Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382430 | XP_003603302.1 | 95.776 | 805 | 31 | 1 | 1 | 805 | 1 | 802 | 0.0 | 1540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382430 | sp|Q8GUP3|PDS5C_ARATH | 39.490 | 785 | 321 | 25 | 1 | 678 | 1 | 738 | 3.50e-135 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382430 | G7J9V3 | 95.776 | 805 | 31 | 1 | 1 | 805 | 1 | 802 | 0.0 | 1540 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0070700 | Msa0382430 | 0.802100 | 6.584651e-49 | -8.615850e-47 |
| Msa0221470 | Msa0382430 | 0.821745 | 3.428539e-53 | -8.615850e-47 |
| Msa0221500 | Msa0382430 | 0.809741 | 1.628488e-50 | -8.615850e-47 |
| Msa0382430 | Msa0432090 | 0.970268 | 2.328008e-131 | -8.615850e-47 |
| Msa0382430 | Msa0520950 | 0.975020 | 3.416104e-139 | -8.615850e-47 |
| Msa0382430 | Msa1263750 | 0.830103 | 3.546499e-55 | -8.615850e-47 |
| Msa0382430 | Msa1263790 | 0.806722 | 7.166513e-50 | -8.615850e-47 |
| Msa0382430 | Msa1297230 | 0.800954 | 1.131087e-48 | -8.615850e-47 |
| Msa0382430 | Msa1390440 | 0.804235 | 2.381027e-49 | -8.615850e-47 |
| Msa0382430 | Msa1405030 | 0.805157 | 1.528663e-49 | -8.615850e-47 |
| Msa0263060 | Msa0382430 | 0.802472 | 5.520807e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382430 | MtrunA17_Chr3g0137011 | 95.776 | 805 | 31 | 1 | 1 | 805 | 1 | 802 | 0.0 | 1540 |
| Msa0382430 | MtrunA17_Chr1g0149971 | 62.500 | 328 | 92 | 1 | 1 | 297 | 1 | 328 | 5.05e-136 | 426 |
| Msa0382430 | MtrunA17_Chr1g0149971 | 38.529 | 571 | 265 | 15 | 293 | 805 | 396 | 938 | 8.85e-63 | 228 |
| Msa0382430 | MtrunA17_Chr4g0001301 | 46.457 | 254 | 135 | 1 | 4 | 256 | 6 | 259 | 8.05e-66 | 235 |
| Msa0382430 | MtrunA17_Chr4g0001301 | 31.915 | 141 | 71 | 3 | 455 | 593 | 704 | 821 | 2.60e-14 | 77.0 |
| Msa0382430 | MtrunA17_Chr4g0076411 | 46.977 | 215 | 114 | 0 | 23 | 237 | 29 | 243 | 4.33e-54 | 203 |
| Msa0382430 | MtrunA17_Chr4g0076411 | 33.945 | 109 | 51 | 3 | 496 | 587 | 1324 | 1428 | 6.43e-15 | 79.7 |
| Msa0382430 | MtrunA17_Chr2g0290621 | 44.053 | 227 | 127 | 0 | 11 | 237 | 8 | 234 | 2.31e-52 | 198 |
| Msa0382430 | MtrunA17_Chr2g0290621 | 41.053 | 95 | 46 | 2 | 500 | 588 | 1331 | 1421 | 3.89e-16 | 83.6 |
| Msa0382430 | MtrunA17_Chr1g0164141 | 36.471 | 170 | 108 | 0 | 54 | 223 | 62 | 231 | 8.51e-32 | 134 |
| Msa0382430 | MtrunA17_Chr4g0013631 | 43.103 | 116 | 65 | 1 | 10 | 124 | 18 | 133 | 2.33e-23 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382430 | AT4G31880.1 | 39.490 | 785 | 321 | 25 | 1 | 678 | 1 | 738 | 3.56e-136 | 426 |
| Msa0382430 | AT4G31880.2 | 39.668 | 784 | 320 | 25 | 1 | 678 | 1 | 737 | 3.90e-136 | 425 |
| Msa0382430 | AT1G80810.5 | 52.174 | 253 | 119 | 1 | 1 | 253 | 5 | 255 | 2.31e-81 | 275 |
| Msa0382430 | AT1G15940.1 | 51.894 | 264 | 125 | 1 | 9 | 272 | 13 | 274 | 6.31e-81 | 280 |
| Msa0382430 | AT1G80810.3 | 52.174 | 253 | 119 | 1 | 1 | 253 | 5 | 255 | 1.16e-80 | 276 |
| Msa0382430 | AT1G80810.1 | 52.709 | 203 | 96 | 0 | 51 | 253 | 1 | 203 | 3.70e-67 | 238 |
| Msa0382430 | AT1G80810.4 | 52.709 | 203 | 96 | 0 | 51 | 253 | 1 | 203 | 3.72e-67 | 238 |
| Msa0382430 | AT1G80810.2 | 52.709 | 203 | 96 | 0 | 51 | 253 | 1 | 203 | 3.72e-67 | 238 |
| Msa0382430 | AT5G47690.1 | 48.165 | 218 | 113 | 0 | 9 | 226 | 6 | 223 | 2.69e-50 | 192 |
| Msa0382430 | AT5G47690.1 | 42.697 | 89 | 47 | 2 | 502 | 587 | 1333 | 1420 | 7.03e-17 | 86.3 |
| Msa0382430 | AT5G47690.2 | 48.165 | 218 | 113 | 0 | 9 | 226 | 6 | 223 | 2.69e-50 | 192 |
| Msa0382430 | AT5G47690.2 | 42.697 | 89 | 47 | 2 | 502 | 587 | 1334 | 1421 | 7.15e-17 | 86.3 |
| Msa0382430 | AT5G47690.3 | 48.165 | 218 | 113 | 0 | 9 | 226 | 6 | 223 | 2.81e-50 | 192 |
| Msa0382430 | AT5G47690.3 | 42.697 | 89 | 47 | 2 | 502 | 587 | 1334 | 1421 | 6.97e-17 | 86.3 |
| Msa0382430 | AT5G47690.4 | 53.175 | 126 | 59 | 0 | 101 | 226 | 1 | 126 | 5.00e-28 | 122 |
| Msa0382430 | AT5G47690.4 | 42.697 | 89 | 47 | 2 | 502 | 587 | 1237 | 1324 | 8.26e-17 | 86.3 |
| Msa0382430 | AT1G77600.1 | 30.736 | 231 | 129 | 3 | 27 | 228 | 25 | 253 | 4.07e-27 | 119 |
| Msa0382430 | AT1G77600.2 | 30.736 | 231 | 129 | 3 | 27 | 228 | 25 | 253 | 5.02e-27 | 119 |
| Msa0382430 | AT1G77600.3 | 30.736 | 231 | 129 | 3 | 27 | 228 | 25 | 253 | 7.50e-27 | 118 |
| Msa0382430 | AT5G10950.1 | 40.426 | 141 | 77 | 3 | 517 | 651 | 20 | 159 | 8.56e-20 | 93.2 |
Find 222 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACGCTTCTTTCCCTTCA+TGG | 0.130811 | 3_1:-84954802 | None:intergenic |
| TGTTTGGATATTCCACTCTT+TGG | 0.166899 | 3_1:-84954591 | None:intergenic |
| CCCTCAGAAGCAGCAGTCTT+TGG | 0.171948 | 3_1:-84954621 | None:intergenic |
| CTCTTCTTGGTGGCTTCTTC+TGG | 0.173818 | 3_1:-84951040 | None:intergenic |
| TGAAGTTAGCAGAAAGTTTA+AGG | 0.179426 | 3_1:+84954422 | Msa0382430:CDS |
| AGCCGATTTATGAAAGAATT+AGG | 0.183426 | 3_1:-84948811 | None:intergenic |
| GTTTGGATATTCCACTCTTT+GGG | 0.201717 | 3_1:-84954590 | None:intergenic |
| GACTAGTTTAGTGGTATTTC+GGG | 0.203898 | 3_1:+84955025 | Msa0382430:three_prime_UTR |
| CGATTGTGCAGCCTCTTTAA+TGG | 0.217465 | 3_1:-84950900 | None:intergenic |
| TGAATGTGATGCGCTGATTT+TGG | 0.218531 | 3_1:+84950036 | Msa0382430:CDS |
| GGACCCTCTCTCCCAATTTC+CGG | 0.226072 | 3_1:-84950751 | None:intergenic |
| CCTCAGAAGCAGCAGTCTTT+GGG | 0.234718 | 3_1:-84954620 | None:intergenic |
| CAAATGAAGATACAATTAAT+TGG | 0.235034 | 3_1:-84949916 | None:intergenic |
| CTTGGAACCACCAATGTTCT+TGG | 0.235408 | 3_1:-84954502 | None:intergenic |
| TTTCCCGATTGCCCGGAAAT+TGG | 0.235820 | 3_1:+84950739 | Msa0382430:CDS |
| GATTTACTGCTACCACTTAT+AGG | 0.247954 | 3_1:-84954453 | None:intergenic |
| TTCCCATTTCGATTATCTTT+TGG | 0.253044 | 3_1:-84950923 | None:intergenic |
| GTGGTGGTGGATCCTCTTCC+AGG | 0.256318 | 3_1:+84951524 | Msa0382430:CDS |
| GGACTAGTTTAGTGGTATTT+CGG | 0.257064 | 3_1:+84955024 | Msa0382430:three_prime_UTR |
| CACTGGCTGCTTGACAGGTT+TGG | 0.265314 | 3_1:-84951371 | None:intergenic |
| ACCCTAATTCTTTCATAAAT+CGG | 0.290581 | 3_1:+84948809 | Msa0382430:five_prime_UTR |
| CGATATAAATGAAAATGAAT+TGG | 0.293104 | 3_1:-84955200 | None:intergenic |
| AAAGCACTCAGCCAGGAAAT+TGG | 0.293936 | 3_1:+84951489 | Msa0382430:CDS |
| GAATGCCAGGTCTTTCTTCC+AGG | 0.300277 | 3_1:+84953751 | Msa0382430:CDS |
| TGAATCTAGAGCTGTTTATT+AGG | 0.302287 | 3_1:+84954942 | Msa0382430:three_prime_UTR |
| AAAACTGCTGGTACAGATTC+AGG | 0.303408 | 3_1:+84951427 | Msa0382430:CDS |
| AGATGAGGAGTTCAATGATT+TGG | 0.311693 | 3_1:+84950994 | Msa0382430:CDS |
| GCCGATTTATGAAAGAATTA+GGG | 0.320707 | 3_1:-84948810 | None:intergenic |
| CACCAAGCAGGGCTTTAGTT+TGG | 0.323387 | 3_1:-84950789 | None:intergenic |
| CCAACCAATTCTTTCATAGA+TGG | 0.327431 | 3_1:-84949658 | None:intergenic |
| TTTCTCACTGGCTGCTTGAC+AGG | 0.329822 | 3_1:-84951376 | None:intergenic |
| ATCTTCAGATGATTTGATAT+CGG | 0.332179 | 3_1:-84951732 | None:intergenic |
| CTCAAGAACAAGTGTCATAA+TGG | 0.335249 | 3_1:-84950526 | None:intergenic |
| GTGCACTTTCTTACAACATT+TGG | 0.337599 | 3_1:+84954890 | Msa0382430:three_prime_UTR |
| CAATACTGGCAGATGTTTAC+CGG | 0.340074 | 3_1:+84955173 | Msa0382430:three_prime_UTR |
| TAGTGGTATTTCGGGTTAGT+AGG | 0.343103 | 3_1:+84955033 | Msa0382430:three_prime_UTR |
| CTCGTTATCATCCAATTTCC+TGG | 0.347155 | 3_1:-84951500 | None:intergenic |
| CCTGGCATTCCTTGCTTAGT+TGG | 0.353048 | 3_1:-84953738 | None:intergenic |
| TGAAAACAGCTAAAATCATT+TGG | 0.358637 | 3_1:+84955110 | Msa0382430:three_prime_UTR |
| GAAAATTTAGTTTCAGAGAT+AGG | 0.360520 | 3_1:+84948592 | None:intergenic |
| TGATTTGCTTTCTCCACTCC+TGG | 0.366420 | 3_1:+84950569 | Msa0382430:CDS |
| TCGCCAAAAGATAATCGAAA+TGG | 0.369344 | 3_1:+84950920 | Msa0382430:CDS |
| CCTTCATTGAATGAATGCTT+TGG | 0.373103 | 3_1:+84955140 | Msa0382430:three_prime_UTR |
| GCAATTCGCATAGACGTTCT+AGG | 0.374167 | 3_1:-84949628 | None:intergenic |
| TTCCCGATTGCCCGGAAATT+GGG | 0.382628 | 3_1:+84950740 | Msa0382430:CDS |
| CTATCCTTGGACTAGTTTAG+TGG | 0.385542 | 3_1:+84955016 | Msa0382430:three_prime_UTR |
| TTAGACTTGACTGAAGGTTT+TGG | 0.386181 | 3_1:-84954558 | None:intergenic |
| TGCTCCATCTATGAAAGAAT+TGG | 0.389043 | 3_1:+84949654 | Msa0382430:CDS |
| TGATTGTGAAGGAAAATAAC+AGG | 0.390612 | 3_1:-84948742 | None:intergenic |
| GACCCTCTCTCCCAATTTCC+GGG | 0.390697 | 3_1:-84950750 | None:intergenic |
| ATTTGTAGTGGTGGAGCATC+AGG | 0.391514 | 3_1:+84954306 | Msa0382430:intron |
