AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0221470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0221470 MtrunA17_Chr2g0325841 95.393 738 19 3 321 1044 454 1190 0.0 1470
Msa0221470 MtrunA17_Chr2g0325841 85.405 370 27 1 1 343 1 370 2.27e-176 550
Msa0221470 MtrunA17_Chr4g0010671 51.828 465 205 9 352 810 1 452 4.15e-144 446
Msa0221470 MtrunA17_Chr4g0010671 51.220 82 34 3 591 672 437 512 3.55e-12 70.5
Msa0221470 MtrunA17_Chr1g0153901 42.455 391 186 10 365 719 12 399 5.96e-72 249
Msa0221470 MtrunA17_Chr1g0153901 36.875 160 92 4 804 954 380 539 6.82e-24 107
Msa0221470 MtrunA17_Chr6g0469071 41.795 390 189 9 365 719 12 398 1.07e-69 245
Msa0221470 MtrunA17_Chr6g0469071 34.800 250 136 6 804 1044 379 610 1.58e-38 153
Msa0221470 MtrunA17_Chr4g0041151 38.292 363 124 13 15 351 8 296 3.10e-41 154
Msa0221470 MtrunA17_Chr5g0434431 40.237 169 96 3 880 1044 1 168 8.82e-36 134
Msa0221470 MtrunA17_Chr2g0283871 36.778 329 164 10 34 350 11 307 9.69e-34 132
Msa0221470 MtrunA17_Chr6g0466851 23.922 464 287 20 359 799 22 442 8.01e-19 92.4
Msa0221470 MtrunA17_Chr1g0174011 35.165 91 58 1 954 1044 1 90 6.02e-14 68.9
Msa0221470 MtrunA17_Chr1g0153911 37.349 83 51 1 962 1044 1 82 3.32e-13 66.6
Msa0221470 MtrunA17_Chr2g0287771 37.374 99 57 3 837 930 7 105 5.44e-13 66.6
Msa0221470 MtrunA17_Chr6g0453701 62.500 40 15 0 1005 1044 1 40 2.61e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0221470 AT3G58630.2 44.628 121 56 3 32 142 13 132 8.42e-22 98.2
Msa0221470 AT3G58630.1 44.628 121 56 3 32 142 13 132 1.26e-21 97.8
Msa0221470 AT3G14180.1 26.686 341 190 11 36 334 74 396 2.83e-19 92.8
Msa0221470 AT3G11100.1 43.939 132 59 5 43 172 19 137 1.93e-14 75.1
Msa0221470 AT5G05550.1 38.333 120 63 3 19 138 2 110 3.32e-11 65.5
Msa0221470 AT5G05550.3 38.333 120 63 3 19 138 2 110 3.68e-11 65.1
Msa0221470 AT5G05550.2 38.333 120 63 3 19 138 2 110 4.09e-11 65.1
Msa0221470 AT1G54060.1 40.625 96 54 2 43 138 91 183 5.60e-11 66.2

Find 264 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAATTCATTCAGATATT+TGG 0.056238 2_1:-70074181 Msa0221470:intron
GACAAAGTTCAAGAGTTATT+TGG 0.142341 2_1:-70076769 Msa0221470:CDS
GCGACTGGACCCTGCCTTTC+AGG 0.156060 2_1:-70076386 Msa0221470:intron
GGAAGAAAGGATAGGGAATT+AGG 0.194276 2_1:-70079321 Msa0221470:CDS
GATATATACATGGGGATCTT+AGG 0.202919 2_1:-70076474 Msa0221470:CDS
GGAAGAAGGGATGTGGAATT+AGG 0.206226 2_1:-70079360 Msa0221470:CDS
ACAAGGACGTAAAGATATTT+TGG 0.221355 2_1:-70075916 Msa0221470:CDS
TAGTTGAGGGTTTGACCTTT+TGG 0.228086 2_1:+70075224 None:intergenic
AATACTACATTATTCTTCTT+AGG 0.228253 2_1:+70074675 None:intergenic
ATATGGGATGTTCCTAATTC+TGG 0.229524 2_1:-70076568 Msa0221470:CDS
GTTGTGTAATATAGAAAATA+TGG 0.260176 2_1:-70076585 Msa0221470:intron
GATGTTCAAATGGAAGTTTC+AGG 0.262847 2_1:-70073083 Msa0221470:intron
TTCCTCATCAAGAAAATTAT+AGG 0.264005 2_1:+70076432 None:intergenic
TTTCGTAAGAAGCCAGAATT+AGG 0.274071 2_1:+70076556 None:intergenic
CGAATGTGAAGGATGAAATT+TGG 0.275808 2_1:-70076689 Msa0221470:CDS
TGTACTTACTTATTGTAATA+AGG 0.278754 2_1:+70074802 None:intergenic
ATATTTGCGGTTATGCGTTT+TGG 0.282977 2_1:+70079992 None:intergenic
CGGTGTGAATTCGTTTCATC+TGG 0.292027 2_1:+70080180 None:intergenic
GCTCTCACAGAGAGATATTA+TGG 0.299040 2_1:-70075112 Msa0221470:CDS
GAAGACTCACTTTGAGTTGT+TGG 0.306920 2_1:+70078756 None:intergenic
ACAAAGTTCAAGAGTTATTT+GGG 0.315689 2_1:-70076768 Msa0221470:CDS
GAGAAACTTGATTCCGTACT+TGG 0.322643 2_1:-70079786 Msa0221470:CDS
TTAAGATCACTTGGTGTTGC+TGG 0.331385 2_1:+70072849 None:intergenic
CAATCAACTGGGAAATCAAT+AGG 0.331616 2_1:-70076801 Msa0221470:CDS
AGTCTTGATTGTATTCAATT+TGG 0.332806 2_1:+70072877 None:intergenic
ATTGAATTTGATCAATCAAC+TGG 0.335377 2_1:-70076813 Msa0221470:CDS
AAAACAAAAGCAAGATTCAT+TGG 0.336900 2_1:-70076179 Msa0221470:CDS
CACATAGTTGATTCATGTAT+AGG 0.338523 2_1:-70072819 Msa0221470:CDS
ATGATAGAATGAAGTCTCTT+TGG 0.348872 2_1:-70075134 Msa0221470:CDS
TCTCTTGCATTATCTTCTCT+TGG 0.351555 2_1:+70076206 None:intergenic
ACATACAATTCACATCGTTC+TGG 0.352659 2_1:+70075585 None:intergenic
TGAACCGACGTTGGATGTTC+CGG 0.357032 2_1:-70079727 Msa0221470:CDS
