Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404800 | KEH35768.1 | 88.272 | 324 | 25 | 2 | 1 | 311 | 1 | 324 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404800 | sp|P25010|CCNAL_DAUCA | 51.376 | 327 | 123 | 6 | 20 | 311 | 13 | 338 | 4.74e-104 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404800 | A0A072V341 | 88.272 | 324 | 25 | 2 | 1 | 311 | 1 | 324 | 0.0 | 552 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0380770 | Msa0404800 | 0.825742 | 3.969918e-54 | -8.615850e-47 |
| Msa0404800 | Msa0500270 | 0.870696 | 1.200677e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404800 | MtrunA17_Chr3g0134441 | 85.714 | 329 | 29 | 3 | 1 | 311 | 1 | 329 | 0.0 | 538 |
| Msa0404800 | MtrunA17_Chr3g0134401 | 55.556 | 342 | 115 | 9 | 2 | 311 | 1 | 337 | 2.73e-116 | 338 |
| Msa0404800 | MtrunA17_Chr3g0134431 | 70.435 | 230 | 60 | 1 | 64 | 293 | 14 | 235 | 5.45e-114 | 330 |
| Msa0404800 | MtrunA17_Chr1g0152871 | 51.163 | 344 | 131 | 6 | 5 | 311 | 14 | 357 | 7.17e-114 | 333 |
| Msa0404800 | MtrunA17_Chr3g0134421 | 52.841 | 352 | 121 | 8 | 2 | 311 | 1 | 349 | 9.55e-112 | 327 |
| Msa0404800 | MtrunA17_Chr3g0134411 | 51.811 | 359 | 121 | 10 | 2 | 311 | 1 | 356 | 1.54e-110 | 325 |
| Msa0404800 | MtrunA17_Chr3g0125051 | 50.575 | 261 | 114 | 3 | 64 | 311 | 245 | 503 | 2.55e-82 | 257 |
| Msa0404800 | MtrunA17_Chr3g0138431 | 45.625 | 320 | 140 | 7 | 12 | 304 | 157 | 469 | 3.40e-77 | 243 |
| Msa0404800 | MtrunA17_Chr3g0125041 | 42.296 | 331 | 162 | 8 | 1 | 311 | 187 | 508 | 5.56e-76 | 241 |
| Msa0404800 | MtrunA17_Chr1g0148681 | 45.424 | 295 | 140 | 5 | 28 | 304 | 121 | 412 | 1.55e-73 | 232 |
| Msa0404800 | MtrunA17_Chr2g0332181 | 45.211 | 261 | 127 | 4 | 64 | 311 | 172 | 429 | 5.45e-67 | 215 |
| Msa0404800 | MtrunA17_Chr2g0332171 | 45.882 | 255 | 121 | 5 | 64 | 303 | 226 | 478 | 2.61e-66 | 215 |
| Msa0404800 | MtrunA17_Chr5g0441371 | 36.471 | 255 | 149 | 5 | 44 | 289 | 150 | 400 | 9.79e-42 | 149 |
| Msa0404800 | MtrunA17_Chr8g0370671 | 35.160 | 219 | 135 | 1 | 87 | 298 | 201 | 419 | 1.71e-41 | 149 |
| Msa0404800 | MtrunA17_Chr5g0406741 | 34.538 | 249 | 153 | 3 | 57 | 298 | 170 | 415 | 2.26e-40 | 145 |
| Msa0404800 | MtrunA17_Chr7g0255771 | 34.156 | 243 | 145 | 4 | 72 | 301 | 210 | 450 | 4.59e-39 | 143 |
| Msa0404800 | MtrunA17_Chr8g0357001 | 34.673 | 199 | 122 | 2 | 73 | 264 | 498 | 695 | 2.26e-30 | 120 |
| Msa0404800 | MtrunA17_Chr3g0102851 | 30.516 | 213 | 133 | 5 | 90 | 287 | 56 | 268 | 1.09e-17 | 81.6 |
| Msa0404800 | MtrunA17_Chr3g0103471 | 31.937 | 191 | 116 | 4 | 90 | 266 | 46 | 236 | 1.41e-17 | 81.3 |
| Msa0404800 | MtrunA17_Chr3g0102861 | 30.769 | 208 | 122 | 5 | 90 | 275 | 46 | 253 | 1.74e-17 | 80.9 |
| Msa0404800 | MtrunA17_Chr3g0102621 | 29.545 | 220 | 132 | 7 | 90 | 292 | 52 | 265 | 2.15e-16 | 77.8 |
| Msa0404800 | MtrunA17_Chr5g0418901 | 36.709 | 79 | 50 | 0 | 116 | 194 | 7 | 85 | 3.05e-13 | 64.7 |
| Msa0404800 | MtrunA17_Chr3g0102631 | 31.429 | 175 | 102 | 5 | 114 | 272 | 3 | 175 | 4.60e-12 | 64.3 |
| Msa0404800 | MtrunA17_Chr3g0102651 | 31.429 | 175 | 102 | 5 | 114 | 272 | 3 | 175 | 4.60e-12 | 64.3 |
| Msa0404800 | MtrunA17_Chr3g0102661 | 31.429 | 175 | 102 | 5 | 114 | 272 | 3 | 175 | 4.60e-12 | 64.3 |
| Msa0404800 | MtrunA17_Chr3g0102671 | 31.429 | 175 | 102 | 5 | 114 | 272 | 3 | 175 | 4.60e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404800 | AT5G43080.2 | 48.214 | 336 | 144 | 5 | 4 | 311 | 12 | 345 | 2.50e-105 | 311 |
| Msa0404800 | AT5G43080.1 | 48.538 | 342 | 139 | 7 | 4 | 311 | 12 | 350 | 2.74e-104 | 309 |
| Msa0404800 | AT1G47230.1 | 47.278 | 349 | 139 | 6 | 6 | 311 | 14 | 360 | 2.59e-103 | 307 |
| Msa0404800 | AT1G47230.2 | 47.143 | 350 | 139 | 7 | 6 | 311 | 14 | 361 | 1.72e-101 | 302 |
| Msa0404800 | AT1G47210.2 | 44.413 | 358 | 148 | 8 | 4 | 311 | 11 | 367 | 1.44e-96 | 290 |
| Msa0404800 | AT1G47220.1 | 49.481 | 289 | 126 | 4 | 42 | 311 | 34 | 321 | 3.90e-88 | 267 |
| Msa0404800 | AT1G44110.1 | 45.048 | 313 | 149 | 5 | 12 | 311 | 155 | 457 | 6.11e-78 | 245 |
| Msa0404800 | AT5G11300.1 | 52.209 | 249 | 106 | 3 | 73 | 308 | 184 | 432 | 1.36e-75 | 238 |
| Msa0404800 | AT5G25380.3 | 48.872 | 266 | 119 | 4 | 55 | 306 | 169 | 431 | 1.66e-72 | 230 |
| Msa0404800 | AT5G25380.1 | 48.872 | 266 | 119 | 4 | 55 | 306 | 169 | 431 | 1.66e-72 | 230 |
| Msa0404800 | AT5G25380.4 | 48.872 | 266 | 119 | 4 | 55 | 306 | 175 | 437 | 1.96e-72 | 230 |
| Msa0404800 | AT1G15570.1 | 48.361 | 244 | 113 | 2 | 73 | 303 | 200 | 443 | 6.45e-71 | 226 |
