411915 3_3:-74773689 None:intergenic
TTATAAGAGTGTTTGGCATC+GGG 0.412161 3_3:+74774219 Msa0472330:CDS
CCTTCATGTTGCTGGCCTAC+AGG 0.415073 3_3:+74773635 Msa0472330:CDS
CAAGTTCTGGAGTAGGGACT+TGG 0.421418 3_3:+74774387 Msa0472330:CDS
CAAGCCACTTGCCATCTTTG+AGG 0.423051 3_3:-74773659 None:intergenic
AAGGATAGCAATGAAGTCTA+AGG 0.423736 3_3:-74767680 None:intergenic
AGAGTACATATCAGAGAGCT+TGG 0.437678 3_3:+74773464 Msa0472330:CDS
CTTGGACAAAGAACACTGTT+TGG 0.439271 3_3:+74774405 Msa0472330:CDS
ATTGGACAGGTAGTTAATCA+TGG 0.442304 3_3:+74767492 Msa0472330:intron
ACGCGATAGGTACAAAATAA+GGG 0.446257 3_3:+74774456 Msa0472330:three_prime_UTR
GGTGAAGCATGCAGCTCCTA+TGG 0.451140 3_3:+74767027 Msa0472330:CDS
AGACATGGTCTATCAGATTC+GGG 0.453451 3_3:-74766925 None:intergenic
GTAGAATTGTAAGTGCATTT+GGG 0.457750 3_3:-74773605 None:intergenic
GGCAATCCATAAGTAAGTTC+TGG 0.459581 3_3:-74773570 None:intergenic
GGCCAGCAACATGAAGGTCT+TGG 0.463361 3_3:-74773629 None:intergenic
GATGCCTTTGTTATTAACAT+AGG 0.466138 3_3:+74773699 Msa0472330:CDS
TTTATAAGAGTGTTTGGCAT+CGG 0.466507 3_3:+74774218 Msa0472330:CDS
GAACTTACTTATGGATTGCC+AGG 0.466993 3_3:+74773573 Msa0472330:CDS
GAGGATTAGAAGGCCATTCT+GGG 0.472261 3_3:-74767716 None:intergenic
TGAGAACCCAAATCAATGAT+AGG 0.480759 3_3:-74766976 None:intergenic
AAATTACTGCAAAGAAGTTA+GGG 0.494544 3_3:+74773422 Msa0472330:CDS
ATTTCTCTGCCCAGATAATG+AGG 0.499626 3_3:+74774282 Msa0472330:CDS
TTGGACAGGTAGTTAATCAT+GGG 0.500876 3_3:+74767493 Msa0472330:intron
ACTATAGCAAGTTCTGGAGT+AGG 0.502999 3_3:+74774380 Msa0472330:CDS
GCAAAGCCACTCACAGAAGA+TGG 0.506243 3_3:+74774319 Msa0472330:CDS
CATAAGTAAGTTCTGGTTGT+GGG 0.510925 3_3:-74773563 None:intergenic
GGCCTACAGGTCCTCAAAGA+TGG 0.511247 3_3:+74773648 Msa0472330:CDS
GAGTACATATCAGAGAGCTT+GGG 0.519973 3_3:+74773465 Msa0472330:CDS
CTTCATAGGACTCTGAGGAT+TGG 0.524751 3_3:-74774534 None:intergenic
GATAGTCTCATTGTCTTCGT+GGG 0.526905 3_3:-74767609 None:intergenic
ATGTTAATAACAAAGGCATC+AGG 0.527782 3_3:-74773696 None:intergenic
TGGATAATTATGTCCCAGAA+TGG 0.527838 3_3:+74767703 Msa0472330:CDS
CCATAAGTAAGTTCTGGTTG+TGG 0.530829 3_3:-74773564 None:intergenic
TGATTTCAGGCTTTGAGCAA+CGG 0.532892 3_3:+74774193 Msa0472330:intron
ATATCAATGCCTCATTATCT+GGG 0.533372 3_3:-74774291 None:intergenic
AGATAGTCTCATTGTCTTCG+TGG 0.538477 3_3:-74767610 None:intergenic
GTAAGTTCTGGTTGTGGGCA+TGG 0.541546 3_3:-74773558 None:intergenic
TCCATTATATATAATCTTTG+GGG 0.542186 3_3:-74766844 None:intergenic
CTATAGCAAGTTCTGGAGTA+GGG 0.545848 3_3:+74774381 Msa0472330:CDS
GAGTGGACTTACTTGAATGA+AGG 0.551937 3_3:-74767738 None:intergenic
CTGAGGATTGGATAGCAACA+AGG 0.557701 3_3:-74774522 None:intergenic
AATGAAGCCACAGAAAGTCT+TGG 0.563375 3_3:-74774262 None:intergenic
TAACATAGGTGATCAACTGC+AGG 0.578861 3_3:+74773713 Msa0472330:CDS
AAGAGGAGGTGCATAATTGG+AGG 0.579585 3_3:+74767652 Msa0472330:CDS
ATCACCTATGTTAATAACAA+AGG 0.580615 3_3:-74773703 None:intergenic
TGGACTTACTTGAATGAAGG+AGG 0.584641 3_3:-74767735 None:intergenic
TGAGAAGCCAAGACTTTCTG+TGG 0.587303 3_3:+74774255 Msa0472330:CDS
CCAGAACCATCTTCTGTGAG+TGG 0.591824 3_3:-74774325 None:intergenic
GCAAAGAAGTTAGGGAATTG+GGG 0.597696 3_3:+74773430 Msa0472330:CDS
TGCCATCTTTGAGGACCTGT+AGG 0.601133 3_3:-74773650 None:intergenic
CCTGTAGGCCAGCAACATGA+AGG 0.602589 3_3:-74773635 None:intergenic
AACTTACTTATGGATTGCCA+GGG 0.609755 3_3:+74773574 Msa0472330:CDS
GATTCCGGAAGAAAGCACTT+TGG 0.619711 3_3:-74766869 None:intergenic
ACATTTACTAGGCAAATGCA+TGG 0.621604 3_3:-74774636 None:intergenic
AGGGGAACAAGGGCAGCACA+TGG 0.624712 3_3:+74773518 Msa0472330:CDS
GCATTTGGGTCTGTATGCCC+TGG 0.632622 3_3:-74773591 None:intergenic
AGTAACCTTTAAGACGCGAT+AGG 0.638286 3_3:+74774443 Msa0472330:exon
AGAGGAGGTGCATAATTGGA+GGG 0.638458 3_3:+74767653 Msa0472330:CDS
TGTATGTGGCAGGGAAACAG+TGG 0.639663 3_3:+74773398 Msa0472330:intron
CCATTATATATAATCTTTGG+GGG 0.639970 3_3:-74766843 None:intergenic
ACTCAAAATAGAGTTCTTTG+GGG 0.640456 3_3:-74766785 None:intergenic
AGGTCCTCAAAGATGGCAAG+TGG 0.642199 3_3:+74773655 Msa0472330:CDS
AAAATACAAAGAAAGAACCA+AGG 0.643775 3_3:-74766820 None:intergenic
CGCTGCTTCATAGGACTCTG+AGG 0.646261 3_3:-74774539 None:intergenic
TCTGGGACATAATTATCCAA+AGG 0.648305 3_3:-74767699 None:intergenic
TGAGGATTGGATAGCAACAA+GGG 0.655897 3_3:-74774521 None:intergenic
TCAGAGACTTGAGAAAGACA+TGG 0.682588 3_3:-74766940 None:intergenic
GGTTCTGGAGCTGTATACAG+AGG 0.693142 3_3:+74774340 Msa0472330:CDS
AGTTCTGGTTGTGGGCATGG+TGG 0.698132 3_3:-74773555 None:intergenic
TGGACAGGTAGTTAATCATG+GGG 0.699574 3_3:+74767494 Msa0472330:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTTTATTTAT+CGG + chr3_3:74768925-74768944 Msa0472330:intron 0.0%
!! AAAAAAATAATTATAAATAT+AGG - chr3_3:74769217-74769236 None:intergenic 0.0%
!! AAACAAAAAATTGTAATATT+GGG - chr3_3:74767069-74767088 None:intergenic 10.0%
!! TAAACAAAAAATTGTAATAT+TGG - chr3_3:74767070-74767089 None:intergenic 10.0%
!! AAAAATATTTACAAACTTAA+AGG + chr3_3:74768367-74768386 Msa0472330:intron 10.0%
!! TAATACAAACAATATTAATT+AGG - chr3_3:74769649-74769668 None:intergenic 10.0%
!!! AATTTTTACCATTAATAAAT+GGG - chr3_3:74770094-74770113 None:intergenic 10.0%
!!! AAATTTTTACCATTAATAAA+TGG - chr3_3:74770095-74770114 None:intergenic 10.0%
!! TATTCATCAAAAAAAAAAAA+AGG + chr3_3:74771035-74771054 Msa0472330:intron 10.0%
!! TTAAAATATATGCATTATTA+GGG - chr3_3:74772673-74772692 None:intergenic 10.0%
!!! CAAGTTATTTTTATAAACAA+GGG - chr3_3:74767901-74767920 None:intergenic 15.0%
!!! ACAAGTTATTTTTATAAACA+AGG - chr3_3:74767902-74767921 None:intergenic 15.0%
!!! TTAAGTTTGTAAATGTTTTT+AGG + chr3_3:74768092-74768111 Msa0472330:intron 15.0%
!!! TAAGTTTGTAAATGTTTTTA+GGG + chr3_3:74768093-74768112 Msa0472330:intron 15.0%
!!! ATAGAACATAAGTATTTTTA+GGG - chr3_3:74768651-74768670 None:intergenic 15.0%
!!! AATAGAACATAAGTATTTTT+AGG - chr3_3:74768652-74768671 None:intergenic 15.0%
