Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380770 | KEH35768.1 | 83.951 | 324 | 23 | 3 | 1 | 295 | 1 | 324 | 0.0 | 512 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380770 | sp|P25010|CCNAL_DAUCA | 48.318 | 327 | 117 | 7 | 20 | 295 | 13 | 338 | 1.38e-93 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380770 | A0A072V341 | 83.951 | 324 | 23 | 3 | 1 | 295 | 1 | 324 | 0.0 | 512 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0380770 | Msa0404800 | 0.825742 | 3.969918e-54 | -8.615850e-47 |
| Msa0380770 | Msa0500270 | 0.862380 | 5.279635e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380770 | MtrunA17_Chr3g0134441 | 81.459 | 329 | 27 | 4 | 1 | 295 | 1 | 329 | 2.18e-179 | 497 |
| Msa0380770 | MtrunA17_Chr3g0134401 | 52.187 | 343 | 109 | 10 | 2 | 295 | 1 | 337 | 1.98e-104 | 308 |
| Msa0380770 | MtrunA17_Chr3g0134431 | 66.957 | 230 | 52 | 2 | 64 | 277 | 14 | 235 | 1.86e-102 | 300 |
| Msa0380770 | MtrunA17_Chr3g0134421 | 50.000 | 352 | 115 | 9 | 2 | 295 | 1 | 349 | 4.67e-100 | 297 |
| Msa0380770 | MtrunA17_Chr1g0152871 | 47.674 | 344 | 127 | 7 | 5 | 295 | 14 | 357 | 5.46e-99 | 295 |
| Msa0380770 | MtrunA17_Chr3g0134411 | 48.056 | 360 | 117 | 9 | 2 | 295 | 1 | 356 | 2.76e-98 | 293 |
| Msa0380770 | MtrunA17_Chr3g0125051 | 45.977 | 261 | 110 | 4 | 64 | 295 | 245 | 503 | 1.95e-68 | 221 |
| Msa0380770 | MtrunA17_Chr3g0125041 | 42.177 | 294 | 128 | 8 | 38 | 295 | 221 | 508 | 1.97e-63 | 207 |
| Msa0380770 | MtrunA17_Chr3g0138431 | 46.063 | 254 | 106 | 5 | 64 | 288 | 218 | 469 | 1.70e-60 | 199 |
| Msa0380770 | MtrunA17_Chr1g0148681 | 41.980 | 293 | 137 | 6 | 28 | 288 | 121 | 412 | 1.89e-60 | 197 |
| Msa0380770 | MtrunA17_Chr2g0332181 | 41.762 | 261 | 120 | 5 | 64 | 295 | 172 | 429 | 4.04e-54 | 181 |
| Msa0380770 | MtrunA17_Chr2g0332171 | 41.961 | 255 | 115 | 6 | 64 | 287 | 226 | 478 | 1.97e-52 | 178 |
| Msa0380770 | MtrunA17_Chr8g0370671 | 31.707 | 246 | 142 | 4 | 60 | 282 | 177 | 419 | 6.65e-34 | 128 |
| Msa0380770 | MtrunA17_Chr5g0441371 | 34.118 | 255 | 139 | 6 | 44 | 273 | 150 | 400 | 3.18e-33 | 126 |
| Msa0380770 | MtrunA17_Chr7g0255771 | 29.938 | 324 | 186 | 8 | 1 | 285 | 129 | 450 | 6.55e-33 | 125 |
| Msa0380770 | MtrunA17_Chr5g0406741 | 31.727 | 249 | 144 | 4 | 57 | 282 | 170 | 415 | 2.31e-32 | 124 |
| Msa0380770 | MtrunA17_Chr8g0357001 | 32.161 | 199 | 111 | 3 | 73 | 248 | 498 | 695 | 6.51e-23 | 98.6 |
| Msa0380770 | MtrunA17_Chr3g0102851 | 30.047 | 213 | 118 | 7 | 90 | 271 | 56 | 268 | 4.08e-15 | 73.9 |
| Msa0380770 | MtrunA17_Chr3g0102861 | 29.808 | 208 | 108 | 7 | 90 | 259 | 46 | 253 | 6.84e-14 | 70.5 |
| Msa0380770 | MtrunA17_Chr3g0102621 | 27.650 | 217 | 124 | 6 | 90 | 276 | 52 | 265 | 1.34e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380770 | AT5G43080.2 | 45.536 | 336 | 137 | 6 | 4 | 295 | 12 | 345 | 4.83e-92 | 277 |
| Msa0380770 | AT5G43080.1 | 45.906 | 342 | 132 | 8 | 4 | 295 | 12 | 350 | 5.65e-91 | 275 |
| Msa0380770 | AT1G47230.1 | 44.126 | 349 | 134 | 7 | 6 | 295 | 14 | 360 | 2.84e-89 | 270 |
| Msa0380770 | AT1G47230.2 | 44.000 | 350 | 134 | 8 | 6 | 295 | 14 | 361 | 2.15e-87 | 266 |
| Msa0380770 | AT1G47210.2 | 42.655 | 354 | 136 | 9 | 4 | 291 | 11 | 363 | 3.47e-84 | 258 |
| Msa0380770 | AT1G47220.1 | 47.368 | 285 | 114 | 5 | 42 | 291 | 34 | 317 | 1.05e-76 | 237 |
| Msa0380770 | AT1G44110.1 | 41.214 | 313 | 145 | 6 | 12 | 295 | 155 | 457 | 8.32e-64 | 208 |
| Msa0380770 | AT5G11300.1 | 47.390 | 249 | 102 | 4 | 73 | 292 | 184 | 432 | 3.94e-62 | 203 |
| Msa0380770 | AT5G25380.3 | 44.361 | 266 | 115 | 5 | 55 | 290 | 169 | 431 | 1.25e-58 | 194 |
| Msa0380770 | AT5G25380.1 | 44.361 | 266 | 115 | 5 | 55 | 290 | 169 | 431 | 1.25e-58 | 194 |
| Msa0380770 | AT5G25380.4 | 44.361 | 266 | 115 | 5 | 55 | 290 | 175 | 437 | 2.46e-58 | 193 |
| Msa0380770 | AT1G15570.1 | 43.443 | 244 | 109 | 3 | 73 | 287 | 200 | 443 | 7.34e-56 | 187 |
| Msa0380770 | AT1G80370.1 | 44.048 | 252 | 111 | 5 | 73 | 295 | 209 | 459 | 4.28e-55 | 185 |
| Msa0380770 | AT5G25380.2 | 43.874 | 253 | 109 | 5 | 55 | 277 | 169 | 418 | 1.53e-53 | 180 |
| Msa0380770 | AT1G77390.1 | 40.996 | 261 | 123 | 4 | 64 | 295 | 183 | 441 | 3.19e-53 | 180 |
