Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0383910 | KEH36091.1 | 97.994 | 698 | 11 | 1 | 1 | 698 | 1 | 695 | 0.0 | 1431 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0383910 | sp|Q8VYW1|PAPS4_ARATH | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0383910 | A0A072V338 | 97.994 | 698 | 11 | 1 | 1 | 698 | 1 | 695 | 0.0 | 1431 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0186230 | Msa0383910 | 0.894890 | 1.611330e-75 | -8.615850e-47 |
Msa0383910 | Msa0434390 | 0.883627 | 3.821726e-71 | -8.615850e-47 |
Msa0383910 | Msa0478090 | 0.995127 | 2.860498e-213 | -8.615850e-47 |
Msa0383910 | Msa0522160 | 0.919872 | 2.613917e-87 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0383910 | MtrunA17_Chr3g0140561 | 94.868 | 721 | 13 | 2 | 1 | 700 | 1 | 718 | 0.0 | 1416 |
Msa0383910 | MtrunA17_Chr8g0340751 | 66.901 | 568 | 157 | 5 | 3 | 549 | 9 | 566 | 0.0 | 778 |
Msa0383910 | MtrunA17_Chr6g0483461 | 60.229 | 523 | 179 | 5 | 18 | 516 | 4 | 521 | 0.0 | 670 |
Msa0383910 | MtrunA17_Chr8g0392531 | 60.314 | 509 | 176 | 4 | 29 | 516 | 19 | 522 | 0.0 | 660 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0383910 | AT4G32850.9 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 859 |
Msa0383910 | AT4G32850.5 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 859 |
Msa0383910 | AT4G32850.8 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
Msa0383910 | AT4G32850.10 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
Msa0383910 | AT4G32850.6 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
Msa0383910 | AT4G32850.2 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
Msa0383910 | AT4G32850.3 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
Msa0383910 | AT4G32850.1 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
Msa0383910 | AT4G32850.13 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT4G32850.15 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT4G32850.16 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT4G32850.4 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT4G32850.7 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT4G32850.17 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT4G32850.14 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT4G32850.12 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT4G32850.11 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
Msa0383910 | AT2G25850.4 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 842 |
Msa0383910 | AT2G25850.1 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 841 |
Msa0383910 | AT2G25850.3 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 841 |
Msa0383910 | AT2G25850.2 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 840 |
Msa0383910 | AT2G25850.6 | 70.087 | 575 | 147 | 3 | 30 | 583 | 26 | 596 | 0.0 | 839 |
Msa0383910 | AT2G25850.7 | 70.087 | 575 | 147 | 3 | 30 | 583 | 26 | 596 | 0.0 | 839 |
Msa0383910 | AT2G25850.8 | 70.087 | 575 | 147 | 3 | 30 | 583 | 26 | 596 | 0.0 | 839 |
Msa0383910 | AT2G25850.5 | 70.087 | 575 | 147 | 3 | 30 | 583 | 26 | 596 | 0.0 | 839 |
Msa0383910 | AT2G25850.9 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 838 |
Msa0383910 | AT1G17980.1 | 61.237 | 485 | 163 | 4 | 23 | 484 | 5 | 487 | 0.0 | 632 |
Msa0383910 | AT1G17980.2 | 61.602 | 362 | 116 | 3 | 144 | 484 | 1 | 360 | 9.11e-163 | 482 |
Msa0383910 | AT3G06560.1 | 33.186 | 452 | 253 | 9 | 49 | 475 | 21 | 448 | 3.56e-68 | 233 |
Find 217 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCTTAACATCCATCATTTC+AGG | 0.158083 | 3_1:+86949499 | None:intergenic |
CAAACTGTTCGAAGTCTTAA+TGG | 0.168443 | 3_1:-86950951 | Msa0383910:CDS |
AAACCATGCGGCTGAGAAAA+TGG | 0.183581 | 3_1:-86949590 | Msa0383910:CDS |
GTATGCAAGCATATCTATTT+TGG | 0.195681 | 3_1:-86951674 | Msa0383910:CDS |
TTTCGATGTGTTTAGGTTAC+TGG | 0.209043 | 3_1:-86950642 | Msa0383910:intron |
TGTTGGTTTCTAGATTCTTT+AGG | 0.216571 | 3_1:-86950545 | Msa0383910:CDS |
GATTCCTTGGAGGAGTAAAT+TGG | 0.220082 | 3_1:-86950620 | Msa0383910:CDS |
TGAAAGTTGTACTAGTAAAT+TGG | 0.221124 | 3_1:-86949419 | Msa0383910:CDS |
GTTGGTTTCTAGATTCTTTA+GGG | 0.224014 | 3_1:-86950544 | Msa0383910:CDS |
GGCTAATCAGATTAAGGTTT+TGG | 0.224463 | 3_1:-86947909 | Msa0383910:three_prime_UTR |
GTCCGCTTCTCTGGTTTATC+TGG | 0.228167 | 3_1:+86949478 | None:intergenic |
ACAGCACCCTCTTCCCAATT+TGG | 0.235857 | 3_1:+86949003 | None:intergenic |
GCTTTGTAGGAGGATAATTT+TGG | 0.238055 | 3_1:-86948052 | Msa0383910:intron |
TCTATAGGGCATAGCATTAC+AGG | 0.238894 | 3_1:+86950495 | None:intergenic |
CTGTTGCTTTGCTGAGGTAC+TGG | 0.247333 | 3_1:-86947983 | Msa0383910:exon |
AGGGTTCTTCTTCCTCTTGA+TGG | 0.251063 | 3_1:+86949519 | None:intergenic |
TCACCTCGCAATTGAGGTTC+TGG | 0.263013 | 3_1:+86948902 | None:intergenic |
ACGAACTGCATTTACCTATA+TGG | 0.264976 | 3_1:-86950467 | Msa0383910:CDS |
CTTGTTCTTGTTGTGGCGGC+GGG | 0.275169 | 3_1:+86953729 | None:intergenic |
AATGGAGGCTAATCAGATTA+AGG | 0.289876 | 3_1:-86947915 | Msa0383910:three_prime_UTR |
TGGAATTTGAATTTCATTAC+TGG | 0.299937 | 3_1:+86951718 | None:intergenic |
GAAACATAAATTTCCATTCC+CGG | 0.321696 | 3_1:+86949688 | None:intergenic |
GGAAGCTGATTGTTCAAGTT+TGG | 0.324383 | 3_1:+86953806 | None:intergenic |
AATTTACTAGTACAACTTTC+AGG | 0.325729 | 3_1:+86949421 | None:intergenic |
AACATACTAGGGATTGCATT+AGG | 0.327078 | 3_1:+86950564 | None:intergenic |
GAGAAAGTCAAGGGAGCGTT+TGG | 0.328886 | 3_1:+86953875 | None:intergenic |
TAAGCATATTTGCAGGTTCA+TGG | 0.333327 | 3_1:-86951966 | Msa0383910:intron |
CATATATTAACCTCGACATT+TGG | 0.344144 | 3_1:+86950894 | None:intergenic |
CTAACAGATGTCCGCTTCTC+TGG | 0.358311 | 3_1:+86949469 | None:intergenic |
TGCAGTTCGTTCTCTTCTAT+AGG | 0.367427 | 3_1:+86950480 | None:intergenic |
GCAGTTCGTTCTCTTCTATA+GGG | 0.376096 | 3_1:+86950481 | None:intergenic |
ATTGAATTTGGAAGTTTAGA+TGG | 0.377967 | 3_1:-86947593 | Msa0383910:three_prime_UTR |
CAATCAGCTTCCAACGATAA+TGG | 0.378069 | 3_1:-86953795 | Msa0383910:exon |
TTGTTGACTCCACTCATGAT+AGG | 0.379040 | 3_1:-86949234 | Msa0383910:CDS |
AACAACAAAGTTCCCACCTC+TGG | 0.389216 | 3_1:+86947739 | None:intergenic |
GGGTATGCAGGAGTAATTAT+TGG | 0.389243 | 3_1:+86950405 | None:intergenic |
TCTCAATCGTAACACTGAAT+TGG | 0.391289 | 3_1:-86953651 | Msa0383910:CDS |
GGGCATAGCATTACAGGGTT+TGG | 0.397753 | 3_1:+86950501 | None:intergenic |
GCAATTGAGGTTCTGGGTGC+TGG | 0.397766 | 3_1:+86948909 | None:intergenic |
GTTTAGGTTACTGGATTCCT+TGG | 0.400709 | 3_1:-86950633 | Msa0383910:intron |
CAATAATGTGAATCTCAAAC+TGG | 0.401939 | 3_1:+86953910 | None:intergenic |
TGCAGAATGCGCACAAGGCT+TGG | 0.402768 | 3_1:+86949828 | None:intergenic |
GTGGGGCCAGCAATTGAGAT+AGG | 0.409562 | 3_1:+86953683 | None:intergenic |
CTTTGCTGAGGTACTGGGAA+TGG | 0.409726 | 3_1:-86947977 | Msa0383910:exon |
AATCTAGAAACCAACATACT+AGG | 0.410770 | 3_1:+86950552 | None:intergenic |
AAATTATTATGTATGTATAC+TGG | 0.413244 | 3_1:-86949714 | Msa0383910:CDS |
GCACAACATCCTTGCTGAAA+TGG | 0.417902 | 3_1:-86951782 | Msa0383910:CDS |
CGAACTGCATTTACCTATAT+GGG | 0.423486 | 3_1:-86950466 | Msa0383910:CDS |
GGTTCTTCGCCGCCTTGATC+AGG | 0.423547 | 3_1:-86953474 | Msa0383910:intron |
AAGGAAGAGACAGGTGTGAT+TGG | 0.425105 | 3_1:-86953956 | Msa0383910:five_prime_UTR |
AAGAGACAGGTGTGATTGGT+TGG | 0.429468 | 3_1:-86953952 | Msa0383910:five_prime_UTR |
CATACAAAACTGTACCTTCA+AGG | 0.432406 | 3_1:+86950053 | None:intergenic |