!! TAACAAAAGTTGTTAAAAAA+TGG - chr3_3:74768717-74768736 None:intergenic 15.0%
!! TCAATTTCTTTGTAAAATTA+TGG + chr3_3:74768809-74768828 Msa0472330:intron 15.0%
!! AATGTATATATAGACTAATA+TGG - chr3_3:74769389-74769408 None:intergenic 15.0%
!!! AATTTAACTTATGTCAAAAA+TGG - chr3_3:74769608-74769627 None:intergenic 15.0%
!!! TGACATAAGTTAAATTTTTA+AGG + chr3_3:74769612-74769631 Msa0472330:intron 15.0%
!!! GACATAAGTTAAATTTTTAA+GGG + chr3_3:74769613-74769632 Msa0472330:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr3_3:74770158-74770177 Msa0472330:intron 15.0%
!! AATAAATGGAAAATGTTAAT+CGG - chr3_3:74770319-74770338 None:intergenic 15.0%
!!! TAACATTTTCCATTTATTAA+AGG + chr3_3:74770321-74770340 Msa0472330:intron 15.0%
!!! CAAATTTTACCTTTAATAAA+TGG - chr3_3:74770333-74770352 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr3_3:74770158-74770177 Msa0472330:intron 15.0%
!! ATCTATTAATGTTATATTTG+TGG + chr3_3:74770458-74770477 Msa0472330:intron 15.0%
!! TATAAAGTTGCTATATTTAA+AGG + chr3_3:74770541-74770560 Msa0472330:intron 15.0%
!! ATAAAGTTGCTATATTTAAA+GGG + chr3_3:74770542-74770561 Msa0472330:intron 15.0%
!! AAAAAATAATAAATGCATCT+AGG - chr3_3:74771370-74771389 None:intergenic 15.0%
!! TGAAATAATTAGTAAGTTTA+AGG - chr3_3:74771725-74771744 None:intergenic 15.0%
!! ACAAAAATAAATCCAAAATT+TGG - chr3_3:74771915-74771934 None:intergenic 15.0%
!! TAAAATATATGCATTATTAG+GGG - chr3_3:74772672-74772691 None:intergenic 15.0%
!! CTTAAAATATATGCATTATT+AGG - chr3_3:74772674-74772693 None:intergenic 15.0%
!!! TGGTAATGAAATTAAAAAAA+AGG - chr3_3:74772728-74772747 None:intergenic 15.0%
!! ATTTCAAAAAAGAAAAGAAA+AGG + chr3_3:74773208-74773227 Msa0472330:intron 15.0%
!! ATGAATTAATAAGCAAATTA+AGG + chr3_3:74773343-74773362 Msa0472330:intron 15.0%
!! TTATTTCAAAGAATAATTCT+AGG + chr3_3:74773973-74773992 Msa0472330:intron 15.0%
!! TCCATTATATATAATCTTTG+GGG - chr3_3:74766847-74766866 None:intergenic 20.0%
!! GTCCATTATATATAATCTTT+GGG - chr3_3:74766848-74766867 None:intergenic 20.0%
!! TGTCCATTATATATAATCTT+TGG - chr3_3:74766849-74766868 None:intergenic 20.0%
!!! TAATTTTGAATAATGGATTC+CGG - chr3_3:74766887-74766906 None:intergenic 20.0%
!!! CAATGAAGATTATTTTAGAT+AGG + chr3_3:74767109-74767128 Msa0472330:intron 20.0%
!! CTATTCATTGTAATTAGAAT+AGG + chr3_3:74767150-74767169 Msa0472330:intron 20.0%
!!! ATCCTATTCTCTTTTTTTTT+TGG - chr3_3:74767190-74767209 None:intergenic 20.0%
!! AATTGTATTTAGTAGAAATG+AGG - chr3_3:74767218-74767237 None:intergenic 20.0%
!!! GATAGAATAAAATGTCATTT+TGG + chr3_3:74767348-74767367 Msa0472330:intron 20.0%
!! ATATTGTTAATTAATTGGAC+AGG + chr3_3:74767479-74767498 Msa0472330:intron 20.0%
!! AATAATGCTAAATTACACTA+AGG + chr3_3:74767943-74767962 Msa0472330:intron 20.0%
!!! TGATCATTAGTATGTTATTT+TGG + chr3_3:74767994-74768013 Msa0472330:intron 20.0%
!! AAATGACTACATTAAAAACA+TGG - chr3_3:74768299-74768318 None:intergenic 20.0%
!!! ATCATCGTTTTTGTAATATT+TGG - chr3_3:74768328-74768347 None:intergenic 20.0%
!! TTTATCTCTAAATTACACTA+GGG - chr3_3:74768505-74768524 None:intergenic 20.0%
!! ATTTATCTCTAAATTACACT+AGG - chr3_3:74768506-74768525 None:intergenic 20.0%
!! TTACAAAGAAATTGAGATAT+TGG - chr3_3:74768804-74768823 None:intergenic 20.0%
!!! CTCATAAATTGTTATTCAAA+TGG + chr3_3:74768836-74768855 Msa0472330:intron 20.0%
!!! TTTTTTATTTATCGGTTTAG+TGG + chr3_3:74768933-74768952 Msa0472330:intron 20.0%
!!! TTTTTATTTATCGGTTTAGT+GGG + chr3_3:74768934-74768953 Msa0472330:intron 20.0%
!!! ATTTATCTTTACGTCATTTT+AGG + chr3_3:74768993-74769012 Msa0472330:intron 20.0%
!! AGAATTACTAGTTACTTATT+AGG + chr3_3:74769053-74769072 Msa0472330:intron 20.0%
!! AAAAAAATGTGGAAGTTAAA+GGG - chr3_3:74769087-74769106 None:intergenic 20.0%
!! TAAAAAAATGTGGAAGTTAA+AGG - chr3_3:74769088-74769107 None:intergenic 20.0%
!!! ATTCTTTTCGTAAAAAAGTA+TGG + chr3_3:74769132-74769151 Msa0472330:intron 20.0%
!!! TTCTTTTCGTAAAAAAGTAT+GGG + chr3_3:74769133-74769152 Msa0472330:intron 20.0%
!! ATATATAGACTAATATGGTT+GGG - chr3_3:74769384-74769403 None:intergenic 20.0%
!! TATATATAGACTAATATGGT+TGG - chr3_3:74769385-74769404 None:intergenic 20.0%
!! AAACAAATACTATTGAAGAA+TGG + chr3_3:74769496-74769515 Msa0472330:intron 20.0%
!! AACAAATACTATTGAAGAAT+GGG + chr3_3:74769497-74769516 Msa0472330:intron 20.0%
!! TGAACAAAACCATAAAAAAT+CGG + chr3_3:74769556-74769575 Msa0472330:intron 20.0%
!! TTTGTATTATGTTAAAAGCT+AGG + chr3_3:74769660-74769679 Msa0472330:intron 20.0%
!!! GTCTTTTTCATATAAAACAA+TGG - chr3_3:74769833-74769852 None:intergenic 20.0%
!! AAATTATGTGAGAAAAAAGT+TGG + chr3_3:74769872-74769891 Msa0472330:intron 20.0%
!!! AAAAGTTGGAGTATTTATTA+AGG + chr3_3:74769886-74769905 Msa0472330:intron 20.0%
!!! AAAGTTGGAGTATTTATTAA+GGG + chr3_3:74769887-74769906 Msa0472330:intron 20.0%
!!! TCAAAAACAATTTCCTTTTA+TGG - chr3_3:74769971-74769990 None:intergenic 20.0%
!! TAACATTTCCCATTTATTAA+TGG + chr3_3:74770083-74770102 Msa0472330:intron 20.0%
!!! TAAACATAGAAACTTTTTCT+TGG + chr3_3:74770604-74770623 Msa0472330:intron 20.0%
!! CATTTAAGGGATTTAAATAT+GGG - chr3_3:74770741-74770760 None:intergenic 20.0%
!! ACATTTAAGGGATTTAAATA+TGG - chr3_3:74770742-74770761 None:intergenic 20.0%
!! TAATCACTATAAATAAGGAA+AGG + chr3_3:74771007-74771026 Msa0472330:intron 20.0%
!!! AGCAGTAATACTTTTTTATT+TGG - chr3_3:74771072-74771091 None:intergenic 20.0%
!!! TTTTTTCTTATAATAGTGAC+CGG - chr3_3:74771193-74771212 None:intergenic 20.0%
!!! ATAAGCAAAAATCAACATTT+TGG - chr3_3:74771283-74771302 None:intergenic 20.0%
!! TTTCATATTTCAAGATTAGT+CGG - chr3_3:74771419-74771438 None:intergenic 20.0%
!! TTTAATACACATAGAAACAA+AGG + chr3_3:74771446-74771465 Msa0472330:intron 20.0%
!!! TAAACTAACAACTTTTCTTA+AGG + chr3_3:74771509-74771528 Msa0472330:intron 20.0%
!! AGAGATAATATCACTAAAAT+GGG - chr3_3:74772170-74772189 None:intergenic 20.0%