| Msa0404800 | AT1G80370.1 | 48.810 | 252 | 115 | 4 | 73 | 311 | 209 | 459 | 2.92e-70 | 225 |
| Msa0404800 | AT5G25380.2 | 48.617 | 253 | 113 | 4 | 55 | 293 | 169 | 418 | 1.51e-67 | 217 |
| Msa0404800 | AT1G77390.1 | 44.828 | 261 | 129 | 3 | 64 | 311 | 183 | 441 | 4.51e-66 | 214 |
| Msa0404800 | AT5G11300.2 | 57.222 | 180 | 72 | 2 | 73 | 247 | 184 | 363 | 8.68e-61 | 199 |
| Msa0404800 | AT5G06150.1 | 35.018 | 277 | 160 | 4 | 29 | 298 | 161 | 424 | 9.18e-43 | 153 |
| Msa0404800 | AT3G11520.1 | 40.179 | 224 | 126 | 2 | 87 | 303 | 183 | 405 | 9.90e-43 | 152 |
| Msa0404800 | AT4G37490.1 | 36.863 | 255 | 144 | 6 | 60 | 301 | 166 | 416 | 1.16e-41 | 149 |
| Msa0404800 | AT3G11520.2 | 43.229 | 192 | 102 | 1 | 87 | 271 | 183 | 374 | 1.62e-40 | 145 |
| Msa0404800 | AT2G26760.1 | 38.889 | 252 | 141 | 5 | 60 | 302 | 131 | 378 | 1.71e-39 | 143 |
| Msa0404800 | AT1G20610.1 | 35.160 | 219 | 135 | 1 | 87 | 298 | 202 | 420 | 6.81e-39 | 142 |
| Msa0404800 | AT1G76310.1 | 35.965 | 228 | 137 | 3 | 81 | 300 | 197 | 423 | 1.75e-38 | 141 |
| Msa0404800 | AT4G35620.1 | 38.197 | 233 | 136 | 2 | 81 | 306 | 192 | 423 | 1.19e-36 | 136 |
| Msa0404800 | AT2G17620.1 | 37.354 | 257 | 151 | 4 | 60 | 309 | 172 | 425 | 2.04e-36 | 135 |
| Msa0404800 | AT1G47210.1 | 41.209 | 182 | 71 | 5 | 4 | 149 | 11 | 192 | 2.93e-35 | 126 |
| Msa0404800 | AT1G16330.1 | 33.654 | 208 | 131 | 1 | 89 | 289 | 422 | 629 | 4.15e-34 | 132 |
| Msa0404800 | AT1G76310.2 | 38.983 | 177 | 106 | 2 | 81 | 256 | 197 | 372 | 1.14e-33 | 127 |
| Msa0404800 | AT4G35620.2 | 43.503 | 177 | 99 | 1 | 81 | 257 | 192 | 367 | 1.93e-33 | 126 |
| Msa0404800 | AT1G76310.3 | 32.031 | 256 | 137 | 4 | 81 | 300 | 197 | 451 | 1.20e-32 | 125 |
| Msa0404800 | AT5G06150.2 | 38.596 | 171 | 92 | 3 | 29 | 199 | 161 | 318 | 5.63e-29 | 114 |
| Msa0404800 | AT1G76310.4 | 40.559 | 143 | 81 | 3 | 60 | 201 | 178 | 317 | 1.65e-25 | 104 |
| Msa0404800 | AT1G20590.1 | 35.762 | 151 | 90 | 1 | 123 | 266 | 66 | 216 | 4.18e-23 | 96.7 |
| Msa0404800 | AT1G14750.4 | 31.193 | 218 | 134 | 6 | 65 | 267 | 184 | 400 | 3.80e-16 | 79.0 |
| Msa0404800 | AT1G14750.2 | 30.275 | 218 | 137 | 5 | 65 | 267 | 184 | 401 | 4.39e-16 | 78.6 |
| Msa0404800 | AT1G14750.3 | 29.864 | 221 | 140 | 5 | 65 | 270 | 352 | 572 | 4.50e-16 | 79.0 |
| Msa0404800 | AT1G14750.1 | 30.275 | 218 | 137 | 5 | 65 | 267 | 352 | 569 | 7.75e-16 | 78.2 |
| Msa0404800 | AT1G34460.9 | 30.481 | 187 | 96 | 5 | 13 | 199 | 222 | 374 | 6.19e-15 | 75.5 |
| Msa0404800 | AT1G34460.6 | 30.481 | 187 | 96 | 5 | 13 | 199 | 236 | 388 | 6.96e-15 | 75.5 |
| Msa0404800 | AT1G34460.3 | 30.481 | 187 | 96 | 5 | 13 | 199 | 236 | 388 | 6.96e-15 | 75.5 |
| Msa0404800 | AT1G34460.8 | 30.481 | 187 | 96 | 5 | 13 | 199 | 236 | 388 | 6.96e-15 | 75.5 |
| Msa0404800 | AT1G34460.1 | 30.481 | 187 | 96 | 5 | 13 | 199 | 236 | 388 | 6.96e-15 | 75.5 |
| Msa0404800 | AT1G34460.5 | 30.481 | 187 | 96 | 5 | 13 | 199 | 236 | 388 | 7.11e-15 | 75.5 |
| Msa0404800 | AT1G34460.7 | 30.481 | 187 | 96 | 5 | 13 | 199 | 236 | 388 | 8.45e-15 | 75.1 |
| Msa0404800 | AT1G34460.2 | 31.579 | 171 | 84 | 4 | 29 | 199 | 248 | 385 | 3.75e-14 | 73.2 |
| Msa0404800 | AT1G34460.4 | 31.579 | 171 | 84 | 4 | 29 | 199 | 248 | 385 | 3.75e-14 | 73.2 |
Find 57 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCTGAGCTAAGTTTAT+TGG | 0.148419 | 3_2:-37514922 | Msa0404800:CDS |
| CACGTTTATTCATGTGATTT+TGG | 0.168414 | 3_2:+37516258 | None:intergenic |
| TGTGAGATTCTTGCCTTCTT+TGG | 0.236242 | 3_2:-37514889 | Msa0404800:CDS |
| TCGCTGTTTCTTACATAGAT+AGG | 0.328623 | 3_2:-37515857 | Msa0404800:CDS |
| TGAGAGGAATATTGATTGAT+TGG | 0.331773 | 3_2:-37515929 | Msa0404800:CDS |
| CAAGACCCTAGATAATGATA+TGG | 0.336031 | 3_2:-37515253 | Msa0404800:CDS |
| TGAAGCTTGACCCTATTGAT+AGG | 0.352654 | 3_2:+37515819 | None:intergenic |
| AATGAGATTGGTTGGTGAAT+TGG | 0.355919 | 3_2:+37516217 | None:intergenic |
| ATGAGATTGGTTGGTGAATT+GGG | 0.379474 | 3_2:+37516218 | None:intergenic |
| TATACCCAGAGTATTCTTGC+AGG | 0.389030 | 3_2:+37514680 | None:intergenic |
| ACGCATTCCTTCAACTCAAC+TGG | 0.389273 | 3_2:+37514655 | None:intergenic |
| CGATTGAGAAACAATGAGAT+TGG | 0.404565 | 3_2:+37516205 | None:intergenic |
| GACTGCCCATATCATTATCT+AGG | 0.425727 | 3_2:+37515247 | None:intergenic |
| AAGTAATTAATAAACAGATT+TGG | 0.433677 | 3_2:+37515191 | None:intergenic |
| TAGGGTCAAGCTTCAATTGT+TGG | 0.434090 | 3_2:-37515811 | Msa0404800:CDS |
| GAGATTCTTGCCTTCTTTGG+TGG | 0.445209 | 3_2:-37514886 | Msa0404800:CDS |
| ATCTCCATGTAATCCTTCAT+TGG | 0.446797 | 3_2:+37515978 | None:intergenic |