GAAAGTTGTACTAGTAAATT+GGG | 0.437207 | 3_1:-86949418 | Msa0383910:CDS |
TCAAGGTTAGCTGTCTTAGC+CGG | 0.437995 | 3_1:+86950070 | None:intergenic |
CGAGTGCGTTTGTAACCATC+TGG | 0.438734 | 3_1:+86949628 | None:intergenic |
ACAAAACCTATCTCAATTGC+TGG | 0.439210 | 3_1:-86953689 | Msa0383910:CDS |
GCTTGTTCTTGTTGTGGCGG+CGG | 0.441177 | 3_1:+86953728 | None:intergenic |
TGTTCTTGTTGTGGCGGCGG+GGG | 0.441606 | 3_1:+86953731 | None:intergenic |
ATCTGTGTAGCCTCGTTGGC+GGG | 0.446189 | 3_1:+86952816 | None:intergenic |
AGGTTCTGGGTGCTGGCAAT+TGG | 0.448782 | 3_1:+86948916 | None:intergenic |
ATTGAAGGGGTTAGGCTAGA+TGG | 0.450370 | 3_1:-86949367 | Msa0383910:CDS |
TAGGTTACTGGATTCCTTGG+AGG | 0.452048 | 3_1:-86950630 | Msa0383910:CDS |
ACATACTAGGGATTGCATTA+GGG | 0.455503 | 3_1:+86950565 | None:intergenic |
GGAGGTGTAGAGCCACCGTT+AGG | 0.459771 | 3_1:+86953758 | None:intergenic |
TGTTGCTTTGCTGAGGTACT+GGG | 0.460057 | 3_1:-86947982 | Msa0383910:exon |
GAAGAAGAACCCTGAAATGA+TGG | 0.460726 | 3_1:-86949509 | Msa0383910:CDS |
CACCTCGCAATTGAGGTTCT+GGG | 0.462098 | 3_1:+86948903 | None:intergenic |
CAAGGTTAGCTGTCTTAGCC+GGG | 0.470013 | 3_1:+86950071 | None:intergenic |
CATGGGCTTGCAAAGAAAAG+AGG | 0.470510 | 3_1:-86949800 | Msa0383910:CDS |
TGCAAAATCTTATGCTACAC+TGG | 0.471864 | 3_1:-86948008 | Msa0383910:CDS |
GCTTAACATCCATCATTTCA+GGG | 0.473503 | 3_1:+86949500 | None:intergenic |
ATTACTGGGACATGTGCATC+AGG | 0.474856 | 3_1:+86951733 | None:intergenic |
AAGTCATCTGATGGACTCTC+AGG | 0.475860 | 3_1:-86949307 | Msa0383910:CDS |
GCAAATCTATAGATATTCCT+TGG | 0.478520 | 3_1:+86951698 | None:intergenic |
GATGGACCTTTCAGAAGAGC+TGG | 0.480410 | 3_1:+86949537 | None:intergenic |
CGGAACCGTCTGAGATATCC+AGG | 0.480431 | 3_1:+86950994 | None:intergenic |
TAATGTGATACCTGTCCCTA+TGG | 0.485105 | 3_1:+86950430 | None:intergenic |
TTTGCTGAGGTACTGGGAAT+GGG | 0.485818 | 3_1:-86947976 | Msa0383910:exon |
TGATTGTTCAAGTTTGGAGA+TGG | 0.485929 | 3_1:+86953812 | None:intergenic |
GGGTCTATTCACAGTGGCGG+TGG | 0.488614 | 3_1:-86950524 | Msa0383910:CDS |
AACCATGCGGCTGAGAAAAT+GGG | 0.488999 | 3_1:-86949589 | Msa0383910:CDS |
ATGAGTATCGAGTGTATTGA+AGG | 0.491692 | 3_1:-86949382 | Msa0383910:CDS |
GAATTCATGCAAGGGTATGC+AGG | 0.493227 | 3_1:+86950393 | None:intergenic |
CAATGCAGATCGTGAAAAGC+TGG | 0.495300 | 3_1:-86952852 | Msa0383910:intron |
TTTGGGGAATTGGGGTTTGG+AGG | 0.495456 | 3_1:+86953853 | None:intergenic |
AGAAACTCACCTCGCAATTG+AGG | 0.496667 | 3_1:+86948896 | None:intergenic |
AAGCACTCTTCGTGTTATGA+TGG | 0.498529 | 3_1:-86950352 | Msa0383910:CDS |
TTTCACAAGGGCAGAATGTA+CGG | 0.499588 | 3_1:-86948947 | Msa0383910:CDS |
GTTACGATTGAGATCAGCTT+CGG | 0.503977 | 3_1:+86953661 | None:intergenic |
ATTCCTTGGAGGAGTAAATT+GGG | 0.506443 | 3_1:-86950619 | Msa0383910:CDS |
TATTTGCAGGTTCATGGACC+TGG | 0.508041 | 3_1:-86951960 | Msa0383910:intron |
GTTTGCTTGCGATGTGGATG+TGG | 0.508377 | 3_1:-86947719 | Msa0383910:three_prime_UTR |
GATACGACAAAGTGCAACTC+TGG | 0.509921 | 3_1:-86949562 | Msa0383910:CDS |
ATACACTCGATACTCATTTG+AGG | 0.510734 | 3_1:+86949388 | None:intergenic |
CAAAGAAAAGAGGGAGTAAG+AGG | 0.511284 | 3_1:-86949790 | Msa0383910:CDS |
ATCTAGAAACCAACATACTA+GGG | 0.511391 | 3_1:+86950553 | None:intergenic |
AGAAATAAGTGACCTGATCA+AGG | 0.513935 | 3_1:+86953462 | None:intergenic |
CTCATGATAGGCTGAAATCA+AGG | 0.514106 | 3_1:-86949222 | Msa0383910:CDS |
GCTAAGACAGCTAACCTTGA+AGG | 0.516604 | 3_1:-86950067 | Msa0383910:intron |
TTTCTGCGAGGATCCCATAT+AGG | 0.521287 | 3_1:+86950453 | None:intergenic |
TCGAGTGTATTGAAGGGGTT+AGG | 0.521648 | 3_1:-86949375 | Msa0383910:CDS |
TGTATACTGGAAGCCGGGAA+TGG | 0.522453 | 3_1:-86949701 | Msa0383910:CDS |
TTGTTGGCTTGTTCTTGTTG+TGG | 0.523802 | 3_1:+86953722 | None:intergenic |
TATGTATGTATACTGGAAGC+CGG | 0.523871 | 3_1:-86949707 | Msa0383910:CDS |
CTATAGGGCATAGCATTACA+GGG | 0.524690 | 3_1:+86950496 | None:intergenic |
GGGACATGTGCATCAGGTAC+TGG | 0.525311 | 3_1:+86951739 | None:intergenic |
GGAATTTGAATTTCATTACT+GGG | 0.525618 | 3_1:+86951719 | None:intergenic |
GGATTGCATTAGGGTAAAGC+TGG | 0.527585 | 3_1:+86950574 | None:intergenic |
TGTGAAATCAAGTCATCTGA+TGG | 0.530158 | 3_1:-86949316 | Msa0383910:CDS |
GCTTGTCGAGACATTGTAGC+TGG | 0.530844 | 3_1:+86950371 | None:intergenic |
ATTACATTTACATAGCATGA+TGG | 0.533614 | 3_1:+86947679 | None:intergenic |
AGAAAGTCAAGGGAGCGTTT+GGG | 0.534390 | 3_1:+86953876 | None:intergenic |
GATTGTTCAAGTTTGGAGAT+GGG | 0.536486 | 3_1:+86953813 | None:intergenic |
CTCGCAGAAACCATAGGGAC+AGG | 0.538211 | 3_1:-86950440 | Msa0383910:CDS |
CGATTGAGATCAGCTTCGGT+GGG | 0.538821 | 3_1:+86953665 | None:intergenic |
GATCTGTGTAGCCTCGTTGG+CGG | 0.541806 | 3_1:+86952815 | None:intergenic |
TAATGCAATCCCTAGTATGT+TGG | 0.542179 | 3_1:-86950562 | Msa0383910:CDS |
TCTGCATACTCATGTGGATA+AGG | 0.542761 | 3_1:+86949856 | None:intergenic |
GGGTTTGGAGGAGAAAGTCA+AGG | 0.545782 | 3_1:+86953865 | None:intergenic |
GGATCCTCGCAGAAACCATA+GGG | 0.546951 | 3_1:-86950445 | Msa0383910:CDS |
ACGATTGAGATCAGCTTCGG+TGG | 0.547207 | 3_1:+86953664 | None:intergenic |
GAGTCAATGAGGACAAAGCT+CGG | 0.548398 | 3_1:-86949080 | Msa0383910:CDS |
GGGATCCTCGCAGAAACCAT+AGG | 0.548811 | 3_1:-86950446 | Msa0383910:CDS |
AAGCTTGCCAAATTGGGAAG+AGG | 0.549390 | 3_1:-86949010 | Msa0383910:CDS |
GCAAAATCTTATGCTACACT+GGG | 0.550317 | 3_1:-86948007 | Msa0383910:CDS |
ACCTCTCGATTTACATAGGA+AGG | 0.552492 | 3_1:+86951909 | None:intergenic |
CTTGATTTCACAATTGCTGT+CGG | 0.552840 | 3_1:+86949327 | None:intergenic |
GACTTTAGAAGTTCAGAATG+AGG | 0.554195 | 3_1:-86949200 | Msa0383910:intron |
ATGTATGTATACTGGAAGCC+GGG | 0.558185 | 3_1:-86949706 | Msa0383910:CDS |
ACAACAAAGTTCCCACCTCT+GGG | 0.562793 | 3_1:+86947740 | None:intergenic |
GAGGTACTGGGAATGGGCAA+AGG | 0.564355 | 3_1:-86947970 | Msa0383910:three_prime_UTR |
AGAAGCTGCAAGTAGAGAAG+AGG | 0.565106 | 3_1:-86953495 | Msa0383910:CDS |
TCTGATCTGTGTAGCCTCGT+TGG | 0.565299 | 3_1:+86952812 | None:intergenic |
TCGGAAACCACCATTATCGT+TGG | 0.566154 | 3_1:+86953785 | None:intergenic |
TCAATCTGCAGCGATTTCGT+TGG | 0.567422 | 3_1:-86947561 | Msa0383910:three_prime_UTR |
AGCTTGCCAAATTGGGAAGA+GGG | 0.568586 | 3_1:-86949009 | Msa0383910:CDS |
AGAGGGAGTAAGAGGTCAAG+AGG | 0.568590 | 3_1:-86949782 | Msa0383910:CDS |
CTGGATCCAGCTCTTCTGAA+AGG | 0.568898 | 3_1:-86949543 | Msa0383910:CDS |
GTAATGAAATTCAAATTCCA+AGG | 0.569489 | 3_1:-86951715 | Msa0383910:CDS |
ATGATGGATGTATCAATCAC+AGG | 0.570189 | 3_1:+86947695 | None:intergenic |
CATATTTGCGTACCCAGAGG+TGG | 0.572136 | 3_1:-86947752 | Msa0383910:three_prime_UTR |
TGATTTCAGCCTATCATGAG+TGG | 0.572409 | 3_1:+86949225 | None:intergenic |
TCTGATGGACTCTCAGGAAG+TGG | 0.572545 | 3_1:-86949301 | Msa0383910:CDS |
TTGTTCTTGTTGTGGCGGCG+GGG | 0.573047 | 3_1:+86953730 | None:intergenic |
CAGATAGAGCGAGATACAAG+TGG | 0.576975 | 3_1:-86949895 | Msa0383910:CDS |
GGAGAGGTTGGGTAGAATCC+CGG | 0.578285 | 3_1:-86950089 | Msa0383910:CDS |
ATGGGCTTGCAAAGAAAAGA+GGG | 0.578749 | 3_1:-86949799 | Msa0383910:CDS |
TAAGAATTTGATCCGCCACT+CGG | 0.580007 | 3_1:+86950925 | None:intergenic |
CAGGTGTGATTGGTTGGAGT+GGG | 0.580960 | 3_1:-86953946 | Msa0383910:five_prime_UTR |
AAAGTGTCTATGTCCACTCC+AGG | 0.581764 | 3_1:+86951942 | None:intergenic |
TAAACTTGTTCCAAATGTCG+AGG | 0.582707 | 3_1:-86950904 | Msa0383910:intron |
TATCACCTCTCGATTTACAT+AGG | 0.583433 | 3_1:+86951905 | None:intergenic |