!! CAGATTAAGTTCAAAATTAA+AGG + chr3_3:74772204-74772223 Msa0472330:intron 20.0%
!!! AATTAAGGAGTATTTTATGT+TGG - chr3_3:74772230-74772249 None:intergenic 20.0%
!! CTAACATGAAAAAACTAATA+AGG - chr3_3:74772375-74772394 None:intergenic 20.0%
!! ATGTGACAATTAAAAATGTA+GGG - chr3_3:74772768-74772787 None:intergenic 20.0%
!! AATGTGACAATTAAAAATGT+AGG - chr3_3:74772769-74772788 None:intergenic 20.0%
!!! TATTTGTTACATGTGTTATT+TGG - chr3_3:74772907-74772926 None:intergenic 20.0%
!! AAAAAAGTTGTGATAAATCA+AGG - chr3_3:74773029-74773048 None:intergenic 20.0%
!!! ATCACAACTTTTTTTTTTGA+AGG + chr3_3:74773035-74773054 Msa0472330:intron 20.0%
!!! TCCTTAAGTAATTTTTTTCT+AGG - chr3_3:74773491-74773510 None:intergenic 20.0%
!!! AATTACTTAAGGAAAGTTTT+AGG + chr3_3:74773498-74773517 Msa0472330:CDS 20.0%
!!! ATTACTTAAGGAAAGTTTTA+GGG + chr3_3:74773499-74773518 Msa0472330:CDS 20.0%
!!! AATACTAATTTTGTGTTGTA+TGG - chr3_3:74773954-74773973 None:intergenic 20.0%
!! ACAAACATTCCTTATAAATT+TGG + chr3_3:74774011-74774030 Msa0472330:intron 20.0%
!! AAAAACAGAAACTTATTTGT+AGG - chr3_3:74774666-74774685 None:intergenic 20.0%
! AAAATACAAAGAAAGAACCA+AGG - chr3_3:74766823-74766842 None:intergenic 25.0%
! CCATTATATATAATCTTTGG+GGG - chr3_3:74766846-74766865 None:intergenic 25.0%
!!! TTTCGGGTAATTTTGAATAA+TGG - chr3_3:74766894-74766913 None:intergenic 25.0%
!! AAATGTTCCTATCATTGATT+TGG + chr3_3:74766969-74766988 Msa0472330:CDS 25.0%
!!! AATGTTCCTATCATTGATTT+GGG + chr3_3:74766970-74766989 Msa0472330:CDS 25.0%
! TAATCTTCATTGTTCATCTA+TGG - chr3_3:74767101-74767120 None:intergenic 25.0%
!!! TCTCTTTTTTTTTTGGAGAA+GGG - chr3_3:74767183-74767202 None:intergenic 25.0%
!!! TTCTCTTTTTTTTTTGGAGA+AGG - chr3_3:74767184-74767203 None:intergenic 25.0%
! CTCCAAAAAAAAAAGAGAAT+AGG + chr3_3:74767185-74767204 Msa0472330:intron 25.0%
! CTATCACTAAAAATTGAACT+GGG - chr3_3:74767333-74767352 None:intergenic 25.0%
! TCTATCACTAAAAATTGAAC+TGG - chr3_3:74767334-74767353 None:intergenic 25.0%
!! ATATTAAACACCGTAAGTTT+TGG + chr3_3:74767443-74767462 Msa0472330:intron 25.0%
!! TATTAAACACCGTAAGTTTT+GGG + chr3_3:74767444-74767463 Msa0472330:intron 25.0%
!!! GTTTTTTTCAATTCTTCTAG+AGG - chr3_3:74767522-74767541 None:intergenic 25.0%
!!! AAGTTTTAATGTGAACAAAG+AGG + chr3_3:74767635-74767654 Msa0472330:CDS 25.0%
!! ACATAAGTTGTTTAAGTTTG+AGG + chr3_3:74768021-74768040 Msa0472330:intron 25.0%
! TAGTGGTCCTTTAAATTATT+TGG + chr3_3:74768053-74768072 Msa0472330:intron 25.0%
! AGTGGTCCTTTAAATTATTT+GGG + chr3_3:74768054-74768073 Msa0472330:intron 25.0%
! ATGTGACCCAAATAATTTAA+AGG - chr3_3:74768063-74768082 None:intergenic 25.0%
! AATAGAATGCACAAAATTTG+AGG - chr3_3:74768176-74768195 None:intergenic 25.0%
! CAACAAAAAGTTACTATGTT+GGG + chr3_3:74768234-74768253 Msa0472330:intron 25.0%
!!! TTGTAACAGATTGGTTATTT+TGG - chr3_3:74768405-74768424 None:intergenic 25.0%
!! ACATAAGTCATTTAAGTTTG+AGG - chr3_3:74768429-74768448 None:intergenic 25.0%
! TTATCTCTAAATTACACTAG+GGG - chr3_3:74768504-74768523 None:intergenic 25.0%
! GACGTAAAGATAAATCAAAA+GGG - chr3_3:74768988-74769007 None:intergenic 25.0%
! TGACGTAAAGATAAATCAAA+AGG - chr3_3:74768989-74769008 None:intergenic 25.0%
!!! TCCACATTTTTTTACCATAA+AGG + chr3_3:74769094-74769113 Msa0472330:intron 25.0%
!!! CCACATTTTTTTACCATAAA+GGG + chr3_3:74769095-74769114 Msa0472330:intron 25.0%
! TACCATAAAGGGAAATTAAA+TGG + chr3_3:74769106-74769125 Msa0472330:intron 25.0%
!!! TCTTTTCGTAAAAAAGTATG+GGG + chr3_3:74769134-74769153 Msa0472330:intron 25.0%
! TATTTCGTATACATATAGCT+AGG - chr3_3:74769161-74769180 None:intergenic 25.0%
!! TAAACGTGAAGAACTAATTT+TGG + chr3_3:74769301-74769320 Msa0472330:intron 25.0%
! ATGGTAATAATTCCCTTATA+TGG - chr3_3:74769952-74769971 None:intergenic 25.0%
! AAGGGAATTATTACCATAAA+AGG + chr3_3:74769955-74769974 Msa0472330:intron 25.0%
!!! TTATATCTTTTTTTCCCTGA+GGG - chr3_3:74770526-74770545 None:intergenic 25.0%
!!! TTTATATCTTTTTTTCCCTG+AGG - chr3_3:74770527-74770546 None:intergenic 25.0%
!!! CATATTAACTTGTGTTCTTA+GGG - chr3_3:74770717-74770736 None:intergenic 25.0%
!!! TCATATTAACTTGTGTTCTT+AGG - chr3_3:74770718-74770737 None:intergenic 25.0%
! TACTCTGTTAAGAAAAAGAT+GGG + chr3_3:74770810-74770829 Msa0472330:intron 25.0%
! GAGACTATTTAAATCGTAAA+GGG - chr3_3:74770926-74770945 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG + chr3_3:74771227-74771246 Msa0472330:intron 25.0%
! CATTCATTTAATGATGTATG+TGG - chr3_3:74771227-74771246 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + chr3_3:74771292-74771311 Msa0472330:intron 25.0%
! AGGAATGTGAAAAAAGTAAA+AGG + chr3_3:74771529-74771548 Msa0472330:intron 25.0%
! GGAATGTGAAAAAAGTAAAA+GGG + chr3_3:74771530-74771549 Msa0472330:intron 25.0%
! GAATGTGAAAAAAGTAAAAG+GGG + chr3_3:74771531-74771550 Msa0472330:intron 25.0%
!!! ATGCTTAAAGAGTATTTCAA+AGG + chr3_3:74771658-74771677 Msa0472330:intron 25.0%
! TTTAAAAATGAAGCGATCAA+GGG - chr3_3:74771822-74771841 None:intergenic 25.0%
! ATTTAAAAATGAAGCGATCA+AGG - chr3_3:74771823-74771842 None:intergenic 25.0%
!!! GACTACATTTTTCTTTTTTG+AGG - chr3_3:74771865-74771884 None:intergenic 25.0%
!! TTTTTCTCTCTACCAAATTT+TGG + chr3_3:74771900-74771919 Msa0472330:intron 25.0%
! GAGATAATATCACTAAAATG+GGG - chr3_3:74772169-74772188 None:intergenic 25.0%
! GAGAGATAATATCACTAAAA+TGG - chr3_3:74772171-74772190 None:intergenic 25.0%
! TGTGACAATTAAAAATGTAG+GGG - chr3_3:74772767-74772786 None:intergenic 25.0%
! TAATTGTTTATAGTTACTCG+TGG + chr3_3:74772799-74772818 Msa0472330:intron 25.0%
!! ATAACGATAGTTTTTCATAG+TGG + chr3_3:74772945-74772964 Msa0472330:intron 25.0%
!!! ACAACTTTTTTTTTTGAAGG+AGG + chr3_3:74773038-74773057 Msa0472330:intron 25.0%
! TGAAACACAAATTATTGATG+GGG - chr3_3:74773316-74773335 None:intergenic 25.0%
! CTGAAACACAAATTATTGAT+GGG - chr3_3:74773317-74773336 None:intergenic 25.0%
! ACTGAAACACAAATTATTGA+TGG - chr3_3:74773318-74773337 None:intergenic 25.0%