| Msa0380770 | AT5G11300.2 | 50.556 | 180 | 68 | 3 | 73 | 231 | 184 | 363 | 1.34e-47 | 164 |
| Msa0380770 | AT1G47210.1 | 40.659 | 182 | 72 | 5 | 4 | 149 | 11 | 192 | 4.67e-35 | 125 |
| Msa0380770 | AT5G06150.1 | 31.596 | 307 | 181 | 5 | 1 | 282 | 122 | 424 | 3.27e-34 | 129 |
| Msa0380770 | AT4G37490.1 | 34.050 | 279 | 149 | 8 | 38 | 285 | 142 | 416 | 5.38e-34 | 128 |
| Msa0380770 | AT3G11520.1 | 37.500 | 224 | 116 | 3 | 87 | 287 | 183 | 405 | 1.07e-32 | 125 |
| Msa0380770 | AT3G11520.2 | 40.104 | 192 | 92 | 2 | 87 | 255 | 183 | 374 | 1.31e-30 | 119 |
| Msa0380770 | AT2G26760.1 | 36.111 | 252 | 132 | 6 | 60 | 286 | 131 | 378 | 2.68e-30 | 118 |
| Msa0380770 | AT1G20610.1 | 31.963 | 219 | 126 | 2 | 87 | 282 | 202 | 420 | 4.03e-30 | 118 |
| Msa0380770 | AT1G76310.1 | 32.895 | 228 | 128 | 4 | 81 | 284 | 197 | 423 | 7.88e-30 | 117 |
| Msa0380770 | AT4G35620.1 | 35.193 | 233 | 127 | 3 | 81 | 290 | 192 | 423 | 5.47e-28 | 112 |
| Msa0380770 | AT1G16330.1 | 31.731 | 208 | 119 | 2 | 89 | 273 | 422 | 629 | 2.87e-27 | 111 |
| Msa0380770 | AT2G17620.1 | 35.169 | 236 | 129 | 3 | 81 | 293 | 191 | 425 | 3.59e-27 | 110 |
| Msa0380770 | AT1G76310.2 | 35.028 | 177 | 97 | 3 | 81 | 240 | 197 | 372 | 3.76e-25 | 103 |
| Msa0380770 | AT4G35620.2 | 39.548 | 177 | 90 | 2 | 81 | 241 | 192 | 367 | 7.66e-25 | 102 |
| Msa0380770 | AT1G76310.3 | 29.688 | 256 | 127 | 5 | 81 | 284 | 197 | 451 | 1.98e-24 | 102 |
| Msa0380770 | AT5G06150.2 | 32.836 | 201 | 113 | 4 | 1 | 183 | 122 | 318 | 2.61e-20 | 89.7 |
| Msa0380770 | AT1G76310.4 | 39.344 | 122 | 56 | 3 | 81 | 185 | 197 | 317 | 3.06e-17 | 81.3 |
| Msa0380770 | AT1G20590.1 | 31.126 | 151 | 81 | 2 | 123 | 250 | 66 | 216 | 1.07e-14 | 72.8 |
| Msa0380770 | AT1G14750.4 | 28.899 | 218 | 123 | 5 | 65 | 251 | 184 | 400 | 1.95e-12 | 67.4 |
| Msa0380770 | AT1G14750.2 | 27.982 | 218 | 126 | 4 | 65 | 251 | 184 | 401 | 2.12e-12 | 67.4 |
| Msa0380770 | AT1G14750.3 | 27.602 | 221 | 129 | 4 | 65 | 254 | 352 | 572 | 2.20e-12 | 67.8 |
| Msa0380770 | AT1G14750.1 | 27.982 | 218 | 126 | 4 | 65 | 251 | 352 | 569 | 4.04e-12 | 67.0 |
Find 50 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCTGAGCTAAGTTTAT+TGG | 0.148419 | 3_1:+82740191 | Msa0380770:CDS |
| CACGTTTATTCATGTGATTT+TGG | 0.168414 | 3_1:-82738856 | None:intergenic |
| TGTGAGATTCTTGCCTTCTT+TGG | 0.236242 | 3_1:+82740224 | Msa0380770:CDS |
| TCGCTGTTTCTTACATAGAT+AGG | 0.328623 | 3_1:+82739253 | Msa0380770:CDS |
| AATGAGATTGGTTGTTGAAT+TGG | 0.331057 | 3_1:-82738897 | None:intergenic |
| TGAGAGGAATATTGATTGAT+TGG | 0.331773 | 3_1:+82739181 | Msa0380770:CDS |
| CAAGACCCTAGATAATGATA+TGG | 0.336031 | 3_1:+82739857 | Msa0380770:CDS |
| GACCCATAAGATTACCTCTA+TGG | 0.352024 | 3_1:-82739020 | None:intergenic |
| TGAAGCTTGACCCTATTGAT+AGG | 0.352654 | 3_1:-82739291 | None:intergenic |
| AAATAATTAATAAACAGATT+TGG | 0.374757 | 3_1:-82739919 | None:intergenic |
| TATACCCAGAGTATTCTTGC+AGG | 0.389030 | 3_1:-82740433 | None:intergenic |
| ACGCATTCCTTCAACTCAAC+TGG | 0.389273 | 3_1:-82740458 | None:intergenic |
| CGATTGAGAAACAATGAGAT+TGG | 0.404565 | 3_1:-82738909 | None:intergenic |
| GACTGCCCATATCATTATCT+AGG | 0.425727 | 3_1:-82739863 | None:intergenic |
| ATGAGATTGGTTGTTGAATT+GGG | 0.429099 | 3_1:-82738896 | None:intergenic |
| TAGGGTCAAGCTTCAATTGT+TGG | 0.434090 | 3_1:+82739299 | Msa0380770:CDS |
| GAGATTCTTGCCTTCTTTGG+TGG | 0.445209 | 3_1:+82740227 | Msa0380770:CDS |
| ATCTCCATGTAATCCTTCAT+TGG | 0.446797 | 3_1:-82739132 | None:intergenic |
| TTATAAGCACTAGAAACAAC+TGG | 0.474116 | 3_1:-82738986 | None:intergenic |
| AGGGTCAAGCTTCAATTGTT+GGG | 0.475156 | 3_1:+82739300 | Msa0380770:CDS |
| GTATAAACCAGTTGAGTTGA+AGG | 0.485366 | 3_1:+82740451 | Msa0380770:CDS |
| ATCGACGCAGCCACCAAAGA+AGG | 0.504235 | 3_1:-82740237 | None:intergenic |
| AACAGATCACTTGGTAAATG+AGG | 0.505822 | 3_1:-82740665 | None:intergenic |
| AAGGGTCATTTGAAGCTACT+CGG | 0.518059 | 3_1:+82740516 | Msa0380770:CDS |
| TCAGCCCTGCAAGAATACTC+TGG | 0.519125 | 3_1:+82740428 | Msa0380770:CDS |
| CATAATTCTTCGACATGGGG+TGG | 0.521855 | 3_1:-82739464 | None:intergenic |
| GGCTTACGATGCAATGTACA+TGG | 0.535999 | 3_1:-82739331 | None:intergenic |
| GACAAAGAGAAGACCAATGA+AGG | 0.540350 | 3_1:+82739119 | Msa0380770:CDS |