ACAGGTGTGATTGGTTGGAG+TGG | 0.585338 | 3_1:-86953947 | Msa0383910:five_prime_UTR |
CTACACAGATCAGATGGTTG+AGG | 0.585660 | 3_1:-86952803 | Msa0383910:CDS |
GCCCTATTGTATATAAAACA+TGG | 0.585972 | 3_1:-86947817 | Msa0383910:three_prime_UTR |
AGAGCCACCGTTAGGGCTGT+CGG | 0.588141 | 3_1:+86953766 | None:intergenic |
GTGGTTTCCGACAGCCCTAA+CGG | 0.588449 | 3_1:-86953773 | Msa0383910:CDS |
AGTCAATGAGGACAAAGCTC+GGG | 0.588552 | 3_1:-86949079 | Msa0383910:CDS |
TCTTAATGGTTGCCGAGTGG+CGG | 0.589415 | 3_1:-86950937 | Msa0383910:CDS |
GACATAGACACTTTGTGCAT+CGG | 0.589418 | 3_1:-86951933 | Msa0383910:CDS |
GAGGTGTAGAGCCACCGTTA+GGG | 0.594118 | 3_1:+86953759 | None:intergenic |
TAGCCCAATTTACTCCTCCA+AGG | 0.594120 | 3_1:+86950616 | None:intergenic |
TGAGTATCGAGTGTATTGAA+GGG | 0.596741 | 3_1:-86949381 | Msa0383910:CDS |
CTGGGGCTGTTGCTTTGCTG+AGG | 0.597619 | 3_1:-86947989 | Msa0383910:exon |
GCAGGTTCATGGACCTGGAG+TGG | 0.599144 | 3_1:-86951955 | Msa0383910:intron |
CCCTATTGTATATAAAACAT+GGG | 0.599734 | 3_1:-86947816 | Msa0383910:three_prime_UTR |
AAACACACTCTAGCCTCTGT+GGG | 0.600970 | 3_1:+86949446 | None:intergenic |
TACATTGATGAACAGCATGA+TGG | 0.601254 | 3_1:-86947862 | Msa0383910:three_prime_UTR |
ACAAAGCTTGTAATTTCACA+AGG | 0.601723 | 3_1:-86948960 | Msa0383910:CDS |
TTTGTTGTTTGCTTGCGATG+TGG | 0.601983 | 3_1:-86947725 | Msa0383910:three_prime_UTR |
TCGTAACACTGAATTGGAGA+AGG | 0.606004 | 3_1:-86953645 | Msa0383910:intron |
GAAACACACTCTAGCCTCTG+TGG | 0.608395 | 3_1:+86949445 | None:intergenic |
TTGTAGCTGGAATTCATGCA+AGG | 0.612790 | 3_1:+86950384 | None:intergenic |
TTCATCAACATCATACAGAA+CGG | 0.616959 | 3_1:+86950974 | None:intergenic |
TAACTTCTTCCATTTCAGCA+AGG | 0.618799 | 3_1:+86951773 | None:intergenic |
GGTTTGGAGGAGAAAGTCAA+GGG | 0.619492 | 3_1:+86953866 | None:intergenic |
TTAGGGTCTATTCACAGTGG+CGG | 0.623887 | 3_1:-86950527 | Msa0383910:CDS |
AGCCAGATAAACCAGAGAAG+CGG | 0.626338 | 3_1:-86949480 | Msa0383910:CDS |
ATGATGGAACAGTTCTGCTA+TGG | 0.632180 | 3_1:-86950336 | Msa0383910:CDS |
CTTCTGAAAGGTCCATCAAG+AGG | 0.632992 | 3_1:-86949531 | Msa0383910:CDS |
ACGAGGCTACACAGATCAGA+TGG | 0.633586 | 3_1:-86952809 | Msa0383910:CDS |
GAGTATCGAGTGTATTGAAG+GGG | 0.634925 | 3_1:-86949380 | Msa0383910:CDS |
ACAAACGCACTCGAATGCCT+AGG | 0.636758 | 3_1:-86949618 | Msa0383910:CDS |
AGATAGAGCGAGATACAAGT+GGG | 0.636989 | 3_1:-86949894 | Msa0383910:CDS |
GACGTGTCTGCATACTCATG+TGG | 0.637311 | 3_1:+86949850 | None:intergenic |
GAGGGAGTAAGAGGTCAAGA+GGG | 0.638723 | 3_1:-86949781 | Msa0383910:CDS |
TTGGCTTGTTCTTGTTGTGG+CGG | 0.638810 | 3_1:+86953725 | None:intergenic |
TGAAGAGCTGATACAAACAA+TGG | 0.640811 | 3_1:-86947933 | Msa0383910:three_prime_UTR |
GATTGAGATCAGCTTCGGTG+GGG | 0.644690 | 3_1:+86953666 | None:intergenic |
CAAAGCTTGTAATTTCACAA+GGG | 0.646659 | 3_1:-86948959 | Msa0383910:CDS |
GCCGCATGGTTTATATGCCT+AGG | 0.651199 | 3_1:+86949601 | None:intergenic |
CACCCAGAACCTCAATTGCG+AGG | 0.656438 | 3_1:-86948905 | Msa0383910:intron |
GATGGAGATGCTTTAAAATG+CGG | 0.658430 | 3_1:-86947844 | Msa0383910:three_prime_UTR |
TGTAGCTGGAATTCATGCAA+GGG | 0.661048 | 3_1:+86950385 | None:intergenic |
AGAGCCAAAAGTGAAAATGA+CGG | 0.665482 | 3_1:+86952771 | None:intergenic |
ATATTTGCGTACCCAGAGGT+GGG | 0.665579 | 3_1:-86947751 | Msa0383910:three_prime_UTR |
AATGCAGATCGTGAAAAGCT+GGG | 0.665878 | 3_1:-86952851 | Msa0383910:intron |
TCAGCTTCCAACGATAATGG+TGG | 0.666264 | 3_1:-86953792 | Msa0383910:exon |
AAGTCTTAATGGTTGCCGAG+TGG | 0.667186 | 3_1:-86950940 | Msa0383910:CDS |
CAGGACCTGGATATCTCAGA+CGG | 0.670665 | 3_1:-86950999 | Msa0383910:CDS |
ATTTCAGAATGGAGTCAATG+AGG | 0.672391 | 3_1:-86949091 | Msa0383910:intron |
TCCTTCCTATGTAAATCGAG+AGG | 0.672788 | 3_1:-86951910 | Msa0383910:intron |
GGACAGCAGTTTGATATACG+TGG | 0.673860 | 3_1:-86949760 | Msa0383910:CDS |
GTAACAGACTCACCCCTAGT+CGG | 0.683713 | 3_1:+86952746 | None:intergenic |
AGTTGTACTAGTAAATTGGG+TGG | 0.697247 | 3_1:-86949415 | Msa0383910:CDS |
GCCTAGGCATATAAACCATG+CGG | 0.702233 | 3_1:-86949602 | Msa0383910:CDS |
AGAGCTGATACAAACAATGG+AGG | 0.705771 | 3_1:-86947930 | Msa0383910:three_prime_UTR |
AGTGGTACAATTACTGACGT+AGG | 0.706187 | 3_1:-86949283 | Msa0383910:CDS |
AAGCAGCTGACCCGCCAACG+AGG | 0.710522 | 3_1:-86952826 | Msa0383910:CDS |
GTTTCCGACAGCCCTAACGG+TGG | 0.710822 | 3_1:-86953770 | Msa0383910:CDS |
TCTTTAGGGTCTATTCACAG+TGG | 0.718102 | 3_1:-86950530 | Msa0383910:CDS |
TAACATATTTGCGTACCCAG+AGG | 0.718156 | 3_1:-86947755 | Msa0383910:three_prime_UTR |
CTGTCCCTATGGTTTCTGCG+AGG | 0.721142 | 3_1:+86950441 | None:intergenic |
TTGAGCTTAACAAATCACAG+TGG | 0.747863 | 3_1:-86950206 | Msa0383910:CDS |
GGACATCTGTTAGCCCACAG+AGG | 0.750930 | 3_1:-86949459 | Msa0383910:CDS |
AATAAGTGACCTGATCAAGG+CGG | 0.753360 | 3_1:+86953465 | None:intergenic |
CAAAATCTTATGCTACACTG+GGG | 0.787010 | 3_1:-86948006 | Msa0383910:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAAAATTTTGTAATGATA+AGG | - | chr3_1:86948610-86948629 | Msa0383910:intron | 10.0% |
!!! | AATATATGTTTTCATTAATT+TGG | - | chr3_1:86950614-86950633 | Msa0383910:CDS | 10.0% |
!! | AAATTTAAAAATGAAACAAA+AGG | + | chr3_1:86953239-86953258 | None:intergenic | 10.0% |
!! | ATTAATTATTAAATAGATGC+TGG | + | chr3_1:86948293-86948312 | None:intergenic | 15.0% |
!! | TATACTTAAACGTTTATATA+TGG | - | chr3_1:86949001-86949020 | Msa0383910:CDS | 15.0% |
!!! | TTAACAAATTCTTTTGTTTT+TGG | - | chr3_1:86951539-86951558 | Msa0383910:intron | 15.0% |
!! | AAATTATTATGTATGTATAC+TGG | - | chr3_1:86951779-86951798 | Msa0383910:CDS | 15.0% |
!! | CATATTATTAAATCAGAATA+TGG | - | chr3_1:86952972-86952991 | Msa0383910:intron | 15.0% |
!! | AGAATATAATAATTCAAGAG+TGG | + | chr3_1:86948326-86948345 | None:intergenic | 20.0% |
!! | ACGAATAAAGAAGAAAAAAA+AGG | + | chr3_1:86948555-86948574 | None:intergenic | 20.0% |
!! | CAATTTCTACAATAAATCAA+AGG | + | chr3_1:86948884-86948903 | None:intergenic | 20.0% |
!! | AAATTGGAAGTAATATTCAT+TGG | + | chr3_1:86949242-86949261 | None:intergenic | 20.0% |
!!! | GAGACATTTTATGATAAAAT+TGG | + | chr3_1:86949258-86949277 | None:intergenic | 20.0% |
!!! | AAATGGTATTTTCATAAAAC+AGG | + | chr3_1:86949453-86949472 | None:intergenic | 20.0% |
!! | AATAATTTAAGCATATTTGC+AGG | - | chr3_1:86949520-86949539 | Msa0383910:CDS | 20.0% |
!! | TATAGCAGAACATATATAAA+AGG | + | chr3_1:86949882-86949901 | None:intergenic | 20.0% |
!! | TTATTAAAACATTTGTCTCT+TGG | - | chr3_1:86949904-86949923 | Msa0383910:intron | 20.0% |
!! | TATTAAAACATTTGTCTCTT+GGG | - | chr3_1:86949905-86949924 | Msa0383910:intron | 20.0% |
!!! | TTATATTTCTTTCCTGTTTT+TGG | - | chr3_1:86950048-86950067 | Msa0383910:intron | 20.0% |
!! | TTAAGTTTGATGCATTATAT+TGG | - | chr3_1:86950290-86950309 | Msa0383910:intron | 20.0% |
!!! | ATTGAGATGTTTAAAGTTTT+GGG | - | chr3_1:86950721-86950740 | Msa0383910:intron | 20.0% |
!! | TGATTAATACTTCTAATGTT+AGG | - | chr3_1:86951261-86951280 | Msa0383910:intron | 20.0% |
!!! | GAAAAGCATGTATTAATATA+CGG | + | chr3_1:86951565-86951584 | None:intergenic | 20.0% |
!! | TTAAAAATGAAACAAAAGGA+AGG | + | chr3_1:86953235-86953254 | None:intergenic | 20.0% |
!!! | ATTTTGTTTGATTACTTTGT+CGG | - | chr3_1:86953255-86953274 | Msa0383910:intron | 20.0% |
!!! | TTGTAAATACTGTTTTTCTT+TGG | - | chr3_1:86953413-86953432 | Msa0383910:intron | 20.0% |
!!! | AATGTTGAAACAGATATTTT+TGG | - | chr3_1:86953873-86953892 | Msa0383910:five_prime_UTR | 20.0% |