! AAATTACTGCAAAGAAGTTA+GGG + chr3_3:74773422-74773441 Msa0472330:CDS 25.0%
! GCCTAGAAAAAAATTACTTA+AGG + chr3_3:74773487-74773506 Msa0472330:CDS 25.0%
!!! TTACTTAAGGAAAGTTTTAG+GGG + chr3_3:74773500-74773519 Msa0472330:CDS 25.0%
! ATCACCTATGTTAATAACAA+AGG - chr3_3:74773706-74773725 None:intergenic 25.0%
! ATCATGACTAATCAAATAAC+TGG - chr3_3:74773802-74773821 None:intergenic 25.0%
! TTTGGTTGACATAAATTGTT+TGG + chr3_3:74773926-74773945 Msa0472330:intron 25.0%
! AACATTCCTTATAAATTTGG+TGG + chr3_3:74774014-74774033 Msa0472330:intron 25.0%
! TATAGAAAAAGAGTAATGCT+AGG - chr3_3:74774099-74774118 None:intergenic 25.0%
! TTTATGTTACACATGATTTC+AGG + chr3_3:74774180-74774199 Msa0472330:intron 25.0%
! AAAATAAGGGTGAAAAATGA+GGG + chr3_3:74774469-74774488 Msa0472330:three_prime_UTR 25.0%
! TTGTAGGAAAAACATTTACT+AGG - chr3_3:74774650-74774669 None:intergenic 25.0%
!! GAATCTCGATGTATTTTATA+CGG + chr3_3:74774712-74774731 Msa0472330:three_prime_UTR 25.0%
ACTCAAAATAGAGTTCTTTG+GGG - chr3_3:74766788-74766807 None:intergenic 30.0%
CACTCAAAATAGAGTTCTTT+GGG - chr3_3:74766789-74766808 None:intergenic 30.0%
CCCCCAAAGATTATATATAA+TGG + chr3_3:74766843-74766862 Msa0472330:CDS 30.0%
! AATTAGTCTCCCAAAACTTA+CGG - chr3_3:74767456-74767475 None:intergenic 30.0%
ATTGAAAAAAACAGCAGAAG+TGG + chr3_3:74767530-74767549 Msa0472330:CDS 30.0%
! TTTTAATGTGAACAAAGAGG+AGG + chr3_3:74767638-74767657 Msa0472330:CDS 30.0%
CAAGTATAAAACATGTCACA+AGG - chr3_3:74767851-74767870 None:intergenic 30.0%
TTTCTTATCTTGTGCTCTAA+GGG - chr3_3:74768134-74768153 None:intergenic 30.0%
! CCAACATAGTAACTTTTTGT+TGG - chr3_3:74768236-74768255 None:intergenic 30.0%
CCAACAAAAAGTTACTATGT+TGG + chr3_3:74768233-74768252 Msa0472330:intron 30.0%
GCTGCAAATCTCAAATTTAA+AGG + chr3_3:74768477-74768496 Msa0472330:intron 30.0%
CCCTTTATGGTAAAAAAATG+TGG - chr3_3:74769098-74769117 None:intergenic 30.0%
! TGCCATTTAATTTCCCTTTA+TGG - chr3_3:74769111-74769130 None:intergenic 30.0%
TAGATAAAAGAGATACCGTT+AGG + chr3_3:74769179-74769198 Msa0472330:intron 30.0%
!!! GGTTTTGTTTAAATGATCGT+TGG - chr3_3:74769587-74769606 None:intergenic 30.0%
GACATTCATTTAGAAACAGA+GGG - chr3_3:74769738-74769757 None:intergenic 30.0%
TTTCTTAATCTGTGTGCAAT+TGG - chr3_3:74769768-74769787 None:intergenic 30.0%
TGGTTAAGCATACCATATAA+GGG + chr3_3:74769937-74769956 Msa0472330:intron 30.0%
!!! ACACTCATTTTGAAACGAAA+GGG + chr3_3:74770189-74770208 Msa0472330:intron 30.0%
! AATGGTTAAGGGTATGAAAA+AGG - chr3_3:74770284-74770303 None:intergenic 30.0%
!! AAATGTTAACTTGTGCCTTT+GGG + chr3_3:74770565-74770584 Msa0472330:intron 30.0%
TTTATAAACTTGTAGCCCAA+AGG - chr3_3:74770583-74770602 None:intergenic 30.0%
! AGAGTACTCGCTTAAAATTA+GGG - chr3_3:74770796-74770815 None:intergenic 30.0%
GTACTCTGTTAAGAAAAAGA+TGG + chr3_3:74770809-74770828 Msa0472330:intron 30.0%
CGAGACTATTTAAATCGTAA+AGG - chr3_3:74770927-74770946 None:intergenic 30.0%
ACACTTTACTGCTATACTAT+TGG + chr3_3:74770977-74770996 Msa0472330:intron 30.0%
CACTTTACTGCTATACTATT+GGG + chr3_3:74770978-74770997 Msa0472330:intron 30.0%
TCGGCTAATCACTATAAATA+AGG + chr3_3:74771002-74771021 Msa0472330:intron 30.0%
GATGTAGGTGTTTACATATA+GGG - chr3_3:74771168-74771187 None:intergenic 30.0%
! TTTTAGTCAAATACATCCTC+CGG - chr3_3:74771314-74771333 None:intergenic 30.0%
TTAGTCGGTAGTATTAGTTA+CGG - chr3_3:74771404-74771423 None:intergenic 30.0%
CATAGAAACAAAGGACAATT+TGG + chr3_3:74771455-74771474 Msa0472330:intron 30.0%
GTAAAAGGGGTTTACATATA+CGG + chr3_3:74771544-74771563 Msa0472330:intron 30.0%
AATCCAAAACTTAGTGTGAA+TGG + chr3_3:74771787-74771806 Msa0472330:intron 30.0%
TAAACTGATCTAGTATGGTT+CGG + chr3_3:74772082-74772101 Msa0472330:intron 30.0%
! GGTTCTCGGTTTTTAATATT+GGG + chr3_3:74772103-74772122 Msa0472330:intron 30.0%
TGATGAGAGAAAGTGAATTA+AGG - chr3_3:74772245-74772264 None:intergenic 30.0%
TAATCTCATATCATCACTCA+AGG + chr3_3:74772265-74772284 Msa0472330:intron 30.0%
! AGTTTGAAACACAGAGAATA+TGG + chr3_3:74772406-74772425 Msa0472330:intron 30.0%
!! TCAGTTCAAAAGTGTTGAAA+GGG - chr3_3:74772874-74772893 None:intergenic 30.0%
!! TTCAGTTCAAAAGTGTTGAA+AGG - chr3_3:74772875-74772894 None:intergenic 30.0%
GTACGTAACTAACTTAAGAA+AGG - chr3_3:74773111-74773130 None:intergenic 30.0%
TGAAGCAGTAGAACTTATTA+AGG - chr3_3:74773159-74773178 None:intergenic 30.0%
GAAACACAAATTATTGATGG+GGG - chr3_3:74773315-74773334 None:intergenic 30.0%
GCAACAATTGTCAATTATGT+TGG - chr3_3:74773370-74773389 None:intergenic 30.0%
CATAATTGACAATTGTTGCA+TGG + chr3_3:74773371-74773390 Msa0472330:intron 30.0%
CAAATTACTGCAAAGAAGTT+AGG + chr3_3:74773421-74773440 Msa0472330:CDS 30.0%
GTAGAATTGTAAGTGCATTT+GGG - chr3_3:74773608-74773627 None:intergenic 30.0%
AGTAGAATTGTAAGTGCATT+TGG - chr3_3:74773609-74773628 None:intergenic 30.0%
!! ATGTTAATAACAAAGGCATC+AGG - chr3_3:74773699-74773718 None:intergenic 30.0%
!! GATGCCTTTGTTATTAACAT+AGG + chr3_3:74773699-74773718 Msa0472330:CDS 30.0%
ACTAGTTAGTATCAACAAAC+AGG + chr3_3:74773844-74773863 Msa0472330:intron 30.0%
AACAAACTTCGAGTGTAATT+TGG + chr3_3:74773908-74773927 Msa0472330:intron 30.0%
CTCTCTTGGTTAAAATTGAT+AGG - chr3_3:74774044-74774063 None:intergenic 30.0%
CATATTGACACAAAATTTCC+TGG + chr3_3:74774135-74774154 Msa0472330:intron 30.0%
GTTAAAATTACAAACAGTCC+AGG - chr3_3:74774156-74774175 None:intergenic 30.0%
!! TTTATAAGAGTGTTTGGCAT+CGG + chr3_3:74774218-74774237 Msa0472330:CDS 30.0%
ATATCAATGCCTCATTATCT+GGG - chr3_3:74774294-74774313 None:intergenic 30.0%
CAAAATAAGGGTGAAAAATG+AGG + chr3_3:74774468-74774487 Msa0472330:three_prime_UTR 30.0%
!! AATAGAGTTCTTTGGGGTTA+AGG - chr3_3:74766782-74766801 None:intergenic 35.0%
CCACTCAAAATAGAGTTCTT+TGG - chr3_3:74766790-74766809 None:intergenic 35.0%
!! CCAAAGAACTCTATTTTGAG+TGG + chr3_3:74766787-74766806 Msa0472330:CDS 35.0%
AAGACATGGTCTATCAGATT+CGG - chr3_3:74766929-74766948 None:intergenic 35.0%