| TCTCCCAATTTCCGGGCAAT+CGG | 0.396259 | 3_1:-84950743 | None:intergenic |
| CATCTATGAAAGAATTGGTT+GGG | 0.401175 | 3_1:+84949659 | Msa0382430:CDS |
| TCAAAGGGTGTACTGAAGTT+TGG | 0.402194 | 3_1:+84954339 | Msa0382430:CDS |
| ATCAATGGCGTTTGATCAAA+AGG | 0.402831 | 3_1:+84948928 | Msa0382430:exon |
| TCCGTTGTTTCTAGACTAGA+TGG | 0.407139 | 3_1:+84955078 | Msa0382430:three_prime_UTR |
| CAATGTTGAATCTCAAGTTA+TGG | 0.415971 | 3_1:+84951204 | Msa0382430:CDS |
| TATGATAGCATTGCTATCCT+TGG | 0.418722 | 3_1:+84955003 | Msa0382430:three_prime_UTR |
| ATCTGAAGATGAAAAGTTAG+AGG | 0.418816 | 3_1:+84951745 | Msa0382430:CDS |
| TTCATTTGATCATCATCATA+AGG | 0.422883 | 3_1:-84949772 | None:intergenic |
| TTTCCCTGGCCCGTGTCCTC+TGG | 0.427090 | 3_1:+84954919 | Msa0382430:three_prime_UTR |
| ATTCTTTCATAAATCGGCTT+CGG | 0.428490 | 3_1:+84948815 | Msa0382430:five_prime_UTR |
| GGCGTTTGATCAAAAGGAAC+TGG | 0.431509 | 3_1:+84948934 | Msa0382430:CDS |
| TTGAAGTATTAAATCTTGCC+AGG | 0.435890 | 3_1:+84953246 | Msa0382430:CDS |
| TTACTTAGCAAAGGTGGAAC+AGG | 0.436311 | 3_1:+84949603 | Msa0382430:CDS |
| TAAGCCGATCGTACGAGAAT+AGG | 0.436698 | 3_1:+84949957 | Msa0382430:CDS |
| GAGAACATTGGGTATATCTC+TGG | 0.436803 | 3_1:+84950820 | Msa0382430:CDS |
| TAGCTTCCTTAGCTTCCTCT+TGG | 0.437976 | 3_1:-84950874 | None:intergenic |
| GAGGAGACTACCACGACAAA+TGG | 0.438286 | 3_1:+84951764 | Msa0382430:CDS |
| ATTCAGTGCAAGATCTGAAA+AGG | 0.444766 | 3_1:+84948887 | Msa0382430:five_prime_UTR |
| TAACTGCATAAGCAACTTCC+TGG | 0.448796 | 3_1:-84951165 | None:intergenic |
| GAAGCGTCAGAGAAGCTAGA+AGG | 0.453355 | 3_1:+84954815 | Msa0382430:exon |
| CTCTGCAACCTCGACATTTG+AGG | 0.454625 | 3_1:-84951305 | None:intergenic |
| GATATAAATGAAAATGAATT+GGG | 0.455777 | 3_1:-84955199 | None:intergenic |
| CCCAAAGACTGCTGCTTCTG+AGG | 0.456966 | 3_1:+84954620 | Msa0382430:CDS |
| CTCCCAATTTCCGGGCAATC+GGG | 0.457215 | 3_1:-84950742 | None:intergenic |
| TCTGCAACCTCGACATTTGA+GGG | 0.459300 | 3_1:-84951304 | None:intergenic |
| AAATCAGCGCATCACATTCA+AGG | 0.460455 | 3_1:-84950033 | None:intergenic |
| TGGATCCTCTTCCAGGCAGC+TGG | 0.464531 | 3_1:+84951531 | Msa0382430:CDS |
| CTCACTGCTTGCACCAAGCA+GGG | 0.464741 | 3_1:-84950800 | None:intergenic |
| CGCCAAAAGATAATCGAAAT+GGG | 0.466756 | 3_1:+84950921 | Msa0382430:CDS |
| CTCAGAATCACTAACAGTCT+TGG | 0.467604 | 3_1:-84954397 | None:intergenic |
| GTGCAAGCAGTGAGAACATT+GGG | 0.468297 | 3_1:+84950809 | Msa0382430:CDS |
| CTATCAGGAGTCTGATATCA+TGG | 0.468949 | 3_1:+84952009 | Msa0382430:intron |
| TTTCTTATCTACCAGCTGCC+TGG | 0.470755 | 3_1:-84951542 | None:intergenic |
| TGACCTTTGCAACAGTTTCG+AGG | 0.471117 | 3_1:-84949988 | None:intergenic |
| AAGAAGCCACCAAGAAGAGC+AGG | 0.472325 | 3_1:+84951044 | Msa0382430:CDS |
| TTTCAATTGAACACTATCAA+TGG | 0.474728 | 3_1:+84948913 | Msa0382430:exon |
| TCTCACTGCTTGCACCAAGC+AGG | 0.474746 | 3_1:-84950801 | None:intergenic |
| CACTGTCGACAGTGGTGGCA+AGG | 0.476270 | 3_1:+84954671 | Msa0382430:CDS |
| GTTTGGATCCGCAGCTTTCG+AGG | 0.478725 | 3_1:-84950772 | None:intergenic |
| AGTACTTACTGACGATCCTT+CGG | 0.483797 | 3_1:-84952076 | None:intergenic |
| ATCATCATCATAAGGAGTAT+CGG | 0.486302 | 3_1:-84949764 | None:intergenic |
| TCCTTGCTTAGTTGGTTCAT+CGG | 0.486584 | 3_1:-84953730 | None:intergenic |
| TTCACCAGAGGACACGGGCC+AGG | 0.486984 | 3_1:-84954923 | None:intergenic |
| GATACAAAAGTCAAGACATC+AGG | 0.488137 | 3_1:+84954774 | Msa0382430:CDS |
| TAAATCTTGCCAGGGAAAAG+TGG | 0.488497 | 3_1:+84953255 | Msa0382430:CDS |
| GCAAGTGCAGCTTTCACATC+CGG | 0.489095 | 3_1:-84949706 | None:intergenic |
| ACATTTGGACATTCTTTCCC+TGG | 0.489687 | 3_1:+84954905 | Msa0382430:three_prime_UTR |
| CCAAAGCATTCATTCAATGA+AGG | 0.489899 | 3_1:-84955140 | None:intergenic |
| ATGAAAATGAATTGGGTGGC+CGG | 0.490428 | 3_1:-84955192 | None:intergenic |
| AGTGGTATTTCGGGTTAGTA+GGG | 0.491321 | 3_1:+84955034 | Msa0382430:three_prime_UTR |
| ATCTACCAGCTGCCTGGAAG+AGG | 0.493633 | 3_1:-84951536 | None:intergenic |
| TTCTCCTATTCTCGTACGAT+CGG | 0.494206 | 3_1:-84949961 | None:intergenic |
| GATGATAACGAGGGTGGTGG+TGG | 0.497097 | 3_1:+84951511 | Msa0382430:CDS |
| CATTATGACACTTGTTCTTG+AGG | 0.498006 | 3_1:+84950527 | Msa0382430:CDS |
| CCCATCGTTTGTGACTGACT+TGG | 0.499177 | 3_1:-84950954 | None:intergenic |
| CTCAGAAGCAGCAGTCTTTG+GGG | 0.500613 | 3_1:-84954619 | None:intergenic |
| ATCAGGATCAAGTAAATCAA+AGG | 0.501024 | 3_1:+84954323 | Msa0382430:CDS |
| TTAGTTGGTTCATCGGAACT+TGG | 0.501735 | 3_1:-84953723 | None:intergenic |
| GCAGCTTTCACATCCGGATC+CGG | 0.502993 | 3_1:-84949700 | None:intergenic |
| GACATCAGGTGATGCCATGA+AGG | 0.505863 | 3_1:+84954788 | Msa0382430:CDS |
| CCAACTAAGCAAGGAATGCC+AGG | 0.506972 | 3_1:+84953738 | Msa0382430:CDS |
| GAAGAGCAGCTTATTCAAGC+TGG | 0.507054 | 3_1:+84948956 | Msa0382430:CDS |
| AACGATGGGGTTGCACGCGT+TGG | 0.509353 | 3_1:+84950968 | Msa0382430:CDS |
| AAGTGTCATAATGGTTTCCA+TGG | 0.511959 | 3_1:-84950517 | None:intergenic |
| TGTCAAGCAGCCAGTGAGAA+AGG | 0.513418 | 3_1:+84951378 | Msa0382430:CDS |
| TCATCATCATAAGGAGTATC+GGG | 0.514597 | 3_1:-84949763 | None:intergenic |
| TGACCAAGCACCTTTCTCAC+TGG | 0.515686 | 3_1:-84951388 | None:intergenic |
| GAGGAGTTCAATGATTTGGA+TGG | 0.521328 | 3_1:+84950998 | Msa0382430:CDS |
| TCCTGCTTAGACTTGACTGA+AGG | 0.526416 | 3_1:-84954564 | None:intergenic |
| TTTGGATATTCCACTCTTTG+GGG | 0.526750 | 3_1:-84954589 | None:intergenic |
| GAAGTTTGGTCAGAAGTCTA+CGG | 0.527431 | 3_1:+84954353 | Msa0382430:CDS |
| AGAAGGCAAGCAACTAGATA+AGG | 0.532078 | 3_1:-84954859 | None:intergenic |
| AGAAGCTCATCCACCGATGA+AGG | 0.533354 | 3_1:-84948998 | None:intergenic |
| ACCTTCAGTCAAGTCTAAGC+AGG | 0.533676 | 3_1:+84954563 | Msa0382430:CDS |
| GGAAAGAGGAAACACGCCTC+GGG | 0.536558 | 3_1:+84951785 | Msa0382430:CDS |
| GATGATTACAGTGAAGTACT+TGG | 0.537086 | 3_1:+84950842 | Msa0382430:CDS |
| TTCTTAATGCTCTCCAGGAG+TGG | 0.538291 | 3_1:-84950582 | None:intergenic |
| TTGTTTCTAGACTAGATGGA+TGG | 0.539866 | 3_1:+84955082 | Msa0382430:three_prime_UTR |
| CCAAAGACTGCTGCTTCTGA+GGG | 0.540580 | 3_1:+84954621 | Msa0382430:CDS |
| GATGATTTGATATCGGACCT+TGG | 0.541074 | 3_1:-84951725 | None:intergenic |
| ATCCAAACTAAAGCCCTGCT+TGG | 0.543376 | 3_1:+84950787 | Msa0382430:CDS |
| AAGGTGCTTGGTCAGAACTC+AGG | 0.544043 | 3_1:+84951397 | Msa0382430:CDS |
| AGAGGAAGCTAAGGAAGCTA+AGG | 0.545314 | 3_1:+84950877 | Msa0382430:CDS |
| TGGTCCTCGTGTGAGGAACT+CGG | 0.546241 | 3_1:-84951145 | None:intergenic |
| TTGGATGATAACGAGGGTGG+TGG | 0.548250 | 3_1:+84951508 | Msa0382430:CDS |
| TCGGTGTAAGACTTGAAGTA+TGG | 0.548327 | 3_1:+84952050 | Msa0382430:CDS |
| CCATCTATGAAAGAATTGGT+TGG | 0.549801 | 3_1:+84949658 | Msa0382430:CDS |
| AAGTTTGGTCAGAAGTCTAC+GGG | 0.550142 | 3_1:+84954354 | Msa0382430:CDS |
| CCAAGTCAGTCACAAACGAT+GGG | 0.552533 | 3_1:+84950954 | Msa0382430:CDS |
| GAACATGATCAAAACCTTGT+CGG | 0.553166 | 3_1:+84952031 | Msa0382430:CDS |
| TCTGCTACACAGACAATGAC+TGG | 0.554858 | 3_1:+84954474 | Msa0382430:CDS |
| GCAGATTTCGTTGAATGACT+CGG | 0.555015 | 3_1:-84951073 | None:intergenic |
| TTCCAAGACAAGCAAAAGAA+AGG | 0.556484 | 3_1:+84954518 | Msa0382430:CDS |
| TGCCCGGAAATTGGGAGAGA+GGG | 0.556592 | 3_1:+84950748 | Msa0382430:CDS |
| TGATCCTATTCAGGCCTGCA+AGG | 0.559546 | 3_1:+84953688 | Msa0382430:intron |
| AACTTCCTGGTCCTCGTGTG+AGG | 0.560010 | 3_1:-84951152 | None:intergenic |
| GGAAGCTAAGGCCATTAAAG+AGG | 0.561082 | 3_1:+84950889 | Msa0382430:CDS |
| GAGTTCCTCACACGAGGACC+AGG | 0.561728 | 3_1:+84951147 | Msa0382430:CDS |
| AGGAAATGGTTTCTTCTCCA+AGG | 0.561969 | 3_1:+84951708 | Msa0382430:intron |
| TCAGGATCAAGTAAATCAAA+GGG | 0.562001 | 3_1:+84954324 | Msa0382430:CDS |
| ACTGTCGACAGTGGTGGCAA+GGG | 0.563929 | 3_1:+84954672 | Msa0382430:CDS |
| GCTTGCAGATCCTCCTTCAT+CGG | 0.566230 | 3_1:+84948985 | Msa0382430:CDS |
| CAGATCATGTGTGGTAATGT+TGG | 0.566430 | 3_1:+84950009 | Msa0382430:CDS |
| CTTGCCACCACTGTCGACAG+TGG | 0.567493 | 3_1:-84954670 | None:intergenic |
| TCTAGATTCACCAGAGGACA+CGG | 0.567689 | 3_1:-84954929 | None:intergenic |
| GAAAATCATTCAGAGAAACT+TGG | 0.568982 | 3_1:+84951259 | Msa0382430:CDS |
| TGCAGATCCTCCTTCATCGG+TGG | 0.570652 | 3_1:+84948988 | Msa0382430:CDS |
| AATTTGCCAAGAGGAAGCTA+AGG | 0.573068 | 3_1:+84950868 | Msa0382430:CDS |
| TGGAAAGAGGAAACACGCCT+CGG | 0.573217 | 3_1:+84951784 | Msa0382430:CDS |
| TGTGATTTCACTGATGCAAG+CGG | 0.573290 | 3_1:-84949728 | None:intergenic |