!! | TTTTGTGAATCTATCTTTGT+TGG | + | chr3_1:86947790-86947809 | None:intergenic | 25.0% |
!!! | TTGTTGTTTCTTTCAGTTTT+TGG | - | chr3_1:86947947-86947966 | Msa0383910:three_prime_UTR | 25.0% |
!!! | TTATTGTCGTTTTCTTGTTT+TGG | - | chr3_1:86948140-86948159 | Msa0383910:intron | 25.0% |
!! | AATCAGTCTCACAAATTTTT+GGG | - | chr3_1:86948235-86948254 | Msa0383910:intron | 25.0% |
! | GTTAATTTCTCCTGATTATT+TGG | - | chr3_1:86948831-86948850 | Msa0383910:intron | 25.0% |
! | GGATAAACCAAAAATATATC+AGG | + | chr3_1:86949056-86949075 | None:intergenic | 25.0% |
!!! | GATATATTTTTGGTTTATCC+TGG | - | chr3_1:86949056-86949075 | Msa0383910:CDS | 25.0% |
! | TCAACATTATTTAATTCCCA+GGG | - | chr3_1:86949120-86949139 | Msa0383910:intron | 25.0% |
!! | TTTTATGCAATTCATAGAAC+AGG | + | chr3_1:86949418-86949437 | None:intergenic | 25.0% |
! | CACTTACAAAACAAACAAAA+TGG | + | chr3_1:86949470-86949489 | None:intergenic | 25.0% |
!!! | CATTTTGTTTGTTTTGTAAG+TGG | - | chr3_1:86949468-86949487 | Msa0383910:CDS | 25.0% |
! | GGAATTTGAATTTCATTACT+GGG | + | chr3_1:86949777-86949796 | None:intergenic | 25.0% |
! | TGGAATTTGAATTTCATTAC+TGG | + | chr3_1:86949778-86949797 | None:intergenic | 25.0% |
! | GTAATGAAATTCAAATTCCA+AGG | - | chr3_1:86949778-86949797 | Msa0383910:CDS | 25.0% |
! | AAGAAAACTCAACTTTACAA+AGG | + | chr3_1:86949968-86949987 | None:intergenic | 25.0% |
!! | TTTGTAAAGTTGAGTTTTCT+TGG | - | chr3_1:86949967-86949986 | Msa0383910:intron | 25.0% |
!! | TTGTAAAGTTGAGTTTTCTT+GGG | - | chr3_1:86949968-86949987 | Msa0383910:intron | 25.0% |
!!! | TTTAGTTGTTTTATTGCTTG+AGG | - | chr3_1:86950166-86950185 | Msa0383910:CDS | 25.0% |
! | AAAAATAAGGCATAAATGGA+TGG | + | chr3_1:86950355-86950374 | None:intergenic | 25.0% |
! | TAGGAAAAATAAGGCATAAA+TGG | + | chr3_1:86950359-86950378 | None:intergenic | 25.0% |
!!! | ATTTATGCCTTATTTTTCCT+AGG | - | chr3_1:86950358-86950377 | Msa0383910:CDS | 25.0% |
!! | TTTTTCTCCTAGGAAAAATA+AGG | + | chr3_1:86950368-86950387 | None:intergenic | 25.0% |
! | GGGATTAAAATGAATAAATG+AGG | + | chr3_1:86950410-86950429 | None:intergenic | 25.0% |
!! | TAAGGGAAACTAGATTTTAA+GGG | + | chr3_1:86950430-86950449 | None:intergenic | 25.0% |
!! | TTAAGGGAAACTAGATTTTA+AGG | + | chr3_1:86950431-86950450 | None:intergenic | 25.0% |
!!! | AAAGTGAAGTCAAGTTTTAA+GGG | + | chr3_1:86950447-86950466 | None:intergenic | 25.0% |
!! | TAAAGTGAAGTCAAGTTTTA+AGG | + | chr3_1:86950448-86950467 | None:intergenic | 25.0% |
!!! | CATTGAGATGTTTAAAGTTT+TGG | - | chr3_1:86950720-86950739 | Msa0383910:intron | 25.0% |
! | AAAGAAATTAGTAAGGTTGT+AGG | + | chr3_1:86950785-86950804 | None:intergenic | 25.0% |
! | GGTTACTAAAGAAATTAGTA+AGG | + | chr3_1:86950792-86950811 | None:intergenic | 25.0% |
! | CTAATTTCTTTAGTAACCAA+TGG | - | chr3_1:86950794-86950813 | Msa0383910:intron | 25.0% |
! | AATTTACTAGTACAACTTTC+AGG | + | chr3_1:86952075-86952094 | None:intergenic | 25.0% |
! | TGAAAGTTGTACTAGTAAAT+TGG | - | chr3_1:86952074-86952093 | Msa0383910:intron | 25.0% |
! | GAAAGTTGTACTAGTAAATT+GGG | - | chr3_1:86952075-86952094 | Msa0383910:intron | 25.0% |
! | GAAATTCCTTAATTAGAAGT+TGG | - | chr3_1:86952374-86952393 | Msa0383910:intron | 25.0% |
!! | TATTTGAGGACTTTTAGATT+AGG | - | chr3_1:86952621-86952640 | Msa0383910:intron | 25.0% |
!! | TTTTAGATTAGGAACAGTTA+TGG | - | chr3_1:86952632-86952651 | Msa0383910:intron | 25.0% |
! | ATGGAAGTGAAAAATAAACT+GGG | - | chr3_1:86952655-86952674 | Msa0383910:intron | 25.0% |
!!! | AGAGAGAGTATTTCAAAATA+TGG | - | chr3_1:86952754-86952773 | Msa0383910:intron | 25.0% |
! | ATATTAGATCAACTTTACCA+CGG | + | chr3_1:86952828-86952847 | None:intergenic | 25.0% |
! | GTGTTAACAAGTTATAACAA+GGG | + | chr3_1:86952948-86952967 | None:intergenic | 25.0% |
! | AGTGTTAACAAGTTATAACA+AGG | + | chr3_1:86952949-86952968 | None:intergenic | 25.0% |
! | ATGATCTTAGATTGTATATC+TGG | - | chr3_1:86953033-86953052 | Msa0383910:intron | 25.0% |
! | ATTATGAAATTCAATTGCCA+TGG | + | chr3_1:86953093-86953112 | None:intergenic | 25.0% |
! | AAATTAGAAAGAGCAAAGTT+AGG | + | chr3_1:86953284-86953303 | None:intergenic | 25.0% |
!!! | ATACTGTTTTTCTTTGGTTT+TGG | - | chr3_1:86953419-86953438 | Msa0383910:intron | 25.0% |
!! | CCCATGTTTTATATACAATA+GGG | + | chr3_1:86953680-86953699 | None:intergenic | 25.0% |
! | CCCTATTGTATATAAAACAT+GGG | - | chr3_1:86953677-86953696 | Msa0383910:CDS | 25.0% |
! | ATTACATTTACATAGCATGA+TGG | + | chr3_1:86953817-86953836 | None:intergenic | 25.0% |
! | ATTGAATTTGGAAGTTTAGA+TGG | - | chr3_1:86953900-86953919 | Msa0383910:five_prime_UTR | 25.0% |
CAATAATGTGAATCTCAAAC+TGG | + | chr3_1:86947586-86947605 | None:intergenic | 30.0% | |
! | ATTATTCCAAACGCGTTTTT+GGG | + | chr3_1:86947660-86947679 | None:intergenic | 30.0% |
!!! | CTTTCAGTTTTTGGTTGATT+CGG | - | chr3_1:86947956-86947975 | Msa0383910:three_prime_UTR | 30.0% |
!!! | TTTCAGTTTTTGGTTGATTC+GGG | - | chr3_1:86947957-86947976 | Msa0383910:three_prime_UTR | 30.0% |
AAATTTGTGAGACTGATTGT+GGG | + | chr3_1:86948233-86948252 | None:intergenic | 30.0% | |
AAAATTTGTGAGACTGATTG+TGG | + | chr3_1:86948234-86948253 | None:intergenic | 30.0% | |
! | CAATCAGTCTCACAAATTTT+TGG | - | chr3_1:86948234-86948253 | Msa0383910:intron | 30.0% |
GATAGATTAATGCTTGTTCA+GGG | - | chr3_1:86948473-86948492 | Msa0383910:intron | 30.0% | |
TTTCTTCTTTATTCGTGTAG+TGG | - | chr3_1:86948559-86948578 | Msa0383910:intron | 30.0% | |
TGTAGAAATTGACAGTGAAA+TGG | - | chr3_1:86948893-86948912 | Msa0383910:intron | 30.0% | |
GTAGAAATTGACAGTGAAAT+GGG | - | chr3_1:86948894-86948913 | Msa0383910:intron | 30.0% | |
!! | GTGAAATGGGTTGAATATAA+TGG | - | chr3_1:86948907-86948926 | Msa0383910:CDS | 30.0% |
!! | AATGGGTTGAATATAATGGT+AGG | - | chr3_1:86948911-86948930 | Msa0383910:CDS | 30.0% |
! | TGTAGAATTGTTGTTGTGAA+CGG | - | chr3_1:86948964-86948983 | Msa0383910:CDS | 30.0% |
AATAATAATACCACCTCTCA+CGG | - | chr3_1:86949026-86949045 | Msa0383910:CDS | 30.0% | |
GTAGAGTTTATAAAGGTTGT+TGG | + | chr3_1:86949093-86949112 | None:intergenic | 30.0% | |
GGGAATTAAATAATGTTGAG+AGG | + | chr3_1:86949119-86949138 | None:intergenic | 30.0% | |
CTCAACATTATTTAATTCCC+AGG | - | chr3_1:86949119-86949138 | Msa0383910:intron | 30.0% | |
TTGTTTACTTTCATGCAGTA+CGG | + | chr3_1:86949287-86949306 | None:intergenic | 30.0% | |
GCAAATCTATAGATATTCCT+TGG | + | chr3_1:86949798-86949817 | None:intergenic | 30.0% | |
! | GTATGCAAGCATATCTATTT+TGG | - | chr3_1:86949819-86949838 | Msa0383910:CDS | 30.0% |
ATAAGAACCAAACTTACTTC+TGG | + | chr3_1:86949850-86949869 | None:intergenic | 30.0% | |
! | TGTAAAGTTGAGTTTTCTTG+GGG | - | chr3_1:86949969-86949988 | Msa0383910:intron | 30.0% |
TGCTATATAGCATGTATAGT+GGG | + | chr3_1:86950113-86950132 | None:intergenic | 30.0% | |
ATGCTATATAGCATGTATAG+TGG | + | chr3_1:86950114-86950133 | None:intergenic | 30.0% | |
CTAGGAATTATAGAGAATGT+AGG | - | chr3_1:86950139-86950158 | Msa0383910:CDS | 30.0% | |
GAATTATAGAGAATGTAGGA+AGG | - | chr3_1:86950143-86950162 | Msa0383910:CDS | 30.0% | |
TCGCATAATACACATAAGTT+TGG | - | chr3_1:86950222-86950241 | Msa0383910:intron | 30.0% | |
! | TTTGGTAAATGCATGTTTTG+AGG | - | chr3_1:86950240-86950259 | Msa0383910:intron | 30.0% |
! | AAGAAACATGTTTTTCTCCT+AGG | + | chr3_1:86950378-86950397 | None:intergenic | 30.0% |
AGGAGAAAAACATGTTTCTT+TGG | - | chr3_1:86950378-86950397 | Msa0383910:CDS | 30.0% | |
! | TTTGAAATACACTTATCCAC+AGG | - | chr3_1:86950475-86950494 | Msa0383910:CDS | 30.0% |