TGAGAACCCAAATCAATGAT+AGG - chr3_3:74766979-74766998 None:intergenic 35.0%
TAAAAATTGAACTGGGTTCC+TGG - chr3_3:74767326-74767345 None:intergenic 35.0%
ATTGGACAGGTAGTTAATCA+TGG + chr3_3:74767492-74767511 Msa0472330:intron 35.0%
TTGGACAGGTAGTTAATCAT+GGG + chr3_3:74767493-74767512 Msa0472330:intron 35.0%
!!! TGATTTTTTCAAGTTGCCAG+TGG + chr3_3:74767557-74767576 Msa0472330:CDS 35.0%
! AACTTCATTTTCTCATCCAC+TGG - chr3_3:74767576-74767595 None:intergenic 35.0%
AAGGATAGCAATGAAGTCTA+AGG - chr3_3:74767683-74767702 None:intergenic 35.0%
TAGACTTCATTGCTATCCTT+TGG + chr3_3:74767683-74767702 Msa0472330:CDS 35.0%
! TCTGGGACATAATTATCCAA+AGG - chr3_3:74767702-74767721 None:intergenic 35.0%
TGGATAATTATGTCCCAGAA+TGG + chr3_3:74767703-74767722 Msa0472330:CDS 35.0%
TTGAATGAAGGAGGATTAGA+AGG - chr3_3:74767729-74767748 None:intergenic 35.0%
ATAAAACATGTCACAAGGTG+AGG - chr3_3:74767846-74767865 None:intergenic 35.0%
! GTGATGATGTATTCATCATG+AGG + chr3_3:74767870-74767889 Msa0472330:intron 35.0%
! GTTTGAGGTTTATGACATAG+TGG + chr3_3:74768036-74768055 Msa0472330:intron 35.0%
GTTTCTTATCTTGTGCTCTA+AGG - chr3_3:74768135-74768154 None:intergenic 35.0%
TTCCTTATCTTGTGCCTTAA+GGG + chr3_3:74768257-74768276 Msa0472330:intron 35.0%
!! AATGTTAACTTGTGCCCTTA+AGG - chr3_3:74768274-74768293 None:intergenic 35.0%
! GTTTGAGGTTTGTAACAGAT+TGG - chr3_3:74768414-74768433 None:intergenic 35.0%
!!! GGTTTTGTTCAAATGATCGT+TGG - chr3_3:74769547-74769566 None:intergenic 35.0%
!!! TTGGTGTCACCGATTTTTTA+TGG - chr3_3:74769568-74769587 None:intergenic 35.0%
AAAGTAGCGAAGCAATAAGA+AGG - chr3_3:74769699-74769718 None:intergenic 35.0%
CGACATTCATTTAGAAACAG+AGG - chr3_3:74769739-74769758 None:intergenic 35.0%
TTATTAAGGGTCATGCTAAC+CGG + chr3_3:74769900-74769919 Msa0472330:intron 35.0%
CTGGTTAAGCATACCATATA+AGG + chr3_3:74769936-74769955 Msa0472330:intron 35.0%
! ACTGGTTAAGGGTATGAAAA+AGG - chr3_3:74770046-74770065 None:intergenic 35.0%
!!! GACACTCATTTTGAAACGAA+AGG + chr3_3:74770188-74770207 Msa0472330:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr3_3:74770184-74770203 Msa0472330:intron 35.0%
!!! ACACTCATTTTGAAACGGAA+GGG + chr3_3:74770426-74770445 Msa0472330:intron 35.0%
ATATAAAGTTGCTTCCCTCA+GGG + chr3_3:74770509-74770528 Msa0472330:intron 35.0%
!! GAAATGTTAACTTGTGCCTT+TGG + chr3_3:74770564-74770583 Msa0472330:intron 35.0%
GTTCTTAAGCGCACATTTAA+GGG - chr3_3:74770754-74770773 None:intergenic 35.0%
TGTTCTTAAGCGCACATTTA+AGG - chr3_3:74770755-74770774 None:intergenic 35.0%
TGTGCGCTTAAGAACAAATT+AGG + chr3_3:74770759-74770778 Msa0472330:intron 35.0%
! CAGAGTACTCGCTTAAAATT+AGG - chr3_3:74770797-74770816 None:intergenic 35.0%
TAGGTGTTTACATATAGGGA+CGG - chr3_3:74771164-74771183 None:intergenic 35.0%
GGATGTAGGTGTTTACATAT+AGG - chr3_3:74771169-74771188 None:intergenic 35.0%
TTTCTTATAATAGTGACCGG+AGG - chr3_3:74771190-74771209 None:intergenic 35.0%
TGCATCTAGGAACTTGAAAA+GGG - chr3_3:74771357-74771376 None:intergenic 35.0%
ATGCATCTAGGAACTTGAAA+AGG - chr3_3:74771358-74771377 None:intergenic 35.0%
TATTAGTTACGGGTACGTTT+AGG - chr3_3:74771393-74771412 None:intergenic 35.0%
TAGTCGGTAGTATTAGTTAC+GGG - chr3_3:74771403-74771422 None:intergenic 35.0%
!!! CACACTAAGTTTTGGATTCA+TGG - chr3_3:74771785-74771804 None:intergenic 35.0%
! TGTCCATTCACACTAAGTTT+TGG - chr3_3:74771793-74771812 None:intergenic 35.0%
! GATGATGTGATAATGCATAG+AGG + chr3_3:74771966-74771985 Msa0472330:intron 35.0%
! ATAATGCATAGAGGTGTAAG+TGG + chr3_3:74771975-74771994 Msa0472330:intron 35.0%
!!! GATACTTTTTCGGTTTGGTT+CGG - chr3_3:74772021-74772040 None:intergenic 35.0%
!! AACATGGTCGGATACTTTTT+CGG - chr3_3:74772031-74772050 None:intergenic 35.0%
!! AAAAAGTATCCGACCATGTT+TGG + chr3_3:74772031-74772050 Msa0472330:intron 35.0%
!! TAGATCAGTTTAGGTTGGTT+CGG - chr3_3:74772074-74772093 None:intergenic 35.0%
CATACTAGATCAGTTTAGGT+TGG - chr3_3:74772079-74772098 None:intergenic 35.0%
CAACCTAAACTGATCTAGTA+TGG + chr3_3:74772077-74772096 Msa0472330:intron 35.0%
GAACCATACTAGATCAGTTT+AGG - chr3_3:74772083-74772102 None:intergenic 35.0%
! CGGTTCTCGGTTTTTAATAT+TGG + chr3_3:74772102-74772121 Msa0472330:intron 35.0%
ATATCACTAAAATGGGGAGT+GGG - chr3_3:74772163-74772182 None:intergenic 35.0%
AATATCACTAAAATGGGGAG+TGG - chr3_3:74772164-74772183 None:intergenic 35.0%
! CTTAATCTGAAGTATGTGTG+AGG - chr3_3:74772193-74772212 None:intergenic 35.0%
! CAATGAAATCTTCATCGGTT+CGG - chr3_3:74772601-74772620 None:intergenic 35.0%
CGAACCAATGAAATCTTCAT+CGG - chr3_3:74772606-74772625 None:intergenic 35.0%
! CGATGAAGATTTCATTGGTT+CGG + chr3_3:74772604-74772623 Msa0472330:intron 35.0%
! ATGCATTATTAGGGGTGTAA+CGG - chr3_3:74772664-74772683 None:intergenic 35.0%
! GGGGCATCAATACTTAAATT+TGG - chr3_3:74772748-74772767 None:intergenic 35.0%
TGTTGCATGGTAATTGTATG+TGG + chr3_3:74773384-74773403 Msa0472330:intron 35.0%
TGCAAAGAAGTTAGGGAATT+GGG + chr3_3:74773429-74773448 Msa0472330:CDS 35.0%
! CATAAGTAAGTTCTGGTTGT+GGG - chr3_3:74773566-74773585 None:intergenic 35.0%
! AACTTACTTATGGATTGCCA+GGG + chr3_3:74773574-74773593 Msa0472330:CDS 35.0%
!! TAACAAAGGCATCAGGAATT+GGG - chr3_3:74773692-74773711 None:intergenic 35.0%
!! ATAACAAAGGCATCAGGAAT+TGG - chr3_3:74773693-74773712 None:intergenic 35.0%
GGAGTTCCACCAAATTTATA+AGG - chr3_3:74774023-74774042 None:intergenic 35.0%
!! TTATAAGAGTGTTTGGCATC+GGG + chr3_3:74774219-74774238 Msa0472330:CDS 35.0%
CATATCAATGCCTCATTATC+TGG - chr3_3:74774295-74774314 None:intergenic 35.0%
!! CAGAACTTGCTATAGTATTC+TGG - chr3_3:74774376-74774395 None:intergenic 35.0%
CAGAATACTATAGCAAGTTC+TGG + chr3_3:74774374-74774393 Msa0472330:CDS 35.0%
ACGCGATAGGTACAAAATAA+GGG + chr3_3:74774456-74774475 Msa0472330:three_prime_UTR 35.0%
AAAATTACACGCTGCTTCAT+AGG - chr3_3:74774551-74774570 None:intergenic 35.0%
AGAAACTGCAAAAGCGAAAA+AGG - chr3_3:74774611-74774630 None:intergenic 35.0%