CTCGCAGGTACAACGGTATT+AGG 0.358068 2_1:+70075660 None:intergenic
CTGATGGGATTATTGATTCA+TGG 0.372249 2_1:-70074281 Msa0221470:CDS
TATGGCAATATTTACAAGTT+GGG 0.375860 2_1:-70075537 Msa0221470:CDS
GAAGAAAGGATAGGGAATTA+GGG 0.376460 2_1:-70079320 Msa0221470:CDS
AATCAACTGGGAAATCAATA+GGG 0.376514 2_1:-70076800 Msa0221470:CDS
CTGGCTTCTTACGAAAGAAA+TGG 0.376567 2_1:-70076549 Msa0221470:CDS
AGAGGAATTGATGCAGGATC+TGG 0.380173 2_1:-70075730 Msa0221470:CDS
ACATAGTTGATTCATGTATA+GGG 0.381069 2_1:-70072818 Msa0221470:CDS
TCAAATGTTTAGGATGTTGA+TGG 0.382640 2_1:-70075270 Msa0221470:intron
ATATATACATGGGGATCTTA+GGG 0.384969 2_1:-70076473 Msa0221470:CDS
ACTAGATTCTGTTCAACAAT+TGG 0.391789 2_1:-70075205 Msa0221470:CDS
TTCTTCAATGTAGTCGTCAT+TGG 0.391932 2_1:-70074716 Msa0221470:intron
TGAAGTGGAGGTTGATAATT+CGG 0.393670 2_1:-70079472 Msa0221470:CDS
GAAGAAGGGATGTGGAATTA+GGG 0.397302 2_1:-70079359 Msa0221470:CDS
TGTGGAGATTGTTTCTGATA+AGG 0.398799 2_1:-70075361 Msa0221470:intron
CGGTATTAGGAGAGTGGGTT+GGG 0.399694 2_1:+70075673 None:intergenic
ACTGAGAATCTAACCTGCTT+CGG 0.401096 2_1:+70076913 None:intergenic
ATTTCATCCTCCTCTGGTAT+AGG 0.406243 2_1:+70075609 None:intergenic
CCACAATCGTAGAATAGTTA+TGG 0.407588 2_1:+70075062 None:intergenic
GTGGGTAAGAGTGACTTATA+TGG 0.409433 2_1:-70074928 Msa0221470:CDS
AGATATTATGGAGTTGTGTA+TGG 0.410122 2_1:-70075100 Msa0221470:CDS
ACATCCAACGTCGGTTCAAC+CGG 0.412214 2_1:+70079732 None:intergenic
GCAAGATTCATTGGGTGATT+CGG 0.412865 2_1:-70076170 Msa0221470:CDS
CTGAGAATCTAACCTGCTTC+GGG 0.418457 2_1:+70076914 None:intergenic
TTCTAGTATCTGATTATGTA+TGG 0.423796 2_1:+70075509 None:intergenic
GGATGTTCCGGCATGGGCGC+TGG 0.424236 2_1:-70079715 Msa0221470:CDS
TCAGATACTAGAAAATGATA+TGG 0.425143 2_1:-70075499 Msa0221470:CDS
TGCTGCTGCAGCAGCTGAAG+TGG 0.426573 2_1:-70079487 Msa0221470:CDS
TTTCTTCATGCAGTGGCCTA+TGG 0.431013 2_1:-70075555 Msa0221470:CDS
TCCGGCATGGGCGCTGGCAC+CGG 0.433517 2_1:-70079709 Msa0221470:CDS
AAGAGTTATTTGGGTTTCCT+TGG 0.435068 2_1:-70076759 Msa0221470:CDS
CATATGTGGGCGAGCGTTGG+AGG 0.440328 2_1:-70076522 Msa0221470:CDS
TTAATACTATCATAGAGCTT+TGG 0.441420 2_1:-70074524 Msa0221470:intron
TTCCATTGCTCATGGCGTGC+TGG 0.442853 2_1:+70076127 None:intergenic
AGAAGAGGAAGAGAGGAAGA+AGG 0.443244 2_1:-70079374 Msa0221470:CDS
CCATTGAATAAAATTGTTGA+GGG 0.448770 2_1:+70075395 None:intergenic
CATACAATTCACATCGTTCT+GGG 0.449635 2_1:+70075586 None:intergenic
ATGTAGGCCTCAGCATTACT+TGG 0.450422 2_1:+70074868 None:intergenic
TCAAACTTGCACAACGTTGT+CGG 0.451015 2_1:+70074119 None:intergenic
GAAGAGAGGAAGAAGGGATG+TGG 0.452716 2_1:-70079367 Msa0221470:CDS
AAAGAAATGGATTGCATATG+TGG 0.454826 2_1:-70076536 Msa0221470:CDS
ATCCTTCACATTCGCATCTA+CGG 0.455050 2_1:+70076698 None:intergenic
GAAGAGGAAGAGAGGAAGAA+GGG 0.456890 2_1:-70079373 Msa0221470:CDS
TGAAATTTGGACAGAGATCC+TGG 0.457732 2_1:-70076676 Msa0221470:intron
GGTTGCAGGAAGAAAGGATA+GGG 0.458795 2_1:-70079328 Msa0221470:CDS
GTGGGTATTAAGCAATACTT+TGG 0.461383 2_1:-70075837 Msa0221470:CDS
CAGAGAGGTTGCAGGAAGAA+AGG 0.462444 2_1:-70079334 Msa0221470:CDS
GTGACGAACTTCATGATTTG+TGG 0.464872 2_1:+70080110 None:intergenic
AAACAAAAGCAAGATTCATT+GGG 0.466563 2_1:-70076178 Msa0221470:CDS
GTCGTCGGAGAGTGCGGAGG+AGG 0.466703 2_1:-70079631 Msa0221470:CDS
GACGTTGGATGTTCCGGCAT+GGG 0.467000 2_1:-70079721 Msa0221470:CDS
TGAGGTGGAAACGGTTGGGC+AGG 0.472912 2_1:-70075418 Msa0221470:CDS
AATATTTGCGTCAGTATCAC+TGG 0.473392 2_1:-70079974 Msa0221470:CDS
TTAGGGCACAGAGAGGTTGC+AGG 0.475736 2_1:-70079342 Msa0221470:CDS
GTTGAACAGAATCTAGTTGA+GGG 0.476248 2_1:+70075211 None:intergenic
TCTGGGATTTCATCCTCCTC+TGG 0.476626 2_1:+70075603 None:intergenic
TATCAGCTCCTTCCCGAAGC+AGG 0.483935 2_1:-70076926 Msa0221470:CDS
GATGCAGGATCTGGAAGCTA+TGG 0.484325 2_1:-70075721 Msa0221470:CDS
GTTCAAGTAACCTGAAAGGC+AGG 0.485139 2_1:+70076376 None:intergenic
TAATTCGGATTCCGATCATT+CGG 0.485953 2_1:-70079457 Msa0221470:CDS
TCATTCGGATTCCGATGATT+CGG 0.488433 2_1:-70079442 Msa0221470:CDS
GCTTTCTTTCCAGCGAACAT+AGG 0.488543 2_1:+70074652 None:intergenic
GTAACCGTGATGGTCATTGA+TGG 0.488801 2_1:+70079935 None:intergenic