TTCATCAACATCATACAGAA+CGG | + | chr3_1:86950522-86950541 | None:intergenic | 30.0% | |
CATATATTAACCTCGACATT+TGG | + | chr3_1:86950602-86950621 | None:intergenic | 30.0% | |
CTATCATTATGAAGGGTTAA+TGG | + | chr3_1:86950687-86950706 | None:intergenic | 30.0% | |
!! | GAAAGTGCTATCATTATGAA+GGG | + | chr3_1:86950694-86950713 | None:intergenic | 30.0% |
ATCTAGAAACCAACATACTA+GGG | + | chr3_1:86950943-86950962 | None:intergenic | 30.0% | |
AATCTAGAAACCAACATACT+AGG | + | chr3_1:86950944-86950963 | None:intergenic | 30.0% | |
!! | TGTTGGTTTCTAGATTCTTT+AGG | - | chr3_1:86950948-86950967 | Msa0383910:CDS | 30.0% |
! | GTTGGTTTCTAGATTCTTTA+GGG | - | chr3_1:86950949-86950968 | Msa0383910:CDS | 30.0% |
TAAGCCTCAAAAAAGACATA+TGG | + | chr3_1:86951328-86951347 | None:intergenic | 30.0% | |
!! | ATGCTGATGATTTACTTTTG+TGG | - | chr3_1:86951383-86951402 | Msa0383910:intron | 30.0% |
ACATGAACTAAATTCAGATG+AGG | + | chr3_1:86951474-86951493 | None:intergenic | 30.0% | |
GAAACATAAATTTCCATTCC+CGG | + | chr3_1:86951808-86951827 | None:intergenic | 30.0% | |
TACAAAAAGCTTGCCAAATT+GGG | - | chr3_1:86952477-86952496 | Msa0383910:intron | 30.0% | |
ACAAAGCTTGTAATTTCACA+AGG | - | chr3_1:86952533-86952552 | Msa0383910:intron | 30.0% | |
CAAAGCTTGTAATTTCACAA+GGG | - | chr3_1:86952534-86952553 | Msa0383910:intron | 30.0% | |
GATGGAAGTGAAAAATAAAC+TGG | - | chr3_1:86952654-86952673 | Msa0383910:intron | 30.0% | |
!! | GAGAGTATTTCAAAATATGG+TGG | - | chr3_1:86952757-86952776 | Msa0383910:intron | 30.0% |
TAACAAGTTATAACAAGGGA+GGG | + | chr3_1:86952944-86952963 | None:intergenic | 30.0% | |
TTAACAAGTTATAACAAGGG+AGG | + | chr3_1:86952945-86952964 | None:intergenic | 30.0% | |
! | TTTTCTCTTCCTATCTTGTT+GGG | - | chr3_1:86953003-86953022 | Msa0383910:intron | 30.0% |
CAAATTATCTTGAAGCAAGA+GGG | + | chr3_1:86953059-86953078 | None:intergenic | 30.0% | |
AATTTGGCTATCAATTTCCA+TGG | - | chr3_1:86953073-86953092 | Msa0383910:intron | 30.0% | |
TTCATAATCAAGTTTCTGAC+CGG | - | chr3_1:86953105-86953124 | Msa0383910:intron | 30.0% | |
!!! | ATTAAGGTTTTGGAGAGTTT+TGG | - | chr3_1:86953594-86953613 | Msa0383910:intron | 30.0% |
GCCCTATTGTATATAAAACA+TGG | - | chr3_1:86953676-86953695 | Msa0383910:CDS | 30.0% | |
! | GCCCATGTTTTATATACAAT+AGG | + | chr3_1:86953681-86953700 | None:intergenic | 30.0% |
! | ATATAGTCTTTTCAGCTAAG+TGG | - | chr3_1:86953838-86953857 | Msa0383910:five_prime_UTR | 30.0% |
!!! | GTTGAAACAGATATTTTTGG+CGG | - | chr3_1:86953876-86953895 | Msa0383910:five_prime_UTR | 30.0% |
AAAAAGGAAAAGGAAGAGAC+AGG | - | chr3_1:86947528-86947547 | Msa0383910:three_prime_UTR | 35.0% | |
! | TTATTCCAAACGCGTTTTTG+GGG | + | chr3_1:86947659-86947678 | None:intergenic | 35.0% |
! | GATTATTCCAAACGCGTTTT+TGG | + | chr3_1:86947661-86947680 | None:intergenic | 35.0% |
! | GATTGTTCAAGTTTGGAGAT+GGG | + | chr3_1:86947683-86947702 | None:intergenic | 35.0% |
! | TGATTGTTCAAGTTTGGAGA+TGG | + | chr3_1:86947684-86947703 | None:intergenic | 35.0% |
ACAAAACCTATCTCAATTGC+TGG | - | chr3_1:86947804-86947823 | Msa0383910:three_prime_UTR | 35.0% | |
TCTCAATCGTAACACTGAAT+TGG | - | chr3_1:86947842-86947861 | Msa0383910:three_prime_UTR | 35.0% | |
ATAGAAGCAATGTGAAAGCA+TGG | + | chr3_1:86947897-86947916 | None:intergenic | 35.0% | |
!!! | TTCAGTTTTTGGTTGATTCG+GGG | - | chr3_1:86947958-86947977 | Msa0383910:three_prime_UTR | 35.0% |
AGAAATAAGTGACCTGATCA+AGG | + | chr3_1:86948034-86948053 | None:intergenic | 35.0% | |
CGATAGATTAATGCTTGTTC+AGG | - | chr3_1:86948472-86948491 | Msa0383910:intron | 35.0% | |
!! | AATGCCGTCATTTTCACTTT+TGG | - | chr3_1:86948718-86948737 | Msa0383910:intron | 35.0% |
AGAGCCAAAAGTGAAAATGA+CGG | + | chr3_1:86948725-86948744 | None:intergenic | 35.0% | |
! | TTTTCACAATATGCAAGCAC+TGG | + | chr3_1:86948790-86948809 | None:intergenic | 35.0% |
TAATGGTAGGAACTTAAAGC+AGG | - | chr3_1:86948924-86948943 | Msa0383910:CDS | 35.0% | |
ATAATAATACCACCTCTCAC+GGG | - | chr3_1:86949027-86949046 | Msa0383910:CDS | 35.0% | |
TTGTTGGAAATAAACTCACC+AGG | + | chr3_1:86949077-86949096 | None:intergenic | 35.0% | |
GAGGTCTGTAGAGTTTATAA+AGG | + | chr3_1:86949100-86949119 | None:intergenic | 35.0% | |
CAAGAATGCACTAACCAAAA+TGG | + | chr3_1:86949325-86949344 | None:intergenic | 35.0% | |
TTTGGTTAGTGCATTCTTGT+AGG | - | chr3_1:86949326-86949345 | Msa0383910:CDS | 35.0% | |
GTGGTTGTTCTATAAGTGTT+CGG | - | chr3_1:86949487-86949506 | Msa0383910:CDS | 35.0% | |
TAAGCATATTTGCAGGTTCA+TGG | - | chr3_1:86949527-86949546 | Msa0383910:CDS | 35.0% | |
TATCACCTCTCGATTTACAT+AGG | + | chr3_1:86949591-86949610 | None:intergenic | 35.0% | |
CCTCCATTTAGTAAAATCCT+CGG | - | chr3_1:86949631-86949650 | Msa0383910:CDS | 35.0% | |
! | ATGCCGAGGATTTTACTAAA+TGG | + | chr3_1:86949637-86949656 | None:intergenic | 35.0% |
CTAAAATATAACTGATGCCG+AGG | + | chr3_1:86949651-86949670 | None:intergenic | 35.0% | |
TAACTTCTTCCATTTCAGCA+AGG | + | chr3_1:86949723-86949742 | None:intergenic | 35.0% | |
!! | AAGTTTGGTTCTTATTCAGC+AGG | - | chr3_1:86949855-86949874 | Msa0383910:CDS | 35.0% |
!! | AGTTTGGTTCTTATTCAGCA+GGG | - | chr3_1:86949856-86949875 | Msa0383910:CDS | 35.0% |
TCTCTTGGGTGAAGAATTTA+GGG | - | chr3_1:86949919-86949938 | Msa0383910:intron | 35.0% | |
AATTCAAGCATGCCAAAAAC+AGG | + | chr3_1:86950063-86950082 | None:intergenic | 35.0% | |
TGCTATATAGCATGTCTTCT+AGG | - | chr3_1:86950121-86950140 | Msa0383910:CDS | 35.0% | |
GCAGCACACTAATCTAATAT+AGG | + | chr3_1:86950196-86950215 | None:intergenic | 35.0% | |
TATGTGTATTATGCGAACGT+TGG | + | chr3_1:86950218-86950237 | None:intergenic | 35.0% | |
CAAACTGTTCGAAGTCTTAA+TGG | - | chr3_1:86950542-86950561 | Msa0383910:CDS | 35.0% | |
! | TAAACTTGTTCCAAATGTCG+AGG | - | chr3_1:86950589-86950608 | Msa0383910:CDS | 35.0% |
!! | CGAAAGTGCTATCATTATGA+AGG | + | chr3_1:86950695-86950714 | None:intergenic | 35.0% |
AACATAAATGCTCATGCCAT+TGG | + | chr3_1:86950813-86950832 | None:intergenic | 35.0% | |
TCGAAATGAGGTAACAAAGA+TGG | + | chr3_1:86950837-86950856 | None:intergenic | 35.0% | |
TACCTCATTTCGATGTGTTT+AGG | - | chr3_1:86950844-86950863 | Msa0383910:intron | 35.0% | |
AACCTAAACACATCGAAATG+AGG | + | chr3_1:86950849-86950868 | None:intergenic | 35.0% | |
! | TTTCGATGTGTTTAGGTTAC+TGG | - | chr3_1:86950851-86950870 | Msa0383910:intron | 35.0% |
ATTCCTTGGAGGAGTAAATT+GGG | - | chr3_1:86950874-86950893 | Msa0383910:intron | 35.0% | |
ACATACTAGGGATTGCATTA+GGG | + | chr3_1:86950931-86950950 | None:intergenic | 35.0% | |
AACATACTAGGGATTGCATT+AGG | + | chr3_1:86950932-86950951 | None:intergenic | 35.0% | |
TAATGCAATCCCTAGTATGT+TGG | - | chr3_1:86950931-86950950 | Msa0383910:CDS | 35.0% | |
ACGAACTGCATTTACCTATA+TGG | - | chr3_1:86951026-86951045 | Msa0383910:intron | 35.0% | |
CGAACTGCATTTACCTATAT+GGG | - | chr3_1:86951027-86951046 | Msa0383910:intron | 35.0% | |
TTGAGCTTAACAAATCACAG+TGG | - | chr3_1:86951287-86951306 | Msa0383910:intron | 35.0% | |
!!! | TCAGCCATATGTCTTTTTTG+AGG | - | chr3_1:86951321-86951340 | Msa0383910:intron | 35.0% |
!! | GATGATTTACTTTTGTGGAG+AGG | - | chr3_1:86951388-86951407 | Msa0383910:intron | 35.0% |
!! | ATTTACTTTTGTGGAGAGGT+TGG | - | chr3_1:86951392-86951411 | Msa0383910:intron | 35.0% |
!! | TTTACTTTTGTGGAGAGGTT+GGG | - | chr3_1:86951393-86951412 | Msa0383910:intron | 35.0% |
CATACAAAACTGTACCTTCA+AGG | + | chr3_1:86951443-86951462 | None:intergenic | 35.0% | |