| TTATAAGCACTAGAAACAAC+TGG | 0.474116 | 3_2:+37516128 | None:intergenic |
| AGGGTCAAGCTTCAATTGTT+GGG | 0.475156 | 3_2:-37515810 | Msa0404800:CDS |
| GTATAAACCAGTTGAGTTGA+AGG | 0.485366 | 3_2:-37514662 | Msa0404800:CDS |
| ATGAATAAACGTGTCGTGTT+GGG | 0.485891 | 3_2:-37516248 | Msa0404800:CDS |
| ATCGACGCAGCCACCAAAGA+AGG | 0.504235 | 3_2:+37514876 | None:intergenic |
| AAAGCATAATTCTTCGACAT+GGG | 0.505661 | 3_2:+37515642 | None:intergenic |
| AACAGATCACTTGGTAAATG+AGG | 0.505822 | 3_2:+37514448 | None:intergenic |
| AAGGGTCATTTGAAGCTACT+CGG | 0.518059 | 3_2:-37514597 | Msa0404800:CDS |
| TCAGCCCTGCAAGAATACTC+TGG | 0.519125 | 3_2:-37514685 | Msa0404800:CDS |
| CATAATTCTTCGACATGGGG+TGG | 0.521855 | 3_2:+37515646 | None:intergenic |
| GGCTTACGATGCAATGTACA+TGG | 0.535999 | 3_2:+37515779 | None:intergenic |
| GACAAAGAGAAGACCAATGA+AGG | 0.540350 | 3_2:-37515991 | Msa0404800:CDS |
| GAAGCTTGACCCTATTGATA+GGG | 0.540822 | 3_2:+37515820 | None:intergenic |
| AAGACCCTAGATAATGATAT+GGG | 0.542783 | 3_2:-37515252 | Msa0404800:CDS |
| AAGACCAATGAAGGATTACA+TGG | 0.547107 | 3_2:-37515982 | Msa0404800:CDS |
| CTTGGTAAATGAGGAGGCGA+AGG | 0.552246 | 3_2:+37514457 | None:intergenic |
| GACCCATAAGATTACCTCCA+TGG | 0.557990 | 3_2:+37516094 | None:intergenic |
| CTGTATATGTCAAGACGGGA+AGG | 0.561150 | 3_2:-37514616 | Msa0404800:CDS |
| TCAAATTAAAACAGATCACT+TGG | 0.561830 | 3_2:+37514439 | None:intergenic |
| CATGAATAAACGTGTCGTGT+TGG | 0.569019 | 3_2:-37516249 | Msa0404800:CDS |
| CAGCCCTGCAAGAATACTCT+GGG | 0.579144 | 3_2:-37514684 | Msa0404800:CDS |
| TGAGAAACAATGAGATTGGT+TGG | 0.581513 | 3_2:+37516209 | None:intergenic |
| TTATAACTATCTTCGATCCA+TGG | 0.584174 | 3_2:-37516111 | Msa0404800:CDS |
| ATAATTCTTCGACATGGGGT+GGG | 0.585139 | 3_2:+37515647 | None:intergenic |
| AGGGTCATTTGAAGCTACTC+GGG | 0.585830 | 3_2:-37514596 | Msa0404800:CDS |
| ATGATCTGTATATGTCAAGA+CGG | 0.591093 | 3_2:-37514621 | Msa0404800:CDS |
| TGATCTGTATATGTCAAGAC+GGG | 0.596030 | 3_2:-37514620 | Msa0404800:CDS |
| ATACCCAGAGTATTCTTGCA+GGG | 0.596799 | 3_2:+37514681 | None:intergenic |
| ACTGCCCATATCATTATCTA+GGG | 0.603439 | 3_2:+37515248 | None:intergenic |
| GGAGAAATACAAGCAGTACA+AGG | 0.603442 | 3_2:-37514575 | Msa0404800:intron |
| TAAAGCATAATTCTTCGACA+TGG | 0.621082 | 3_2:+37515641 | None:intergenic |
| AAGCATAATTCTTCGACATG+GGG | 0.631386 | 3_2:+37515643 | None:intergenic |
| AGATCACTTGGTAAATGAGG+AGG | 0.642418 | 3_2:+37514451 | None:intergenic |
| TTGGTAAATGAGGAGGCGAA+GGG | 0.642726 | 3_2:+37514458 | None:intergenic |
| TTGAGACTCGCTCTGCAAAG+AGG | 0.648697 | 3_2:-37516295 | Msa0404800:CDS |
| TGTATATGTCAAGACGGGAA+GGG | 0.652672 | 3_2:-37514615 | Msa0404800:CDS |
| GTAAATGAGGAGGCGAAGGG+AGG | 0.656266 | 3_2:+37514461 | None:intergenic |
| ATTGTAACAGTTCAAATACG+TGG | 0.709700 | 3_2:-37514488 | Msa0404800:intron |
| TAACTATCTTCGATCCATGG+AGG | 0.713647 | 3_2:-37516108 | Msa0404800:intron |
| TAATACATACAACAGAGACG+AGG | 0.764399 | 3_2:-37515611 | Msa0404800:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATTTAAAAAAAAAA+AGG | + | chr3_2:37514699-37514718 | None:intergenic | 0.0% |
| !!! | TTTAAAATTTAAAAAAAAAA+AGG | + | chr3_2:37514699-37514718 | None:intergenic | 0.0% |
| !! | ATTATTTGCAAAATTCAAAT+CGG | + | chr3_2:37514998-37515017 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTCGATTATAAA+AGG | - | chr3_2:37515056-37515075 | Msa0404800:intron | 15.0% |
| !!! | AACAAATTTAAATCTTCTTT+TGG | + | chr3_2:37515386-37515405 | None:intergenic | 15.0% |
| !! | AAGTAATTAATAAACAGATT+TGG | + | chr3_2:37515555-37515574 | None:intergenic | 15.0% |
| !! | ATTATTTGCAAAATTCAAAT+CGG | + | chr3_2:37514998-37515017 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTCGATTATAAA+AGG | - | chr3_2:37515056-37515075 | Msa0404800:intron | 15.0% |
| !!! | AACAAATTTAAATCTTCTTT+TGG | + | chr3_2:37515386-37515405 | None:intergenic | 15.0% |
| !! | AAGTAATTAATAAACAGATT+TGG | + | chr3_2:37515555-37515574 | None:intergenic | 15.0% |
| !!! | GAGATTTGATTTTTTTTAGA+TGG | - | chr3_2:37514728-37514747 | Msa0404800:intron | 20.0% |
| !!! | TTTCAGATCATAAAAAGTAT+CGG | + | chr3_2:37515175-37515194 | None:intergenic | 20.0% |
| !!! | TATAATTGAGATCCTTTTTA+GGG | + | chr3_2:37515317-37515336 | None:intergenic | 20.0% |
| !!! | ATATAATTGAGATCCTTTTT+AGG | + | chr3_2:37515318-37515337 | None:intergenic | 20.0% |
| !! | GTATTTGATCATATAGTTAA+TGG | - | chr3_2:37515940-37515959 | Msa0404800:CDS | 20.0% |
| !! | TATTACCAAATTAACATAGA+TGG | - | chr3_2:37515988-37516007 | Msa0404800:CDS | 20.0% |