ACATTTACTAGGCAAATGCA+TGG - chr3_3:74774639-74774658 None:intergenic 35.0%
! CGATGTATTTTATACGGTGT+CGG + chr3_3:74774718-74774737 Msa0472330:three_prime_UTR 35.0%
! GATGTATTTTATACGGTGTC+GGG + chr3_3:74774719-74774738 Msa0472330:three_prime_UTR 35.0%
!! ATGTATTTTATACGGTGTCG+GGG + chr3_3:74774720-74774739 Msa0472330:three_prime_UTR 35.0%
!!! TGAGTGGTTGTCATTTTCCT+TGG + chr3_3:74766803-74766822 Msa0472330:CDS 40.0%
AGACATGGTCTATCAGATTC+GGG - chr3_3:74766928-74766947 None:intergenic 40.0%
TCAGAGACTTGAGAAAGACA+TGG - chr3_3:74766943-74766962 None:intergenic 40.0%
ACACAGATTGTGCAGCAAAT+TGG + chr3_3:74767006-74767025 Msa0472330:CDS 40.0%
CTAGACCTGGAAAAAACCAT+AGG - chr3_3:74767046-74767065 None:intergenic 40.0%
! TTGTAATATTGGGCTAGACC+TGG - chr3_3:74767059-74767078 None:intergenic 40.0%
!!! ATTTTAGAACCAGTGGCATC+AGG - chr3_3:74767259-74767278 None:intergenic 40.0%
ACCACTTATGTTACAACCAG+TGG - chr3_3:74767283-74767302 None:intergenic 40.0%
TGGACAGGTAGTTAATCATG+GGG + chr3_3:74767494-74767513 Msa0472330:intron 40.0%
GATAGTCTCATTGTCTTCGT+GGG - chr3_3:74767612-74767631 None:intergenic 40.0%
AGATAGTCTCATTGTCTTCG+TGG - chr3_3:74767613-74767632 None:intergenic 40.0%
! ACAAAGAGGAGGTGCATAAT+TGG + chr3_3:74767649-74767668 Msa0472330:CDS 40.0%
TGGACTTACTTGAATGAAGG+AGG - chr3_3:74767738-74767757 None:intergenic 40.0%
! GAGTGGACTTACTTGAATGA+AGG - chr3_3:74767741-74767760 None:intergenic 40.0%
ACGGAGAAAAATGAAGAGAG+TGG - chr3_3:74767758-74767777 None:intergenic 40.0%
TTCAGCCACGTATCTATCAA+CGG + chr3_3:74767787-74767806 Msa0472330:intron 40.0%
GTTCCTTATCTTGTGCCTTA+AGG + chr3_3:74768256-74768275 Msa0472330:intron 40.0%
AGGAGCTGAAAATGACCTAA+CGG - chr3_3:74769197-74769216 None:intergenic 40.0%
TCTTCACGTTTAACGTCTTC+TGG - chr3_3:74769293-74769312 None:intergenic 40.0%
GTTCAAATGATCGTTGGTGT+TGG - chr3_3:74769541-74769560 None:intergenic 40.0%
! AAATGTTAATCGGTGCCCTA+GGG - chr3_3:74770309-74770328 None:intergenic 40.0%
! AAAATGTTAATCGGTGCCCT+AGG - chr3_3:74770310-74770329 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+AGG + chr3_3:74770425-74770444 Msa0472330:intron 40.0%
GATATAAAGTTGCTTCCCTC+AGG + chr3_3:74770508-74770527 Msa0472330:intron 40.0%
CGGAAATATCTAGTGATGTC+AGG - chr3_3:74770837-74770856 None:intergenic 40.0%
TACTGCTATACTATTGGGCT+CGG + chr3_3:74770983-74771002 Msa0472330:intron 40.0%
ACGGAGCGAGTACTAAATTT+AGG - chr3_3:74771145-74771164 None:intergenic 40.0%
ATGTAAACACCTACATCCTC+CGG + chr3_3:74771171-74771190 Msa0472330:intron 40.0%
TTGCTTATATTAGTGACCGG+AGG + chr3_3:74771295-74771314 Msa0472330:intron 40.0%
GCATCTAGGAACTTGAAAAG+GGG - chr3_3:74771356-74771375 None:intergenic 40.0%
AAGGGGTTTACATATACGGA+CGG + chr3_3:74771548-74771567 Msa0472330:intron 40.0%
!! GTTTTGAACCGAACCAAACA+TGG - chr3_3:74772047-74772066 None:intergenic 40.0%
!! ATCTAGTATGGTTCGGTTCT+CGG + chr3_3:74772089-74772108 Msa0472330:intron 40.0%
!! GGTTCGATTCATCGGTTTAT+TGG - chr3_3:74772131-74772150 None:intergenic 40.0%
!! TTAGCATCGGTTCGATTCAT+CGG - chr3_3:74772139-74772158 None:intergenic 40.0%
TATCACTAAAATGGGGAGTG+GGG - chr3_3:74772162-74772181 None:intergenic 40.0%
TAAAAAAGAACACTAGCCGC+CGG + chr3_3:74772304-74772323 Msa0472330:intron 40.0%
TAAGGAATAGACGATCCTAG+CGG - chr3_3:74772357-74772376 None:intergenic 40.0%
!! CCAAACTAGTTGGTTTGGAT+CGG - chr3_3:74772539-74772558 None:intergenic 40.0%
! CCAAACCAACTAGTTTGGTT+CGG + chr3_3:74772541-74772560 Msa0472330:intron 40.0%
AAGAACCGAACCAAACTAGT+TGG - chr3_3:74772549-74772568 None:intergenic 40.0%
!! AAATCTTCATCGGTTCGGTT+TGG - chr3_3:74772596-74772615 None:intergenic 40.0%
CGAACCGATGAAGATTTCAT+TGG + chr3_3:74772599-74772618 Msa0472330:intron 40.0%
! TTATTAGGGGTGTAACGGTT+CGG - chr3_3:74772659-74772678 None:intergenic 40.0%
GTTCGAATCACATTTACGAG+GGG - chr3_3:74773007-74773026 None:intergenic 40.0%
GGTTCGAATCACATTTACGA+GGG - chr3_3:74773008-74773027 None:intergenic 40.0%
AGGTTCGAATCACATTTACG+AGG - chr3_3:74773009-74773028 None:intergenic 40.0%
ACTAAACCTAGCTACAACGA+GGG + chr3_3:74773265-74773284 Msa0472330:intron 40.0%
CATGGTAATTGTATGTGGCA+GGG + chr3_3:74773389-74773408 Msa0472330:intron 40.0%
CTGCAAAGAAGTTAGGGAAT+TGG + chr3_3:74773428-74773447 Msa0472330:CDS 40.0%
GCAAAGAAGTTAGGGAATTG+GGG + chr3_3:74773430-74773449 Msa0472330:CDS 40.0%
AGAGTACATATCAGAGAGCT+TGG + chr3_3:74773464-74773483 Msa0472330:CDS 40.0%
GAGTACATATCAGAGAGCTT+GGG + chr3_3:74773465-74773484 Msa0472330:CDS 40.0%
!!! AGGAAAGTTTTAGGGGAACA+AGG + chr3_3:74773507-74773526 Msa0472330:CDS 40.0%
!!! GGAAAGTTTTAGGGGAACAA+GGG + chr3_3:74773508-74773527 Msa0472330:CDS 40.0%
! CCATAAGTAAGTTCTGGTTG+TGG - chr3_3:74773567-74773586 None:intergenic 40.0%
CCACAACCAGAACTTACTTA+TGG + chr3_3:74773564-74773583 Msa0472330:CDS 40.0%
GGCAATCCATAAGTAAGTTC+TGG - chr3_3:74773573-74773592 None:intergenic 40.0%
! GAACTTACTTATGGATTGCC+AGG + chr3_3:74773573-74773592 Msa0472330:CDS 40.0%
TAACATAGGTGATCAACTGC+AGG + chr3_3:74773713-74773732 Msa0472330:CDS 40.0%
TCACCTTAAGACACACTTGA+TGG + chr3_3:74773821-74773840 Msa0472330:intron 40.0%
AGTCCATCAAGTGTGTCTTA+AGG - chr3_3:74773827-74773846 None:intergenic 40.0%
!! ACTCGAAGTTTGTTAGAAGC+TGG - chr3_3:74773902-74773921 None:intergenic 40.0%
GACATTTCAACACACTCTCT+TGG - chr3_3:74774058-74774077 None:intergenic 40.0%
!! TGATTTCAGGCTTTGAGCAA+CGG + chr3_3:74774193-74774212 Msa0472330:intron 40.0%
!! ACGGGCTTTATAAGAGTGTT+TGG + chr3_3:74774212-74774231 Msa0472330:CDS 40.0%
AATGAAGCCACAGAAAGTCT+TGG - chr3_3:74774265-74774284 None:intergenic 40.0%
ATTTCTCTGCCCAGATAATG+AGG + chr3_3:74774282-74774301 Msa0472330:CDS 40.0%
!! ACTATAGCAAGTTCTGGAGT+AGG + chr3_3:74774380-74774399 Msa0472330:CDS 40.0%
!! CTATAGCAAGTTCTGGAGTA+GGG + chr3_3:74774381-74774400 Msa0472330:CDS 40.0%
CTTGGACAAAGAACACTGTT+TGG + chr3_3:74774405-74774424 Msa0472330:CDS 40.0%