GTTGTACCTGCGAGCACAAA+GGG 0.489013 2_1:-70075651 Msa0221470:CDS
AAAGAAAGCTCAAATGAGTT+CGG 0.490228 2_1:-70076278 Msa0221470:CDS
GATACTGACGCAAATATTTG+CGG 0.490239 2_1:+70079979 None:intergenic
TAGTAATACTGATGTTCAAA+TGG 0.490295 2_1:-70073093 Msa0221470:CDS
GCACCGGTAGGTCGTCGATC+TGG 0.491219 2_1:-70079693 Msa0221470:CDS
GTTGATTGATCAAATTCAAT+CGG 0.494512 2_1:+70076816 None:intergenic
AAGACAATGTTTCACCCAAA+AGG 0.496909 2_1:-70075239 Msa0221470:CDS
CATTCACACTCATCGATGCA+TGG 0.498820 2_1:-70080025 Msa0221470:CDS
GATTATTGATTCATGGAAGA+AGG 0.498842 2_1:-70074274 Msa0221470:intron
CCATAACTATTCTACGATTG+TGG 0.504284 2_1:-70075062 Msa0221470:CDS
CTGATGAGGTGGAAACGGTT+GGG 0.506355 2_1:-70075422 Msa0221470:CDS
AGAATCTATAAAGCTTGAGT+TGG 0.506939 2_1:-70075160 Msa0221470:CDS
TGTAGTATTCCTATGTTCGC+TGG 0.508486 2_1:-70074661 Msa0221470:CDS
AGAGCCCGACAAAAGCCATC+AGG 0.510661 2_1:-70076103 Msa0221470:CDS
GCCATTGAATAAAATTGTTG+AGG 0.511961 2_1:+70075394 None:intergenic
CTTGATTCCGTACTTGGAGA+TGG 0.512696 2_1:-70079780 Msa0221470:CDS
CTATGGCAATATTTACAAGT+TGG 0.513210 2_1:-70075538 Msa0221470:CDS
AGATGGTTCACCGGCGAAGA+AGG 0.514224 2_1:-70079763 Msa0221470:CDS
GGGCTCTCTTCCATTGCTCA+TGG 0.515667 2_1:+70076119 None:intergenic
ACTGATGAGGTGGAAACGGT+TGG 0.516247 2_1:-70075423 Msa0221470:CDS
TCATGGCGTGCTGGTGGAGA+TGG 0.517032 2_1:+70076136 None:intergenic
ACATCGTCTCCGGAGAGCGC+GGG 0.521301 2_1:-70079552 Msa0221470:CDS
TAGAGAGGTTACACATGCTA+TGG 0.522899 2_1:-70079295 Msa0221470:CDS
GAGAGTAAGAAGAGGAAGAG+AGG 0.523249 2_1:-70079381 Msa0221470:CDS
TTTGTTCGTGGTGTTGGTCG+AGG 0.524167 2_1:-70075861 Msa0221470:CDS
TCATCCTCATCGAATGGCTC+AGG 0.524224 2_1:+70074154 None:intergenic
CGTGACAGCGACATCGTCTC+CGG 0.524855 2_1:-70079562 Msa0221470:CDS
CGTGGTGTTGGTCGAGGTGT+GGG 0.525314 2_1:-70075855 Msa0221470:CDS
AGACGGAGATGGTTGAGCTT+CGG 0.525525 2_1:+70080088 None:intergenic
ACCGGTGCCAGCGCCCATGC+CGG 0.526811 2_1:+70079708 None:intergenic
CCCCTCACAGATTGTCTCGT+GGG 0.526889 2_1:-70076243 Msa0221470:CDS
GCTTACTCAGCAAATTAAAG+AGG 0.528481 2_1:-70075748 Msa0221470:CDS
TAGCCGCACTCATAACTCTC+AGG 0.529134 2_1:+70074336 None:intergenic
GAATCGCCTCTCAATTAATG+TGG 0.531144 2_1:-70074947 Msa0221470:CDS
ACAATTGAAGACCATAAAAG+TGG 0.531744 2_1:-70075772 Msa0221470:CDS
TGCTGCAGCAGCTGAAGTGG+AGG 0.532586 2_1:-70079484 Msa0221470:CDS
AGGTTGCAGGAAGAAAGGAT+AGG 0.533064 2_1:-70079329 Msa0221470:CDS
ATTCACACTCATCGATGCAT+GGG 0.533565 2_1:-70080024 Msa0221470:CDS
TCAAGTACGGCGGATGAAGA+CGG 0.534701 2_1:+70080071 None:intergenic
CATTGCTCATGGCGTGCTGG+TGG 0.536323 2_1:+70076130 None:intergenic
GAGTGGGTTGGGAAATTCGA+GGG 0.537747 2_1:+70075684 None:intergenic
ATGCAGGATCTGGAAGCTAT+GGG 0.538205 2_1:-70075720 Msa0221470:CDS
CACCAGCACGCCATGAGCAA+TGG 0.538655 2_1:-70076129 Msa0221470:CDS
TTGCATATGTGGGCGAGCGT+TGG 0.540260 2_1:-70076525 Msa0221470:CDS
CATCGTCTCCGGAGAGCGCG+GGG 0.541649 2_1:-70079551 Msa0221470:CDS
GCCCACTGATGAGGTGGAAA+CGG 0.543518 2_1:-70075427 Msa0221470:CDS
GGCGAAGAAGGTCTCGCCGC+CGG 0.543717 2_1:-70079751 Msa0221470:CDS
CGACGTTGGATGTTCCGGCA+TGG 0.545666 2_1:-70079722 Msa0221470:CDS
GAACTACCCTTTGTGCTCGC+AGG 0.546113 2_1:+70075645 None:intergenic
TAGGGAATTAGGGTATAGAG+AGG 0.548147 2_1:-70079310 Msa0221470:CDS
TACTATCATAGAGCTTTGGA+TGG 0.549154 2_1:-70074520 Msa0221470:intron
TTGTGTAATATAGAAAATAT+GGG 0.550940 2_1:-70076584 Msa0221470:intron
AATTAAAGAGGAATTGATGC+AGG 0.552547 2_1:-70075736 Msa0221470:CDS
AGTATCTGATTATGTATGGT+AGG 0.552558 2_1:+70075513 None:intergenic
ACGGTATTAGGAGAGTGGGT+TGG 0.553692 2_1:+70075672 None:intergenic
TTAGCACTTGACCGTACTGA+TGG 0.556532 2_1:-70076849 Msa0221470:CDS
ATGTTGAAAATTGTATCTGA+TGG 0.556750 2_1:-70074297 Msa0221470:CDS
ATGGCAATATTTACAAGTTG+GGG 0.558612 2_1:-70075536 Msa0221470:CDS
TCATCCTCCTCTGGTATAGG+AGG 0.558689 2_1:+70075612 None:intergenic
AAAATATCTTTACGTCCTTG+TGG 0.558947 2_1:+70075918 None:intergenic
GGACCAACCGTCTTCAAGTA+CGG 0.559818 2_1:+70080058 None:intergenic
GATATTATGGAGTTGTGTAT+GGG 0.560819 2_1:-70075099 Msa0221470:CDS
TCTGATGTGTAATCTCCTGA+TGG 0.561489 2_1:+70076088 None:intergenic