| !!! | GAGATTTGATTTTTTTTAGA+TGG | - | chr3_2:37514728-37514747 | Msa0404800:intron | 20.0% |
| !!! | TTTCAGATCATAAAAAGTAT+CGG | + | chr3_2:37515175-37515194 | None:intergenic | 20.0% |
| !!! | TATAATTGAGATCCTTTTTA+GGG | + | chr3_2:37515317-37515336 | None:intergenic | 20.0% |
| !!! | ATATAATTGAGATCCTTTTT+AGG | + | chr3_2:37515318-37515337 | None:intergenic | 20.0% |
| !! | GTATTTGATCATATAGTTAA+TGG | - | chr3_2:37515940-37515959 | Msa0404800:CDS | 20.0% |
| !! | TATTACCAAATTAACATAGA+TGG | - | chr3_2:37515988-37516007 | Msa0404800:CDS | 20.0% |
| !! | ACGTTTATTCATGTGATTTT+GGG | + | chr3_2:37514487-37514506 | None:intergenic | 25.0% |
| !! | ATCAATATTCCTCTCATTTT+TGG | + | chr3_2:37514810-37514829 | None:intergenic | 25.0% |
| ! | TATTGATAGGGTAAAAAGAT+AGG | + | chr3_2:37514914-37514933 | None:intergenic | 25.0% |
| !! | TATCTTTTTACCCTATCAAT+AGG | - | chr3_2:37514913-37514932 | Msa0404800:CDS | 25.0% |
| !! | ATCTTTTTACCCTATCAATA+GGG | - | chr3_2:37514914-37514933 | Msa0404800:CDS | 25.0% |
| ! | TAGTGAAATTATCAACATAG+TGG | - | chr3_2:37515195-37515214 | Msa0404800:intron | 25.0% |
| ! | AGTGAAATTATCAACATAGT+GGG | - | chr3_2:37515196-37515215 | Msa0404800:intron | 25.0% |
| ! | GACATAAGTGTTATATGTTT+GGG | - | chr3_2:37515218-37515237 | Msa0404800:CDS | 25.0% |
| !! | ATAATTGAGATCCTTTTTAG+GGG | + | chr3_2:37515316-37515335 | None:intergenic | 25.0% |
| !! | AATCTTCTTTTGGTAAACTA+AGG | + | chr3_2:37515376-37515395 | None:intergenic | 25.0% |
| ! | AAACAAGAGAAGCAAAATAA+GGG | + | chr3_2:37515428-37515447 | None:intergenic | 25.0% |
| ! | TAAACAAGAGAAGCAAAATA+AGG | + | chr3_2:37515429-37515448 | None:intergenic | 25.0% |
| ! | TTGTTTATTGCTATCAATAC+AGG | - | chr3_2:37515442-37515461 | Msa0404800:intron | 25.0% |
| ! | CTTAAAAAAGTCTTAACAGT+GGG | + | chr3_2:37515521-37515540 | None:intergenic | 25.0% |
| ! | TAAGAAGAAAAATGTGAGTT+AGG | - | chr3_2:37515671-37515690 | Msa0404800:intron | 25.0% |
| !! | TTATTTTCCTTCTTTCTTTC+AGG | - | chr3_2:37515764-37515783 | Msa0404800:intron | 25.0% |
| ! | ATCAACCATCTATGTTAATT+TGG | + | chr3_2:37515996-37516015 | None:intergenic | 25.0% |
| ! | AAATTAACATAGATGGTTGA+TGG | - | chr3_2:37515995-37516014 | Msa0404800:CDS | 25.0% |
| !!! | ACATTCCTTAGACTTTATTT+TGG | - | chr3_2:37516206-37516225 | Msa0404800:CDS | 25.0% |
| ! | AATAGCCAAAATAAAGTCTA+AGG | + | chr3_2:37516214-37516233 | None:intergenic | 25.0% |
| !! | ACGTTTATTCATGTGATTTT+GGG | + | chr3_2:37514487-37514506 | None:intergenic | 25.0% |
| !! | ATCAATATTCCTCTCATTTT+TGG | + | chr3_2:37514810-37514829 | None:intergenic | 25.0% |
| ! | TATTGATAGGGTAAAAAGAT+AGG | + | chr3_2:37514914-37514933 | None:intergenic | 25.0% |
| !! | TATCTTTTTACCCTATCAAT+AGG | - | chr3_2:37514913-37514932 | Msa0404800:CDS | 25.0% |
| !! | ATCTTTTTACCCTATCAATA+GGG | - | chr3_2:37514914-37514933 | Msa0404800:CDS | 25.0% |
| ! | TAGTGAAATTATCAACATAG+TGG | - | chr3_2:37515195-37515214 | Msa0404800:intron | 25.0% |
| ! | AGTGAAATTATCAACATAGT+GGG | - | chr3_2:37515196-37515215 | Msa0404800:intron | 25.0% |
| ! | GACATAAGTGTTATATGTTT+GGG | - | chr3_2:37515218-37515237 | Msa0404800:CDS | 25.0% |
| !! | ATAATTGAGATCCTTTTTAG+GGG | + | chr3_2:37515316-37515335 | None:intergenic | 25.0% |
| !! | AATCTTCTTTTGGTAAACTA+AGG | + | chr3_2:37515376-37515395 | None:intergenic | 25.0% |
| ! | AAACAAGAGAAGCAAAATAA+GGG | + | chr3_2:37515428-37515447 | None:intergenic | 25.0% |
| ! | TAAACAAGAGAAGCAAAATA+AGG | + | chr3_2:37515429-37515448 | None:intergenic | 25.0% |
| ! | TTGTTTATTGCTATCAATAC+AGG | - | chr3_2:37515442-37515461 | Msa0404800:intron | 25.0% |
| ! | CTTAAAAAAGTCTTAACAGT+GGG | + | chr3_2:37515521-37515540 | None:intergenic | 25.0% |
| ! | TAAGAAGAAAAATGTGAGTT+AGG | - | chr3_2:37515671-37515690 | Msa0404800:intron | 25.0% |
| !! | TTATTTTCCTTCTTTCTTTC+AGG | - | chr3_2:37515764-37515783 | Msa0404800:intron | 25.0% |
| ! | ATCAACCATCTATGTTAATT+TGG | + | chr3_2:37515996-37516015 | None:intergenic | 25.0% |
| ! | AAATTAACATAGATGGTTGA+TGG | - | chr3_2:37515995-37516014 | Msa0404800:CDS | 25.0% |
| !!! | ACATTCCTTAGACTTTATTT+TGG | - | chr3_2:37516206-37516225 | Msa0404800:CDS | 25.0% |
| ! | AATAGCCAAAATAAAGTCTA+AGG | + | chr3_2:37516214-37516233 | None:intergenic | 25.0% |
| ! | CACGTTTATTCATGTGATTT+TGG | + | chr3_2:37514488-37514507 | None:intergenic | 30.0% |
| TTATAAGCACTAGAAACAAC+TGG | + | chr3_2:37514618-37514637 | None:intergenic | 30.0% | |
| TTATAACTATCTTCGATCCA+TGG | - | chr3_2:37514632-37514651 | Msa0404800:CDS | 30.0% | |