| AAGAGCAGCTTATTCAAGCT+GGG | 0.574013 | 3_1:+84948957 | Msa0382430:CDS |
| CTTCAAGTCTTACACCGACA+AGG | 0.576413 | 3_1:-84952045 | None:intergenic |
| AATCCTCGAAACTGTTGCAA+AGG | 0.577278 | 3_1:+84949985 | Msa0382430:CDS |
| CAAGACTGTTAGTGATTCTG+AGG | 0.578913 | 3_1:+84954398 | Msa0382430:CDS |
| TTCAGTGCAAGATCTGAAAA+GGG | 0.579578 | 3_1:+84948888 | Msa0382430:five_prime_UTR |
| TGAGAGTTACTTAGCAAAGG+TGG | 0.580130 | 3_1:+84949597 | Msa0382430:CDS |
| ATCTATGAAAGAATTGGTTG+GGG | 0.581374 | 3_1:+84949660 | Msa0382430:CDS |
| TCACCAGAGGACACGGGCCA+GGG | 0.581742 | 3_1:-84954922 | None:intergenic |
| CTACCACGACAAATGGAAAG+AGG | 0.582950 | 3_1:+84951771 | Msa0382430:CDS |
| TGAAGTATTAAATCTTGCCA+GGG | 0.586714 | 3_1:+84953247 | Msa0382430:CDS |
| TCCGATGAACCAACTAAGCA+AGG | 0.588293 | 3_1:+84953729 | Msa0382430:CDS |
| AAGGACAGCACTCCTATAAG+TGG | 0.588644 | 3_1:+84954441 | Msa0382430:CDS |
| GGTAAATCCAAGAACATTGG+TGG | 0.590164 | 3_1:+84954495 | Msa0382430:CDS |
| TCGTCAGGGAGGCTGTCACT+AGG | 0.590519 | 3_1:-84951238 | None:intergenic |
| CAGCCAGTGAGAAAGGTGCT+TGG | 0.593042 | 3_1:+84951385 | Msa0382430:CDS |
| ATCAGATGTTTCTGCAAGCG+AGG | 0.596014 | 3_1:+84954743 | Msa0382430:CDS |
| AAGCAGGAAACCCCAAAGAG+TGG | 0.598967 | 3_1:+84954579 | Msa0382430:CDS |
| GAGTGGAGAAAGCAAATCAA+AGG | 0.599004 | 3_1:-84950565 | None:intergenic |
| ACTGGTAAATCCAAGAACAT+TGG | 0.599698 | 3_1:+84954492 | Msa0382430:CDS |
| TCCAAGTCAGTCACAAACGA+TGG | 0.601409 | 3_1:+84950953 | Msa0382430:CDS |
| CTCAAATGTCGAGGTTGCAG+AGG | 0.601585 | 3_1:+84951306 | Msa0382430:CDS |
| ACTTGAGAGTTACTTAGCAA+AGG | 0.603086 | 3_1:+84949594 | Msa0382430:CDS |
| TTATGATGATGATCAAATGA+AGG | 0.607368 | 3_1:+84949774 | Msa0382430:CDS |
| TTGCCCGGAAATTGGGAGAG+AGG | 0.608426 | 3_1:+84950747 | Msa0382430:CDS |
| TTTCCTCTTTCCATTTGTCG+TGG | 0.609734 | 3_1:-84951774 | None:intergenic |
| CAGGAAATTGGATGATAACG+AGG | 0.611071 | 3_1:+84951501 | Msa0382430:CDS |
| TGCACGCGTTGGAGAAGATG+AGG | 0.613913 | 3_1:+84950979 | Msa0382430:CDS |
| TCCATCTAGTCTAGAAACAA+CGG | 0.615826 | 3_1:-84955079 | None:intergenic |
| GGGAGGCTGTCACTAGGTGA+AGG | 0.615922 | 3_1:-84951232 | None:intergenic |
| ATGCAACACATACATTTCAG+TGG | 0.620376 | 3_1:-84953417 | None:intergenic |
| ACATCAGGTGATGCCATGAA+GGG | 0.620593 | 3_1:+84954789 | Msa0382430:CDS |
| TAACAACAATGAGCTGATCA+CGG | 0.621097 | 3_1:-84954982 | None:intergenic |
| AGCTGATTCAGATGCAGATG+AGG | 0.623229 | 3_1:+84953289 | Msa0382430:CDS |
| CTGTCGACAGTGGTGGCAAG+GGG | 0.625265 | 3_1:+84954673 | Msa0382430:CDS |
| AATACCACTAAACTAGTCCA+AGG | 0.627128 | 3_1:-84955020 | None:intergenic |
| AAACAAAGTGGGTCTGCTAG+TGG | 0.628936 | 3_1:+84951454 | Msa0382430:CDS |
| ACAAACCTGGAAGAAAGACC+TGG | 0.629724 | 3_1:-84953756 | None:intergenic |
| GGTGCAAGCAGTGAGAACAT+TGG | 0.629894 | 3_1:+84950808 | Msa0382430:CDS |
| AATCAGGGATCATCATCCAA+AGG | 0.631340 | 3_1:+84950482 | Msa0382430:intron |
| GTGTAAGACTTGAAGTATGG+TGG | 0.634803 | 3_1:+84952053 | Msa0382430:CDS |
| AAAGTGCACTGATAAGCAGA+AGG | 0.636249 | 3_1:-84954876 | None:intergenic |
| ACTTGGTTCAATTTGCCAAG+AGG | 0.637801 | 3_1:+84950859 | Msa0382430:CDS |
| ATAAATGAAAATGAATTGGG+TGG | 0.639637 | 3_1:-84955196 | None:intergenic |
| AGCTCATCCACCGATGAAGG+AGG | 0.640218 | 3_1:-84948995 | None:intergenic |
| AGATAACCCCTCAAATGTCG+AGG | 0.643896 | 3_1:+84951297 | Msa0382430:CDS |
| ACTTGAAGTATGGTGGCCGA+AGG | 0.646361 | 3_1:+84952060 | Msa0382430:CDS |
| CTGCAACCTCGACATTTGAG+GGG | 0.648380 | 3_1:-84951303 | None:intergenic |
| GAGAGGGTCCTCGAAAGCTG+CGG | 0.648640 | 3_1:+84950764 | Msa0382430:CDS |
| AAGTCCACTGTCGACAGTGG+TGG | 0.650146 | 3_1:+84954666 | Msa0382430:CDS |
| GATTGTGAAGGAAAATAACA+GGG | 0.656282 | 3_1:-84948741 | None:intergenic |
| CTAGATTCACCAGAGGACAC+GGG | 0.668586 | 3_1:-84954928 | None:intergenic |
| AGATGTTTCTGCAAGCGAGG+AGG | 0.672748 | 3_1:+84954746 | Msa0382430:CDS |
| TTTGGTCAGAAGTCTACGGG+TGG | 0.672786 | 3_1:+84954357 | Msa0382430:CDS |
| AGGAAATTGGATGATAACGA+GGG | 0.693056 | 3_1:+84951502 | Msa0382430:CDS |
| AAATTGGATGATAACGAGGG+TGG | 0.699562 | 3_1:+84951505 | Msa0382430:CDS |
| CAAGTCAGTCACAAACGATG+GGG | 0.710724 | 3_1:+84950955 | Msa0382430:CDS |
| GAAAAGTCCACTGTCGACAG+TGG | 0.714672 | 3_1:+84954663 | Msa0382430:CDS |
| AACAGCTCTAGATTCACCAG+AGG | 0.719637 | 3_1:-84954935 | None:intergenic |
| AGTTCCGAGTTCCTCACACG+AGG | 0.722443 | 3_1:+84951141 | Msa0382430:CDS |
| TGCAAAGGTCAGATCATGTG+TGG | 0.730397 | 3_1:+84950000 | Msa0382430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAAAAAAATAAAG+GGG | - | chr3_1:84948701-84948720 | None:intergenic | 10.0% |
| !! | GAGAAAAAAAAAAAAATAAA+GGG | - | chr3_1:84948702-84948721 | None:intergenic | 10.0% |
| !! | AGAGAAAAAAAAAAAAATAA+AGG | - | chr3_1:84948703-84948722 | None:intergenic | 10.0% |
| !!! | CATTTTTTTTTTGTTAATAT+AGG | + | chr3_1:84951688-84951707 | Msa0382430:intron | 10.0% |
| !!! | ATTTAAGATATAACTTTAAA+TGG | + | chr3_1:84952937-84952956 | Msa0382430:intron | 10.0% |
| !!! | AAAAATTAGGGTTTTTATTT+GGG | - | chr3_1:84948782-84948801 | None:intergenic | 15.0% |
| !!! | ATTTTCAGTTTTTTTTATTC+TGG | + | chr3_1:84949077-84949096 | Msa0382430:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGTGTCT+TGG | + | chr3_1:84949159-84949178 | Msa0382430:intron | 15.0% |
| !! | ATTATAACAAAGCAAATTTA+GGG | - | chr3_1:84949223-84949242 | None:intergenic | 15.0% |
| !!! | TAAATTTGCTTTGTTATAAT+GGG | + | chr3_1:84949223-84949242 | Msa0382430:intron | 15.0% |
| !!! | TATAAAAGGTTGAATTTTTT+AGG | + | chr3_1:84949499-84949518 | Msa0382430:intron | 15.0% |
| !! | ATATATTAACGATTTAAACA+AGG | - | chr3_1:84950678-84950697 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTAATATAGGAAA+TGG | + | chr3_1:84951694-84951713 | Msa0382430:intron | 15.0% |
| !! | TTATATTCTACAAAATGAAA+AGG | - | chr3_1:84952650-84952669 | None:intergenic | 15.0% |
| !!! | CTTTTAAATAAGAAATTCAT+TGG | - | chr3_1:84952886-84952905 | None:intergenic | 15.0% |
| !! | AAATGCAAACAAAATAATTT+AGG | - | chr3_1:84953521-84953540 | None:intergenic | 15.0% |
| !!! | TGTAAAAACAATTTTTTAAC+AGG | - | chr3_1:84953993-84954012 | None:intergenic | 15.0% |
| !! | GAAAATATGATAGTAAATAA+CGG | - | chr3_1:84954278-84954297 | None:intergenic | 15.0% |
| !!! | AAAATTAGGGTTTTTATTTG+GGG | - | chr3_1:84948781-84948800 | None:intergenic | 20.0% |
| !!! | GAAAAATTAGGGTTTTTATT+TGG | - | chr3_1:84948783-84948802 | None:intergenic | 20.0% |
| !!! | ATTTTTAAAATTCCACTGAT+TGG | - | chr3_1:84949126-84949145 | None:intergenic | 20.0% |
| !! | CATTATAACAAAGCAAATTT+AGG | - | chr3_1:84949224-84949243 | None:intergenic | 20.0% |
| !!! | CTAAATTTGCTTTGTTATAA+TGG | + | chr3_1:84949222-84949241 | Msa0382430:intron | 20.0% |
| !!! | AAATTTGCTTTGTTATAATG+GGG | + | chr3_1:84949224-84949243 | Msa0382430:intron | 20.0% |
| !!! | TGTTGATTATGATATATACT+GGG | - | chr3_1:84949370-84949389 | None:intergenic | 20.0% |
| !!! | ATGTTGATTATGATATATAC+TGG | - | chr3_1:84949371-84949390 | None:intergenic | 20.0% |
| !!! | TTTTTTTGATACAGTTTCAA+TGG | + | chr3_1:84949807-84949826 | Msa0382430:intron | 20.0% |
| !! | CAAATGAAGATACAATTAAT+TGG | - | chr3_1:84949919-84949938 | None:intergenic | 20.0% |
| !!! | TAAACAGTTTTCTTTTAACT+CGG | + | chr3_1:84950293-84950312 | Msa0382430:intron | 20.0% |
| !!! | AAAGCTTTTCATTTGATATT+TGG | + | chr3_1:84950413-84950432 | Msa0382430:intron | 20.0% |
| !!! | TATTTTTCTTGTCATTTTGA+TGG | + | chr3_1:84951971-84951990 | Msa0382430:intron | 20.0% |
| !! | AGGATATTTAAACTAAAAGA+AGG | + | chr3_1:84952556-84952575 | Msa0382430:intron | 20.0% |
| !!! | ATGCTTGTTTTTTCTATTTT+AGG | + | chr3_1:84953202-84953221 | Msa0382430:intron | 20.0% |
| !! | AATTGTCATTAATTTAGACA+CGG | - | chr3_1:84953349-84953368 | None:intergenic | 20.0% |
| !!! | ATTAATGACAATTATTTCTG+TGG | + | chr3_1:84953356-84953375 | Msa0382430:intron | 20.0% |
| !! | AATTAAGCTCCATATAATAA+AGG | - | chr3_1:84953591-84953610 | None:intergenic | 20.0% |
| !! | AATTGGGTTAATAAATCAAA+GGG | + | chr3_1:84953859-84953878 | Msa0382430:intron | 20.0% |
| !! | AATATAATACAGTATGATGT+TGG | - | chr3_1:84954044-84954063 | None:intergenic | 20.0% |
| !! | ACATCATACTGTATTATATT+AGG | + | chr3_1:84954044-84954063 | Msa0382430:intron | 20.0% |
| !!! | AAATTAGGGTTTTTATTTGG+GGG | - | chr3_1:84948780-84948799 | None:intergenic | 25.0% |
| !! | AGGGTTTTACAGAAAAATTA+GGG | - | chr3_1:84948794-84948813 | None:intergenic | 25.0% |