ATATGTGGGCGAGCGTTGGA+GGG 0.562303 2_1:-70076521 Msa0221470:CDS
AACCGTTTCCACCTCATCAG+TGG 0.562524 2_1:+70075425 None:intergenic
GACATCGTCTCCGGAGAGCG+CGG 0.562955 2_1:-70079553 Msa0221470:CDS
CGAACAAAACCAGAGTGCTC+AGG 0.564100 2_1:+70075876 None:intergenic
GTTTCTGAGATGATACATTC+CGG 0.564710 2_1:+70079595 None:intergenic
TCGTGGTGTTGGTCGAGGTG+TGG 0.566638 2_1:-70075856 Msa0221470:CDS
AGCGTTTGTTCAGATGCGAC+TGG 0.567532 2_1:-70076401 Msa0221470:CDS
TTGACTTCTAGATATATACA+TGG 0.567563 2_1:-70076484 Msa0221470:CDS
TATAGATGTCGTTGCTGAGA+AGG 0.569304 2_1:-70072970 Msa0221470:intron
ATAAGTTCATCCTCATCGAA+TGG 0.570256 2_1:+70074148 None:intergenic
TGTTGAACAGAATCTAGTTG+AGG 0.570297 2_1:+70075210 None:intergenic
GTAATTGAAATCCGAATCAT+CGG 0.570429 2_1:+70079431 None:intergenic
ATTGGCAAACCTGAGCACTC+TGG 0.570492 2_1:-70075885 Msa0221470:CDS
TGACTTCTAGATATATACAT+GGG 0.570770 2_1:-70076483 Msa0221470:CDS
CGGTGAACCATCTCCAAGTA+CGG 0.570836 2_1:+70079773 None:intergenic
AGAGTGGGTTGGGAAATTCG+AGG 0.573993 2_1:+70075683 None:intergenic
ACTTATTGTAATAAGGTGCT+AGG 0.575296 2_1:+70074809 None:intergenic
ACGGCGGATGAAGACGGAGA+TGG 0.575810 2_1:+70080077 None:intergenic
TTCAAAAGAAGAAGCCAACA+TGG 0.575873 2_1:-70074477 Msa0221470:CDS
CTGGTCGAGAAAACAGCTCA+AGG 0.576958 2_1:-70075951 Msa0221470:CDS
GCATGGGCGCTGGCACCGGT+AGG 0.578389 2_1:-70079705 Msa0221470:CDS
GGTGAGGGTGGTTGTTAGCG+AGG 0.579694 2_1:-70075478 Msa0221470:CDS
ACCGTTTCCACCTCATCAGT+GGG 0.579868 2_1:+70075426 None:intergenic
TGAGCAATGAGAGTAAGAAG+AGG 0.581587 2_1:-70079389 Msa0221470:CDS
GAGTGGAATCGTCGAAGCAG+CGG 0.582766 2_1:-70079248 Msa0221470:CDS
CCGCCGTACTTGAAGACGGT+TGG 0.582958 2_1:-70080061 Msa0221470:CDS
ATCATCGGAATCCGAATGAT+CGG 0.583356 2_1:+70079446 None:intergenic
TACTAGAAAATGATATGGTG+AGG 0.585502 2_1:-70075494 Msa0221470:CDS
GAGTGTGAATGTGGCATCGT+TGG 0.586106 2_1:+70080037 None:intergenic
GAGAATGTCGTCGGAGAGTG+CGG 0.587884 2_1:-70079637 Msa0221470:CDS
CAACTTGTAAATATTGCCAT+AGG 0.591545 2_1:+70075539 None:intergenic
CGGAGACGATGTCGCTGTCA+CGG 0.592430 2_1:+70079563 None:intergenic
AATCGCCTCTCAATTAATGT+GGG 0.593317 2_1:-70074946 Msa0221470:CDS
ATCAACTGGGAAATCAATAG+GGG 0.594644 2_1:-70076799 Msa0221470:CDS
GGGGTGGAATCACGTGAAAG+TGG 0.594772 2_1:+70075813 None:intergenic
GCCTATGCCCACTGATGAGG+TGG 0.596324 2_1:-70075433 Msa0221470:CDS
TCCAACGTCGGTTCAACCGG+CGG 0.597168 2_1:+70079735 None:intergenic
CCCTCACAGATTGTCTCGTG+GGG 0.598176 2_1:-70076242 Msa0221470:CDS
TACAACGGTATTAGGAGAGT+GGG 0.599121 2_1:+70075668 None:intergenic
TGGCGTGCTGGTGGAGATGG+AGG 0.601012 2_1:+70076139 None:intergenic
GGCGGCGAGACCTTCTTCGC+CGG 0.601599 2_1:+70079753 None:intergenic
TCTTACCCACATTAATTGAG+AGG 0.603015 2_1:+70074941 None:intergenic
TGTTGAAAATTGTATCTGAT+GGG 0.603161 2_1:-70074296 Msa0221470:CDS
AGAGTGCTCAGGTTTGCCAA+TGG 0.603852 2_1:+70075887 None:intergenic
ATAAGTTCAAGTAACCTGAA+AGG 0.603929 2_1:+70076372 None:intergenic
TTGTTGTTTAAATAGACACA+TGG 0.605161 2_1:-70076955 Msa0221470:intron
GACGACATTCTCACCTCCGC+AGG 0.606852 2_1:+70079648 None:intergenic
TTCCGTAGATGCGAATGTGA+AGG 0.608396 2_1:-70076700 Msa0221470:CDS
TAGTGAAGTACATGAAAGAG+TGG 0.609138 2_1:-70079265 Msa0221470:CDS
TGCTAACTTCTTCATCAGTG+TGG 0.610615 2_1:+70076866 None:intergenic
GGTGTGAATTCGTTTCATCT+GGG 0.612104 2_1:+70080181 None:intergenic
CCCCACGAGACAATCTGTGA+GGG 0.612279 2_1:+70076242 None:intergenic
AGTGCCTATGCCCACTGATG+AGG 0.613534 2_1:-70075436 Msa0221470:CDS
GCTAACTTCTTCATCAGTGT+GGG 0.616189 2_1:+70076867 None:intergenic
TTCAAGTAACCTGAAAGGCA+GGG 0.617461 2_1:+70076377 None:intergenic
CGTTGTACCTGCGAGCACAA+AGG 0.617783 2_1:-70075652 Msa0221470:CDS
GCACCAGATCGACGACCTAC+CGG 0.617828 2_1:+70079690 None:intergenic
TGTTGACTTTGAATGAAACA+TGG 0.618533 2_1:+70074895 None:intergenic
TCATCCGCCGTACTTGAAGA+CGG 0.619930 2_1:-70080065 Msa0221470:CDS
ACTAGAAAATGATATGGTGA+GGG 0.621336 2_1:-70075493 Msa0221470:CDS
TGTATCATCTCAGAAACGAC+CGG 0.621725 2_1:-70079589 Msa0221470:CDS
TGCGGAGGTGAGAATGTCGT+CGG 0.624806 2_1:-70079646 Msa0221470:CDS