| GAAGCTTGACCCTATTGATA+GGG | 0.540822 | 3_1:-82739290 | None:intergenic |
| AAGACCCTAGATAATGATAT+GGG | 0.542783 | 3_1:+82739858 | Msa0380770:CDS |
| AAGACCAATGAAGGATTACA+TGG | 0.547107 | 3_1:+82739128 | Msa0380770:CDS |
| CTTGGTAAATGAGGAGGCGA+AGG | 0.552246 | 3_1:-82740656 | None:intergenic |
| CTGTATATGTCAAGACGGGA+AGG | 0.561150 | 3_1:+82740497 | Msa0380770:CDS |
| TCAAATTAAAACAGATCACT+TGG | 0.561830 | 3_1:-82740674 | None:intergenic |
| CAGCCCTGCAAGAATACTCT+GGG | 0.579144 | 3_1:+82740429 | Msa0380770:CDS |
| ATAATTCTTCGACATGGGGT+GGG | 0.585139 | 3_1:-82739463 | None:intergenic |
| AGGGTCATTTGAAGCTACTC+GGG | 0.585830 | 3_1:+82740517 | Msa0380770:CDS |
| ATGATCTGTATATGTCAAGA+CGG | 0.591093 | 3_1:+82740492 | Msa0380770:CDS |
| TAACTATCTTCGATCCATAG+AGG | 0.593607 | 3_1:+82739006 | Msa0380770:CDS |
| TGATCTGTATATGTCAAGAC+GGG | 0.596030 | 3_1:+82740493 | Msa0380770:CDS |
| ATACCCAGAGTATTCTTGCA+GGG | 0.596799 | 3_1:-82740432 | None:intergenic |
| ACTGCCCATATCATTATCTA+GGG | 0.603439 | 3_1:-82739862 | None:intergenic |
| GGAGAAATACAAGCAGTACA+AGG | 0.603442 | 3_1:+82740538 | Msa0380770:CDS |
| CATGAATAAACGTGTCGTGT+TGG | 0.630550 | 3_1:+82738865 | Msa0380770:CDS |
| AGATCACTTGGTAAATGAGG+AGG | 0.642418 | 3_1:-82740662 | None:intergenic |
| TTGGTAAATGAGGAGGCGAA+GGG | 0.642726 | 3_1:-82740655 | None:intergenic |
| TTGAGACTCGCTCTGCAAAG+AGG | 0.648697 | 3_1:+82738819 | Msa0380770:CDS |
| TGTATATGTCAAGACGGGAA+GGG | 0.652672 | 3_1:+82740498 | Msa0380770:CDS |
| GTAAATGAGGAGGCGAAGGG+AGG | 0.656266 | 3_1:-82740652 | None:intergenic |
| ATTGTAACAGTTCAAATACG+TGG | 0.709700 | 3_1:+82740625 | Msa0380770:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAATTTAAAAAAA+AGG | - | chr3_1:82739060-82739079 | None:intergenic | 0.0% |
| !! | TTAAAAAAAATTTAAAAAAA+AGG | - | chr3_1:82739060-82739079 | None:intergenic | 0.0% |
| !!! | TTGATTTTTTTTTTTTTAGA+TGG | + | chr3_1:82739095-82739114 | Msa0380770:intron | 10.0% |
| !! | AAATAATTAATAAACAGATT+TGG | - | chr3_1:82739922-82739941 | None:intergenic | 10.0% |
| !!! | TTGATTTTTTTTTTTTTAGA+TGG | + | chr3_1:82739095-82739114 | Msa0380770:intron | 10.0% |
| !! | AAATAATTAATAAACAGATT+TGG | - | chr3_1:82739922-82739941 | None:intergenic | 10.0% |
| !! | ATTATTTGCAAAATTCAAAT+CGG | - | chr3_1:82739365-82739384 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTCGATTATAAA+AGG | + | chr3_1:82739423-82739442 | Msa0380770:intron | 15.0% |
| !!! | AACAAATTTAAATCTTCTTT+TGG | - | chr3_1:82739753-82739772 | None:intergenic | 15.0% |
| !! | ATTATTTGCAAAATTCAAAT+CGG | - | chr3_1:82739365-82739384 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTCGATTATAAA+AGG | + | chr3_1:82739423-82739442 | Msa0380770:intron | 15.0% |
| !!! | AACAAATTTAAATCTTCTTT+TGG | - | chr3_1:82739753-82739772 | None:intergenic | 15.0% |
| !!! | TTTCAGATCATAAAAAGTAT+CGG | - | chr3_1:82739542-82739561 | None:intergenic | 20.0% |
| !!! | TATAATTGAGATCCTTTTTA+GGG | - | chr3_1:82739684-82739703 | None:intergenic | 20.0% |
| !!! | ATATAATTGAGATCCTTTTT+AGG | - | chr3_1:82739685-82739704 | None:intergenic | 20.0% |
| !! | GTATTTGATCATATAGTTAA+TGG | + | chr3_1:82740310-82740329 | Msa0380770:intron | 20.0% |
| !! | TATTACCAAATTAACATAGA+TGG | + | chr3_1:82740358-82740377 | Msa0380770:intron | 20.0% |
| !!! | TTTCAGATCATAAAAAGTAT+CGG | - | chr3_1:82739542-82739561 | None:intergenic | 20.0% |
| !!! | TATAATTGAGATCCTTTTTA+GGG | - | chr3_1:82739684-82739703 | None:intergenic | 20.0% |
| !!! | ATATAATTGAGATCCTTTTT+AGG | - | chr3_1:82739685-82739704 | None:intergenic | 20.0% |
| !! | GTATTTGATCATATAGTTAA+TGG | + | chr3_1:82740310-82740329 | Msa0380770:intron | 20.0% |
| !! | TATTACCAAATTAACATAGA+TGG | + | chr3_1:82740358-82740377 | Msa0380770:intron | 20.0% |
| !! | ACGTTTATTCATGTGATTTT+GGG | - | chr3_1:82738858-82738877 | None:intergenic | 25.0% |
| !! | ATCAATATTCCTCTCATTTT+TGG | - | chr3_1:82739177-82739196 | None:intergenic | 25.0% |
| ! | TATTGATAGGGTAAAAAGAT+AGG | - | chr3_1:82739281-82739300 | None:intergenic | 25.0% |
| !! | TATCTTTTTACCCTATCAAT+AGG | + | chr3_1:82739280-82739299 | Msa0380770:CDS | 25.0% |
| !! | ATCTTTTTACCCTATCAATA+GGG | + | chr3_1:82739281-82739300 | Msa0380770:CDS | 25.0% |