| !! | TAGGGTTTTACAGAAAAATT+AGG | - | chr3_1:84948795-84948814 | None:intergenic | 25.0% |
| ! | ACCCTAATTCTTTCATAAAT+CGG | + | chr3_1:84948809-84948828 | Msa0382430:five_prime_UTR | 25.0% |
| ! | TTTCAATTGAACACTATCAA+TGG | + | chr3_1:84948913-84948932 | Msa0382430:exon | 25.0% |
| ! | ATATTTGATATACCAATCAG+TGG | + | chr3_1:84949111-84949130 | Msa0382430:intron | 25.0% |
| ! | TCATAATCAACATCAATCTT+TGG | + | chr3_1:84949378-84949397 | Msa0382430:intron | 25.0% |
| !! | CTATCTGTGTTTTCATTTTA+TGG | + | chr3_1:84949443-84949462 | Msa0382430:intron | 25.0% |
| ! | AGTAAAACATACAAAAGTCT+TGG | + | chr3_1:84949525-84949544 | Msa0382430:intron | 25.0% |
| ! | TTCATTTGATCATCATCATA+AGG | - | chr3_1:84949775-84949794 | None:intergenic | 25.0% |
| !! | TTATGATGATGATCAAATGA+AGG | + | chr3_1:84949774-84949793 | Msa0382430:CDS | 25.0% |
| ! | ATAACAAAAAATTGCTCCTA+GGG | - | chr3_1:84950099-84950118 | None:intergenic | 25.0% |
| ! | AATAACAAAAAATTGCTCCT+AGG | - | chr3_1:84950100-84950119 | None:intergenic | 25.0% |
| ! | AATAGAACATAAAAGCTCTA+AGG | - | chr3_1:84950274-84950293 | None:intergenic | 25.0% |
| !!! | AAACAGTTTTCTTTTAACTC+GGG | + | chr3_1:84950294-84950313 | Msa0382430:intron | 25.0% |
| ! | TATTTGGAGAAATTTATACG+TGG | + | chr3_1:84950429-84950448 | Msa0382430:intron | 25.0% |
| ! | ATTTGGAGAAATTTATACGT+GGG | + | chr3_1:84950430-84950449 | Msa0382430:intron | 25.0% |
| ! | ACTCAAAATCATAATCTACT+AGG | - | chr3_1:84950650-84950669 | None:intergenic | 25.0% |
| ! | ATCTTCAGATGATTTGATAT+CGG | - | chr3_1:84951735-84951754 | None:intergenic | 25.0% |
| !!! | TGATGTATTGATTAGGATTT+AGG | + | chr3_1:84951879-84951898 | Msa0382430:intron | 25.0% |
| !!! | GATGTATTGATTAGGATTTA+GGG | + | chr3_1:84951880-84951899 | Msa0382430:intron | 25.0% |
| !!! | ATTTAGGGTACATTTTCTTT+TGG | + | chr3_1:84951895-84951914 | Msa0382430:intron | 25.0% |
| !!! | ATATCTAGTTTTTGCATACA+TGG | + | chr3_1:84952205-84952224 | Msa0382430:intron | 25.0% |
| ! | ATGAAATCACACAAAACATT+AGG | - | chr3_1:84952267-84952286 | None:intergenic | 25.0% |
| ! | ACAAATATATGATTGTTTGC+AGG | + | chr3_1:84952687-84952706 | Msa0382430:intron | 25.0% |
| ! | ATAGACCATAAAGAATAGAA+GGG | - | chr3_1:84952801-84952820 | None:intergenic | 25.0% |
| ! | AATAGACCATAAAGAATAGA+AGG | - | chr3_1:84952802-84952821 | None:intergenic | 25.0% |
| ! | ATTCTTTATGGTCTATTGTA+TGG | + | chr3_1:84952805-84952824 | Msa0382430:intron | 25.0% |
| !! | GAAAGCACAAAAAAAATCTT+CGG | - | chr3_1:84953083-84953102 | None:intergenic | 25.0% |
| ! | TATTAAGCTAGAAACTAGAA+AGG | + | chr3_1:84953104-84953123 | Msa0382430:intron | 25.0% |
| !!! | CTTGTTTTTTCTATTTTAGG+TGG | + | chr3_1:84953205-84953224 | Msa0382430:intron | 25.0% |
| ! | AAAGATTATGGTGTAATGTA+AGG | - | chr3_1:84953325-84953344 | None:intergenic | 25.0% |
| ! | ATTGTCATTAATTTAGACAC+GGG | - | chr3_1:84953348-84953367 | None:intergenic | 25.0% |
| ! | AACAAGACCAAATTAAGAAA+CGG | - | chr3_1:84953651-84953670 | None:intergenic | 25.0% |
| !!! | TCTTAATTTGGTCTTGTTTA+TGG | + | chr3_1:84953653-84953672 | Msa0382430:intron | 25.0% |
| ! | TATATTGATATTGACAAACC+TGG | - | chr3_1:84953772-84953791 | None:intergenic | 25.0% |
| ! | AATTGGACATATCAGAAAAA+AGG | - | chr3_1:84953812-84953831 | None:intergenic | 25.0% |
| ! | CAATTGGGTTAATAAATCAA+AGG | + | chr3_1:84953858-84953877 | Msa0382430:intron | 25.0% |
| ! | ATTCAATGACAATGTATTGA+TGG | + | chr3_1:84953945-84953964 | Msa0382430:intron | 25.0% |
| ! | TCATACTGTATTATATTAGG+AGG | + | chr3_1:84954047-84954066 | Msa0382430:intron | 25.0% |
| ! | TTCATTGAAGAAAAAAGACT+TGG | + | chr3_1:84954704-84954723 | Msa0382430:CDS | 25.0% |
| ! | AACTAGATAAGGAAAAATCA+AGG | - | chr3_1:84954851-84954870 | None:intergenic | 25.0% |
| ! | TGAAAACAGCTAAAATCATT+TGG | + | chr3_1:84955110-84955129 | Msa0382430:three_prime_UTR | 25.0% |
| GATTGTGAAGGAAAATAACA+GGG | - | chr3_1:84948744-84948763 | None:intergenic | 30.0% | |
| TGATTGTGAAGGAAAATAAC+AGG | - | chr3_1:84948745-84948764 | None:intergenic | 30.0% | |
| !!! | TTTTGTTTTGGTGATTGTGA+AGG | - | chr3_1:84948756-84948775 | None:intergenic | 30.0% |
| !! | TTATTTGGGGGTTTTTGTTT+TGG | - | chr3_1:84948768-84948787 | None:intergenic | 30.0% |
| ! | GCCGATTTATGAAAGAATTA+GGG | - | chr3_1:84948813-84948832 | None:intergenic | 30.0% |
| ! | AGCCGATTTATGAAAGAATT+AGG | - | chr3_1:84948814-84948833 | None:intergenic | 30.0% |
| ! | ATTCTTTCATAAATCGGCTT+CGG | + | chr3_1:84948815-84948834 | Msa0382430:five_prime_UTR | 30.0% |
| !!! | TTTTTTGTGTCTTGGATGTT+TGG | + | chr3_1:84949167-84949186 | Msa0382430:intron | 30.0% |
| ATAATAACTAGTGTGATACG+CGG | - | chr3_1:84949335-84949354 | None:intergenic | 30.0% | |
| AAACACAGATAGTTCCATTT+GGG | - | chr3_1:84949435-84949454 | None:intergenic | 30.0% | |
| AAAACACAGATAGTTCCATT+TGG | - | chr3_1:84949436-84949455 | None:intergenic | 30.0% | |
| GATTCATGACACAGTATAAA+AGG | + | chr3_1:84949485-84949504 | Msa0382430:intron | 30.0% | |
| CATCTATGAAAGAATTGGTT+GGG | + | chr3_1:84949659-84949678 | Msa0382430:CDS | 30.0% | |
| ATCTATGAAAGAATTGGTTG+GGG | + | chr3_1:84949660-84949679 | Msa0382430:CDS | 30.0% | |
| ! | ATCATCATCATAAGGAGTAT+CGG | - | chr3_1:84949767-84949786 | None:intergenic | 30.0% |
| ! | TGCTAATGAATTTTTCTTGC+AGG | + | chr3_1:84949886-84949905 | Msa0382430:intron | 30.0% |
| !!! | AGCATTTTTTGAAGACCATA+AGG | + | chr3_1:84950068-84950087 | Msa0382430:CDS | 30.0% |
| ATGTGAATGTAGCAACTATA+TGG | - | chr3_1:84950202-84950221 | None:intergenic | 30.0% | |
| !! | AACAGTTTTCTTTTAACTCG+GGG | + | chr3_1:84950295-84950314 | Msa0382430:intron | 30.0% |
| TTTGGAGAAATTTATACGTG+GGG | + | chr3_1:84950431-84950450 | Msa0382430:intron | 30.0% | |
| ATGGATGAAAAAACATCCTT+TGG | - | chr3_1:84950501-84950520 | None:intergenic | 30.0% | |
| !!! | AAAGGATGTTTTTTCATCCA+TGG | + | chr3_1:84950500-84950519 | Msa0382430:CDS | 30.0% |
| ATTAAGAAAAACAACGAGGT+TGG | + | chr3_1:84950597-84950616 | Msa0382430:intron | 30.0% | |
| ! | GTCATTGTTATTAATCATCG+TGG | + | chr3_1:84950706-84950725 | Msa0382430:intron | 30.0% |
| ! | TTCCCATTTCGATTATCTTT+TGG | - | chr3_1:84950926-84950945 | None:intergenic | 30.0% |
| ! | GAATCAATCATCTTTTCAGA+TGG | - | chr3_1:84951103-84951122 | None:intergenic | 30.0% |
| CAATGTTGAATCTCAAGTTA+TGG | + | chr3_1:84951204-84951223 | Msa0382430:CDS | 30.0% | |
| GAAAATCATTCAGAGAAACT+TGG | + | chr3_1:84951259-84951278 | Msa0382430:CDS | 30.0% | |
| !! | GTTTCAAAAAAGGTATCTGA+AGG | + | chr3_1:84951331-84951350 | Msa0382430:CDS | 30.0% |
| ATTCAGGCAAAAAACAAAGT+GGG | + | chr3_1:84951443-84951462 | Msa0382430:CDS | 30.0% | |
| ATCTGAAGATGAAAAGTTAG+AGG | + | chr3_1:84951745-84951764 | Msa0382430:CDS | 30.0% | |
| !! | CATGATGTGATGTATTGATT+AGG | + | chr3_1:84951872-84951891 | Msa0382430:intron | 30.0% |
| GCATGTCAAAAATTCAGAAA+TGG | - | chr3_1:84952110-84952129 | None:intergenic | 30.0% | |
| !!! | TTAAGAGATTTTGGCTAACA+AGG | + | chr3_1:84952134-84952153 | Msa0382430:intron | 30.0% |
| !!! | TAAGAGATTTTGGCTAACAA+GGG | + | chr3_1:84952135-84952154 | Msa0382430:intron | 30.0% |
| ! | AATCATTGTGTAGACCTTTT+TGG | + | chr3_1:84952320-84952339 | Msa0382430:intron | 30.0% |
| ACTATTGCAGTTTACAATAC+AGG | - | chr3_1:84952395-84952414 | None:intergenic | 30.0% | |
| AAAACATTGATGTGGAATTG+TGG | + | chr3_1:84952530-84952549 | Msa0382430:intron | 30.0% | |
| AAACATTGATGTGGAATTGT+GGG | + | chr3_1:84952531-84952550 | Msa0382430:intron | 30.0% | |
| ! | ATTGTTTGCAGGTTTTACAA+AGG | + | chr3_1:84952698-84952717 | Msa0382430:intron | 30.0% |
| ! | TTTTCGCAAAAAGAAACACA+AGG | + | chr3_1:84952739-84952758 | Msa0382430:CDS | 30.0% |
| TAGACCATAAAGAATAGAAG+GGG | - | chr3_1:84952800-84952819 | None:intergenic | 30.0% | |
| ! | TCTGATTATTTCTTCTCCTT+TGG | + | chr3_1:84952830-84952849 | Msa0382430:intron | 30.0% |
| !!! | GTTGGGGTTTATTCTTTTTT+GGG | - | chr3_1:84953061-84953080 | None:intergenic | 30.0% |
| ACAAAAAAAATCTTCGGTTG+GGG | - | chr3_1:84953077-84953096 | None:intergenic | 30.0% | |
| CACAAAAAAAATCTTCGGTT+GGG | - | chr3_1:84953078-84953097 | None:intergenic | 30.0% | |
| ! | TTGAAGTATTAAATCTTGCC+AGG | + | chr3_1:84953246-84953265 | Msa0382430:CDS | 30.0% |
| ! | TGAAGTATTAAATCTTGCCA+GGG | + | chr3_1:84953247-84953266 | Msa0382430:CDS | 30.0% |
| TAAGCTCCATATAATAAAGG+AGG | - | chr3_1:84953588-84953607 | None:intergenic | 30.0% | |