CGTTGTGCCTCCTATACCAG+AGG 0.630159 2_1:-70075619 Msa0221470:CDS
CTTTGTGCTCGCAGGTACAA+CGG 0.631658 2_1:+70075653 None:intergenic
TGATGAACATTAAGATCACT+TGG 0.631789 2_1:+70072840 None:intergenic
AAGAAATGGATTGCATATGT+GGG 0.632917 2_1:-70076535 Msa0221470:CDS
TGGTGTCAAGTCTGATCACA+AGG 0.635083 2_1:-70072910 Msa0221470:CDS
GAATCTAACCTGCTTCGGGA+AGG 0.636341 2_1:+70076918 None:intergenic
TTACGAAGCATATGATTCAG+AGG 0.636705 2_1:-70079412 Msa0221470:CDS
TAGGGGACAATCGCCTCTCG+AGG 0.637360 2_1:-70076455 Msa0221470:CDS
GTACAACGGTATTAGGAGAG+TGG 0.638670 2_1:+70075667 None:intergenic
GATGGATATCATAAGCTGCA+AGG 0.639332 2_1:-70074502 Msa0221470:CDS
GTATCCTTTGTCCATCAGTA+CGG 0.641186 2_1:+70076838 None:intergenic
ATCTAGTTCAGCACTCACAC+TGG 0.641230 2_1:+70072932 None:intergenic
AGAAAATGATATGGTGAGGG+TGG 0.643088 2_1:-70075490 Msa0221470:CDS
TTGAATTTGATCAATCAACT+GGG 0.645094 2_1:-70076812 Msa0221470:CDS
ATCAGGAGATTACACATCAG+AGG 0.647952 2_1:-70076086 Msa0221470:CDS
TGTGCCTCCTATACCAGAGG+AGG 0.648953 2_1:-70075616 Msa0221470:CDS
ACCCCTCACAGATTGTCTCG+TGG 0.649609 2_1:-70076244 Msa0221470:CDS
GATGTCGCTGTCACGGACGC+CGG 0.649955 2_1:+70079570 None:intergenic
ACGAACTTCATGATTTGTGG+TGG 0.651453 2_1:+70080113 None:intergenic
GACTTCTAGATATATACATG+GGG 0.652113 2_1:-70076482 Msa0221470:CDS
TATATACATGGGGATCTTAG+GGG 0.653509 2_1:-70076472 Msa0221470:CDS
TCCACCTCATCAGTGGGCAT+AGG 0.655000 2_1:+70075432 None:intergenic
CACTCAGAAACAACCTGCGG+AGG 0.655092 2_1:-70079661 Msa0221470:CDS
ACGACAGGGACAATCCATGT+TGG 0.656668 2_1:+70074463 None:intergenic
GCCGCCGGTTGAACCGACGT+TGG 0.657288 2_1:-70079736 Msa0221470:CDS
ACATGATCCAAGTAATGCTG+AGG 0.659330 2_1:-70074875 Msa0221470:CDS
CGTACTTGGAGATGGTTCAC+CGG 0.662231 2_1:-70079772 Msa0221470:CDS
AGTGTGAGTGCTGAACTAGA+TGG 0.666413 2_1:-70072930 Msa0221470:CDS
AATGTCGTCGGAGAGTGCGG+AGG 0.671139 2_1:-70079634 Msa0221470:CDS
TGCATCGATGAGTGTGAATG+TGG 0.673235 2_1:+70080028 None:intergenic
TTCACACTCATCGATGCATG+GGG 0.674550 2_1:-70080023 Msa0221470:CDS
CTCTGGTATAGGAGGCACAA+CGG 0.681623 2_1:+70075620 None:intergenic
AGAAAATTATAGGCCTCGAG+AGG 0.687645 2_1:+70076442 None:intergenic
AAAACCATCAATGACCATCA+CGG 0.688430 2_1:-70079939 Msa0221470:CDS
AAATCCTGAGCCATTCGATG+AGG 0.689499 2_1:-70074158 Msa0221470:CDS
ATCGTCTCCGGAGAGCGCGG+GGG 0.695936 2_1:-70079550 Msa0221470:CDS
TTGACCGTACTGATGGACAA+AGG 0.697921 2_1:-70076842 Msa0221470:CDS
CCCACGAGACAATCTGTGAG+GGG 0.701434 2_1:+70076243 None:intergenic
CCTCACAGATTGTCTCGTGG+GGG 0.705999 2_1:-70076241 Msa0221470:CDS
GAGCACTCAGAAACAACCTG+CGG 0.724373 2_1:-70079664 Msa0221470:CDS
TGTGGAATTAGGGCACAGAG+AGG 0.738231 2_1:-70079349 Msa0221470:CDS
CATGCCGGAACATCCAACGT+CGG 0.742443 2_1:+70079723 None:intergenic
CAACCTGAGAGTTATGAGTG+CGG 0.745301 2_1:-70074339 Msa0221470:CDS
CCAACCGTCTTCAAGTACGG+CGG 0.791655 2_1:+70080061 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTCCTTTAA+TGG + chr2_1:70079269-70079288 None:intergenic 10.0%
!!! TATTTGATTTTTTCTTTTAT+AGG - chr2_1:70079952-70079971 Msa0221470:CDS 10.0%
!! TAAAGGAAAAATAAAAAAAC+TGG - chr2_1:70079270-70079289 Msa0221470:CDS 15.0%
!!! TCTAATATTATAATTTTGAC+AGG + chr2_1:70079868-70079887 None:intergenic 15.0%
!! TTAATTACTAAATTCACCTT+TGG - chr2_1:70078603-70078622 Msa0221470:intron 20.0%
!! TCAAAATTCATTCAGATATT+TGG - chr2_1:70078806-70078825 Msa0221470:intron 20.0%
!! TTGATTCTTGAATTTATTCA+AGG - chr2_1:70078887-70078906 Msa0221470:intron 20.0%
!! TTAGAAACAACAAAAGAAAA+TGG + chr2_1:70079038-70079057 None:intergenic 20.0%
!!! TGTTTTACTTAATTTTTCCA+TGG + chr2_1:70079298-70079317 None:intergenic 20.0%
!! GAAAAATTAAGTAAAACACA+GGG - chr2_1:70079300-70079319 Msa0221470:CDS 20.0%
!!! AATAATGTTACTAGTTCTAT+CGG - chr2_1:70079485-70079504 Msa0221470:CDS 20.0%
!! TTGAAATTGAATCAATACAA+GGG + chr2_1:70079604-70079623 None:intergenic 20.0%
!! ATTGAAATTGAATCAATACA+AGG + chr2_1:70079605-70079624 None:intergenic 20.0%
!!! ACAGGTTTTTTGATTTTTTT+CGG + chr2_1:70079850-70079869 None:intergenic 20.0%
!! ATTTAAAACAACTTACGACA+GGG + chr2_1:70078541-70078560 None:intergenic 25.0%
!! AATTTAAAACAACTTACGAC+AGG + chr2_1:70078542-70078561 None:intergenic 25.0%