| ! | TAGTGAAATTATCAACATAG+TGG | + | chr3_1:82739562-82739581 | Msa0380770:intron | 25.0% |
| ! | AGTGAAATTATCAACATAGT+GGG | + | chr3_1:82739563-82739582 | Msa0380770:intron | 25.0% |
| ! | GACATAAGTGTTATATGTTT+GGG | + | chr3_1:82739585-82739604 | Msa0380770:intron | 25.0% |
| !! | ATAATTGAGATCCTTTTTAG+GGG | - | chr3_1:82739683-82739702 | None:intergenic | 25.0% |
| !! | AATCTTCTTTTGGTAAACTA+AGG | - | chr3_1:82739743-82739762 | None:intergenic | 25.0% |
| ! | AAACAAGAGAAGCAAAATAA+GGG | - | chr3_1:82739795-82739814 | None:intergenic | 25.0% |
| ! | TAAACAAGAGAAGCAAAATA+AGG | - | chr3_1:82739796-82739815 | None:intergenic | 25.0% |
| ! | TTGTTTATTGCTATCAATAC+AGG | + | chr3_1:82739809-82739828 | Msa0380770:intron | 25.0% |
| ! | CTTAAAAAAGTCTTAACAGT+GGG | - | chr3_1:82739888-82739907 | None:intergenic | 25.0% |
| ! | TAAGAAGAAAAATGTGAGTT+AGG | + | chr3_1:82740038-82740057 | Msa0380770:intron | 25.0% |
| !! | TTATTTTCCTTCTTTCTTTC+AGG | + | chr3_1:82740134-82740153 | Msa0380770:intron | 25.0% |
| ! | ATCAACCATCTATGTTAATT+TGG | - | chr3_1:82740366-82740385 | None:intergenic | 25.0% |
| ! | AAATTAACATAGATGGTTGA+TGG | + | chr3_1:82740365-82740384 | Msa0380770:intron | 25.0% |
| !!! | ACATTCCTTAGACTTTATTT+TGG | + | chr3_1:82740576-82740595 | Msa0380770:intron | 25.0% |
| ! | AATAGCCAAAATAAAGTCTA+AGG | - | chr3_1:82740584-82740603 | None:intergenic | 25.0% |
| !! | ACGTTTATTCATGTGATTTT+GGG | - | chr3_1:82738858-82738877 | None:intergenic | 25.0% |
| !! | ATCAATATTCCTCTCATTTT+TGG | - | chr3_1:82739177-82739196 | None:intergenic | 25.0% |
| ! | TATTGATAGGGTAAAAAGAT+AGG | - | chr3_1:82739281-82739300 | None:intergenic | 25.0% |
| !! | TATCTTTTTACCCTATCAAT+AGG | + | chr3_1:82739280-82739299 | Msa0380770:CDS | 25.0% |
| !! | ATCTTTTTACCCTATCAATA+GGG | + | chr3_1:82739281-82739300 | Msa0380770:CDS | 25.0% |
| ! | TAGTGAAATTATCAACATAG+TGG | + | chr3_1:82739562-82739581 | Msa0380770:intron | 25.0% |
| ! | AGTGAAATTATCAACATAGT+GGG | + | chr3_1:82739563-82739582 | Msa0380770:intron | 25.0% |
| ! | GACATAAGTGTTATATGTTT+GGG | + | chr3_1:82739585-82739604 | Msa0380770:intron | 25.0% |
| !! | ATAATTGAGATCCTTTTTAG+GGG | - | chr3_1:82739683-82739702 | None:intergenic | 25.0% |
| !! | AATCTTCTTTTGGTAAACTA+AGG | - | chr3_1:82739743-82739762 | None:intergenic | 25.0% |
| ! | AAACAAGAGAAGCAAAATAA+GGG | - | chr3_1:82739795-82739814 | None:intergenic | 25.0% |
| ! | TAAACAAGAGAAGCAAAATA+AGG | - | chr3_1:82739796-82739815 | None:intergenic | 25.0% |
| ! | TTGTTTATTGCTATCAATAC+AGG | + | chr3_1:82739809-82739828 | Msa0380770:intron | 25.0% |
| ! | CTTAAAAAAGTCTTAACAGT+GGG | - | chr3_1:82739888-82739907 | None:intergenic | 25.0% |
| ! | TAAGAAGAAAAATGTGAGTT+AGG | + | chr3_1:82740038-82740057 | Msa0380770:intron | 25.0% |
| !! | TTATTTTCCTTCTTTCTTTC+AGG | + | chr3_1:82740134-82740153 | Msa0380770:intron | 25.0% |
| ! | ATCAACCATCTATGTTAATT+TGG | - | chr3_1:82740366-82740385 | None:intergenic | 25.0% |
| ! | AAATTAACATAGATGGTTGA+TGG | + | chr3_1:82740365-82740384 | Msa0380770:intron | 25.0% |
| !!! | ACATTCCTTAGACTTTATTT+TGG | + | chr3_1:82740576-82740595 | Msa0380770:intron | 25.0% |
| ! | AATAGCCAAAATAAAGTCTA+AGG | - | chr3_1:82740584-82740603 | None:intergenic | 25.0% |
| ! | CACGTTTATTCATGTGATTT+TGG | - | chr3_1:82738859-82738878 | None:intergenic | 30.0% |
| ! | ATGAGATTGGTTGTTGAATT+GGG | - | chr3_1:82738899-82738918 | None:intergenic | 30.0% |
| ! | AATGAGATTGGTTGTTGAAT+TGG | - | chr3_1:82738900-82738919 | None:intergenic | 30.0% |
| TTATAAGCACTAGAAACAAC+TGG | - | chr3_1:82738989-82739008 | None:intergenic | 30.0% | |
| ATCCATAGAGGTAATCTTAT+GGG | + | chr3_1:82739018-82739037 | Msa0380770:intron | 30.0% | |
| ! | TGAGAGGAATATTGATTGAT+TGG | + | chr3_1:82739181-82739200 | Msa0380770:CDS | 30.0% |
| AAATTCAAATCGGACATAGA+AGG | - | chr3_1:82739355-82739374 | None:intergenic | 30.0% | |
| AAAGCATAATTCTTCGACAT+GGG | - | chr3_1:82739471-82739490 | None:intergenic | 30.0% | |
| TAAAGCATAATTCTTCGACA+TGG | - | chr3_1:82739472-82739491 | None:intergenic | 30.0% | |
| !! | GATCATAAAAAGTATCGGAA+TGG | - | chr3_1:82739537-82739556 | None:intergenic | 30.0% |
| GGACATAAGTGTTATATGTT+TGG | + | chr3_1:82739584-82739603 | Msa0380770:intron | 30.0% | |