!! AGTAACCTTTAAGACGCGAT+AGG + chr3_3:74774443-74774462 Msa0472330:exon 40.0%
TTGTACCTATCGCGTCTTAA+AGG - chr3_3:74774451-74774470 None:intergenic 40.0%
GACGCGATAGGTACAAAATA+AGG + chr3_3:74774455-74774474 Msa0472330:three_prime_UTR 40.0%
TGAGGATTGGATAGCAACAA+GGG - chr3_3:74774524-74774543 None:intergenic 40.0%
CACATTTCAGCTCATCTTCC+TGG + chr3_3:74766736-74766755 Msa0472330:CDS 45.0%
! GACACCAAAGTGCTTTCTTC+CGG + chr3_3:74766865-74766884 Msa0472330:CDS 45.0%
!! GATTCCGGAAGAAAGCACTT+TGG - chr3_3:74766872-74766891 None:intergenic 45.0%
TTCGGGTCTGATGTAGCTTT+CGG - chr3_3:74766911-74766930 None:intergenic 45.0%
!!! CAGCTCCTATGGTTTTTTCC+AGG + chr3_3:74767038-74767057 Msa0472330:CDS 45.0%
!!! CAGTGGCATTTTAGAACCAG+TGG - chr3_3:74767266-74767285 None:intergenic 45.0%
!! CACTGGTTCTAAAATGCCAC+TGG + chr3_3:74767264-74767283 Msa0472330:intron 45.0%
! GCCACTGGTTGTAACATAAG+TGG + chr3_3:74767279-74767298 Msa0472330:intron 45.0%
ATGCATAGTGTCTATGAGCC+AGG + chr3_3:74767305-74767324 Msa0472330:intron 45.0%
! AAGAGGAGGTGCATAATTGG+AGG + chr3_3:74767652-74767671 Msa0472330:CDS 45.0%
! AGAGGAGGTGCATAATTGGA+GGG + chr3_3:74767653-74767672 Msa0472330:CDS 45.0%
GAGGATTAGAAGGCCATTCT+GGG - chr3_3:74767719-74767738 None:intergenic 45.0%
CGTGGCTGAAATTAGAGAGA+CGG - chr3_3:74767777-74767796 None:intergenic 45.0%
! CTTGTCCGTTGATAGATACG+TGG - chr3_3:74767795-74767814 None:intergenic 45.0%
TGCCCTTAAGGCACAAGATA+AGG - chr3_3:74768262-74768281 None:intergenic 45.0%
AAATGTTAACCTGTGCCCCA+GGG - chr3_3:74770071-74770090 None:intergenic 45.0%
! AATGTTAATCGGTGCCCTAG+GGG - chr3_3:74770308-74770327 None:intergenic 45.0%
GTGAAGAGCTTACGTCAACA+CGG - chr3_3:74770857-74770876 None:intergenic 45.0%
ATGTCCAGATCTTACTGTCC+TGG + chr3_3:74770884-74770903 Msa0472330:intron 45.0%
TGTCCAGATCTTACTGTCCT+GGG + chr3_3:74770885-74770904 Msa0472330:intron 45.0%
TCGTAAAGGGAAACAGATCC+CGG - chr3_3:74770913-74770932 None:intergenic 45.0%
TAATAGTGACCGGAGGATGT+AGG - chr3_3:74771183-74771202 None:intergenic 45.0%
GGTTTACATATACGGACGGA+GGG + chr3_3:74771552-74771571 Msa0472330:intron 45.0%
!! TCGGTTTGGTTCGGTTTCAT+CGG - chr3_3:74772012-74772031 None:intergenic 45.0%
!!! GGTCGGATACTTTTTCGGTT+TGG - chr3_3:74772026-74772045 None:intergenic 45.0%
GTATCCGACCATGTTTGGTT+CGG + chr3_3:74772036-74772055 Msa0472330:intron 45.0%
TGAACCGAACCAAACATGGT+CGG - chr3_3:74772043-74772062 None:intergenic 45.0%
!! CAGTTTAGGTTGGTTCGGTT+TGG - chr3_3:74772069-74772088 None:intergenic 45.0%
!! CTAGTTGGTTTGGATCGGTT+TGG - chr3_3:74772534-74772553 None:intergenic 45.0%
CCGATCCAAACCAACTAGTT+TGG + chr3_3:74772536-74772555 Msa0472330:intron 45.0%
CCGAACCAAACTAGTTGGTT+TGG - chr3_3:74772544-74772563 None:intergenic 45.0%
!! TTCATCGGTTCGGTTTGGTT+CGG - chr3_3:74772591-74772610 None:intergenic 45.0%
!! TGTAACGGTTCGGTTTGGAT+TGG - chr3_3:74772649-74772668 None:intergenic 45.0%
GACTAAACCTAGCTACAACG+AGG + chr3_3:74773264-74773283 Msa0472330:intron 45.0%
GCATGGTAATTGTATGTGGC+AGG + chr3_3:74773388-74773407 Msa0472330:intron 45.0%
!! GATTTCAGGCTTTGAGCAAC+GGG + chr3_3:74774194-74774213 Msa0472330:intron 45.0%
TGAGAAGCCAAGACTTTCTG+TGG + chr3_3:74774255-74774274 Msa0472330:CDS 45.0%
CTGAGGATTGGATAGCAACA+AGG - chr3_3:74774525-74774544 None:intergenic 45.0%
! CTTCATAGGACTCTGAGGAT+TGG - chr3_3:74774537-74774556 None:intergenic 45.0%
CTGCAAAAGCGAAAAAGGCA+TGG - chr3_3:74774606-74774625 None:intergenic 45.0%
!! TTAATATATTGTTAATTAAT+TGG + chr3_3:74767474-74767493 Msa0472330:intron 5.0%
!!! TTTTAAGATAATTTTTTTTA+AGG - chr3_3:74768566-74768585 None:intergenic 5.0%
!!! TTTTTTATGATTTTTTAAAA+AGG + chr3_3:74768672-74768691 Msa0472330:intron 5.0%
!!! TTTTAAGAATATAATATTTT+AGG + chr3_3:74772687-74772706 Msa0472330:intron 5.0%
!! TGTTAAAAAAAAAAAAAAAA+AGG - chr3_3:74773078-74773097 None:intergenic 5.0%
CTGAAGAACGAGTAGCTTCC+AGG - chr3_3:74766757-74766776 None:intergenic 50.0%
TCGGGTCTGATGTAGCTTTC+GGG - chr3_3:74766910-74766929 None:intergenic 50.0%
GGAGGATTAGAAGGCCATTC+TGG - chr3_3:74767720-74767739 None:intergenic 50.0%
!! GTGTCACTGACTCACTGACT+AGG + chr3_3:74767814-74767833 Msa0472330:intron 50.0%
! CTGACTCACTGACTAGGTCT+AGG + chr3_3:74767820-74767839 Msa0472330:intron 50.0%
ATGCTTAACCAGTGCCACAG+AGG - chr3_3:74769928-74769947 None:intergenic 50.0%
AATGTTAACCTGTGCCCCAG+GGG - chr3_3:74770070-74770089 None:intergenic 50.0%
GAAATGTTAACCTGTGCCCC+AGG - chr3_3:74770072-74770091 None:intergenic 50.0%
TACCCTTAACCATTGCCCCT+AGG + chr3_3:74770290-74770309 Msa0472330:intron 50.0%
ACCCTTAACCATTGCCCCTA+GGG + chr3_3:74770291-74770310 Msa0472330:intron 50.0%
GTAAAGGGAAACAGATCCCG+GGG - chr3_3:74770911-74770930 None:intergenic 50.0%
CGTAAAGGGAAACAGATCCC+GGG - chr3_3:74770912-74770931 None:intergenic 50.0%
GGGTTTACATATACGGACGG+AGG + chr3_3:74771551-74771570 Msa0472330:intron 50.0%
TAGAGACCCTCGTTGTAGCT+AGG - chr3_3:74773274-74773293 None:intergenic 50.0%
TGTATGTGGCAGGGAAACAG+TGG + chr3_3:74773398-74773417 Msa0472330:intron 50.0%
! GTAAGTTCTGGTTGTGGGCA+TGG - chr3_3:74773561-74773580 None:intergenic 50.0%
CTCCAAGACCTTCATGTTGC+TGG + chr3_3:74773627-74773646 Msa0472330:CDS 50.0%
! TGCCATCTTTGAGGACCTGT+AGG - chr3_3:74773653-74773672 None:intergenic 50.0%
AGGTCCTCAAAGATGGCAAG+TGG + chr3_3:74773655-74773674 Msa0472330:CDS 50.0%
CAAGCCACTTGCCATCTTTG+AGG - chr3_3:74773662-74773681 None:intergenic 50.0%
ACAGGAACACGCGTAACTGT+TGG + chr3_3:74773862-74773881 Msa0472330:intron 50.0%
GAACACGCGTAACTGTTGGA+GGG + chr3_3:74773866-74773885 Msa0472330:intron 50.0%
! TCTTCTGTGAGTGGCTTTGC+AGG - chr3_3:74774319-74774338 None:intergenic 50.0%
GCAAAGCCACTCACAGAAGA+TGG + chr3_3:74774319-74774338 Msa0472330:CDS 50.0%
CCAGAACCATCTTCTGTGAG+TGG - chr3_3:74774328-74774347 None:intergenic 50.0%
CCACTCACAGAAGATGGTTC+TGG + chr3_3:74774325-74774344 Msa0472330:CDS 50.0%