!! | TGAAGGTACAGTTTTGTATG+AGG | - | chr3_1:86951443-86951462 | Msa0383910:intron | 35.0% |
TATGTATGTATACTGGAAGC+CGG | - | chr3_1:86951786-86951805 | Msa0383910:CDS | 35.0% | |
CATCTGGAAAAACAAATGCA+GGG | + | chr3_1:86951852-86951871 | None:intergenic | 35.0% | |
GCTTAACATCCATCATTTCA+GGG | + | chr3_1:86951996-86952015 | None:intergenic | 35.0% | |
AGTTGTACTAGTAAATTGGG+TGG | - | chr3_1:86952078-86952097 | Msa0383910:intron | 35.0% | |
ATACACTCGATACTCATTTG+AGG | + | chr3_1:86952108-86952127 | None:intergenic | 35.0% | |
!! | ATGAGTATCGAGTGTATTGA+AGG | - | chr3_1:86952111-86952130 | Msa0383910:intron | 35.0% |
!! | TGAGTATCGAGTGTATTGAA+GGG | - | chr3_1:86952112-86952131 | Msa0383910:intron | 35.0% |
CTTGATTTCACAATTGCTGT+CGG | + | chr3_1:86952169-86952188 | None:intergenic | 35.0% | |
TGTGAAATCAAGTCATCTGA+TGG | - | chr3_1:86952177-86952196 | Msa0383910:intron | 35.0% | |
! | GACTTTAGAAGTTCAGAATG+AGG | - | chr3_1:86952293-86952312 | Msa0383910:intron | 35.0% |
TGGACACCAACTTCTAATTA+AGG | + | chr3_1:86952383-86952402 | None:intergenic | 35.0% | |
!! | TCATTGACTCCATTCTGAAA+TGG | + | chr3_1:86952403-86952422 | None:intergenic | 35.0% |
ATTTCAGAATGGAGTCAATG+AGG | - | chr3_1:86952402-86952421 | Msa0383910:intron | 35.0% | |
!! | TGACTTTTGTTTGCTTGGAA+AGG | - | chr3_1:86952440-86952459 | Msa0383910:intron | 35.0% |
!! | GACTTTTGTTTGCTTGGAAA+GGG | - | chr3_1:86952441-86952460 | Msa0383910:intron | 35.0% |
CTACAAAAAGCTTGCCAAAT+TGG | - | chr3_1:86952476-86952495 | Msa0383910:intron | 35.0% | |
! | GAGGTGAGTTTCTTTATTTG+AGG | - | chr3_1:86952607-86952626 | Msa0383910:intron | 35.0% |
AGATTAGGAACAGTTATGGA+TGG | - | chr3_1:86952636-86952655 | Msa0383910:intron | 35.0% | |
AACAAGTTATAACAAGGGAG+GGG | + | chr3_1:86952943-86952962 | None:intergenic | 35.0% | |
AGATAGGAAGAGAAAAGGAA+CGG | + | chr3_1:86952999-86953018 | None:intergenic | 35.0% | |
CAACAAGATAGGAAGAGAAA+AGG | + | chr3_1:86953004-86953023 | None:intergenic | 35.0% | |
! | CTTTTCTCTTCCTATCTTGT+TGG | - | chr3_1:86953002-86953021 | Msa0383910:intron | 35.0% |
ATAGTAAGACCCAACAAGAT+AGG | + | chr3_1:86953015-86953034 | None:intergenic | 35.0% | |
CCAAATTATCTTGAAGCAAG+AGG | + | chr3_1:86953060-86953079 | None:intergenic | 35.0% | |
CCTCTTGCTTCAAGATAATT+TGG | - | chr3_1:86953057-86953076 | Msa0383910:intron | 35.0% | |
CTCTATACACAAAACAAGTC+AGG | + | chr3_1:86953196-86953215 | None:intergenic | 35.0% | |
!!! | GACTTGTTTTGTGTATAGAG+AGG | - | chr3_1:86953196-86953215 | Msa0383910:intron | 35.0% |
AATGAAACAAAAGGAAGGTC+TGG | + | chr3_1:86953230-86953249 | None:intergenic | 35.0% | |
! | GAGTGTATAAGTTGAAGATG+AGG | - | chr3_1:86953336-86953355 | Msa0383910:intron | 35.0% |
! | TATAAGTTGAAGATGAGGCT+AGG | - | chr3_1:86953341-86953360 | Msa0383910:intron | 35.0% |
! | TTTTTGCAGAAGCTTGTGAA+AGG | - | chr3_1:86953370-86953389 | Msa0383910:intron | 35.0% |
!!! | TTCTTTGGTTTTGGCTTTGT+AGG | - | chr3_1:86953428-86953447 | Msa0383910:intron | 35.0% |
! | GCTTTGTAGGAGGATAATTT+TGG | - | chr3_1:86953441-86953460 | Msa0383910:intron | 35.0% |
!!! | TAATTTTGGAGTGCATCTCA+TGG | - | chr3_1:86953455-86953474 | Msa0383910:intron | 35.0% |
TGCAAAATCTTATGCTACAC+TGG | - | chr3_1:86953485-86953504 | Msa0383910:CDS | 35.0% | |
GCAAAATCTTATGCTACACT+GGG | - | chr3_1:86953486-86953505 | Msa0383910:CDS | 35.0% | |
CAAAATCTTATGCTACACTG+GGG | - | chr3_1:86953487-86953506 | Msa0383910:CDS | 35.0% | |
TGAAGAGCTGATACAAACAA+TGG | - | chr3_1:86953560-86953579 | Msa0383910:intron | 35.0% | |
AATGGAGGCTAATCAGATTA+AGG | - | chr3_1:86953578-86953597 | Msa0383910:intron | 35.0% | |
! | GGCTAATCAGATTAAGGTTT+TGG | - | chr3_1:86953584-86953603 | Msa0383910:intron | 35.0% |
TACATTGATGAACAGCATGA+TGG | - | chr3_1:86953631-86953650 | Msa0383910:intron | 35.0% | |
!! | GATGGAGATGCTTTAAAATG+CGG | - | chr3_1:86953649-86953668 | Msa0383910:CDS | 35.0% |
!! | ATGATGGATGTATCAATCAC+AGG | + | chr3_1:86953801-86953820 | None:intergenic | 35.0% |
!!! | ATTTTTGGCGGCATTGAATT+TGG | - | chr3_1:86953888-86953907 | Msa0383910:five_prime_UTR | 35.0% |
!! | AAACGCGTTTTTGGGGAATT+GGG | + | chr3_1:86947652-86947671 | None:intergenic | 40.0% |
! | GGAAGCTGATTGTTCAAGTT+TGG | + | chr3_1:86947690-86947709 | None:intergenic | 40.0% |
CAATCAGCTTCCAACGATAA+TGG | - | chr3_1:86947698-86947717 | Msa0383910:three_prime_UTR | 40.0% | |
!! | TTGTTGGCTTGTTCTTGTTG+TGG | + | chr3_1:86947774-86947793 | None:intergenic | 40.0% |
GTTACGATTGAGATCAGCTT+CGG | + | chr3_1:86947835-86947854 | None:intergenic | 40.0% | |
TCGTAACACTGAATTGGAGA+AGG | - | chr3_1:86947848-86947867 | Msa0383910:three_prime_UTR | 40.0% | |
AACACTGAATTGGAGAAGGT+TGG | - | chr3_1:86947852-86947871 | Msa0383910:three_prime_UTR | 40.0% | |
AATAAGTGACCTGATCAAGG+CGG | + | chr3_1:86948031-86948050 | None:intergenic | 40.0% | |
CAATGTGACACATTGTCGAA+CGG | - | chr3_1:86948410-86948429 | Msa0383910:intron | 40.0% | |
AATGTGACACATTGTCGAAC+GGG | - | chr3_1:86948411-86948430 | Msa0383910:intron | 40.0% | |
GTGTATCGAAGAACAATGTC+AGG | - | chr3_1:86948444-86948463 | Msa0383910:intron | 40.0% | |
ATTATAGTACCGTTGGCGTT+GGG | + | chr3_1:86948517-86948536 | None:intergenic | 40.0% | |
CAACGGTACTATAATGCGAT+GGG | - | chr3_1:86948522-86948541 | Msa0383910:intron | 40.0% | |
AACGGTACTATAATGCGATG+GGG | - | chr3_1:86948523-86948542 | Msa0383910:intron | 40.0% | |
!! | TTTATTCGTGTAGTGGACTG+AGG | - | chr3_1:86948566-86948585 | Msa0383910:intron | 40.0% |
AATGCAGATCGTGAAAAGCT+GGG | - | chr3_1:86948642-86948661 | Msa0383910:intron | 40.0% | |
ACTGGAAGGATCAAGGAAAA+AGG | + | chr3_1:86948772-86948791 | None:intergenic | 40.0% | |
! | TCTCCTGATTATTTGGAGTC+TGG | - | chr3_1:86948838-86948857 | Msa0383910:intron | 40.0% |
! | CGGGACACCTGATATATTTT+TGG | - | chr3_1:86949046-86949065 | Msa0383910:CDS | 40.0% |
TTCAAAACTCTACAGACCCT+GGG | + | chr3_1:86949139-86949158 | None:intergenic | 40.0% | |
AGTCACTGTCAACAAATGAC+TGG | - | chr3_1:86949203-86949222 | Msa0383910:CDS | 40.0% | |
ACTGTCAACAAATGACTGGT+AGG | - | chr3_1:86949207-86949226 | Msa0383910:CDS | 40.0% | |
GAATGCACTAACCAAAATGG+AGG | + | chr3_1:86949322-86949341 | None:intergenic | 40.0% | |
GACATAGACACTTTGTGCAT+CGG | - | chr3_1:86949560-86949579 | Msa0383910:CDS | 40.0% | |
TCCTTCCTATGTAAATCGAG+AGG | - | chr3_1:86949583-86949602 | Msa0383910:CDS | 40.0% | |
ACCTCTCGATTTACATAGGA+AGG | + | chr3_1:86949587-86949606 | None:intergenic | 40.0% | |
! | CCGAGGATTTTACTAAATGG+AGG | + | chr3_1:86949634-86949653 | None:intergenic | 40.0% |
GTCTCTTGGGTGAAGAATTT+AGG | - | chr3_1:86949918-86949937 | Msa0383910:intron | 40.0% | |
! | TTGAGTTTTCTTGGGGTGTA+TGG | - | chr3_1:86949976-86949995 | Msa0383910:intron | 40.0% |
CAGTACACAGAATGAAGACA+TGG | + | chr3_1:86950014-86950033 | None:intergenic | 40.0% | |
TAAGAATTTGATCCGCCACT+CGG | + | chr3_1:86950571-86950590 | None:intergenic | 40.0% | |
!!! | AAGTTTTGGGCTAAAAGACG+TGG | - | chr3_1:86950734-86950753 | Msa0383910:intron | 40.0% |
! | GTTTAGGTTACTGGATTCCT+TGG | - | chr3_1:86950860-86950879 | Msa0383910:intron | 40.0% |
GATTCCTTGGAGGAGTAAAT+TGG | - | chr3_1:86950873-86950892 | Msa0383910:intron | 40.0% | |
!! | TCTTTAGGGTCTATTCACAG+TGG | - | chr3_1:86950963-86950982 | Msa0383910:CDS | 40.0% |
CTATAGGGCATAGCATTACA+GGG | + | chr3_1:86951000-86951019 | None:intergenic | 40.0% | |
TCTATAGGGCATAGCATTAC+AGG | + | chr3_1:86951001-86951020 | None:intergenic | 40.0% | |
GCAGTTCGTTCTCTTCTATA+GGG | + | chr3_1:86951015-86951034 | None:intergenic | 40.0% | |