| ! | TGAGAGGAATATTGATTGAT+TGG | - | chr3_2:37514814-37514833 | Msa0404800:intron | 30.0% |
| AAATTCAAATCGGACATAGA+AGG | + | chr3_2:37514988-37515007 | None:intergenic | 30.0% | |
| AAAGCATAATTCTTCGACAT+GGG | + | chr3_2:37515104-37515123 | None:intergenic | 30.0% | |
| TAAAGCATAATTCTTCGACA+TGG | + | chr3_2:37515105-37515124 | None:intergenic | 30.0% | |
| !! | GATCATAAAAAGTATCGGAA+TGG | + | chr3_2:37515170-37515189 | None:intergenic | 30.0% |
| GGACATAAGTGTTATATGTT+TGG | - | chr3_2:37515217-37515236 | Msa0404800:CDS | 30.0% | |
| TCTCAATTATATCGAGAGAT+TGG | - | chr3_2:37515326-37515345 | Msa0404800:intron | 30.0% | |
| !!! | ATCAATACAGGTTTTAGAGA+TGG | - | chr3_2:37515454-37515473 | Msa0404800:intron | 30.0% |
| AAGACCCTAGATAATGATAT+GGG | - | chr3_2:37515491-37515510 | Msa0404800:intron | 30.0% | |
| CCTTAAAAAAGTCTTAACAG+TGG | + | chr3_2:37515522-37515541 | None:intergenic | 30.0% | |
| !!! | CCACTGTTAAGACTTTTTTA+AGG | - | chr3_2:37515519-37515538 | Msa0404800:intron | 30.0% |
| TATTGTAGTTTCTGTGATAC+AGG | - | chr3_2:37515628-37515647 | Msa0404800:CDS | 30.0% | |
| TTCATTGTCTATCTATGCTT+TGG | - | chr3_2:37515698-37515717 | Msa0404800:intron | 30.0% | |
| ! | TTTAAAGCCTGAAAGAAAGA+AGG | + | chr3_2:37515774-37515793 | None:intergenic | 30.0% |
| ! | TTGATGGTTCAATGCATTTA+TGG | - | chr3_2:37516011-37516030 | Msa0404800:intron | 30.0% |
| ATGATCTGTATATGTCAAGA+CGG | - | chr3_2:37516122-37516141 | Msa0404800:CDS | 30.0% | |
| !! | TTTTGGCTATTTCAATGACA+TGG | - | chr3_2:37516223-37516242 | Msa0404800:CDS | 30.0% |
| ATTGTAACAGTTCAAATACG+TGG | - | chr3_2:37516255-37516274 | Msa0404800:CDS | 30.0% | |
| ! | CACGTTTATTCATGTGATTT+TGG | + | chr3_2:37514488-37514507 | None:intergenic | 30.0% |
| TTATAAGCACTAGAAACAAC+TGG | + | chr3_2:37514618-37514637 | None:intergenic | 30.0% | |
| TTATAACTATCTTCGATCCA+TGG | - | chr3_2:37514632-37514651 | Msa0404800:CDS | 30.0% | |
| ! | TGAGAGGAATATTGATTGAT+TGG | - | chr3_2:37514814-37514833 | Msa0404800:intron | 30.0% |
| AAATTCAAATCGGACATAGA+AGG | + | chr3_2:37514988-37515007 | None:intergenic | 30.0% | |
| AAAGCATAATTCTTCGACAT+GGG | + | chr3_2:37515104-37515123 | None:intergenic | 30.0% | |
| TAAAGCATAATTCTTCGACA+TGG | + | chr3_2:37515105-37515124 | None:intergenic | 30.0% | |
| !! | GATCATAAAAAGTATCGGAA+TGG | + | chr3_2:37515170-37515189 | None:intergenic | 30.0% |
| GGACATAAGTGTTATATGTT+TGG | - | chr3_2:37515217-37515236 | Msa0404800:CDS | 30.0% | |
| TCTCAATTATATCGAGAGAT+TGG | - | chr3_2:37515326-37515345 | Msa0404800:intron | 30.0% | |
| !!! | ATCAATACAGGTTTTAGAGA+TGG | - | chr3_2:37515454-37515473 | Msa0404800:intron | 30.0% |
| AAGACCCTAGATAATGATAT+GGG | - | chr3_2:37515491-37515510 | Msa0404800:intron | 30.0% | |
| CCTTAAAAAAGTCTTAACAG+TGG | + | chr3_2:37515522-37515541 | None:intergenic | 30.0% | |
| !!! | CCACTGTTAAGACTTTTTTA+AGG | - | chr3_2:37515519-37515538 | Msa0404800:intron | 30.0% |
| TATTGTAGTTTCTGTGATAC+AGG | - | chr3_2:37515628-37515647 | Msa0404800:CDS | 30.0% | |
| TTCATTGTCTATCTATGCTT+TGG | - | chr3_2:37515698-37515717 | Msa0404800:intron | 30.0% | |
| ! | TTTAAAGCCTGAAAGAAAGA+AGG | + | chr3_2:37515774-37515793 | None:intergenic | 30.0% |
| ! | TTGATGGTTCAATGCATTTA+TGG | - | chr3_2:37516011-37516030 | Msa0404800:intron | 30.0% |
| ATGATCTGTATATGTCAAGA+CGG | - | chr3_2:37516122-37516141 | Msa0404800:CDS | 30.0% | |
| !! | TTTTGGCTATTTCAATGACA+TGG | - | chr3_2:37516223-37516242 | Msa0404800:CDS | 30.0% |
| ATTGTAACAGTTCAAATACG+TGG | - | chr3_2:37516255-37516274 | Msa0404800:CDS | 30.0% | |
| ATGAATAAACGTGTCGTGTT+GGG | - | chr3_2:37514495-37514514 | Msa0404800:intron | 35.0% | |
| !! | ATGAGATTGGTTGGTGAATT+GGG | + | chr3_2:37514528-37514547 | None:intergenic | 35.0% |
| !! | AATGAGATTGGTTGGTGAAT+TGG | + | chr3_2:37514529-37514548 | None:intergenic | 35.0% |
| TGAGAAACAATGAGATTGGT+TGG | + | chr3_2:37514537-37514556 | None:intergenic | 35.0% | |
| CGATTGAGAAACAATGAGAT+TGG | + | chr3_2:37514541-37514560 | None:intergenic | 35.0% | |
| !! | TGGAGCATCAAAGTTTTCAT+GGG | + | chr3_2:37514598-37514617 | None:intergenic | 35.0% |
| ATCCATGGAGGTAATCTTAT+GGG | - | chr3_2:37514647-37514666 | Msa0404800:CDS | 35.0% | |
| AAGACCAATGAAGGATTACA+TGG | - | chr3_2:37514761-37514780 | Msa0404800:intron | 35.0% | |
| ATCTCCATGTAATCCTTCAT+TGG | + | chr3_2:37514768-37514787 | None:intergenic | 35.0% | |
| GACATTGATCCAAAAATGAG+AGG | - | chr3_2:37514798-37514817 | Msa0404800:intron | 35.0% | |
| !! | TCGCTGTTTCTTACATAGAT+AGG | - | chr3_2:37514886-37514905 | Msa0404800:CDS | 35.0% |