! ACACTAAATTTGAATACCAA+AGG + chr2_1:70078622-70078641 None:intergenic 25.0%
! ATGTTGAAAATTGTATCTGA+TGG - chr2_1:70078690-70078709 Msa0221470:intron 25.0%
! TGTTGAAAATTGTATCTGAT+GGG - chr2_1:70078691-70078710 Msa0221470:intron 25.0%
! TCTATTCTGTTAACTAACAA+TGG - chr2_1:70078941-70078960 Msa0221470:intron 25.0%
! TACTGCATAAAAGTAAAACT+TGG + chr2_1:70079125-70079144 None:intergenic 25.0%
!!! TACTATTTTTGAGTTGTGTA+CGG - chr2_1:70079152-70079171 Msa0221470:intron 25.0%
! AAATAAAAAAACTGGTACCA+TGG - chr2_1:70079278-70079297 Msa0221470:CDS 25.0%
! GGAAAAATTAAGTAAAACAC+AGG - chr2_1:70079299-70079318 Msa0221470:CDS 25.0%
!!! ACACAATGTCTATTTTAAAG+TGG + chr2_1:70079456-70079475 None:intergenic 25.0%
! CTAGTAACATTATTCAATCT+TGG + chr2_1:70079479-70079498 None:intergenic 25.0%
!!! ATAATGTTACTAGTTCTATC+GGG - chr2_1:70079486-70079505 Msa0221470:CDS 25.0%
! TAGTAATACTGATGTTCAAA+TGG - chr2_1:70079894-70079913 Msa0221470:CDS 25.0%
! AGTCTTGATTGTATTCAATT+TGG + chr2_1:70080113-70080132 None:intergenic 25.0%
!! ACATAGTTGATTCATGTATA+GGG - chr2_1:70080169-70080188 Msa0221470:CDS 25.0%
!! GATTATTGATTCATGGAAGA+AGG - chr2_1:70078713-70078732 Msa0221470:intron 30.0%
TGTTAGTTAACAGAATAGAG+AGG + chr2_1:70078940-70078959 None:intergenic 30.0%
CTATCAAGTGTCAAAACAAT+AGG + chr2_1:70079073-70079092 None:intergenic 30.0%
AGTAACATGTATCCTTCAAA+TGG + chr2_1:70079223-70079242 None:intergenic 30.0%
GTTACTGATCTGGTAATAAA+CGG - chr2_1:70079237-70079256 Msa0221470:CDS 30.0%
TTAGAACAAGAAAAGACCTT+TGG - chr2_1:70079328-70079347 Msa0221470:CDS 30.0%
GTCATAAACCATAATTCTGT+AGG - chr2_1:70079391-70079410 Msa0221470:CDS 30.0%
!! ATCGGGTTGTGTATTTTAAA+CGG - chr2_1:70079503-70079522 Msa0221470:CDS 30.0%
!! TTGTGTATTTTAAACGGTGT+CGG - chr2_1:70079509-70079528 Msa0221470:CDS 30.0%
AGTAATACCATAACTAAACG+AGG - chr2_1:70079777-70079796 Msa0221470:CDS 30.0%
GTAATACCATAACTAAACGA+GGG - chr2_1:70079778-70079797 Msa0221470:CDS 30.0%
TGATGAACATTAAGATCACT+TGG + chr2_1:70080150-70080169 None:intergenic 30.0%
! CACATAGTTGATTCATGTAT+AGG - chr2_1:70080168-70080187 Msa0221470:CDS 30.0%
!! CTGATGGGATTATTGATTCA+TGG - chr2_1:70078706-70078725 Msa0221470:intron 35.0%
ATAAGTTCATCCTCATCGAA+TGG + chr2_1:70078842-70078861 None:intergenic 35.0%
ATAAGATGCTGAAGATTCAC+AGG + chr2_1:70078999-70079018 None:intergenic 35.0%
!! AAAACTTGGTGTGTATCAAC+TGG + chr2_1:70079111-70079130 None:intergenic 35.0%
CAGATTTACATTCTCTCTGA+TGG - chr2_1:70079189-70079208 Msa0221470:intron 35.0%
! ATGGATTTAGAGCCATTTGA+AGG - chr2_1:70079208-70079227 Msa0221470:CDS 35.0%
AAGGATACATGTTACTGATC+TGG - chr2_1:70079227-70079246 Msa0221470:CDS 35.0%
TAAACGGTGTCTTCCATTAA+AGG - chr2_1:70079253-70079272 Msa0221470:CDS 35.0%
TATGATGAAAGTGATGCCAA+AGG + chr2_1:70079347-70079366 None:intergenic 35.0%
TAAACCATAATTCTGTAGGC+TGG - chr2_1:70079395-70079414 Msa0221470:CDS 35.0%
!! GCTGGTTTCTTTTCTTTTTC+TGG - chr2_1:70079413-70079432 Msa0221470:CDS 35.0%
GATGTTCAAATGGAAGTTTC+AGG - chr2_1:70079904-70079923 Msa0221470:CDS 35.0%
GGTGTGAATTCGTTTCATCT+GGG + chr2_1:70072809-70072828 None:intergenic 40.0%
TCAAACTTGCACAACGTTGT+CGG + chr2_1:70078871-70078890 None:intergenic 40.0%
ATTCACAGGCAGAGGAAAAA+AGG + chr2_1:70078985-70079004 None:intergenic 40.0%
GAAACCAGCCTACAGAATTA+TGG + chr2_1:70079402-70079421 None:intergenic 40.0%
ATAACTAAACGAGGGCAACA+GGG - chr2_1:70079786-70079805 Msa0221470:CDS 40.0%
TATAGATGTCGTTGCTGAGA+AGG - chr2_1:70080017-70080036 Msa0221470:CDS 40.0%
!! TTAAGATCACTTGGTGTTGC+TGG + chr2_1:70080141-70080160 None:intergenic 40.0%
CGGTGTGAATTCGTTTCATC+TGG + chr2_1:70072810-70072829 None:intergenic 45.0%
CAACCTGAGAGTTATGAGTG+CGG - chr2_1:70078648-70078667 Msa0221470:intron 45.0%
AAATCCTGAGCCATTCGATG+AGG - chr2_1:70078829-70078848 Msa0221470:intron 45.0%
CGTGAAGTACATCTTTGCAC+TGG - chr2_1:70079714-70079733 Msa0221470:CDS 45.0%
CTGTTGCCCTCGTTTAGTTA+TGG + chr2_1:70079787-70079806 None:intergenic 45.0%
CATAACTAAACGAGGGCAAC+AGG - chr2_1:70079785-70079804 Msa0221470:CDS 45.0%
ATACAAATCACGTGTCACGC+AGG - chr2_1:70079817-70079836 Msa0221470:CDS 45.0%