TGCAGTTCGTTCTCTTCTAT+AGG | + | chr3_1:86951016-86951035 | None:intergenic | 40.0% | |
TAATGTGATACCTGTCCCTA+TGG | + | chr3_1:86951066-86951085 | None:intergenic | 40.0% | |
GGGTATGCAGGAGTAATTAT+TGG | + | chr3_1:86951091-86951110 | None:intergenic | 40.0% | |
TGTAGCTGGAATTCATGCAA+GGG | + | chr3_1:86951111-86951130 | None:intergenic | 40.0% | |
TTGTAGCTGGAATTCATGCA+AGG | + | chr3_1:86951112-86951131 | None:intergenic | 40.0% | |
AAGCACTCTTCGTGTTATGA+TGG | - | chr3_1:86951141-86951160 | Msa0383910:intron | 40.0% | |
! | ATGATGGAACAGTTCTGCTA+TGG | - | chr3_1:86951157-86951176 | Msa0383910:intron | 40.0% |
TAGTTCATGTCTCATGTCTG+CGG | - | chr3_1:86951484-86951503 | Msa0383910:intron | 40.0% | |
AGATAGAGCGAGATACAAGT+GGG | - | chr3_1:86951599-86951618 | Msa0383910:intron | 40.0% | |
TCTGCATACTCATGTGGATA+AGG | + | chr3_1:86951640-86951659 | None:intergenic | 40.0% | |
AAAAATGCAGAATGCGCACA+AGG | + | chr3_1:86951673-86951692 | None:intergenic | 40.0% | |
! | TGCGCATTCTGCATTTTTCA+TGG | - | chr3_1:86951675-86951694 | Msa0383910:CDS | 40.0% |
! | GCGCATTCTGCATTTTTCAT+GGG | - | chr3_1:86951676-86951695 | Msa0383910:CDS | 40.0% |
ATGGGCTTGCAAAGAAAAGA+GGG | - | chr3_1:86951694-86951713 | Msa0383910:CDS | 40.0% | |
CAAAGAAAAGAGGGAGTAAG+AGG | - | chr3_1:86951703-86951722 | Msa0383910:CDS | 40.0% | |
ATGTATGTATACTGGAAGCC+GGG | - | chr3_1:86951787-86951806 | Msa0383910:CDS | 40.0% | |
CCATCTGGAAAAACAAATGC+AGG | + | chr3_1:86951853-86951872 | None:intergenic | 40.0% | |
!! | CCTGCATTTGTTTTTCCAGA+TGG | - | chr3_1:86951850-86951869 | Msa0383910:intron | 40.0% |
GAAGAAGAACCCTGAAATGA+TGG | - | chr3_1:86951984-86952003 | Msa0383910:intron | 40.0% | |
GGCTTAACATCCATCATTTC+AGG | + | chr3_1:86951997-86952016 | None:intergenic | 40.0% | |
!! | GAGTATCGAGTGTATTGAAG+GGG | - | chr3_1:86952113-86952132 | Msa0383910:intron | 40.0% |
AGTGGTACAATTACTGACGT+AGG | - | chr3_1:86952210-86952229 | Msa0383910:intron | 40.0% | |
!! | TTGTTGACTCCACTCATGAT+AGG | - | chr3_1:86952259-86952278 | Msa0383910:intron | 40.0% |
TGATTTCAGCCTATCATGAG+TGG | + | chr3_1:86952271-86952290 | None:intergenic | 40.0% | |
CTCATGATAGGCTGAAATCA+AGG | - | chr3_1:86952271-86952290 | Msa0383910:intron | 40.0% | |
TGAACCAAACAACTTCCGAA+GGG | + | chr3_1:86952351-86952370 | None:intergenic | 40.0% | |
ATGAACCAAACAACTTCCGA+AGG | + | chr3_1:86952352-86952371 | None:intergenic | 40.0% | |
! | AGTTGGTGTCCATTTCAGAA+TGG | - | chr3_1:86952391-86952410 | Msa0383910:intron | 40.0% |
!! | GGACATGACTTTTGTTTGCT+TGG | - | chr3_1:86952435-86952454 | Msa0383910:intron | 40.0% |
TTTCACAAGGGCAGAATGTA+CGG | - | chr3_1:86952546-86952565 | Msa0383910:intron | 40.0% | |
TCTGAGAGATAGTGAGAGTA+TGG | - | chr3_1:86952681-86952700 | Msa0383910:intron | 40.0% | |
! | CTGAGAGATAGTGAGAGTAT+GGG | - | chr3_1:86952682-86952701 | Msa0383910:intron | 40.0% |
CTCTCTATTCAGAACTGATC+AGG | + | chr3_1:86952740-86952759 | None:intergenic | 40.0% | |
! | TAATCTCTCTGTTTTCTCCG+TGG | - | chr3_1:86952808-86952827 | Msa0383910:CDS | 40.0% |
TGGAAACATAGCACGTATAG+TGG | + | chr3_1:86953156-86953175 | None:intergenic | 40.0% | |
AGGTTGTTAAGCACAGTTAC+TGG | + | chr3_1:86953176-86953195 | None:intergenic | 40.0% | |
GTATAGACAGATGTCAGACT+CGG | - | chr3_1:86953313-86953332 | Msa0383910:intron | 40.0% | |
TATAGACAGATGTCAGACTC+GGG | - | chr3_1:86953314-86953333 | Msa0383910:intron | 40.0% | |
!!! | TTTGGTTTTGGCTTTGTAGG+AGG | - | chr3_1:86953431-86953450 | Msa0383910:intron | 40.0% |
AGAGCTGATACAAACAATGG+AGG | - | chr3_1:86953563-86953582 | Msa0383910:intron | 40.0% | |
!!! | GGTTTTGGAGAGTTTTGGAA+TGG | - | chr3_1:86953599-86953618 | Msa0383910:intron | 40.0% |
TAACATATTTGCGTACCCAG+AGG | - | chr3_1:86953738-86953757 | Msa0383910:CDS | 40.0% | |
!! | TTTGTTGTTTGCTTGCGATG+TGG | - | chr3_1:86953768-86953787 | Msa0383910:CDS | 40.0% |
AAGGAAGAGACAGGTGTGAT+TGG | - | chr3_1:86947537-86947556 | Msa0383910:three_prime_UTR | 45.0% | |
AAGAGACAGGTGTGATTGGT+TGG | - | chr3_1:86947541-86947560 | Msa0383910:three_prime_UTR | 45.0% | |
!! | AGAAAGTCAAGGGAGCGTTT+GGG | + | chr3_1:86947620-86947639 | None:intergenic | 45.0% |
GGTTTGGAGGAGAAAGTCAA+GGG | + | chr3_1:86947630-86947649 | None:intergenic | 45.0% | |
!! | GTTTTTGGGGAATTGGGGTT+TGG | + | chr3_1:86947646-86947665 | None:intergenic | 45.0% |
!! | AACGCGTTTTTGGGGAATTG+GGG | + | chr3_1:86947651-86947670 | None:intergenic | 45.0% |
!! | CAAACGCGTTTTTGGGGAAT+TGG | + | chr3_1:86947653-86947672 | None:intergenic | 45.0% |
CAATTCCCCAAAAACGCGTT+TGG | - | chr3_1:86947651-86947670 | Msa0383910:three_prime_UTR | 45.0% | |
! | TCAGCTTCCAACGATAATGG+TGG | - | chr3_1:86947701-86947720 | Msa0383910:three_prime_UTR | 45.0% |
TCGGAAACCACCATTATCGT+TGG | + | chr3_1:86947711-86947730 | None:intergenic | 45.0% | |
!! | TTGGCTTGTTCTTGTTGTGG+CGG | + | chr3_1:86947771-86947790 | None:intergenic | 45.0% |
AGAAGCTGCAAGTAGAGAAG+AGG | - | chr3_1:86947998-86948017 | Msa0383910:CDS | 45.0% | |
CGTTCGACAATGTGTCACAT+TGG | + | chr3_1:86948412-86948431 | None:intergenic | 45.0% | |
ATGTGACACATTGTCGAACG+GGG | - | chr3_1:86948412-86948431 | Msa0383910:intron | 45.0% | |
TTATAGTACCGTTGGCGTTG+GGG | + | chr3_1:86948516-86948535 | None:intergenic | 45.0% | |
CATTATAGTACCGTTGGCGT+TGG | + | chr3_1:86948518-86948537 | None:intergenic | 45.0% | |
CCATCGCATTATAGTACCGT+TGG | + | chr3_1:86948524-86948543 | None:intergenic | 45.0% | |
CCAACGGTACTATAATGCGA+TGG | - | chr3_1:86948521-86948540 | Msa0383910:intron | 45.0% | |
GTACTATAATGCGATGGGGA+TGG | - | chr3_1:86948527-86948546 | Msa0383910:intron | 45.0% | |
! | CTTTTCACGATCTGCATTGC+AGG | + | chr3_1:86948640-86948659 | None:intergenic | 45.0% |
CAATGCAGATCGTGAAAAGC+TGG | - | chr3_1:86948641-86948660 | Msa0383910:intron | 45.0% | |
CTACACAGATCAGATGGTTG+AGG | - | chr3_1:86948690-86948709 | Msa0383910:intron | 45.0% | |
!!! | ACTTTTGGCTCTTACCGACT+AGG | - | chr3_1:86948733-86948752 | Msa0383910:intron | 45.0% |
!!! | CTTTTGGCTCTTACCGACTA+GGG | - | chr3_1:86948734-86948753 | Msa0383910:intron | 45.0% |
!!! | TTTTGGCTCTTACCGACTAG+GGG | - | chr3_1:86948735-86948754 | Msa0383910:intron | 45.0% |
!! | CACAATATGCAAGCACTGGA+AGG | + | chr3_1:86948786-86948805 | None:intergenic | 45.0% |
CCTCCAGACTCCAAATAATC+AGG | + | chr3_1:86948844-86948863 | None:intergenic | 45.0% | |
! | CCTGATTATTTGGAGTCTGG+AGG | - | chr3_1:86948841-86948860 | Msa0383910:intron | 45.0% |
TGGTAGGAACTTAAAGCAGG+AGG | - | chr3_1:86948927-86948946 | Msa0383910:CDS | 45.0% | |
CTTCAAAACTCTACAGACCC+TGG | + | chr3_1:86949140-86949159 | None:intergenic | 45.0% | |
GTCAACAAATGACTGGTAGG+CGG | - | chr3_1:86949210-86949229 | Msa0383910:CDS | 45.0% | |
CACTAACCAAAATGGAGGAG+GGG | + | chr3_1:86949317-86949336 | None:intergenic | 45.0% | |
GCACTAACCAAAATGGAGGA+GGG | + | chr3_1:86949318-86949337 | None:intergenic | 45.0% | |
TGCACTAACCAAAATGGAGG+AGG | + | chr3_1:86949319-86949338 | None:intergenic | 45.0% | |
TATTTGCAGGTTCATGGACC+TGG | - | chr3_1:86949533-86949552 | Msa0383910:CDS | 45.0% | |
! | AAAGTGTCTATGTCCACTCC+AGG | + | chr3_1:86949554-86949573 | None:intergenic | 45.0% |
GCACAACATCCTTGCTGAAA+TGG | - | chr3_1:86949711-86949730 | Msa0383910:CDS | 45.0% | |
ATTACTGGGACATGTGCATC+AGG | + | chr3_1:86949763-86949782 | None:intergenic | 45.0% | |
GGTTGTGCCAGAAGTAAGTT+TGG | - | chr3_1:86949840-86949859 | Msa0383910:CDS | 45.0% | |