| TCTCAATTATATCGAGAGAT+TGG | + | chr3_1:82739693-82739712 | Msa0380770:intron | 30.0% | |
| !!! | ATCAATACAGGTTTTAGAGA+TGG | + | chr3_1:82739821-82739840 | Msa0380770:intron | 30.0% |
| AAGACCCTAGATAATGATAT+GGG | + | chr3_1:82739858-82739877 | Msa0380770:CDS | 30.0% | |
| CCTTAAAAAAGTCTTAACAG+TGG | - | chr3_1:82739889-82739908 | None:intergenic | 30.0% | |
| !!! | CCACTGTTAAGACTTTTTTA+AGG | + | chr3_1:82739886-82739905 | Msa0380770:CDS | 30.0% |
| TATTGTAGTTTCTGTGATAC+AGG | + | chr3_1:82739995-82740014 | Msa0380770:intron | 30.0% | |
| TTCATTGTCTATCTATGCTT+TGG | + | chr3_1:82740065-82740084 | Msa0380770:intron | 30.0% | |
| ! | TTTAAAGCCTGAAAGAAAGA+AGG | - | chr3_1:82740144-82740163 | None:intergenic | 30.0% |
| ! | TTGATGGTTCAATGCATTTA+TGG | + | chr3_1:82740381-82740400 | Msa0380770:intron | 30.0% |
| ATGATCTGTATATGTCAAGA+CGG | + | chr3_1:82740492-82740511 | Msa0380770:CDS | 30.0% | |
| !! | TTTTGGCTATTTCAATGACA+TGG | + | chr3_1:82740593-82740612 | Msa0380770:intron | 30.0% |
| ATTGTAACAGTTCAAATACG+TGG | + | chr3_1:82740625-82740644 | Msa0380770:intron | 30.0% | |
| ! | CACGTTTATTCATGTGATTT+TGG | - | chr3_1:82738859-82738878 | None:intergenic | 30.0% |
| ! | ATGAGATTGGTTGTTGAATT+GGG | - | chr3_1:82738899-82738918 | None:intergenic | 30.0% |
| ! | AATGAGATTGGTTGTTGAAT+TGG | - | chr3_1:82738900-82738919 | None:intergenic | 30.0% |
| TTATAAGCACTAGAAACAAC+TGG | - | chr3_1:82738989-82739008 | None:intergenic | 30.0% | |
| ATCCATAGAGGTAATCTTAT+GGG | + | chr3_1:82739018-82739037 | Msa0380770:intron | 30.0% | |
| ! | TGAGAGGAATATTGATTGAT+TGG | + | chr3_1:82739181-82739200 | Msa0380770:CDS | 30.0% |
| AAATTCAAATCGGACATAGA+AGG | - | chr3_1:82739355-82739374 | None:intergenic | 30.0% | |
| AAAGCATAATTCTTCGACAT+GGG | - | chr3_1:82739471-82739490 | None:intergenic | 30.0% | |
| TAAAGCATAATTCTTCGACA+TGG | - | chr3_1:82739472-82739491 | None:intergenic | 30.0% | |
| !! | GATCATAAAAAGTATCGGAA+TGG | - | chr3_1:82739537-82739556 | None:intergenic | 30.0% |
| GGACATAAGTGTTATATGTT+TGG | + | chr3_1:82739584-82739603 | Msa0380770:intron | 30.0% | |
| TCTCAATTATATCGAGAGAT+TGG | + | chr3_1:82739693-82739712 | Msa0380770:intron | 30.0% | |
| !!! | ATCAATACAGGTTTTAGAGA+TGG | + | chr3_1:82739821-82739840 | Msa0380770:intron | 30.0% |
| AAGACCCTAGATAATGATAT+GGG | + | chr3_1:82739858-82739877 | Msa0380770:CDS | 30.0% | |
| CCTTAAAAAAGTCTTAACAG+TGG | - | chr3_1:82739889-82739908 | None:intergenic | 30.0% | |
| !!! | CCACTGTTAAGACTTTTTTA+AGG | + | chr3_1:82739886-82739905 | Msa0380770:CDS | 30.0% |
| TATTGTAGTTTCTGTGATAC+AGG | + | chr3_1:82739995-82740014 | Msa0380770:intron | 30.0% | |
| TTCATTGTCTATCTATGCTT+TGG | + | chr3_1:82740065-82740084 | Msa0380770:intron | 30.0% | |
| ! | TTTAAAGCCTGAAAGAAAGA+AGG | - | chr3_1:82740144-82740163 | None:intergenic | 30.0% |
| ! | TTGATGGTTCAATGCATTTA+TGG | + | chr3_1:82740381-82740400 | Msa0380770:intron | 30.0% |
| ATGATCTGTATATGTCAAGA+CGG | + | chr3_1:82740492-82740511 | Msa0380770:CDS | 30.0% | |
| !! | TTTTGGCTATTTCAATGACA+TGG | + | chr3_1:82740593-82740612 | Msa0380770:intron | 30.0% |
| ATTGTAACAGTTCAAATACG+TGG | + | chr3_1:82740625-82740644 | Msa0380770:intron | 30.0% | |
| CGATTGAGAAACAATGAGAT+TGG | - | chr3_1:82738912-82738931 | None:intergenic | 35.0% | |
| !! | TGGAGCATCAAAGTTTTCAT+GGG | - | chr3_1:82738969-82738988 | None:intergenic | 35.0% |
| TAACTATCTTCGATCCATAG+AGG | + | chr3_1:82739006-82739025 | Msa0380770:CDS | 35.0% | |
| GATCCATAGAGGTAATCTTA+TGG | + | chr3_1:82739017-82739036 | Msa0380770:intron | 35.0% | |
| AAGACCAATGAAGGATTACA+TGG | + | chr3_1:82739128-82739147 | Msa0380770:CDS | 35.0% | |
| ATCTCCATGTAATCCTTCAT+TGG | - | chr3_1:82739135-82739154 | None:intergenic | 35.0% | |
| GACATTGATCCAAAAATGAG+AGG | + | chr3_1:82739165-82739184 | Msa0380770:CDS | 35.0% | |
| !! | TCGCTGTTTCTTACATAGAT+AGG | + | chr3_1:82739253-82739272 | Msa0380770:CDS | 35.0% |
| AAGCATAATTCTTCGACATG+GGG | - | chr3_1:82739470-82739489 | None:intergenic | 35.0% | |
| TAATACATACAACAGAGACG+AGG | + | chr3_1:82739499-82739518 | Msa0380770:intron | 35.0% | |
| TTTGGGTGCCTTAATAGTTT+GGG | + | chr3_1:82739602-82739621 | Msa0380770:intron | 35.0% | |
| AATTCCTGCCCAAACTATTA+AGG | - | chr3_1:82739613-82739632 | None:intergenic | 35.0% | |