! ATCTAGTTCAGCACTCACAC+TGG + chr2_1:70080058-70080077 None:intergenic 45.0%
!! AGTGTGAGTGCTGAACTAGA+TGG - chr2_1:70080057-70080076 Msa0221470:CDS 45.0%
! TGGTGTCAAGTCTGATCACA+AGG - chr2_1:70080077-70080096 Msa0221470:CDS 45.0%
ACGACAGGGACAATCCATGT+TGG + chr2_1:70078527-70078546 None:intergenic 50.0%
TAGCCGCACTCATAACTCTC+AGG + chr2_1:70078654-70078673 None:intergenic 50.0%
TCATCCTCATCGAATGGCTC+AGG + chr2_1:70078836-70078855 None:intergenic 50.0%
TGCTGAAGATTCACAGGCAG+AGG + chr2_1:70078993-70079012 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 70072794 70080215 70072794 ID=Msa0221470;Name=Msa0221470
chr2_1 mRNA 70072794 70080215 70072794 ID=Msa0221470-mRNA-1;Parent=Msa0221470;Name=Msa0221470-mRNA-1;_AED=0.16;_eAED=0.16;_QI=17|0.84|0.78|0.85|0.92|0.85|14|0|1136
chr2_1 exon 70072794 70072987 70072794 ID=Msa0221470-mRNA-1:exon:19982;Parent=Msa0221470-mRNA-1
chr2_1 exon 70073084 70073170 70073084 ID=Msa0221470-mRNA-1:exon:19981;Parent=Msa0221470-mRNA-1
chr2_1 exon 70074125 70074188 70074125 ID=Msa0221470-mRNA-1:exon:19980;Parent=Msa0221470-mRNA-1
chr2_1 exon 70074275 70074370 70074275 ID=Msa0221470-mRNA-1:exon:19979;Parent=Msa0221470-mRNA-1
chr2_1 exon 70074465 70074531 70074465 ID=Msa0221470-mRNA-1:exon:19978;Parent=Msa0221470-mRNA-1
chr2_1 exon 70074621 70074725 70074621 ID=Msa0221470-mRNA-1:exon:19977;Parent=Msa0221470-mRNA-1
chr2_1 exon 70074811 70074975 70074811 ID=Msa0221470-mRNA-1:exon:19976;Parent=Msa0221470-mRNA-1
chr2_1 exon 70075057 70075280 70075057 ID=Msa0221470-mRNA-1:exon:19975;Parent=Msa0221470-mRNA-1
chr2_1 exon 70075362 70075979 70075362 ID=Msa0221470-mRNA-1:exon:19974;Parent=Msa0221470-mRNA-1
chr2_1 exon 70076060 70076308 70076060 ID=Msa0221470-mRNA-1:exon:19973;Parent=Msa0221470-mRNA-1
chr2_1 exon 70076387 70076593 70076387 ID=Msa0221470-mRNA-1:exon:19972;Parent=Msa0221470-mRNA-1
chr2_1 exon 70076677 70076962 70076677 ID=Msa0221470-mRNA-1:exon:19971;Parent=Msa0221470-mRNA-1
chr2_1 exon 70078766 70078806 70078766 ID=Msa0221470-mRNA-1:exon:19970;Parent=Msa0221470-mRNA-1
chr2_1 exon 70079191 70080215 70079191 ID=Msa0221470-mRNA-1:exon:19969;Parent=Msa0221470-mRNA-1
chr2_1 five_prime_UTR 70080199 70080215 70080199 ID=Msa0221470-mRNA-1:five_prime_utr;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70079191 70080198 70079191 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70078766 70078806 70078766 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70076677 70076962 70076677 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70076387 70076593 70076387 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70076060 70076308 70076060 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70075362 70075979 70075362 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70075057 70075280 70075057 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70074811 70074975 70074811 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70074621 70074725 70074621 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70074465 70074531 70074465 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70074275 70074370 70074275 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70074125 70074188 70074125 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70073084 70073170 70073084 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
chr2_1 CDS 70072794 70072987 70072794 ID=Msa0221470-mRNA-1:cds;Parent=Msa0221470-mRNA-1
Gene Sequence

>Msa0221470