| AAATTAAGAAACGGCAAGAA+AGG | - | chr3_1:84953642-84953661 | None:intergenic | 30.0% | |
| ! | TTTCTTGCCGTTTCTTAATT+TGG | + | chr3_1:84953641-84953660 | Msa0382430:intron | 30.0% |
| ATTGTTCTTTGATCCTATTC+AGG | + | chr3_1:84953679-84953698 | Msa0382430:intron | 30.0% | |
| ! | GATATGTCCAATTTTCTACT+TGG | + | chr3_1:84953819-84953838 | Msa0382430:intron | 30.0% |
| GACAAATCCAAGTAGAAAAT+TGG | - | chr3_1:84953829-84953848 | None:intergenic | 30.0% | |
| ATCAGGATCAAGTAAATCAA+AGG | + | chr3_1:84954323-84954342 | Msa0382430:CDS | 30.0% | |
| TCAGGATCAAGTAAATCAAA+GGG | + | chr3_1:84954324-84954343 | Msa0382430:CDS | 30.0% | |
| TGAAGTTAGCAGAAAGTTTA+AGG | + | chr3_1:84954422-84954441 | Msa0382430:CDS | 30.0% | |
| ATTGAAGAAAAAAGACTTGG+AGG | + | chr3_1:84954707-84954726 | Msa0382430:CDS | 30.0% | |
| ! | TGAATCTAGAGCTGTTTATT+AGG | + | chr3_1:84954942-84954961 | Msa0382430:three_prime_UTR | 30.0% |
| AAAAATAAAGGGGAGAGAGA+GGG | - | chr3_1:84948691-84948710 | None:intergenic | 35.0% | |
| AAAAAATAAAGGGGAGAGAG+AGG | - | chr3_1:84948692-84948711 | None:intergenic | 35.0% | |
| ATTCAGTGCAAGATCTGAAA+AGG | + | chr3_1:84948887-84948906 | Msa0382430:five_prime_UTR | 35.0% | |
| TTCAGTGCAAGATCTGAAAA+GGG | + | chr3_1:84948888-84948907 | Msa0382430:five_prime_UTR | 35.0% | |
| ATCAATGGCGTTTGATCAAA+AGG | + | chr3_1:84948928-84948947 | Msa0382430:exon | 35.0% | |
| !!! | GGGTTTTGAAAGTGACAATT+TGG | - | chr3_1:84949203-84949222 | None:intergenic | 35.0% |
| ATTTGCATATCTATTCGCAC+TGG | + | chr3_1:84949293-84949312 | Msa0382430:intron | 35.0% | |
| !! | CAACATCAATCTTTGGTGTT+TGG | + | chr3_1:84949385-84949404 | Msa0382430:intron | 35.0% |
| ! | TCATTTTATGGTGTAAGCTC+TGG | + | chr3_1:84949455-84949474 | Msa0382430:intron | 35.0% |
| ! | CATTTTATGGTGTAAGCTCT+GGG | + | chr3_1:84949456-84949475 | Msa0382430:intron | 35.0% |
| ! | ATCTGATCTAATCTTTTCCC+TGG | + | chr3_1:84949560-84949579 | Msa0382430:intron | 35.0% |
| ! | TCTGATCTAATCTTTTCCCT+GGG | + | chr3_1:84949561-84949580 | Msa0382430:intron | 35.0% |
| ACTTGAGAGTTACTTAGCAA+AGG | + | chr3_1:84949594-84949613 | Msa0382430:CDS | 35.0% | |
| TGCTCCATCTATGAAAGAAT+TGG | + | chr3_1:84949654-84949673 | Msa0382430:CDS | 35.0% | |
| CCAACCAATTCTTTCATAGA+TGG | - | chr3_1:84949661-84949680 | None:intergenic | 35.0% | |
| CCATCTATGAAAGAATTGGT+TGG | + | chr3_1:84949658-84949677 | Msa0382430:CDS | 35.0% | |
| ! | TGGTTGGGGATAAACTTTTA+AGG | + | chr3_1:84949674-84949693 | Msa0382430:CDS | 35.0% |
| !!! | GGATAAACTTTTAAGGCATC+CGG | + | chr3_1:84949681-84949700 | Msa0382430:CDS | 35.0% |
| !! | TCATCATCATAAGGAGTATC+GGG | - | chr3_1:84949766-84949785 | None:intergenic | 35.0% |
| GACAGATCAGATCAAATTTG+AGG | - | chr3_1:84950173-84950192 | None:intergenic | 35.0% | |
| ! | ACCAAACATCTCAAGCTTTT+GGG | + | chr3_1:84950227-84950246 | Msa0382430:intron | 35.0% |
| !! | ATCTCAAGCTTTTGGGAAAT+TGG | + | chr3_1:84950234-84950253 | Msa0382430:intron | 35.0% |
| !! | TCTCAAGCTTTTGGGAAATT+GGG | + | chr3_1:84950235-84950254 | Msa0382430:intron | 35.0% |
| !! | ACAGTTTTCTTTTAACTCGG+GGG | + | chr3_1:84950296-84950315 | Msa0382430:intron | 35.0% |
| TTGGAGAAATTTATACGTGG+GGG | + | chr3_1:84950432-84950451 | Msa0382430:intron | 35.0% | |
| ! | GATGATCCCTGATTTTCAAA+TGG | - | chr3_1:84950476-84950495 | None:intergenic | 35.0% |
| AAGTGTCATAATGGTTTCCA+TGG | - | chr3_1:84950520-84950539 | None:intergenic | 35.0% | |
| CTCAAGAACAAGTGTCATAA+TGG | - | chr3_1:84950529-84950548 | None:intergenic | 35.0% | |
| CATTATGACACTTGTTCTTG+AGG | + | chr3_1:84950527-84950546 | Msa0382430:CDS | 35.0% | |
| ! | TGTTTTTCTTAATGCTCTCC+AGG | - | chr3_1:84950590-84950609 | None:intergenic | 35.0% |
| GAGCATTAAGAAAAACAACG+AGG | + | chr3_1:84950593-84950612 | Msa0382430:CDS | 35.0% | |
| ! | GATGATTACAGTGAAGTACT+TGG | + | chr3_1:84950842-84950861 | Msa0382430:CDS | 35.0% |
| TCGCCAAAAGATAATCGAAA+TGG | + | chr3_1:84950920-84950939 | Msa0382430:CDS | 35.0% | |
| CGCCAAAAGATAATCGAAAT+GGG | + | chr3_1:84950921-84950940 | Msa0382430:CDS | 35.0% | |
| AGATGAGGAGTTCAATGATT+TGG | + | chr3_1:84950994-84951013 | Msa0382430:CDS | 35.0% | |
| ! | TCTCTGAATGATTTTCGTCA+GGG | - | chr3_1:84951255-84951274 | None:intergenic | 35.0% |
| ! | TTCTCTGAATGATTTTCGTC+AGG | - | chr3_1:84951256-84951275 | None:intergenic | 35.0% |
| GATTCAGGCAAAAAACAAAG+TGG | + | chr3_1:84951442-84951461 | Msa0382430:CDS | 35.0% | |
| ! | AGGAAATTGGATGATAACGA+GGG | + | chr3_1:84951502-84951521 | Msa0382430:CDS | 35.0% |
| AGCTGGTAGATAAGAAAAAG+CGG | + | chr3_1:84951548-84951567 | Msa0382430:CDS | 35.0% | |
| ATTCTTTCTGTAGATACGTC+TGG | + | chr3_1:84951921-84951940 | Msa0382430:intron | 35.0% | |
| AAGTTCTGTGATTGCTAACT+AGG | - | chr3_1:84951951-84951970 | None:intergenic | 35.0% | |
| GAACATGATCAAAACCTTGT+CGG | + | chr3_1:84952031-84952050 | Msa0382430:CDS | 35.0% | |
| ! | CATGCTGTCTTAAGAGATTT+TGG | + | chr3_1:84952125-84952144 | Msa0382430:intron | 35.0% |
| ! | CAACGACATATTGACTATTG+TGG | + | chr3_1:84952446-84952465 | Msa0382430:intron | 35.0% |
| GCAGTTCAGAAACAGTAATT+TGG | - | chr3_1:84952479-84952498 | None:intergenic | 35.0% | |
| ACTGTGAGAAAACATTGATG+TGG | + | chr3_1:84952522-84952541 | Msa0382430:intron | 35.0% | |
| AAAAGAAACACAAGGTGACT+TGG | + | chr3_1:84952747-84952766 | Msa0382430:intron | 35.0% | |
| TTGGAAGAAATAGTCAGAGT+GGG | - | chr3_1:84952867-84952886 | None:intergenic | 35.0% | |
| ATTGGAAGAAATAGTCAGAG+TGG | - | chr3_1:84952868-84952887 | None:intergenic | 35.0% | |
| TGAATGTGTGTGTCTACTTT+AGG | + | chr3_1:84952908-84952927 | Msa0382430:intron | 35.0% | |
| GAATGTGTGTGTCTACTTTA+GGG | + | chr3_1:84952909-84952928 | Msa0382430:intron | 35.0% | |
| ! | ACATGCTAGATTTGAAATCC+TGG | + | chr3_1:84952972-84952991 | Msa0382430:intron | 35.0% |
| ! | CATGCTAGATTTGAAATCCT+GGG | + | chr3_1:84952973-84952992 | Msa0382430:intron | 35.0% |
| !!! | GGTTGGGGTTTATTCTTTTT+TGG | - | chr3_1:84953062-84953081 | None:intergenic | 35.0% |
| GCACAAAAAAAATCTTCGGT+TGG | - | chr3_1:84953079-84953098 | None:intergenic | 35.0% | |
| AAGCTAGAAACTAGAAAGGT+TGG | + | chr3_1:84953108-84953127 | Msa0382430:intron | 35.0% | |
| !! | TTTTAGGTGGTTTATGACGA+TGG | + | chr3_1:84953218-84953237 | Msa0382430:intron | 35.0% |
| TTTAGACACGGGAAAGATTA+TGG | - | chr3_1:84953337-84953356 | None:intergenic | 35.0% | |
| !! | TGACAATTATTTCTGTGGAC+AGG | + | chr3_1:84953361-84953380 | Msa0382430:intron | 35.0% |
| ATGCAACACATACATTTCAG+TGG | - | chr3_1:84953420-84953439 | None:intergenic | 35.0% | |
| CACGTTCCTCCTTTATTATA+TGG | + | chr3_1:84953579-84953598 | Msa0382430:intron | 35.0% | |
| GCTTAATTGAATGTGTCTTG+TGG | + | chr3_1:84953603-84953622 | Msa0382430:intron | 35.0% | |
| TGGACATATCAGAAAAAAGG+TGG | - | chr3_1:84953809-84953828 | None:intergenic | 35.0% | |
| ! | TTTTCTACTTGGATTTGTCG+TGG | + | chr3_1:84953830-84953849 | Msa0382430:intron | 35.0% |
| TTTCTACTTGGATTTGTCGT+GGG | + | chr3_1:84953831-84953850 | Msa0382430:intron | 35.0% | |
| !!! | GTTGTTTGTGCAGTTTTAGA+GGG | + | chr3_1:84954069-84954088 | Msa0382430:intron | 35.0% |
| GATTTACTGCTACCACTTAT+AGG | - | chr3_1:84954456-84954475 | None:intergenic | 35.0% | |
| ACTGGTAAATCCAAGAACAT+TGG | + | chr3_1:84954492-84954511 | Msa0382430:CDS | 35.0% | |
| TTCCAAGACAAGCAAAAGAA+AGG | + | chr3_1:84954518-84954537 | Msa0382430:CDS | 35.0% | |
| ! | ATCCTTTCTTTTGCTTGTCT+TGG | - | chr3_1:84954523-84954542 | None:intergenic | 35.0% |
| ! | TTAGACTTGACTGAAGGTTT+TGG | - | chr3_1:84954561-84954580 | None:intergenic | 35.0% |
| TTTGGATATTCCACTCTTTG+GGG | - | chr3_1:84954592-84954611 | None:intergenic | 35.0% | |
| GTTTGGATATTCCACTCTTT+GGG | - | chr3_1:84954593-84954612 | None:intergenic | 35.0% | |
| TGTTTGGATATTCCACTCTT+TGG | - | chr3_1:84954594-84954613 | None:intergenic | 35.0% | |
| !!! | AGTCTTTGGGGTTTTTTGTT+TGG | - | chr3_1:84954610-84954629 | None:intergenic | 35.0% |
| !!! | TGGACTTTTCACCACTTTTT+GGG | - | chr3_1:84954653-84954672 | None:intergenic | 35.0% |
| GATACAAAAGTCAAGACATC+AGG | + | chr3_1:84954774-84954793 | Msa0382430:CDS | 35.0% | |
| GTGCACTTTCTTACAACATT+TGG | + | chr3_1:84954890-84954909 | Msa0382430:three_prime_UTR | 35.0% | |
| TAACAACAATGAGCTGATCA+CGG | - | chr3_1:84954985-84955004 | None:intergenic | 35.0% | |
| TATGATAGCATTGCTATCCT+TGG | + | chr3_1:84955003-84955022 | Msa0382430:three_prime_UTR | 35.0% | |
| AATACCACTAAACTAGTCCA+AGG | - | chr3_1:84955023-84955042 | None:intergenic | 35.0% | |