| TGATTCCTTGTTAGTGTGTA+TGG | + | chr3_1:82739633-82739652 | Msa0380770:intron | 35.0% | |
| ! | GTTTTCCATACACACTAACA+AGG | - | chr3_1:82739641-82739660 | None:intergenic | 35.0% |
| CAAGACCCTAGATAATGATA+TGG | + | chr3_1:82739857-82739876 | Msa0380770:CDS | 35.0% | |
| ACTGCCCATATCATTATCTA+GGG | - | chr3_1:82739865-82739884 | None:intergenic | 35.0% | |
| TCTTGCTGAGCTAAGTTTAT+TGG | + | chr3_1:82740191-82740210 | Msa0380770:CDS | 35.0% | |
| ! | TGCTTGCTAGATTCATTGTT+TGG | + | chr3_1:82740265-82740284 | Msa0380770:intron | 35.0% |
| TATGATCAAATACTTGCCCA+GGG | - | chr3_1:82740303-82740322 | None:intergenic | 35.0% | |
| ATATGATCAAATACTTGCCC+AGG | - | chr3_1:82740304-82740323 | None:intergenic | 35.0% | |
| !! | GTATAAACCAGTTGAGTTGA+AGG | + | chr3_1:82740451-82740470 | Msa0380770:CDS | 35.0% |
| TGATCTGTATATGTCAAGAC+GGG | + | chr3_1:82740493-82740512 | Msa0380770:CDS | 35.0% | |
| AACAGATCACTTGGTAAATG+AGG | - | chr3_1:82740668-82740687 | None:intergenic | 35.0% | |
| CGATTGAGAAACAATGAGAT+TGG | - | chr3_1:82738912-82738931 | None:intergenic | 35.0% | |
| !! | TGGAGCATCAAAGTTTTCAT+GGG | - | chr3_1:82738969-82738988 | None:intergenic | 35.0% |
| TAACTATCTTCGATCCATAG+AGG | + | chr3_1:82739006-82739025 | Msa0380770:CDS | 35.0% | |
| GATCCATAGAGGTAATCTTA+TGG | + | chr3_1:82739017-82739036 | Msa0380770:intron | 35.0% | |
| AAGACCAATGAAGGATTACA+TGG | + | chr3_1:82739128-82739147 | Msa0380770:CDS | 35.0% | |
| ATCTCCATGTAATCCTTCAT+TGG | - | chr3_1:82739135-82739154 | None:intergenic | 35.0% | |
| GACATTGATCCAAAAATGAG+AGG | + | chr3_1:82739165-82739184 | Msa0380770:CDS | 35.0% | |
| !! | TCGCTGTTTCTTACATAGAT+AGG | + | chr3_1:82739253-82739272 | Msa0380770:CDS | 35.0% |
| AAGCATAATTCTTCGACATG+GGG | - | chr3_1:82739470-82739489 | None:intergenic | 35.0% | |
| TAATACATACAACAGAGACG+AGG | + | chr3_1:82739499-82739518 | Msa0380770:intron | 35.0% | |
| TTTGGGTGCCTTAATAGTTT+GGG | + | chr3_1:82739602-82739621 | Msa0380770:intron | 35.0% | |
| AATTCCTGCCCAAACTATTA+AGG | - | chr3_1:82739613-82739632 | None:intergenic | 35.0% | |
| TGATTCCTTGTTAGTGTGTA+TGG | + | chr3_1:82739633-82739652 | Msa0380770:intron | 35.0% | |
| ! | GTTTTCCATACACACTAACA+AGG | - | chr3_1:82739641-82739660 | None:intergenic | 35.0% |
| CAAGACCCTAGATAATGATA+TGG | + | chr3_1:82739857-82739876 | Msa0380770:CDS | 35.0% | |
| ACTGCCCATATCATTATCTA+GGG | - | chr3_1:82739865-82739884 | None:intergenic | 35.0% | |
| TCTTGCTGAGCTAAGTTTAT+TGG | + | chr3_1:82740191-82740210 | Msa0380770:CDS | 35.0% | |
| ! | TGCTTGCTAGATTCATTGTT+TGG | + | chr3_1:82740265-82740284 | Msa0380770:intron | 35.0% |
| TATGATCAAATACTTGCCCA+GGG | - | chr3_1:82740303-82740322 | None:intergenic | 35.0% | |
| ATATGATCAAATACTTGCCC+AGG | - | chr3_1:82740304-82740323 | None:intergenic | 35.0% | |
| !! | GTATAAACCAGTTGAGTTGA+AGG | + | chr3_1:82740451-82740470 | Msa0380770:CDS | 35.0% |
| TGATCTGTATATGTCAAGAC+GGG | + | chr3_1:82740493-82740512 | Msa0380770:CDS | 35.0% | |
| AACAGATCACTTGGTAAATG+AGG | - | chr3_1:82740668-82740687 | None:intergenic | 35.0% | |
| !!! | CATGTGATTTTGGGTTTCGT+TGG | - | chr3_1:82738849-82738868 | None:intergenic | 40.0% |
| CATGAATAAACGTGTCGTGT+TGG | + | chr3_1:82738865-82738884 | Msa0380770:CDS | 40.0% | |
| !! | CTGGAGCATCAAAGTTTTCA+TGG | - | chr3_1:82738970-82738989 | None:intergenic | 40.0% |
| GACCCATAAGATTACCTCTA+TGG | - | chr3_1:82739023-82739042 | None:intergenic | 40.0% | |
| GACAAAGAGAAGACCAATGA+AGG | + | chr3_1:82739119-82739138 | Msa0380770:CDS | 40.0% | |
| GAAGCTTGACCCTATTGATA+GGG | - | chr3_1:82739293-82739312 | None:intergenic | 40.0% | |
| TGAAGCTTGACCCTATTGAT+AGG | - | chr3_1:82739294-82739313 | None:intergenic | 40.0% | |
| TAGGGTCAAGCTTCAATTGT+TGG | + | chr3_1:82739299-82739318 | Msa0380770:CDS | 40.0% | |
| AGGGTCAAGCTTCAATTGTT+GGG | + | chr3_1:82739300-82739319 | Msa0380770:CDS | 40.0% | |
| ATAATTCTTCGACATGGGGT+GGG | - | chr3_1:82739466-82739485 | None:intergenic | 40.0% | |
| GTTTGGGTGCCTTAATAGTT+TGG | + | chr3_1:82739601-82739620 | Msa0380770:intron | 40.0% | |
| AGAGAGATCAACCCCTAAAA+AGG | + | chr3_1:82739669-82739688 | Msa0380770:intron | 40.0% | |