!! GGTTCTGGAGCTGTATACAG+AGG + chr3_3:74774340-74774359 Msa0472330:CDS 50.0%
!! CAAGTTCTGGAGTAGGGACT+TGG + chr3_3:74774387-74774406 Msa0472330:CDS 50.0%
GGTGAAGCATGCAGCTCCTA+TGG + chr3_3:74767027-74767046 Msa0472330:CDS 55.0%
ACATGCAAGCCTGATGCCAC+TGG + chr3_3:74767247-74767266 Msa0472330:intron 55.0%
ATACCCTTAACCAGTGCCCC+TGG + chr3_3:74770051-74770070 Msa0472330:intron 55.0%
TACCCTTAACCAGTGCCCCT+GGG + chr3_3:74770052-74770071 Msa0472330:intron 55.0%
GCCCTAGGGGCAATGGTTAA+GGG - chr3_3:74770295-74770314 None:intergenic 55.0%
TGCCCTAGGGGCAATGGTTA+AGG - chr3_3:74770296-74770315 None:intergenic 55.0%
! ATGGGGAGTGGGGTTAGCAT+CGG - chr3_3:74772152-74772171 None:intergenic 55.0%
!! AACGATGGGTTAGGTGCGAC+CGG - chr3_3:74772326-74772345 None:intergenic 55.0%
! GCGAAGAGGAACGATGGGTT+AGG - chr3_3:74772335-74772354 None:intergenic 55.0%
TAGCGGCGAAGAGGAACGAT+GGG - chr3_3:74772340-74772359 None:intergenic 55.0%
!! AGGGGTGTAACGGTTCGGTT+TGG - chr3_3:74772654-74772673 None:intergenic 55.0%
! AGTTCTGGTTGTGGGCATGG+TGG - chr3_3:74773558-74773577 None:intergenic 55.0%
GCATTTGGGTCTGTATGCCC+TGG - chr3_3:74773594-74773613 None:intergenic 55.0%
GGCCAGCAACATGAAGGTCT+TGG - chr3_3:74773632-74773651 None:intergenic 55.0%
CCTGTAGGCCAGCAACATGA+AGG - chr3_3:74773638-74773657 None:intergenic 55.0%
! CCTTCATGTTGCTGGCCTAC+AGG + chr3_3:74773635-74773654 Msa0472330:CDS 55.0%
GGCCTACAGGTCCTCAAAGA+TGG + chr3_3:74773648-74773667 Msa0472330:CDS 55.0%
GGAACACGCGTAACTGTTGG+AGG + chr3_3:74773865-74773884 Msa0472330:intron 55.0%
CGCTGCTTCATAGGACTCTG+AGG - chr3_3:74774542-74774561 None:intergenic 55.0%
CATGCTAACCGGTGCCTCTG+TGG + chr3_3:74769911-74769930 Msa0472330:intron 60.0%
! AACCAGTGCCACAGAGGCAC+CGG - chr3_3:74769922-74769941 None:intergenic 60.0%
ACCCTTAACCAGTGCCCCTG+GGG + chr3_3:74770053-74770072 Msa0472330:intron 60.0%
! AATCGGTGCCCTAGGGGCAA+TGG - chr3_3:74770302-74770321 None:intergenic 60.0%
GGGCCCAGGACAGTAAGATC+TGG - chr3_3:74770891-74770910 None:intergenic 60.0%
GATCTTACTGTCCTGGGCCC+CGG + chr3_3:74770891-74770910 Msa0472330:intron 60.0%
ATCTTACTGTCCTGGGCCCC+GGG + chr3_3:74770892-74770911 Msa0472330:intron 60.0%
CTAGCGGCGAAGAGGAACGA+TGG - chr3_3:74772341-74772360 None:intergenic 60.0%
CATCGTTCCTCTTCGCCGCT+AGG + chr3_3:74772339-74772358 Msa0472330:intron 60.0%
AGACGATCCTAGCGGCGAAG+AGG - chr3_3:74772349-74772368 None:intergenic 60.0%
AGGGGAACAAGGGCAGCACA+TGG + chr3_3:74773518-74773537 Msa0472330:CDS 60.0%
AACCGGTGCCTCTGTGGCAC+TGG + chr3_3:74769917-74769936 Msa0472330:intron 65.0%
!! GCCCCAGGGGCACTGGTTAA+GGG - chr3_3:74770057-74770076 None:intergenic 65.0%
!! TGCCCCAGGGGCACTGGTTA+AGG - chr3_3:74770058-74770077 None:intergenic 65.0%
!! GATGGGTTAGGTGCGACCGG+CGG - chr3_3:74772323-74772342 None:intergenic 65.0%
AACCAGTGCCCCTGGGGCAC+AGG + chr3_3:74770059-74770078 Msa0472330:intron 70.0%
! AACCTGTGCCCCAGGGGCAC+TGG - chr3_3:74770064-74770083 None:intergenic 70.0%
GGAAACAGATCCCGGGGCCC+AGG - chr3_3:74770905-74770924 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 74766701 74774852 74766701 ID=Msa0472330;Name=Msa0472330
chr3_3 mRNA 74766701 74774852 74766701 ID=Msa0472330-mRNA-1;Parent=Msa0472330;Name=Msa0472330-mRNA-1;_AED=0.01;_eAED=0.01;_QI=26|1|1|1|1|1|4|405|383
chr3_3 exon 74766701 74767059 74766701 ID=Msa0472330-mRNA-1:exon:19150;Parent=Msa0472330-mRNA-1
chr3_3 exon 74767501 74767748 74767501 ID=Msa0472330-mRNA-1:exon:19151;Parent=Msa0472330-mRNA-1
chr3_3 exon 74773410 74773734 74773410 ID=Msa0472330-mRNA-1:exon:19152;Parent=Msa0472330-mRNA-1
chr3_3 exon 74774202 74774852 74774202 ID=Msa0472330-mRNA-1:exon:19153;Parent=Msa0472330-mRNA-1
chr3_3 five_prime_UTR 74766701 74766726 74766701 ID=Msa0472330-mRNA-1:five_prime_utr;Parent=Msa0472330-mRNA-1
chr3_3 CDS 74766727 74767059 74766727 ID=Msa0472330-mRNA-1:cds;Parent=Msa0472330-mRNA-1
chr3_3 CDS 74767501 74767748 74767501 ID=Msa0472330-mRNA-1:cds;Parent=Msa0472330-mRNA-1
chr3_3 CDS 74773410 74773734 74773410 ID=Msa0472330-mRNA-1:cds;Parent=Msa0472330-mRNA-1
chr3_3 CDS 74774202 74774447 74774202 ID=Msa0472330-mRNA-1:cds;Parent=Msa0472330-mRNA-1
chr3_3 three_prime_UTR 74774448 74774852 74774448 ID=Msa0472330-mRNA-1:three_prime_utr;Parent=Msa0472330-mRNA-1
Gene Sequence

>Msa0472330

ATGCTATGTCACATTTCAGCTCATCTTCCTGGAAGCTACTCGTTCTTCAGCTCCTTAACCCCAAAGAACTCTATTTTGAGTGGTTGTCATTTTCCTTGGTTCTTTCTTTGTATTTTCCCCCAAAGATTATATATAATGGACACCAAAGTGCTTTCTTCCGGAATCCATTATTCAAAATTACCCGAAAGCTACATCAGACCCGAATCTGATAGACCATGTCTTTCTCAAGTCTCTGAGTTCGAAAATGTTCCTATCATTGATTTGGGTTCTCACAACAGAACACAGATTGTGCAGCAAATTGGTGAAGCATGCAGCTCCTATGGTTTTTTCCAGGTAGTTAATCATGGGGTGCCTCTAGAAGAATTGAAAAAAACAGCAGAAGTGGCATATGATTTTTTCAAGTTGCCAGTGGATGAGAAAATGAAGTTGTATTCAGACGATCCCACGAAGACAATGAGACTATCTACAAGTTTTAATGTGAACAAAGAGGAGGTGCATAATTGGAGGGACTACCTTAGACTTCATTGCTATCCTTTGGATAATTATGTCCCAGAATGGCCTTCTAATCCTCCTTCATTCAAGGAAACAGTGGCAAATTACTGCAAAGAAGTTAGGGAATTGGGGTTGAGAATAGAAGAGTACATATCAGAGAGCTTGGGCCTAGAAAAAAATTACTTAAGGAAAGTTTTAGGGGAACAAGGGCAGCACATGGCAGTGAATTACTATCCACCATGCCCACAACCAGAACTTACTTATGGATTGCCAGGGCATACAGACCCAAATGCACTTACAATTCTACTCCAAGACCTTCATGTTGCTGGCCTACAGGTCCTCAAAGATGGCAAGTGGCTTGCTGTTAACCCAATTCCTGATGCCTTTGTTATTAACATAGGTGATCAACTGCAGGCTTTGAGCAACGGGCTTTATAAGAGTGTTTGGCATCGGGCTATTGTCAATGCTGAGAAGCCAAGACTTTCTGTGGCTTCATTTCTCTGCCCAGATAATGAGGCATTGATATGTCCTGCAAAGCCACTCACAGAAGATGGTTCTGGAGCTGTATACAGAGGATTTACATATCCAGAATACTATAGCAAGTTCTGGAGTAGGGACTTGGACAAAGAACACTGTTTGGAATTTTTCAAGAACAAGTAA
Protein sequence

>Msa0472330

MLCHISAHLPGSYSFFSSLTPKNSILSGCHFPWFFLCIFPQRLYIMDTKVLSSGIHYSKLPESYIRPESDRPCLSQVSEFENVPIIDLGSHNRTQIVQQIGEACSSYGFFQVVNHGVPLEELKKTAEVAYDFFKLPVDEKMKLYSDDPTKTMRLSTSFNVNKEEVHNWRDYLRLHCYPLDNYVPEWPSNPPSFKETVANYCKEVRELGLRIEEYISESLGLEKNYLRKVLGEQGQHMAVNYYPPCPQPELTYGLPGHTDPNALTILLQDLHVAGLQVLKDGKWLAVNPIPDAFVINIGDQLQALSNGLYKSVWHRAIVNAEKPRLSVASFLCPDNEALICPAKPLTEDGSGAVYRGFTYPEYYSKFWSRDLDKEHCLEFFKNK*