| !! | GGACTAGTTTAGTGGTATTT+CGG | + | chr3_1:84955024-84955043 | Msa0382430:three_prime_UTR | 35.0% |
| !! | GACTAGTTTAGTGGTATTTC+GGG | + | chr3_1:84955025-84955044 | Msa0382430:three_prime_UTR | 35.0% |
| TCCATCTAGTCTAGAAACAA+CGG | - | chr3_1:84955082-84955101 | None:intergenic | 35.0% | |
| !! | TTGTTTCTAGACTAGATGGA+TGG | + | chr3_1:84955082-84955101 | Msa0382430:three_prime_UTR | 35.0% |
| ! | CCAAAGCATTCATTCAATGA+AGG | - | chr3_1:84955143-84955162 | None:intergenic | 35.0% |
| CCTTCATTGAATGAATGCTT+TGG | + | chr3_1:84955140-84955159 | Msa0382430:three_prime_UTR | 35.0% | |
| !!! | TTGGCTCTAGTTTTCAATAC+TGG | + | chr3_1:84955159-84955178 | Msa0382430:three_prime_UTR | 35.0% |
| CTCTACTCAGCTTCGAAAAA+TGG | - | chr3_1:84948860-84948879 | None:intergenic | 40.0% | |
| AAGAGCAGCTTATTCAAGCT+GGG | + | chr3_1:84948957-84948976 | Msa0382430:CDS | 40.0% | |
| TGAGAGTTACTTAGCAAAGG+TGG | + | chr3_1:84949597-84949616 | Msa0382430:CDS | 40.0% | |
| TTACTTAGCAAAGGTGGAAC+AGG | + | chr3_1:84949603-84949622 | Msa0382430:CDS | 40.0% | |
| TGTGATTTCACTGATGCAAG+CGG | - | chr3_1:84949731-84949750 | None:intergenic | 40.0% | |
| TAAAGTGCATGACAACAGAC+AGG | - | chr3_1:84949833-84949852 | None:intergenic | 40.0% | |
| TTCTCCTATTCTCGTACGAT+CGG | - | chr3_1:84949964-84949983 | None:intergenic | 40.0% | |
| AATCCTCGAAACTGTTGCAA+AGG | + | chr3_1:84949985-84950004 | Msa0382430:CDS | 40.0% | |
| ! | CAGATCATGTGTGGTAATGT+TGG | + | chr3_1:84950009-84950028 | Msa0382430:CDS | 40.0% |
| AAATCAGCGCATCACATTCA+AGG | - | chr3_1:84950036-84950055 | None:intergenic | 40.0% | |
| !!! | TGAATGTGATGCGCTGATTT+TGG | + | chr3_1:84950036-84950055 | Msa0382430:CDS | 40.0% |
| ATTCAAGTCCAGCACTATCA+TGG | + | chr3_1:84950117-84950136 | Msa0382430:intron | 40.0% | |
| TTCAAGTCCAGCACTATCAT+GGG | + | chr3_1:84950118-84950137 | Msa0382430:intron | 40.0% | |
| ! | CACCAAACATCTCAAGCTTT+TGG | + | chr3_1:84950226-84950245 | Msa0382430:intron | 40.0% |
| TCCCAAAAGCTTGAGATGTT+TGG | - | chr3_1:84950231-84950250 | None:intergenic | 40.0% | |
| !! | TTTTGGGAAATTGGGAGAGT+TGG | + | chr3_1:84950243-84950262 | Msa0382430:intron | 40.0% |
| !! | TCTTTTAACTCGGGGGATAA+AGG | + | chr3_1:84950303-84950322 | Msa0382430:intron | 40.0% |
| !! | CTTTTAACTCGGGGGATAAA+GGG | + | chr3_1:84950304-84950323 | Msa0382430:intron | 40.0% |
| ! | TCCAGGTAAAAGCATGTGAA+CGG | - | chr3_1:84950354-84950373 | None:intergenic | 40.0% |
| ACCTGGAAACTCAAGTTCTT+AGG | + | chr3_1:84950367-84950386 | Msa0382430:intron | 40.0% | |
| TCCTAAGAACTTGAGTTTCC+AGG | - | chr3_1:84950371-84950390 | None:intergenic | 40.0% | |
| ACCAGCTCCATTTGAAAATC+AGG | + | chr3_1:84950466-84950485 | Msa0382430:intron | 40.0% | |
| CCAGCTCCATTTGAAAATCA+GGG | + | chr3_1:84950467-84950486 | Msa0382430:intron | 40.0% | |
| AATCAGGGATCATCATCCAA+AGG | + | chr3_1:84950482-84950501 | Msa0382430:intron | 40.0% | |
| GAGTGGAGAAAGCAAATCAA+AGG | - | chr3_1:84950568-84950587 | None:intergenic | 40.0% | |
| GTTATTAATCATCGTGGTCC+AGG | + | chr3_1:84950712-84950731 | Msa0382430:intron | 40.0% | |
| GAGAACATTGGGTATATCTC+TGG | + | chr3_1:84950820-84950839 | Msa0382430:CDS | 40.0% | |
| ACTTGGTTCAATTTGCCAAG+AGG | + | chr3_1:84950859-84950878 | Msa0382430:CDS | 40.0% | |
| AATTTGCCAAGAGGAAGCTA+AGG | + | chr3_1:84950868-84950887 | Msa0382430:CDS | 40.0% | |
| ! | GAGGAGTTCAATGATTTGGA+TGG | + | chr3_1:84950998-84951017 | Msa0382430:CDS | 40.0% |
| GCAGATTTCGTTGAATGACT+CGG | - | chr3_1:84951076-84951095 | None:intergenic | 40.0% | |
| TAACTGCATAAGCAACTTCC+TGG | - | chr3_1:84951168-84951187 | None:intergenic | 40.0% | |
| ! | TGCAGAGGCTGTTTCAAAAA+AGG | + | chr3_1:84951321-84951340 | Msa0382430:CDS | 40.0% |
| TCAGGCGTAAAAAAAACTGC+TGG | + | chr3_1:84951415-84951434 | Msa0382430:CDS | 40.0% | |
| AAAACTGCTGGTACAGATTC+AGG | + | chr3_1:84951427-84951446 | Msa0382430:CDS | 40.0% | |
| CTCGTTATCATCCAATTTCC+TGG | - | chr3_1:84951503-84951522 | None:intergenic | 40.0% | |
| ! | CAGGAAATTGGATGATAACG+AGG | + | chr3_1:84951501-84951520 | Msa0382430:CDS | 40.0% |
| ! | AAATTGGATGATAACGAGGG+TGG | + | chr3_1:84951505-84951524 | Msa0382430:CDS | 40.0% |
| GCTGGTAGATAAGAAAAAGC+GGG | + | chr3_1:84951549-84951568 | Msa0382430:CDS | 40.0% | |
| CTGGTAGATAAGAAAAAGCG+GGG | + | chr3_1:84951550-84951569 | Msa0382430:CDS | 40.0% | |
| TGGTAGATAAGAAAAAGCGG+GGG | + | chr3_1:84951551-84951570 | Msa0382430:CDS | 40.0% | |
| AGGAAATGGTTTCTTCTCCA+AGG | + | chr3_1:84951708-84951727 | Msa0382430:intron | 40.0% | |
| GATGATTTGATATCGGACCT+TGG | - | chr3_1:84951728-84951747 | None:intergenic | 40.0% | |
| TTTCCTCTTTCCATTTGTCG+TGG | - | chr3_1:84951777-84951796 | None:intergenic | 40.0% | |
| !!! | ACACACATTTTTTCTTCCCG+AGG | - | chr3_1:84951804-84951823 | None:intergenic | 40.0% |
| CTAATTGTCTTGCTGCTATC+AGG | + | chr3_1:84951994-84952013 | Msa0382430:intron | 40.0% | |
| CTATCAGGAGTCTGATATCA+TGG | + | chr3_1:84952009-84952028 | Msa0382430:intron | 40.0% | |
| TCGGTGTAAGACTTGAAGTA+TGG | + | chr3_1:84952050-84952069 | Msa0382430:CDS | 40.0% | |
| GTGTAAGACTTGAAGTATGG+TGG | + | chr3_1:84952053-84952072 | Msa0382430:CDS | 40.0% | |
| AGTACTTACTGACGATCCTT+CGG | - | chr3_1:84952079-84952098 | None:intergenic | 40.0% | |
| !! | AGGGAGTGTTATATACTGTG+TGG | + | chr3_1:84952161-84952180 | Msa0382430:intron | 40.0% |
| CCATGATAACATCGCCAAAA+AGG | - | chr3_1:84952337-84952356 | None:intergenic | 40.0% | |
| !! | CCTTTTTGGCGATGTTATCA+TGG | + | chr3_1:84952334-84952353 | Msa0382430:intron | 40.0% |
| CGATGTTATCATGGTCTTCA+TGG | + | chr3_1:84952343-84952362 | Msa0382430:intron | 40.0% | |
| TTGATGTGGAATTGTGGGAA+AGG | + | chr3_1:84952536-84952555 | Msa0382430:intron | 40.0% | |
| CCATAAAGAATAGAAGGGGA+GGG | - | chr3_1:84952796-84952815 | None:intergenic | 40.0% | |
| ACCATAAAGAATAGAAGGGG+AGG | - | chr3_1:84952797-84952816 | None:intergenic | 40.0% | |
| GTGGGACAATTACTATCCAA+AGG | - | chr3_1:84952849-84952868 | None:intergenic | 40.0% | |
| TAAATCTTGCCAGGGAAAAG+TGG | + | chr3_1:84953255-84953274 | Msa0382430:CDS | 40.0% | |
| !! | AATGATGTTCCACTTTTCCC+TGG | - | chr3_1:84953267-84953286 | None:intergenic | 40.0% |
| GCAAGAAAGGCAGATCATAT+TGG | - | chr3_1:84953629-84953648 | None:intergenic | 40.0% | |
| !!! | GGTTTTGTTTTCTTCCTTGC+AGG | - | chr3_1:84953705-84953724 | None:intergenic | 40.0% |
| ! | TTAGTTGGTTCATCGGAACT+TGG | - | chr3_1:84953726-84953745 | None:intergenic | 40.0% |
| ! | TCCTTGCTTAGTTGGTTCAT+CGG | - | chr3_1:84953733-84953752 | None:intergenic | 40.0% |
| TTCTACTTGGATTTGTCGTG+GGG | + | chr3_1:84953832-84953851 | Msa0382430:intron | 40.0% | |
| !! | GGTTGTTTGTGCAGTTTTAG+AGG | + | chr3_1:84954068-84954087 | Msa0382430:intron | 40.0% |
| ! | TTTCCTCCTTCGATTTGTAG+TGG | + | chr3_1:84954294-84954313 | Msa0382430:intron | 40.0% |
| ! | TCAAAGGGTGTACTGAAGTT+TGG | + | chr3_1:84954339-84954358 | Msa0382430:CDS | 40.0% |
| GAAGTTTGGTCAGAAGTCTA+CGG | + | chr3_1:84954353-84954372 | Msa0382430:CDS | 40.0% | |
| AAGTTTGGTCAGAAGTCTAC+GGG | + | chr3_1:84954354-84954373 | Msa0382430:CDS | 40.0% | |
| CTCAGAATCACTAACAGTCT+TGG | - | chr3_1:84954400-84954419 | None:intergenic | 40.0% | |
| CAAGACTGTTAGTGATTCTG+AGG | + | chr3_1:84954398-84954417 | Msa0382430:CDS | 40.0% | |
| GGTAAATCCAAGAACATTGG+TGG | + | chr3_1:84954495-84954514 | Msa0382430:CDS | 40.0% | |
| !!! | GACTTTTCACCACTTTTTGG+GGG | - | chr3_1:84954651-84954670 | None:intergenic | 40.0% |
| !!! | GGACTTTTCACCACTTTTTG+GGG | - | chr3_1:84954652-84954671 | None:intergenic | 40.0% |
| !! | GTGGACTTTTCACCACTTTT+TGG | - | chr3_1:84954654-84954673 | None:intergenic | 40.0% |
| AGAAGGCAAGCAACTAGATA+AGG | - | chr3_1:84954862-84954881 | None:intergenic | 40.0% | |
| ! | AAAGTGCACTGATAAGCAGA+AGG | - | chr3_1:84954879-84954898 | None:intergenic | 40.0% |
| ACATTTGGACATTCTTTCCC+TGG | + | chr3_1:84954905-84954924 | Msa0382430:three_prime_UTR | 40.0% | |
| !! | CTATCCTTGGACTAGTTTAG+TGG | + | chr3_1:84955016-84955035 | Msa0382430:three_prime_UTR | 40.0% |
| !! | TAGTGGTATTTCGGGTTAGT+AGG | + | chr3_1:84955033-84955052 | Msa0382430:three_prime_UTR | 40.0% |
| !! | AGTGGTATTTCGGGTTAGTA+GGG | + | chr3_1:84955034-84955053 | Msa0382430:three_prime_UTR | 40.0% |
| !! | TCCGTTGTTTCTAGACTAGA+TGG | + | chr3_1:84955078-84955097 | Msa0382430:three_prime_UTR | 40.0% |
| CAATACTGGCAGATGTTTAC+CGG | + | chr3_1:84955173-84955192 | Msa0382430:three_prime_UTR | 40.0% | |