| GACTGCCCATATCATTATCT+AGG | - | chr3_1:82739866-82739885 | None:intergenic | 40.0% | |
| TGTAGTTTCTGTGATACAGG+AGG | + | chr3_1:82739998-82740017 | Msa0380770:intron | 40.0% | |
| !! | GACATTTCGAAAGCGTTGTT+AGG | + | chr3_1:82740087-82740106 | Msa0380770:intron | 40.0% |
| TGTGAGATTCTTGCCTTCTT+TGG | + | chr3_1:82740224-82740243 | Msa0380770:CDS | 40.0% | |
| ! | ATACCCAGAGTATTCTTGCA+GGG | - | chr3_1:82740435-82740454 | None:intergenic | 40.0% |
| ! | TATACCCAGAGTATTCTTGC+AGG | - | chr3_1:82740436-82740455 | None:intergenic | 40.0% |
| TGTATATGTCAAGACGGGAA+GGG | + | chr3_1:82740498-82740517 | Msa0380770:CDS | 40.0% | |
| ! | AAGGGTCATTTGAAGCTACT+CGG | + | chr3_1:82740516-82740535 | Msa0380770:CDS | 40.0% |
| GGAGAAATACAAGCAGTACA+AGG | + | chr3_1:82740538-82740557 | Msa0380770:CDS | 40.0% | |
| AGATCACTTGGTAAATGAGG+AGG | - | chr3_1:82740665-82740684 | None:intergenic | 40.0% | |
| !!! | CATGTGATTTTGGGTTTCGT+TGG | - | chr3_1:82738849-82738868 | None:intergenic | 40.0% |
| CATGAATAAACGTGTCGTGT+TGG | + | chr3_1:82738865-82738884 | Msa0380770:CDS | 40.0% | |
| !! | CTGGAGCATCAAAGTTTTCA+TGG | - | chr3_1:82738970-82738989 | None:intergenic | 40.0% |
| GACCCATAAGATTACCTCTA+TGG | - | chr3_1:82739023-82739042 | None:intergenic | 40.0% | |
| GACAAAGAGAAGACCAATGA+AGG | + | chr3_1:82739119-82739138 | Msa0380770:CDS | 40.0% | |
| GAAGCTTGACCCTATTGATA+GGG | - | chr3_1:82739293-82739312 | None:intergenic | 40.0% | |
| TGAAGCTTGACCCTATTGAT+AGG | - | chr3_1:82739294-82739313 | None:intergenic | 40.0% | |
| TAGGGTCAAGCTTCAATTGT+TGG | + | chr3_1:82739299-82739318 | Msa0380770:CDS | 40.0% | |
| AGGGTCAAGCTTCAATTGTT+GGG | + | chr3_1:82739300-82739319 | Msa0380770:CDS | 40.0% | |
| ATAATTCTTCGACATGGGGT+GGG | - | chr3_1:82739466-82739485 | None:intergenic | 40.0% | |
| GTTTGGGTGCCTTAATAGTT+TGG | + | chr3_1:82739601-82739620 | Msa0380770:intron | 40.0% | |
| AGAGAGATCAACCCCTAAAA+AGG | + | chr3_1:82739669-82739688 | Msa0380770:intron | 40.0% | |
| GACTGCCCATATCATTATCT+AGG | - | chr3_1:82739866-82739885 | None:intergenic | 40.0% | |
| TGTAGTTTCTGTGATACAGG+AGG | + | chr3_1:82739998-82740017 | Msa0380770:intron | 40.0% | |
| !! | GACATTTCGAAAGCGTTGTT+AGG | + | chr3_1:82740087-82740106 | Msa0380770:intron | 40.0% |
| TGTGAGATTCTTGCCTTCTT+TGG | + | chr3_1:82740224-82740243 | Msa0380770:CDS | 40.0% | |
| ! | ATACCCAGAGTATTCTTGCA+GGG | - | chr3_1:82740435-82740454 | None:intergenic | 40.0% |
| ! | TATACCCAGAGTATTCTTGC+AGG | - | chr3_1:82740436-82740455 | None:intergenic | 40.0% |
| TGTATATGTCAAGACGGGAA+GGG | + | chr3_1:82740498-82740517 | Msa0380770:CDS | 40.0% | |
| ! | AAGGGTCATTTGAAGCTACT+CGG | + | chr3_1:82740516-82740535 | Msa0380770:CDS | 40.0% |
| GGAGAAATACAAGCAGTACA+AGG | + | chr3_1:82740538-82740557 | Msa0380770:CDS | 40.0% | |
| AGATCACTTGGTAAATGAGG+AGG | - | chr3_1:82740665-82740684 | None:intergenic | 40.0% | |
| GGCTTACGATGCAATGTACA+TGG | - | chr3_1:82739334-82739353 | None:intergenic | 45.0% | |
| CATAATTCTTCGACATGGGG+TGG | - | chr3_1:82739467-82739486 | None:intergenic | 45.0% | |
| TTGGTCTCAGTAGTTGCGTT+TGG | + | chr3_1:82739712-82739731 | Msa0380770:intron | 45.0% | |
| TGGTCTCAGTAGTTGCGTTT+GGG | + | chr3_1:82739713-82739732 | Msa0380770:intron | 45.0% | |
| GAGATTCTTGCCTTCTTTGG+TGG | + | chr3_1:82740227-82740246 | Msa0380770:CDS | 45.0% | |
| TTTGGCCCAAAACTTATCCC+TGG | + | chr3_1:82740283-82740302 | Msa0380770:intron | 45.0% | |
| TTGGCCCAAAACTTATCCCT+GGG | + | chr3_1:82740284-82740303 | Msa0380770:intron | 45.0% | |
| ! | CTTGCCCAGGGATAAGTTTT+GGG | - | chr3_1:82740291-82740310 | None:intergenic | 45.0% |
| ! | ACTTGCCCAGGGATAAGTTT+TGG | - | chr3_1:82740292-82740311 | None:intergenic | 45.0% |
| ACGCATTCCTTCAACTCAAC+TGG | - | chr3_1:82740461-82740480 | None:intergenic | 45.0% | |
| CTGTATATGTCAAGACGGGA+AGG | + | chr3_1:82740497-82740516 | Msa0380770:CDS | 45.0% | |
| ! | AGGGTCATTTGAAGCTACTC+GGG | + | chr3_1:82740517-82740536 | Msa0380770:CDS | 45.0% |
| TTGGTAAATGAGGAGGCGAA+GGG | - | chr3_1:82740658-82740677 | None:intergenic | 45.0% | |
| GGCTTACGATGCAATGTACA+TGG | - | chr3_1:82739334-82739353 | None:intergenic | 45.0% | |
| CATAATTCTTCGACATGGGG+TGG | - | chr3_1:82739467-82739486 | None:intergenic | 45.0% | |