ATGAAACGAATTCACACCGCTAACCGATTCGAAAAGCACAAACCCCAACAAAAACAAACAACACCACCACAAATCATGAAGTTCGTCACCGAAGCTCAACCATCTCCGTCTTCATCCGCCGTACTTGAAGACGGTTGGTCCAACGATGCCACATTCACACTCATCGATGCATGGGGCAAACTTTCCAAAACGCATAACCGCAAATATTTGCGTCAGTATCACTGGAAAGAGATAGCGAAAACCATCAATGACCATCACGGTTACTCTAGAAAAGAGCGTCGCACATACGTTCATTGCAAAAATCGATTCGAAGCGCTTAAGAAGAAGTACGCGATTGAAAAAGCTAGGGTTTCGGAAAACGAGTTTTACGATGATGAATGGGTGTTTTTCGAGAAACTTGATTCCGTACTTGGAGATGGTTCACCGGCGAAGAAGGTCTCGCCGCCGGTTGAACCGACGTTGGATGTTCCGGCATGGGCGCTGGCACCGGTAGGTCGTCGATCTGGTGCTCAGAGCACTCAGAAACAACCTGCGGAGGTGAGAATGTCGTCGGAGAGTGCGGAGGAGGAGTCACGTTTTCGCCGGAATGTATCATCTCAGAAACGACCGGCGTCCGTGACAGCGACATCGTCTCCGGAGAGCGCGGGGGACTTACGTTTTCGGAGAAATTTATCTGCTTTTGCTGCAGCTGCTGCTGCAGCAGCTGAAGTGGAGGTTGATAATTCGGATTCCGATCATTCGGATTCCGATGATTCGGATTTCAATTACGAAGCATATGATTCAGAGGTGAGCAATGAGAGTAAGAAGAGGAAGAGAGGAAGAAGGGATGTGGAATTAGGGCACAGAGAGGTTGCAGGAAGAAAGGATAGGGAATTAGGGTATAGAGAGGTTACACATGCTATGGAGAAGCTTAGTGAAGTACATGAAAGAGTGGAATCGTCGAAGCAGCGGAAAAATGTGGATTTGGAGAAACAGAAAATGCAGAAACAGAAGATGCAATTTTCAAAGGATTCTCAGAGAATGCAGCTGCAAAAAACCAACAACTCAAAACACATGGATGATGTATCAGCTCCTTCCCGAAGCAGGTTAGATTCTCAGTCTACCAAAAAGAAAGTTAGAGGTCCCACACTGATGAAGAAGTTAGCACTTGACCGTACTGATGGACAAAGGATACCGATTGAATTTGATCAATCAACTGGGAAATCAATAGGGGAAAACAAGACAAAGTTCAAGAGTTATTTGGGTTTCCTTGGTCGAAGCAAAATCAGTATTTTGATAGAAGATTGGGATTCCGTAGATGCGAATGTGAAGGATGAAATTTGGACAGAGATCCTGAAAATATGGGATGTTCCTAATTCTGGCTTCTTACGAAAGAAATGGATTGCATATGTGGGCGAGCGTTGGAGGGCATTTAAGACTAATTTGACTTCTAGATATATACATGGGGATCTTAGGGGACAATCGCCTCTCGAGGCCTATAATTTTCTTGATGAGGAAACATGGCAAGCGTTTGTTCAGATGCGACTGGACCCTGCCTTTCAGGAGATAAGAAAGAAAGCTCAAATGAGTTCGGCTCATCATACAACCCCTCACAGATTGTCTCGTGGGGGATATGAGTTGCTCCAAGAGAAGATAATGCAAGAGAAGTTAAAACAAAAGCAAGATTCATTGGGTGATTCGGTAGCTGCACCTCCATCTCCACCAGCACGCCATGAGCAATGGAAGAGAGCCCGACAAAAGCCATCAGGAGATTACACATCAGAGGACTCACGCATTATTGCCGAGAAAATTGATTCTCTGGTCGAGAAAACAGCTCAAGGAACTTTTGTTCCACAAGGACGTAAAGATATTTTGGCAGAAGCCATTGGCAAACCTGAGCACTCTGGTTTTGTTCGTGGTGTTGGTCGAGGTGTGGGTATTAAGCAATACTTTGGACCACTTTCACGTGATTCCACCCCACCTGTTTTTAGTAGTGAACAATTGAAGACCATAAAAGTGGAGCTTACTCAGCAAATTAAAGAGGAATTGATGCAGGATCTGGAAGCTATGGGTTTCTCTAAAAAACCCTCGAATTTCCCAACCCACTCTCCTAATACCGTTGTACCTGCGAGCACAAAGGGTAGTTCTTCCGTTGTGCCTCCTATACCAGAGGAGGATGAAATCCCAGAACGATGTGAATTGTATGTTGATGATTTTCTTCATGCAGTGGCCTATGGCAATATTTACAAGTTGGGGCCTACCATACATAATCAGATACTAGAAAATGATATGGTGAGGGTGGTTGTTAGCGAGGTGTTAGATGCTAACGCTCAAGTGCCTATGCCCACTGATGAGGTGGAAACGGTTGGGCAGGCCCTCAACAATTTTATTCAATGGCCAAAAAGACTTGTGGAGATTGTTTCTGATAAGGATGTTGATGGATATGAAAAAGACAATGTTTCACCCAAAAGGTCAAACCCTCAACTAGATTCTGTTCAACAATTGGTTTTAAAGGCGATGTGTATGTCAGAATCTATAAAGCTTGAGTTGGAACATGATAGAATGAAGTCTCTTTGGCTCTCACAGAGAGATATTATGGAGTTGTGTATGGGTAAACAAGAGTTATCCATAACTATTCTACGATTGTGGTTAACGTATTTGAATCGCCTCTCAATTAATGTGGGTAAGAGTGACTTATATGGATTTATTGATCCATGTTTCATTCAAAGTCAACATGATCCAAGTAATGCTGAGGCCTACATACAAAATAAGTTATGCGATGATAAAAAAGAGTGTTACCTAGCACCTTATTACAATAATCGTCATTGGCAATTGCTCATTATTTGTCCTAAGAAGAATAATGTAGTATTCCTATGTTCGCTGGAAAGAAAGCCAGATAAAAATATTATTCAAACTGTTGATTCAGCTTTGGATGGATATCATAAGCTGCAAGGTGTTCAAAAGAAGAAGCCAACATGGATTGTCCCTGTCTGTCAAAGACAACCTGAGAGTTATGAGTGCGGCTACTATATTATGATACATATGTTGAAAATTGTATCTGATGGGATTATTGATTCATGGAAGAAGATATTTGGAAATCCTGAGCCATTCGATGAGGATGAACTTATAAACGTCCGACAACGTTGTGCAAGTTACAATCCGAAAAAAATCAAAAAACCTGTCAAAATTATAATATTAGACTCTGATAGTAATACTGATGTTCAAATGGAAGTTTCAGATGTCGTTGCTGAGAAGGATTCTAATGAGAAGACCAGTGTGAGTGCTGAACTAGATGGTGTCAAGTCTGATCACAAGGTTGATAATGACCAAATTGAATACAATCAAGACTTGACTCCAGCAACACCAAGTGATCTTAATGTTCATCACATAGTTGATTCATGTATAGGGAAGTTTTTTGAAGTTTATTCATAG

Protein sequence

>Msa0221470

MKRIHTANRFEKHKPQQKQTTPPQIMKFVTEAQPSPSSSAVLEDGWSNDATFTLIDAWGKLSKTHNRKYLRQYHWKEIAKTINDHHGYSRKERRTYVHCKNRFEALKKKYAIEKARVSENEFYDDEWVFFEKLDSVLGDGSPAKKVSPPVEPTLDVPAWALAPVGRRSGAQSTQKQPAEVRMSSESAEEESRFRRNVSSQKRPASVTATSSPESAGDLRFRRNLSAFAAAAAAAAEVEVDNSDSDHSDSDDSDFNYEAYDSEVSNESKKRKRGRRDVELGHREVAGRKDRELGYREVTHAMEKLSEVHERVESSKQRKNVDLEKQKMQKQKMQFSKDSQRMQLQKTNNSKHMDDVSAPSRSRLDSQSTKKKVRGPTLMKKLALDRTDGQRIPIEFDQSTGKSIGENKTKFKSYLGFLGRSKISILIEDWDSVDANVKDEIWTEILKIWDVPNSGFLRKKWIAYVGERWRAFKTNLTSRYIHGDLRGQSPLEAYNFLDEETWQAFVQMRLDPAFQEIRKKAQMSSAHHTTPHRLSRGGYELLQEKIMQEKLKQKQDSLGDSVAAPPSPPARHEQWKRARQKPSGDYTSEDSRIIAEKIDSLVEKTAQGTFVPQGRKDILAEAIGKPEHSGFVRGVGRGVGIKQYFGPLSRDSTPPVFSSEQLKTIKVELTQQIKEELMQDLEAMGFSKKPSNFPTHSPNTVVPASTKGSSSVVPPIPEEDEIPERCELYVDDFLHAVAYGNIYKLGPTIHNQILENDMVRVVVSEVLDANAQVPMPTDEVETVGQALNNFIQWPKRLVEIVSDKDVDGYEKDNVSPKRSNPQLDSVQQLVLKAMCMSESIKLELEHDRMKSLWLSQRDIMELCMGKQELSITILRLWLTYLNRLSINVGKSDLYGFIDPCFIQSQHDPSNAEAYIQNKLCDDKKECYLAPYYNNRHWQLLIICPKKNNVVFLCSLERKPDKNIIQTVDSALDGYHKLQGVQKKKPTWIVPVCQRQPESYECGYYIMIHMLKIVSDGIIDSWKKIFGNPEPFDEDELINVRQRCASYNPKKIKKPVKIIILDSDSNTDVQMEVSDVVAEKDSNEKTSVSAELDGVKSDHKVDNDQIEYNQDLTPATPSDLNVHHIVDSCIGKFFEVYS*