| AAGCATAATTCTTCGACATG+GGG | + | chr3_2:37515103-37515122 | None:intergenic | 35.0% | |
| TAATACATACAACAGAGACG+AGG | - | chr3_2:37515132-37515151 | Msa0404800:intron | 35.0% | |
| TTTGGGTGCCTTAATAGTTT+GGG | - | chr3_2:37515235-37515254 | Msa0404800:CDS | 35.0% | |
| AATTCCTGCCCAAACTATTA+AGG | + | chr3_2:37515246-37515265 | None:intergenic | 35.0% | |
| TGATTCCTTGTTAGTGTGTA+TGG | - | chr3_2:37515266-37515285 | Msa0404800:CDS | 35.0% | |
| ! | GTTTTCCATACACACTAACA+AGG | + | chr3_2:37515274-37515293 | None:intergenic | 35.0% |
| CAAGACCCTAGATAATGATA+TGG | - | chr3_2:37515490-37515509 | Msa0404800:intron | 35.0% | |
| ACTGCCCATATCATTATCTA+GGG | + | chr3_2:37515498-37515517 | None:intergenic | 35.0% | |
| TCTTGCTGAGCTAAGTTTAT+TGG | - | chr3_2:37515821-37515840 | Msa0404800:CDS | 35.0% | |
| ! | TGCTTGCTAGATTCATTGTT+TGG | - | chr3_2:37515895-37515914 | Msa0404800:CDS | 35.0% |
| TATGATCAAATACTTGCCCA+GGG | + | chr3_2:37515933-37515952 | None:intergenic | 35.0% | |
| ATATGATCAAATACTTGCCC+AGG | + | chr3_2:37515934-37515953 | None:intergenic | 35.0% | |
| !! | GTATAAACCAGTTGAGTTGA+AGG | - | chr3_2:37516081-37516100 | Msa0404800:intron | 35.0% |
| TGATCTGTATATGTCAAGAC+GGG | - | chr3_2:37516123-37516142 | Msa0404800:CDS | 35.0% | |
| AACAGATCACTTGGTAAATG+AGG | + | chr3_2:37516298-37516317 | None:intergenic | 35.0% | |
| ATGAATAAACGTGTCGTGTT+GGG | - | chr3_2:37514495-37514514 | Msa0404800:intron | 35.0% | |
| !! | ATGAGATTGGTTGGTGAATT+GGG | + | chr3_2:37514528-37514547 | None:intergenic | 35.0% |
| !! | AATGAGATTGGTTGGTGAAT+TGG | + | chr3_2:37514529-37514548 | None:intergenic | 35.0% |
| TGAGAAACAATGAGATTGGT+TGG | + | chr3_2:37514537-37514556 | None:intergenic | 35.0% | |
| CGATTGAGAAACAATGAGAT+TGG | + | chr3_2:37514541-37514560 | None:intergenic | 35.0% | |
| !! | TGGAGCATCAAAGTTTTCAT+GGG | + | chr3_2:37514598-37514617 | None:intergenic | 35.0% |
| ATCCATGGAGGTAATCTTAT+GGG | - | chr3_2:37514647-37514666 | Msa0404800:CDS | 35.0% | |
| AAGACCAATGAAGGATTACA+TGG | - | chr3_2:37514761-37514780 | Msa0404800:intron | 35.0% | |
| ATCTCCATGTAATCCTTCAT+TGG | + | chr3_2:37514768-37514787 | None:intergenic | 35.0% | |
| GACATTGATCCAAAAATGAG+AGG | - | chr3_2:37514798-37514817 | Msa0404800:intron | 35.0% | |
| !! | TCGCTGTTTCTTACATAGAT+AGG | - | chr3_2:37514886-37514905 | Msa0404800:CDS | 35.0% |
| AAGCATAATTCTTCGACATG+GGG | + | chr3_2:37515103-37515122 | None:intergenic | 35.0% | |
| TAATACATACAACAGAGACG+AGG | - | chr3_2:37515132-37515151 | Msa0404800:intron | 35.0% | |
| TTTGGGTGCCTTAATAGTTT+GGG | - | chr3_2:37515235-37515254 | Msa0404800:CDS | 35.0% | |
| AATTCCTGCCCAAACTATTA+AGG | + | chr3_2:37515246-37515265 | None:intergenic | 35.0% | |
| TGATTCCTTGTTAGTGTGTA+TGG | - | chr3_2:37515266-37515285 | Msa0404800:CDS | 35.0% | |
| ! | GTTTTCCATACACACTAACA+AGG | + | chr3_2:37515274-37515293 | None:intergenic | 35.0% |
| CAAGACCCTAGATAATGATA+TGG | - | chr3_2:37515490-37515509 | Msa0404800:intron | 35.0% | |
| ACTGCCCATATCATTATCTA+GGG | + | chr3_2:37515498-37515517 | None:intergenic | 35.0% | |
| TCTTGCTGAGCTAAGTTTAT+TGG | - | chr3_2:37515821-37515840 | Msa0404800:CDS | 35.0% | |
| ! | TGCTTGCTAGATTCATTGTT+TGG | - | chr3_2:37515895-37515914 | Msa0404800:CDS | 35.0% |
| TATGATCAAATACTTGCCCA+GGG | + | chr3_2:37515933-37515952 | None:intergenic | 35.0% | |
| ATATGATCAAATACTTGCCC+AGG | + | chr3_2:37515934-37515953 | None:intergenic | 35.0% | |
| !! | GTATAAACCAGTTGAGTTGA+AGG | - | chr3_2:37516081-37516100 | Msa0404800:intron | 35.0% |
| TGATCTGTATATGTCAAGAC+GGG | - | chr3_2:37516123-37516142 | Msa0404800:CDS | 35.0% | |
| AACAGATCACTTGGTAAATG+AGG | + | chr3_2:37516298-37516317 | None:intergenic | 35.0% | |
| !!! | CATGTGATTTTGGGTTTCGT+TGG | + | chr3_2:37514478-37514497 | None:intergenic | 40.0% |
| CATGAATAAACGTGTCGTGT+TGG | - | chr3_2:37514494-37514513 | Msa0404800:intron | 40.0% | |
| !! | CTGGAGCATCAAAGTTTTCA+TGG | + | chr3_2:37514599-37514618 | None:intergenic | 40.0% |
| TAACTATCTTCGATCCATGG+AGG | - | chr3_2:37514635-37514654 | Msa0404800:CDS | 40.0% | |
| GATCCATGGAGGTAATCTTA+TGG | - | chr3_2:37514646-37514665 | Msa0404800:CDS | 40.0% | |
| GACAAAGAGAAGACCAATGA+AGG | - | chr3_2:37514752-37514771 | Msa0404800:intron | 40.0% | |
| GAAGCTTGACCCTATTGATA+GGG | + | chr3_2:37514926-37514945 | None:intergenic | 40.0% | |
| TGAAGCTTGACCCTATTGAT+AGG | + | chr3_2:37514927-37514946 | None:intergenic | 40.0% | |
| TAGGGTCAAGCTTCAATTGT+TGG | - | chr3_2:37514932-37514951 | Msa0404800:CDS | 40.0% | |