| TTGGTCTCAGTAGTTGCGTT+TGG | + | chr3_1:82739712-82739731 | Msa0380770:intron | 45.0% | |
| TGGTCTCAGTAGTTGCGTTT+GGG | + | chr3_1:82739713-82739732 | Msa0380770:intron | 45.0% | |
| GAGATTCTTGCCTTCTTTGG+TGG | + | chr3_1:82740227-82740246 | Msa0380770:CDS | 45.0% | |
| TTTGGCCCAAAACTTATCCC+TGG | + | chr3_1:82740283-82740302 | Msa0380770:intron | 45.0% | |
| TTGGCCCAAAACTTATCCCT+GGG | + | chr3_1:82740284-82740303 | Msa0380770:intron | 45.0% | |
| ! | CTTGCCCAGGGATAAGTTTT+GGG | - | chr3_1:82740291-82740310 | None:intergenic | 45.0% |
| ! | ACTTGCCCAGGGATAAGTTT+TGG | - | chr3_1:82740292-82740311 | None:intergenic | 45.0% |
| ACGCATTCCTTCAACTCAAC+TGG | - | chr3_1:82740461-82740480 | None:intergenic | 45.0% | |
| CTGTATATGTCAAGACGGGA+AGG | + | chr3_1:82740497-82740516 | Msa0380770:CDS | 45.0% | |
| ! | AGGGTCATTTGAAGCTACTC+GGG | + | chr3_1:82740517-82740536 | Msa0380770:CDS | 45.0% |
| TTGGTAAATGAGGAGGCGAA+GGG | - | chr3_1:82740658-82740677 | None:intergenic | 45.0% | |
| TTGAGACTCGCTCTGCAAAG+AGG | + | chr3_1:82738819-82738838 | Msa0380770:CDS | 50.0% | |
| GGTGCCTTAATAGTTTGGGC+AGG | + | chr3_1:82739606-82739625 | Msa0380770:intron | 50.0% | |
| GGTCTCAGTAGTTGCGTTTG+GGG | + | chr3_1:82739714-82739733 | Msa0380770:intron | 50.0% | |
| TCAGCCCTGCAAGAATACTC+TGG | + | chr3_1:82740428-82740447 | Msa0380770:CDS | 50.0% | |
| CAGCCCTGCAAGAATACTCT+GGG | + | chr3_1:82740429-82740448 | Msa0380770:CDS | 50.0% | |
| CTTGGTAAATGAGGAGGCGA+AGG | - | chr3_1:82740659-82740678 | None:intergenic | 50.0% | |
| TTGAGACTCGCTCTGCAAAG+AGG | + | chr3_1:82738819-82738838 | Msa0380770:CDS | 50.0% | |
| GGTGCCTTAATAGTTTGGGC+AGG | + | chr3_1:82739606-82739625 | Msa0380770:intron | 50.0% | |
| GGTCTCAGTAGTTGCGTTTG+GGG | + | chr3_1:82739714-82739733 | Msa0380770:intron | 50.0% | |
| TCAGCCCTGCAAGAATACTC+TGG | + | chr3_1:82740428-82740447 | Msa0380770:CDS | 50.0% | |
| CAGCCCTGCAAGAATACTCT+GGG | + | chr3_1:82740429-82740448 | Msa0380770:CDS | 50.0% | |
| CTTGGTAAATGAGGAGGCGA+AGG | - | chr3_1:82740659-82740678 | None:intergenic | 50.0% | |
| ATCGACGCAGCCACCAAAGA+AGG | - | chr3_1:82740240-82740259 | None:intergenic | 55.0% | |
| GTAAATGAGGAGGCGAAGGG+AGG | - | chr3_1:82740655-82740674 | None:intergenic | 55.0% | |
| ATCGACGCAGCCACCAAAGA+AGG | - | chr3_1:82740240-82740259 | None:intergenic | 55.0% | |
| GTAAATGAGGAGGCGAAGGG+AGG | - | chr3_1:82740655-82740674 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 82738815 | 82740691 | 82738815 | ID=Msa0380770;Name=Msa0380770 |
| chr3_1 | mRNA | 82738815 | 82740691 | 82738815 | ID=Msa0380770-mRNA-1;Parent=Msa0380770;Name=Msa0380770-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|0.83|0.85|7|0|295 |
| chr3_1 | exon | 82738815 | 82739027 | 82738815 | ID=Msa0380770-mRNA-1:exon:21094;Parent=Msa0380770-mRNA-1 |
| chr3_1 | exon | 82739114 | 82739346 | 82739114 | ID=Msa0380770-mRNA-1:exon:21095;Parent=Msa0380770-mRNA-1 |
| chr3_1 | exon | 82739445 | 82739472 | 82739445 | ID=Msa0380770-mRNA-1:exon:21096;Parent=Msa0380770-mRNA-1 |
| chr3_1 | exon | 82739831 | 82739926 | 82739831 | ID=Msa0380770-mRNA-1:exon:21097;Parent=Msa0380770-mRNA-1 |
| chr3_1 | exon | 82740156 | 82740281 | 82740156 | ID=Msa0380770-mRNA-1:exon:21098;Parent=Msa0380770-mRNA-1 |
| chr3_1 | exon | 82740425 | 82740559 | 82740425 | ID=Msa0380770-mRNA-1:exon:21099;Parent=Msa0380770-mRNA-1 |
| chr3_1 | exon | 82740635 | 82740691 | 82740635 | ID=Msa0380770-mRNA-1:exon:21100;Parent=Msa0380770-mRNA-1 |
| chr3_1 | CDS | 82738815 | 82739027 | 82738815 | ID=Msa0380770-mRNA-1:cds;Parent=Msa0380770-mRNA-1 |
| chr3_1 | CDS | 82739114 | 82739346 | 82739114 | ID=Msa0380770-mRNA-1:cds;Parent=Msa0380770-mRNA-1 |
| chr3_1 | CDS | 82739445 | 82739472 | 82739445 | ID=Msa0380770-mRNA-1:cds;Parent=Msa0380770-mRNA-1 |
| chr3_1 | CDS | 82739831 | 82739926 | 82739831 | ID=Msa0380770-mRNA-1:cds;Parent=Msa0380770-mRNA-1 |
| chr3_1 | CDS | 82740156 | 82740281 | 82740156 | ID=Msa0380770-mRNA-1:cds;Parent=Msa0380770-mRNA-1 |
| chr3_1 | CDS | 82740425 | 82740559 | 82740425 | ID=Msa0380770-mRNA-1:cds;Parent=Msa0380770-mRNA-1 |
| chr3_1 | CDS | 82740635 | 82740691 | 82740635 | ID=Msa0380770-mRNA-1:cds;Parent=Msa0380770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