| GGCGTTTGATCAAAAGGAAC+TGG | + | chr3_1:84948934-84948953 | Msa0382430:CDS | 45.0% | |
| GAAGAGCAGCTTATTCAAGC+TGG | + | chr3_1:84948956-84948975 | Msa0382430:CDS | 45.0% | |
| !! | TTATGGTGTAAGCTCTGGGA+TGG | + | chr3_1:84949460-84949479 | Msa0382430:intron | 45.0% |
| GCAATTCGCATAGACGTTCT+AGG | - | chr3_1:84949631-84949650 | None:intergenic | 45.0% | |
| !!! | ACTTTTAAGGCATCCGGATC+CGG | + | chr3_1:84949687-84949706 | Msa0382430:CDS | 45.0% |
| TAAGCCGATCGTACGAGAAT+AGG | + | chr3_1:84949957-84949976 | Msa0382430:CDS | 45.0% | |
| TGACCTTTGCAACAGTTTCG+AGG | - | chr3_1:84949991-84950010 | None:intergenic | 45.0% | |
| TGCAAAGGTCAGATCATGTG+TGG | + | chr3_1:84950000-84950019 | Msa0382430:CDS | 45.0% | |
| ! | ATCCAAACCCATGATAGTGC+TGG | - | chr3_1:84950128-84950147 | None:intergenic | 45.0% |
| ! | CCCTGATTTTCAAATGGAGC+TGG | - | chr3_1:84950470-84950489 | None:intergenic | 45.0% |
| !! | TGATTTGCTTTCTCCACTCC+TGG | + | chr3_1:84950569-84950588 | Msa0382430:CDS | 45.0% |
| TTCTTAATGCTCTCCAGGAG+TGG | - | chr3_1:84950585-84950604 | None:intergenic | 45.0% | |
| ATCCAAACTAAAGCCCTGCT+TGG | + | chr3_1:84950787-84950806 | Msa0382430:CDS | 45.0% | |
| GTGCAAGCAGTGAGAACATT+GGG | + | chr3_1:84950809-84950828 | Msa0382430:CDS | 45.0% | |
| TAGCTTCCTTAGCTTCCTCT+TGG | - | chr3_1:84950877-84950896 | None:intergenic | 45.0% | |
| AGAGGAAGCTAAGGAAGCTA+AGG | + | chr3_1:84950877-84950896 | Msa0382430:CDS | 45.0% | |
| GGAAGCTAAGGCCATTAAAG+AGG | + | chr3_1:84950889-84950908 | Msa0382430:CDS | 45.0% | |
| CGATTGTGCAGCCTCTTTAA+TGG | - | chr3_1:84950903-84950922 | None:intergenic | 45.0% | |
| TCCAAGTCAGTCACAAACGA+TGG | + | chr3_1:84950953-84950972 | Msa0382430:CDS | 45.0% | |
| CCAAGTCAGTCACAAACGAT+GGG | + | chr3_1:84950954-84950973 | Msa0382430:CDS | 45.0% | |
| CAAGTCAGTCACAAACGATG+GGG | + | chr3_1:84950955-84950974 | Msa0382430:CDS | 45.0% | |
| ! | TTTTCTCCTGCTCTTCTTGG+TGG | - | chr3_1:84951053-84951072 | None:intergenic | 45.0% |
| ! | CTGAATGATTTTCGTCAGGG+AGG | - | chr3_1:84951252-84951271 | None:intergenic | 45.0% |
| AGATAACCCCTCAAATGTCG+AGG | + | chr3_1:84951297-84951316 | Msa0382430:CDS | 45.0% | |
| TCTGCAACCTCGACATTTGA+GGG | - | chr3_1:84951307-84951326 | None:intergenic | 45.0% | |
| AAACAAAGTGGGTCTGCTAG+TGG | + | chr3_1:84951454-84951473 | Msa0382430:CDS | 45.0% | |
| !! | ATGCTAAAAAGCACTCAGCC+AGG | + | chr3_1:84951482-84951501 | Msa0382430:CDS | 45.0% |
| ! | AAAGCACTCAGCCAGGAAAT+TGG | + | chr3_1:84951489-84951508 | Msa0382430:CDS | 45.0% |
| TTTCTTATCTACCAGCTGCC+TGG | - | chr3_1:84951545-84951564 | None:intergenic | 45.0% | |
| CTACCACGACAAATGGAAAG+AGG | + | chr3_1:84951771-84951790 | Msa0382430:CDS | 45.0% | |
| CTTCAAGTCTTACACCGACA+AGG | - | chr3_1:84952048-84952067 | None:intergenic | 45.0% | |
| !!! | ATTTTGGCTAACAAGGGTGC+AGG | + | chr3_1:84952141-84952160 | Msa0382430:intron | 45.0% |
| !! | TTTTGGCTAACAAGGGTGCA+GGG | + | chr3_1:84952142-84952161 | Msa0382430:intron | 45.0% |
| !! | GACTTCTAGAGTTTGCTTCC+TGG | + | chr3_1:84952369-84952388 | Msa0382430:intron | 45.0% |
| TGCAGTTTACAATACAGGCC+AGG | - | chr3_1:84952390-84952409 | None:intergenic | 45.0% | |
| CCCTCCCCTTCTATTCTTTA+TGG | + | chr3_1:84952793-84952812 | Msa0382430:intron | 45.0% | |
| AAACCACTGCTTGCTTGAGA+GGG | - | chr3_1:84953014-84953033 | None:intergenic | 45.0% | |
| AAAACCACTGCTTGCTTGAG+AGG | - | chr3_1:84953015-84953034 | None:intergenic | 45.0% | |
| ! | AGCTGATTCAGATGCAGATG+AGG | + | chr3_1:84953289-84953308 | Msa0382430:CDS | 45.0% |
| GATTCAGATGCAGATGAGGT+TGG | + | chr3_1:84953293-84953312 | Msa0382430:intron | 45.0% | |
| TCCGATGAACCAACTAAGCA+AGG | + | chr3_1:84953729-84953748 | Msa0382430:CDS | 45.0% | |
| ACAAACCTGGAAGAAAGACC+TGG | - | chr3_1:84953759-84953778 | None:intergenic | 45.0% | |
| TCTACTTGGATTTGTCGTGG+GGG | + | chr3_1:84953833-84953852 | Msa0382430:intron | 45.0% | |
| ! | ATTTGTAGTGGTGGAGCATC+AGG | + | chr3_1:84954306-84954325 | Msa0382430:intron | 45.0% |
| AAGGACAGCACTCCTATAAG+TGG | + | chr3_1:84954441-84954460 | Msa0382430:CDS | 45.0% | |
| TCTGCTACACAGACAATGAC+TGG | + | chr3_1:84954474-84954493 | Msa0382430:CDS | 45.0% | |
| CTTGGAACCACCAATGTTCT+TGG | - | chr3_1:84954505-84954524 | None:intergenic | 45.0% | |
| ACCTTCAGTCAAGTCTAAGC+AGG | + | chr3_1:84954563-84954582 | Msa0382430:CDS | 45.0% | |
| TCCTGCTTAGACTTGACTGA+AGG | - | chr3_1:84954567-84954586 | None:intergenic | 45.0% | |
| ! | ATCAGATGTTTCTGCAAGCG+AGG | + | chr3_1:84954743-84954762 | Msa0382430:CDS | 45.0% |
| ACATCAGGTGATGCCATGAA+GGG | + | chr3_1:84954789-84954808 | Msa0382430:CDS | 45.0% | |
| TCTAGATTCACCAGAGGACA+CGG | - | chr3_1:84954932-84954951 | None:intergenic | 45.0% | |
| !! | AACAGCTCTAGATTCACCAG+AGG | - | chr3_1:84954938-84954957 | None:intergenic | 45.0% |
| !!! | TTTTAAAAACAAATTATTTA+TGG | + | chr3_1:84951662-84951681 | Msa0382430:intron | 5.0% |
| GCTTGCAGATCCTCCTTCAT+CGG | + | chr3_1:84948985-84949004 | Msa0382430:CDS | 50.0% | |
| AGAAGCTCATCCACCGATGA+AGG | - | chr3_1:84949001-84949020 | None:intergenic | 50.0% | |
| GTGCATGCTTCAAGCCCAAA+TGG | + | chr3_1:84949418-84949437 | Msa0382430:intron | 50.0% | |
| GCAAGTGCAGCTTTCACATC+CGG | - | chr3_1:84949709-84949728 | None:intergenic | 50.0% | |
| AGACCATAAGGTGAGACCCT+AGG | + | chr3_1:84950080-84950099 | Msa0382430:intron | 50.0% | |
| GTCCAGCACTATCATGGGTT+TGG | + | chr3_1:84950123-84950142 | Msa0382430:intron | 50.0% | |
| ! | GCCGTTCACATGCTTTTACC+TGG | + | chr3_1:84950350-84950369 | Msa0382430:intron | 50.0% |
| ! | AGGAAGTTTTCCCGATTGCC+CGG | + | chr3_1:84950732-84950751 | Msa0382430:intron | 50.0% |
| TTTCCCGATTGCCCGGAAAT+TGG | + | chr3_1:84950739-84950758 | Msa0382430:CDS | 50.0% | |
| TTCCCGATTGCCCGGAAATT+GGG | + | chr3_1:84950740-84950759 | Msa0382430:CDS | 50.0% | |
| TCTCCCAATTTCCGGGCAAT+CGG | - | chr3_1:84950746-84950765 | None:intergenic | 50.0% | |
| ! | CACCAAGCAGGGCTTTAGTT+TGG | - | chr3_1:84950792-84950811 | None:intergenic | 50.0% |
| GGTGCAAGCAGTGAGAACAT+TGG | + | chr3_1:84950808-84950827 | Msa0382430:CDS | 50.0% | |
| CCCATCGTTTGTGACTGACT+TGG | - | chr3_1:84950957-84950976 | None:intergenic | 50.0% | |
| ! | CTCTTCTTGGTGGCTTCTTC+TGG | - | chr3_1:84951043-84951062 | None:intergenic | 50.0% |
| AAGAAGCCACCAAGAAGAGC+AGG | + | chr3_1:84951044-84951063 | Msa0382430:CDS | 50.0% | |
| ! | CGGTTTTCTCCTGCTCTTCT+TGG | - | chr3_1:84951056-84951075 | None:intergenic | 50.0% |
| CTGCAACCTCGACATTTGAG+GGG | - | chr3_1:84951306-84951325 | None:intergenic | 50.0% | |
| CTCTGCAACCTCGACATTTG+AGG | - | chr3_1:84951308-84951327 | None:intergenic | 50.0% | |
| CTCAAATGTCGAGGTTGCAG+AGG | + | chr3_1:84951306-84951325 | Msa0382430:CDS | 50.0% | |
| ! | TTTCTCACTGGCTGCTTGAC+AGG | - | chr3_1:84951379-84951398 | None:intergenic | 50.0% |
| TGTCAAGCAGCCAGTGAGAA+AGG | + | chr3_1:84951378-84951397 | Msa0382430:CDS | 50.0% | |
| TGACCAAGCACCTTTCTCAC+TGG | - | chr3_1:84951391-84951410 | None:intergenic | 50.0% | |
| ! | AAGGTGCTTGGTCAGAACTC+AGG | + | chr3_1:84951397-84951416 | Msa0382430:CDS | 50.0% |
| ! | TTGGATGATAACGAGGGTGG+TGG | + | chr3_1:84951508-84951527 | Msa0382430:CDS | 50.0% |
| AGATAAGAAAAAGCGGGGGC+AGG | + | chr3_1:84951555-84951574 | Msa0382430:CDS | 50.0% | |
| GAGGAGACTACCACGACAAA+TGG | + | chr3_1:84951764-84951783 | Msa0382430:CDS | 50.0% | |
| TGGAAAGAGGAAACACGCCT+CGG | + | chr3_1:84951784-84951803 | Msa0382430:CDS | 50.0% | |
| ACTTGAAGTATGGTGGCCGA+AGG | + | chr3_1:84952060-84952079 | Msa0382430:CDS | 50.0% | |
| AACCACTGCTTGCTTGAGAG+GGG | - | chr3_1:84953013-84953032 | None:intergenic | 50.0% | |
| TGATCCTATTCAGGCCTGCA+AGG | + | chr3_1:84953688-84953707 | Msa0382430:intron | 50.0% | |
| TCTTCCTTGCAGGCCTGAAT+AGG | - | chr3_1:84953695-84953714 | None:intergenic | 50.0% | |
| CCTGGCATTCCTTGCTTAGT+TGG | - | chr3_1:84953741-84953760 | None:intergenic | 50.0% | |
| CCAACTAAGCAAGGAATGCC+AGG | + | chr3_1:84953738-84953757 | Msa0382430:CDS | 50.0% | |
| GAATGCCAGGTCTTTCTTCC+AGG | + | chr3_1:84953751-84953770 | Msa0382430:CDS | 50.0% | |
| ATTTGTCGTGGGGGAGCAAT+TGG | + | chr3_1:84953842-84953861 | Msa0382430:intron | 50.0% | |
| TTTGTCGTGGGGGAGCAATT+GGG | + | chr3_1:84953843-84953862 | Msa0382430:intron | 50.0% | |
| CCACCACTACAAATCGAAGG+AGG | - | chr3_1:84954300-84954319 | None:intergenic | 50.0% | |
| ! | CCTCCTTCGATTTGTAGTGG+TGG | + | chr3_1:84954297-84954316 | Msa0382430:intron | 50.0% |