| AGGGTCAAGCTTCAATTGTT+GGG | - | chr3_2:37514933-37514952 | Msa0404800:CDS | 40.0% | |
| ATAATTCTTCGACATGGGGT+GGG | + | chr3_2:37515099-37515118 | None:intergenic | 40.0% | |
| GTTTGGGTGCCTTAATAGTT+TGG | - | chr3_2:37515234-37515253 | Msa0404800:CDS | 40.0% | |
| AGAGAGATCAACCCCTAAAA+AGG | - | chr3_2:37515302-37515321 | Msa0404800:intron | 40.0% | |
| GACTGCCCATATCATTATCT+AGG | + | chr3_2:37515499-37515518 | None:intergenic | 40.0% | |
| TGTAGTTTCTGTGATACAGG+AGG | - | chr3_2:37515631-37515650 | Msa0404800:CDS | 40.0% | |
| !! | GACATTTCGAAAGCGTTGTT+AGG | - | chr3_2:37515720-37515739 | Msa0404800:intron | 40.0% |
| TGTGAGATTCTTGCCTTCTT+TGG | - | chr3_2:37515854-37515873 | Msa0404800:CDS | 40.0% | |
| ! | ATACCCAGAGTATTCTTGCA+GGG | + | chr3_2:37516065-37516084 | None:intergenic | 40.0% |
| ! | TATACCCAGAGTATTCTTGC+AGG | + | chr3_2:37516066-37516085 | None:intergenic | 40.0% |
| TGTATATGTCAAGACGGGAA+GGG | - | chr3_2:37516128-37516147 | Msa0404800:CDS | 40.0% | |
| ! | AAGGGTCATTTGAAGCTACT+CGG | - | chr3_2:37516146-37516165 | Msa0404800:CDS | 40.0% |
| GGAGAAATACAAGCAGTACA+AGG | - | chr3_2:37516168-37516187 | Msa0404800:CDS | 40.0% | |
| AGATCACTTGGTAAATGAGG+AGG | + | chr3_2:37516295-37516314 | None:intergenic | 40.0% | |
| !!! | CATGTGATTTTGGGTTTCGT+TGG | + | chr3_2:37514478-37514497 | None:intergenic | 40.0% |
| CATGAATAAACGTGTCGTGT+TGG | - | chr3_2:37514494-37514513 | Msa0404800:intron | 40.0% | |
| !! | CTGGAGCATCAAAGTTTTCA+TGG | + | chr3_2:37514599-37514618 | None:intergenic | 40.0% |
| TAACTATCTTCGATCCATGG+AGG | - | chr3_2:37514635-37514654 | Msa0404800:CDS | 40.0% | |
| GATCCATGGAGGTAATCTTA+TGG | - | chr3_2:37514646-37514665 | Msa0404800:CDS | 40.0% | |
| GACAAAGAGAAGACCAATGA+AGG | - | chr3_2:37514752-37514771 | Msa0404800:intron | 40.0% | |
| GAAGCTTGACCCTATTGATA+GGG | + | chr3_2:37514926-37514945 | None:intergenic | 40.0% | |
| TGAAGCTTGACCCTATTGAT+AGG | + | chr3_2:37514927-37514946 | None:intergenic | 40.0% | |
| TAGGGTCAAGCTTCAATTGT+TGG | - | chr3_2:37514932-37514951 | Msa0404800:CDS | 40.0% | |
| AGGGTCAAGCTTCAATTGTT+GGG | - | chr3_2:37514933-37514952 | Msa0404800:CDS | 40.0% | |
| ATAATTCTTCGACATGGGGT+GGG | + | chr3_2:37515099-37515118 | None:intergenic | 40.0% | |
| GTTTGGGTGCCTTAATAGTT+TGG | - | chr3_2:37515234-37515253 | Msa0404800:CDS | 40.0% | |
| AGAGAGATCAACCCCTAAAA+AGG | - | chr3_2:37515302-37515321 | Msa0404800:intron | 40.0% | |
| GACTGCCCATATCATTATCT+AGG | + | chr3_2:37515499-37515518 | None:intergenic | 40.0% | |
| TGTAGTTTCTGTGATACAGG+AGG | - | chr3_2:37515631-37515650 | Msa0404800:CDS | 40.0% | |
| !! | GACATTTCGAAAGCGTTGTT+AGG | - | chr3_2:37515720-37515739 | Msa0404800:intron | 40.0% |
| TGTGAGATTCTTGCCTTCTT+TGG | - | chr3_2:37515854-37515873 | Msa0404800:CDS | 40.0% | |
| ! | ATACCCAGAGTATTCTTGCA+GGG | + | chr3_2:37516065-37516084 | None:intergenic | 40.0% |
| ! | TATACCCAGAGTATTCTTGC+AGG | + | chr3_2:37516066-37516085 | None:intergenic | 40.0% |
| TGTATATGTCAAGACGGGAA+GGG | - | chr3_2:37516128-37516147 | Msa0404800:CDS | 40.0% | |
| ! | AAGGGTCATTTGAAGCTACT+CGG | - | chr3_2:37516146-37516165 | Msa0404800:CDS | 40.0% |
| GGAGAAATACAAGCAGTACA+AGG | - | chr3_2:37516168-37516187 | Msa0404800:CDS | 40.0% | |
| AGATCACTTGGTAAATGAGG+AGG | + | chr3_2:37516295-37516314 | None:intergenic | 40.0% | |
| GACCCATAAGATTACCTCCA+TGG | + | chr3_2:37514652-37514671 | None:intergenic | 45.0% | |
| GGCTTACGATGCAATGTACA+TGG | + | chr3_2:37514967-37514986 | None:intergenic | 45.0% | |
| CATAATTCTTCGACATGGGG+TGG | + | chr3_2:37515100-37515119 | None:intergenic | 45.0% | |
| TTGGTCTCAGTAGTTGCGTT+TGG | - | chr3_2:37515345-37515364 | Msa0404800:intron | 45.0% | |
| TGGTCTCAGTAGTTGCGTTT+GGG | - | chr3_2:37515346-37515365 | Msa0404800:intron | 45.0% | |
| GAGATTCTTGCCTTCTTTGG+TGG | - | chr3_2:37515857-37515876 | Msa0404800:CDS | 45.0% | |
| TTTGGCCCAAAACTTATCCC+TGG | - | chr3_2:37515913-37515932 | Msa0404800:CDS | 45.0% | |
| TTGGCCCAAAACTTATCCCT+GGG | - | chr3_2:37515914-37515933 | Msa0404800:CDS | 45.0% | |
| ! | CTTGCCCAGGGATAAGTTTT+GGG | + | chr3_2:37515921-37515940 | None:intergenic | 45.0% |
| ! | ACTTGCCCAGGGATAAGTTT+TGG | + | chr3_2:37515922-37515941 | None:intergenic | 45.0% |
| ACGCATTCCTTCAACTCAAC+TGG | + | chr3_2:37516091-37516110 | None:intergenic | 45.0% | |
| CTGTATATGTCAAGACGGGA+AGG | - | chr3_2:37516127-37516146 | Msa0404800:CDS | 45.0% | |
| ! | AGGGTCATTTGAAGCTACTC+GGG | - | chr3_2:37516147-37516166 | Msa0404800:CDS | 45.0% |
| TTGGTAAATGAGGAGGCGAA+GGG | + | chr3_2:37516288-37516307 | None:intergenic | 45.0% | |