| GCTCCACCACTACAAATCGA+AGG | - | chr3_1:84954303-84954322 | None:intergenic | 50.0% | |
| TTTGGTCAGAAGTCTACGGG+TGG | + | chr3_1:84954357-84954376 | Msa0382430:CDS | 50.0% | |
| AAGCAGGAAACCCCAAAGAG+TGG | + | chr3_1:84954579-84954598 | Msa0382430:CDS | 50.0% | |
| CTCAGAAGCAGCAGTCTTTG+GGG | - | chr3_1:84954622-84954641 | None:intergenic | 50.0% | |
| CCTCAGAAGCAGCAGTCTTT+GGG | - | chr3_1:84954623-84954642 | None:intergenic | 50.0% | |
| ! | CCAAAGACTGCTGCTTCTGA+GGG | + | chr3_1:84954621-84954640 | Msa0382430:CDS | 50.0% |
| GAAAAGTCCACTGTCGACAG+TGG | + | chr3_1:84954663-84954682 | Msa0382430:CDS | 50.0% | |
| ! | AGATGTTTCTGCAAGCGAGG+AGG | + | chr3_1:84954746-84954765 | Msa0382430:CDS | 50.0% |
| GACATCAGGTGATGCCATGA+AGG | + | chr3_1:84954788-84954807 | Msa0382430:CDS | 50.0% | |
| CTGACGCTTCTTTCCCTTCA+TGG | - | chr3_1:84954805-84954824 | None:intergenic | 50.0% | |
| ! | GAAGCGTCAGAGAAGCTAGA+AGG | + | chr3_1:84954815-84954834 | Msa0382430:exon | 50.0% |
| CTAGATTCACCAGAGGACAC+GGG | - | chr3_1:84954931-84954950 | None:intergenic | 50.0% | |
| TGCAGATCCTCCTTCATCGG+TGG | + | chr3_1:84948988-84949007 | Msa0382430:CDS | 55.0% | |
| AGCTCATCCACCGATGAAGG+AGG | - | chr3_1:84948998-84949017 | None:intergenic | 55.0% | |
| GCAGCTTTCACATCCGGATC+CGG | - | chr3_1:84949703-84949722 | None:intergenic | 55.0% | |
| GCTCCTAGGGTCTCACCTTA+TGG | - | chr3_1:84950086-84950105 | None:intergenic | 55.0% | |
| GGGCAATCGGGAAAACTTCC+TGG | - | chr3_1:84950733-84950752 | None:intergenic | 55.0% | |
| CTCCCAATTTCCGGGCAATC+GGG | - | chr3_1:84950745-84950764 | None:intergenic | 55.0% | |
| TTGCCCGGAAATTGGGAGAG+AGG | + | chr3_1:84950747-84950766 | Msa0382430:CDS | 55.0% | |
| TGCCCGGAAATTGGGAGAGA+GGG | + | chr3_1:84950748-84950767 | Msa0382430:CDS | 55.0% | |
| GACCCTCTCTCCCAATTTCC+GGG | - | chr3_1:84950753-84950772 | None:intergenic | 55.0% | |
| GGACCCTCTCTCCCAATTTC+CGG | - | chr3_1:84950754-84950773 | None:intergenic | 55.0% | |
| GTTTGGATCCGCAGCTTTCG+AGG | - | chr3_1:84950775-84950794 | None:intergenic | 55.0% | |
| CTCACTGCTTGCACCAAGCA+GGG | - | chr3_1:84950803-84950822 | None:intergenic | 55.0% | |
| TCTCACTGCTTGCACCAAGC+AGG | - | chr3_1:84950804-84950823 | None:intergenic | 55.0% | |
| TGCACGCGTTGGAGAAGATG+AGG | + | chr3_1:84950979-84950998 | Msa0382430:CDS | 55.0% | |
| AGTTCCGAGTTCCTCACACG+AGG | + | chr3_1:84951141-84951160 | Msa0382430:CDS | 55.0% | |
| TGGTCCTCGTGTGAGGAACT+CGG | - | chr3_1:84951148-84951167 | None:intergenic | 55.0% | |
| AACTTCCTGGTCCTCGTGTG+AGG | - | chr3_1:84951155-84951174 | None:intergenic | 55.0% | |
| ! | CACTGGCTGCTTGACAGGTT+TGG | - | chr3_1:84951374-84951393 | None:intergenic | 55.0% |
| !! | CAGCCAGTGAGAAAGGTGCT+TGG | + | chr3_1:84951385-84951404 | Msa0382430:CDS | 55.0% |
| ! | GATGATAACGAGGGTGGTGG+TGG | + | chr3_1:84951511-84951530 | Msa0382430:CDS | 55.0% |
| ATCTACCAGCTGCCTGGAAG+AGG | - | chr3_1:84951539-84951558 | None:intergenic | 55.0% | |
| TAAGAAAAAGCGGGGGCAGG+AGG | + | chr3_1:84951558-84951577 | Msa0382430:CDS | 55.0% | |
| GGAAAGAGGAAACACGCCTC+GGG | + | chr3_1:84951785-84951804 | Msa0382430:CDS | 55.0% | |
| ! | AGAATAGAAGGGGAGGGTGC+AGG | - | chr3_1:84952790-84952809 | None:intergenic | 55.0% |
| GGGGAACAACAATAGAGCCC+AGG | - | chr3_1:84952993-84953012 | None:intergenic | 55.0% | |
| ACCACTGCTTGCTTGAGAGG+GGG | - | chr3_1:84953012-84953031 | None:intergenic | 55.0% | |
| ! | CCCAAAGACTGCTGCTTCTG+AGG | + | chr3_1:84954620-84954639 | Msa0382430:CDS | 55.0% |
| CCCTCAGAAGCAGCAGTCTT+TGG | - | chr3_1:84954624-84954643 | None:intergenic | 55.0% | |
| GAGGGAAAGCCCCCAAAAAG+TGG | + | chr3_1:84954639-84954658 | Msa0382430:CDS | 55.0% | |
| AAGTCCACTGTCGACAGTGG+TGG | + | chr3_1:84954666-84954685 | Msa0382430:CDS | 55.0% | |
| ACTGTCGACAGTGGTGGCAA+GGG | + | chr3_1:84954672-84954691 | Msa0382430:CDS | 55.0% | |
| TCAAGTCGCTGCAGTGCCCA+GGG | - | chr3_1:84949580-84949599 | None:intergenic | 60.0% | |
| GAGAGGGTCCTCGAAAGCTG+CGG | + | chr3_1:84950764-84950783 | Msa0382430:CDS | 60.0% | |
| AACGATGGGGTTGCACGCGT+TGG | + | chr3_1:84950968-84950987 | Msa0382430:CDS | 60.0% | |
| GAGTTCCTCACACGAGGACC+AGG | + | chr3_1:84951147-84951166 | Msa0382430:CDS | 60.0% | |
| GGGAGGCTGTCACTAGGTGA+AGG | - | chr3_1:84951235-84951254 | None:intergenic | 60.0% | |
| TCGTCAGGGAGGCTGTCACT+AGG | - | chr3_1:84951241-84951260 | None:intergenic | 60.0% | |
| !! | GTGGTGGTGGATCCTCTTCC+AGG | + | chr3_1:84951524-84951543 | Msa0382430:CDS | 60.0% |
| TGGATCCTCTTCCAGGCAGC+TGG | + | chr3_1:84951531-84951550 | Msa0382430:CDS | 60.0% | |
| TCCCCCTCTCAAGCAAGCAG+TGG | + | chr3_1:84953008-84953027 | Msa0382430:intron | 60.0% | |
| CTTGCCACCACTGTCGACAG+TGG | - | chr3_1:84954673-84954692 | None:intergenic | 60.0% | |
| CACTGTCGACAGTGGTGGCA+AGG | + | chr3_1:84954671-84954690 | Msa0382430:CDS | 60.0% | |
| CTGTCGACAGTGGTGGCAAG+GGG | + | chr3_1:84954673-84954692 | Msa0382430:CDS | 60.0% | |
| CTCAAGTCGCTGCAGTGCCC+AGG | - | chr3_1:84949581-84949600 | None:intergenic | 65.0% | |
| TTTCCCTGGCCCGTGTCCTC+TGG | + | chr3_1:84954919-84954938 | Msa0382430:three_prime_UTR | 65.0% | |
| TCACCAGAGGACACGGGCCA+GGG | - | chr3_1:84954925-84954944 | None:intergenic | 65.0% | |
| TTCACCAGAGGACACGGGCC+AGG | - | chr3_1:84954926-84954945 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 84948600 | 84955209 | 84948600 | ID=Msa0382430;Name=Msa0382430 |
| chr3_1 | mRNA | 84948600 | 84955209 | 84948600 | ID=Msa0382430-mRNA-1;Parent=Msa0382430;Name=Msa0382430-mRNA-1;_AED=0.07;_eAED=0.07;_QI=332|1|1|1|1|1|12|376|805 |
| chr3_1 | exon | 84948600 | 84949033 | 84948600 | ID=Msa0382430-mRNA-1:exon:22207;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84949592 | 84949795 | 84949592 | ID=Msa0382430-mRNA-1:exon:22208;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84949908 | 84950089 | 84949908 | ID=Msa0382430-mRNA-1:exon:22209;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84950488 | 84950614 | 84950488 | ID=Msa0382430-mRNA-1:exon:22210;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84950734 | 84951579 | 84950734 | ID=Msa0382430-mRNA-1:exon:22211;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84951710 | 84951817 | 84951710 | ID=Msa0382430-mRNA-1:exon:22212;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84952016 | 84952089 | 84952016 | ID=Msa0382430-mRNA-1:exon:22213;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84952709 | 84952760 | 84952709 | ID=Msa0382430-mRNA-1:exon:22214;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84953224 | 84953310 | 84953224 | ID=Msa0382430-mRNA-1:exon:22215;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84953383 | 84953426 | 84953383 | ID=Msa0382430-mRNA-1:exon:22216;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84953701 | 84953772 | 84953701 | ID=Msa0382430-mRNA-1:exon:22217;Parent=Msa0382430-mRNA-1 |
| chr3_1 | exon | 84954314 | 84955209 | 84954314 | ID=Msa0382430-mRNA-1:exon:22218;Parent=Msa0382430-mRNA-1 |
| chr3_1 | five_prime_UTR | 84948600 | 84948931 | 84948600 | ID=Msa0382430-mRNA-1:five_prime_utr;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84948932 | 84949033 | 84948932 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84949592 | 84949795 | 84949592 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84949908 | 84950089 | 84949908 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84950488 | 84950614 | 84950488 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84950734 | 84951579 | 84950734 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84951710 | 84951817 | 84951710 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84952016 | 84952089 | 84952016 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84952709 | 84952760 | 84952709 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84953224 | 84953310 | 84953224 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84953383 | 84953426 | 84953383 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84953701 | 84953772 | 84953701 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | CDS | 84954314 | 84954833 | 84954314 | ID=Msa0382430-mRNA-1:cds;Parent=Msa0382430-mRNA-1 |
| chr3_1 | three_prime_UTR | 84954834 | 84955209 | 84954834 | ID=Msa0382430-mRNA-1:three_prime_utr;Parent=Msa0382430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