| GACCCATAAGATTACCTCCA+TGG | + | chr3_2:37514652-37514671 | None:intergenic | 45.0% | |
| GGCTTACGATGCAATGTACA+TGG | + | chr3_2:37514967-37514986 | None:intergenic | 45.0% | |
| CATAATTCTTCGACATGGGG+TGG | + | chr3_2:37515100-37515119 | None:intergenic | 45.0% | |
| TTGGTCTCAGTAGTTGCGTT+TGG | - | chr3_2:37515345-37515364 | Msa0404800:intron | 45.0% | |
| TGGTCTCAGTAGTTGCGTTT+GGG | - | chr3_2:37515346-37515365 | Msa0404800:intron | 45.0% | |
| GAGATTCTTGCCTTCTTTGG+TGG | - | chr3_2:37515857-37515876 | Msa0404800:CDS | 45.0% | |
| TTTGGCCCAAAACTTATCCC+TGG | - | chr3_2:37515913-37515932 | Msa0404800:CDS | 45.0% | |
| TTGGCCCAAAACTTATCCCT+GGG | - | chr3_2:37515914-37515933 | Msa0404800:CDS | 45.0% | |
| ! | CTTGCCCAGGGATAAGTTTT+GGG | + | chr3_2:37515921-37515940 | None:intergenic | 45.0% |
| ! | ACTTGCCCAGGGATAAGTTT+TGG | + | chr3_2:37515922-37515941 | None:intergenic | 45.0% |
| ACGCATTCCTTCAACTCAAC+TGG | + | chr3_2:37516091-37516110 | None:intergenic | 45.0% | |
| CTGTATATGTCAAGACGGGA+AGG | - | chr3_2:37516127-37516146 | Msa0404800:CDS | 45.0% | |
| ! | AGGGTCATTTGAAGCTACTC+GGG | - | chr3_2:37516147-37516166 | Msa0404800:CDS | 45.0% |
| TTGGTAAATGAGGAGGCGAA+GGG | + | chr3_2:37516288-37516307 | None:intergenic | 45.0% | |
| TTGAGACTCGCTCTGCAAAG+AGG | - | chr3_2:37514448-37514467 | Msa0404800:CDS | 50.0% | |
| GGTGCCTTAATAGTTTGGGC+AGG | - | chr3_2:37515239-37515258 | Msa0404800:CDS | 50.0% | |
| GGTCTCAGTAGTTGCGTTTG+GGG | - | chr3_2:37515347-37515366 | Msa0404800:intron | 50.0% | |
| TCAGCCCTGCAAGAATACTC+TGG | - | chr3_2:37516058-37516077 | Msa0404800:intron | 50.0% | |
| CAGCCCTGCAAGAATACTCT+GGG | - | chr3_2:37516059-37516078 | Msa0404800:intron | 50.0% | |
| CTTGGTAAATGAGGAGGCGA+AGG | + | chr3_2:37516289-37516308 | None:intergenic | 50.0% | |
| TTGAGACTCGCTCTGCAAAG+AGG | - | chr3_2:37514448-37514467 | Msa0404800:CDS | 50.0% | |
| GGTGCCTTAATAGTTTGGGC+AGG | - | chr3_2:37515239-37515258 | Msa0404800:CDS | 50.0% | |
| GGTCTCAGTAGTTGCGTTTG+GGG | - | chr3_2:37515347-37515366 | Msa0404800:intron | 50.0% | |
| TCAGCCCTGCAAGAATACTC+TGG | - | chr3_2:37516058-37516077 | Msa0404800:intron | 50.0% | |
| CAGCCCTGCAAGAATACTCT+GGG | - | chr3_2:37516059-37516078 | Msa0404800:intron | 50.0% | |
| CTTGGTAAATGAGGAGGCGA+AGG | + | chr3_2:37516289-37516308 | None:intergenic | 50.0% | |
| ATCGACGCAGCCACCAAAGA+AGG | + | chr3_2:37515870-37515889 | None:intergenic | 55.0% | |
| GTAAATGAGGAGGCGAAGGG+AGG | + | chr3_2:37516285-37516304 | None:intergenic | 55.0% | |
| ATCGACGCAGCCACCAAAGA+AGG | + | chr3_2:37515870-37515889 | None:intergenic | 55.0% | |
| GTAAATGAGGAGGCGAAGGG+AGG | + | chr3_2:37516285-37516304 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 37514444 | 37516321 | 37514444 | ID=Msa0404800;Name=Msa0404800 |
| chr3_2 | mRNA | 37514444 | 37516321 | 37514444 | ID=Msa0404800-mRNA-1;Parent=Msa0404800;Name=Msa0404800-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|7|0|311 |
| chr3_2 | exon | 37516109 | 37516321 | 37516109 | ID=Msa0404800-mRNA-1:exon:7525;Parent=Msa0404800-mRNA-1 |
| chr3_2 | exon | 37515786 | 37516018 | 37515786 | ID=Msa0404800-mRNA-1:exon:7524;Parent=Msa0404800-mRNA-1 |
| chr3_2 | exon | 37515612 | 37515687 | 37515612 | ID=Msa0404800-mRNA-1:exon:7523;Parent=Msa0404800-mRNA-1 |
| chr3_2 | exon | 37515206 | 37515301 | 37515206 | ID=Msa0404800-mRNA-1:exon:7522;Parent=Msa0404800-mRNA-1 |
| chr3_2 | exon | 37514854 | 37514979 | 37514854 | ID=Msa0404800-mRNA-1:exon:7521;Parent=Msa0404800-mRNA-1 |
| chr3_2 | exon | 37514576 | 37514710 | 37514576 | ID=Msa0404800-mRNA-1:exon:7520;Parent=Msa0404800-mRNA-1 |
| chr3_2 | exon | 37514444 | 37514500 | 37514444 | ID=Msa0404800-mRNA-1:exon:7519;Parent=Msa0404800-mRNA-1 |
| chr3_2 | CDS | 37516109 | 37516321 | 37516109 | ID=Msa0404800-mRNA-1:cds;Parent=Msa0404800-mRNA-1 |
| chr3_2 | CDS | 37515786 | 37516018 | 37515786 | ID=Msa0404800-mRNA-1:cds;Parent=Msa0404800-mRNA-1 |
| chr3_2 | CDS | 37515612 | 37515687 | 37515612 | ID=Msa0404800-mRNA-1:cds;Parent=Msa0404800-mRNA-1 |
| chr3_2 | CDS | 37515206 | 37515301 | 37515206 | ID=Msa0404800-mRNA-1:cds;Parent=Msa0404800-mRNA-1 |
| chr3_2 | CDS | 37514854 | 37514979 | 37514854 | ID=Msa0404800-mRNA-1:cds;Parent=Msa0404800-mRNA-1 |
| chr3_2 | CDS | 37514576 | 37514710 | 37514576 | ID=Msa0404800-mRNA-1:cds;Parent=Msa0404800-mRNA-1 |
| chr3_2 | CDS | 37514444 | 37514500 | 37514444 | ID=Msa0404800-mRNA-1:cds;Parent=Msa0404800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