TGGCATAGCGGTAACAGATA+TGG | + | chr3_1:86950335-86950354 | None:intergenic | 45.0% | |
GGCATAAATGGATGGCATAG+CGG | + | chr3_1:86950347-86950366 | None:intergenic | 45.0% | |
ATACACTTATCCACAGGACC+TGG | - | chr3_1:86950481-86950500 | Msa0383910:CDS | 45.0% | |
AAGTCTTAATGGTTGCCGAG+TGG | - | chr3_1:86950553-86950572 | Msa0383910:CDS | 45.0% | |
TAGGTTACTGGATTCCTTGG+AGG | - | chr3_1:86950863-86950882 | Msa0383910:intron | 45.0% | |
TAGCCCAATTTACTCCTCCA+AGG | + | chr3_1:86950880-86950899 | None:intergenic | 45.0% | |
GGATTGCATTAGGGTAAAGC+TGG | + | chr3_1:86950922-86950941 | None:intergenic | 45.0% | |
TTAGGGTCTATTCACAGTGG+CGG | - | chr3_1:86950966-86950985 | Msa0383910:CDS | 45.0% | |
TTTCTGCGAGGATCCCATAT+AGG | + | chr3_1:86951043-86951062 | None:intergenic | 45.0% | |
! | GAATTCATGCAAGGGTATGC+AGG | + | chr3_1:86951103-86951122 | None:intergenic | 45.0% |
! | TCAAGGTTAGCTGTCTTAGC+CGG | + | chr3_1:86951426-86951445 | None:intergenic | 45.0% |
GCTAAGACAGCTAACCTTGA+AGG | - | chr3_1:86951426-86951445 | Msa0383910:intron | 45.0% | |
CAGATAGAGCGAGATACAAG+TGG | - | chr3_1:86951598-86951617 | Msa0383910:intron | 45.0% | |
CATGGGCTTGCAAAGAAAAG+AGG | - | chr3_1:86951693-86951712 | Msa0383910:CDS | 45.0% | |
GGACAGCAGTTTGATATACG+TGG | - | chr3_1:86951733-86951752 | Msa0383910:CDS | 45.0% | |
GCCTAGGCATATAAACCATG+CGG | - | chr3_1:86951891-86951910 | Msa0383910:intron | 45.0% | |
AAACCATGCGGCTGAGAAAA+TGG | - | chr3_1:86951903-86951922 | Msa0383910:intron | 45.0% | |
AACCATGCGGCTGAGAAAAT+GGG | - | chr3_1:86951904-86951923 | Msa0383910:intron | 45.0% | |
GATACGACAAAGTGCAACTC+TGG | - | chr3_1:86951931-86951950 | Msa0383910:CDS | 45.0% | |
! | CTTCTGAAAGGTCCATCAAG+AGG | - | chr3_1:86951962-86951981 | Msa0383910:intron | 45.0% |
AGGGTTCTTCTTCCTCTTGA+TGG | + | chr3_1:86951977-86951996 | None:intergenic | 45.0% | |
AGCCAGATAAACCAGAGAAG+CGG | - | chr3_1:86952013-86952032 | Msa0383910:intron | 45.0% | |
AAACACACTCTAGCCTCTGT+GGG | + | chr3_1:86952050-86952069 | None:intergenic | 45.0% | |
TCGAGTGTATTGAAGGGGTT+AGG | - | chr3_1:86952118-86952137 | Msa0383910:intron | 45.0% | |
ATTGAAGGGGTTAGGCTAGA+TGG | - | chr3_1:86952126-86952145 | Msa0383910:intron | 45.0% | |
!! | AAGTCATCTGATGGACTCTC+AGG | - | chr3_1:86952186-86952205 | Msa0383910:intron | 45.0% |
TAAGAAGCCTGCTGAATCAG+CGG | - | chr3_1:86952316-86952335 | Msa0383910:intron | 45.0% | |
GAGTCAATGAGGACAAAGCT+CGG | - | chr3_1:86952413-86952432 | Msa0383910:intron | 45.0% | |
AGTCAATGAGGACAAAGCTC+GGG | - | chr3_1:86952414-86952433 | Msa0383910:intron | 45.0% | |
AAGCTTGCCAAATTGGGAAG+AGG | - | chr3_1:86952483-86952502 | Msa0383910:intron | 45.0% | |
AGCTTGCCAAATTGGGAAGA+GGG | - | chr3_1:86952484-86952503 | Msa0383910:intron | 45.0% | |
AGAAACTCACCTCGCAATTG+AGG | + | chr3_1:86952600-86952619 | None:intergenic | 45.0% | |
AGAGTATGGGAACTTTGCAG+AGG | - | chr3_1:86952695-86952714 | Msa0383910:intron | 45.0% | |
GAGTATGGGAACTTTGCAGA+GGG | - | chr3_1:86952696-86952715 | Msa0383910:intron | 45.0% | |
! | TTGCAGAGGGTGATGTTTTG+TGG | - | chr3_1:86952709-86952728 | Msa0383910:intron | 45.0% |
ATGGTGGCTGAAGAAGTTGA+AGG | - | chr3_1:86952773-86952792 | Msa0383910:CDS | 45.0% | |
GTTTCTGACCGGTGAATATG+TGG | - | chr3_1:86953116-86953135 | Msa0383910:intron | 45.0% | |
ACAAAAGGAAGGTCTGGTCT+CGG | + | chr3_1:86953224-86953243 | None:intergenic | 45.0% | |
!! | TGTTGCTTTGCTGAGGTACT+GGG | - | chr3_1:86953511-86953530 | Msa0383910:CDS | 45.0% |
!! | TTTGCTGAGGTACTGGGAAT+GGG | - | chr3_1:86953517-86953536 | Msa0383910:CDS | 45.0% |
ATATTTGCGTACCCAGAGGT+GGG | - | chr3_1:86953742-86953761 | Msa0383910:CDS | 45.0% | |
ACAACAAAGTTCCCACCTCT+GGG | + | chr3_1:86953756-86953775 | None:intergenic | 45.0% | |
AACAACAAAGTTCCCACCTC+TGG | + | chr3_1:86953757-86953776 | None:intergenic | 45.0% | |
TCAATCTGCAGCGATTTCGT+TGG | - | chr3_1:86953932-86953951 | Msa0383910:five_prime_UTR | 45.0% | |
!!! | TTAAAAAAATATTTTTTGAA+GGG | + | chr3_1:86948374-86948393 | None:intergenic | 5.0% |
!!! | ATTAAAAAAATATTTTTTGA+AGG | + | chr3_1:86948375-86948394 | None:intergenic | 5.0% |
! | ACAGGTGTGATTGGTTGGAG+TGG | - | chr3_1:86947546-86947565 | Msa0383910:three_prime_UTR | 50.0% |
! | CAGGTGTGATTGGTTGGAGT+GGG | - | chr3_1:86947547-86947566 | Msa0383910:three_prime_UTR | 50.0% |
!! | GAGAAAGTCAAGGGAGCGTT+TGG | + | chr3_1:86947621-86947640 | None:intergenic | 50.0% |
GGGTTTGGAGGAGAAAGTCA+AGG | + | chr3_1:86947631-86947650 | None:intergenic | 50.0% | |
TTTGGGGAATTGGGGTTTGG+AGG | + | chr3_1:86947643-86947662 | None:intergenic | 50.0% | |
GATTGAGATCAGCTTCGGTG+GGG | + | chr3_1:86947830-86947849 | None:intergenic | 50.0% | |
CGATTGAGATCAGCTTCGGT+GGG | + | chr3_1:86947831-86947850 | None:intergenic | 50.0% | |
ACGATTGAGATCAGCTTCGG+TGG | + | chr3_1:86947832-86947851 | None:intergenic | 50.0% | |
TGAGACTGATTGTGGGACAG+GGG | + | chr3_1:86948226-86948245 | None:intergenic | 50.0% | |
GTGAGACTGATTGTGGGACA+GGG | + | chr3_1:86948227-86948246 | None:intergenic | 50.0% | |
TGTGAGACTGATTGTGGGAC+AGG | + | chr3_1:86948228-86948247 | None:intergenic | 50.0% | |
TTCTTCAACCCCAACGCCAA+CGG | - | chr3_1:86948505-86948524 | Msa0383910:intron | 50.0% | |
TCTGATCTGTGTAGCCTCGT+TGG | + | chr3_1:86948684-86948703 | None:intergenic | 50.0% | |
ACGAGGCTACACAGATCAGA+TGG | - | chr3_1:86948684-86948703 | Msa0383910:intron | 50.0% | |
GTAACAGACTCACCCCTAGT+CGG | + | chr3_1:86948750-86948769 | None:intergenic | 50.0% | |
!! | TGCAAGCACTGGAAGGATCA+AGG | + | chr3_1:86948779-86948798 | None:intergenic | 50.0% |
TATATCAGGTGTCCCGTGAG+AGG | + | chr3_1:86949042-86949061 | None:intergenic | 50.0% | |
AACCAAAATGGAGGAGGGGA+GGG | + | chr3_1:86949313-86949332 | None:intergenic | 50.0% | |
TAACCAAAATGGAGGAGGGG+AGG | + | chr3_1:86949314-86949333 | None:intergenic | 50.0% | |
GAGAGGTGATATACTGCAGC+TGG | - | chr3_1:86949600-86949619 | Msa0383910:CDS | 50.0% | |
!! | CATGTATAGTGGGTGTCGAG+GGG | + | chr3_1:86950103-86950122 | None:intergenic | 50.0% |
!! | GCATGTATAGTGGGTGTCGA+GGG | + | chr3_1:86950104-86950123 | None:intergenic | 50.0% |
!! | AGCATGTATAGTGGGTGTCG+AGG | + | chr3_1:86950105-86950124 | None:intergenic | 50.0% |
! | TCTGAGATATCCAGGTCCTG+TGG | + | chr3_1:86950494-86950513 | None:intergenic | 50.0% |
CAGGACCTGGATATCTCAGA+CGG | - | chr3_1:86950494-86950513 | Msa0383910:CDS | 50.0% | |
TCTTAATGGTTGCCGAGTGG+CGG | - | chr3_1:86950556-86950575 | Msa0383910:CDS | 50.0% | |
GGGCATAGCATTACAGGGTT+TGG | + | chr3_1:86950995-86951014 | None:intergenic | 50.0% | |
GGATCCTCGCAGAAACCATA+GGG | - | chr3_1:86951048-86951067 | Msa0383910:intron | 50.0% | |
GCTTGTCGAGACATTGTAGC+TGG | + | chr3_1:86951125-86951144 | None:intergenic | 50.0% | |
! | CAAGGTTAGCTGTCTTAGCC+GGG | + | chr3_1:86951425-86951444 | None:intergenic | 50.0% |
GACGTGTCTGCATACTCATG+TGG | + | chr3_1:86951646-86951665 | None:intergenic | 50.0% | |
AGAGGGAGTAAGAGGTCAAG+AGG | - | chr3_1:86951711-86951730 | Msa0383910:CDS | 50.0% | |
GAGGGAGTAAGAGGTCAAGA+GGG | - | chr3_1:86951712-86951731 | Msa0383910:CDS | 50.0% | |
TGTATACTGGAAGCCGGGAA+TGG | - | chr3_1:86951792-86951811 | Msa0383910:CDS | 50.0% | |
CGAGTGCGTTTGTAACCATC+TGG | + | chr3_1:86951868-86951887 | None:intergenic | 50.0% | |
ACAAACGCACTCGAATGCCT+AGG | - | chr3_1:86951875-86951894 | Msa0383910:intron | 50.0% | |
GCCGCATGGTTTATATGCCT+AGG | + | chr3_1:86951895-86951914 | None:intergenic | 50.0% | |
CTGGATCCAGCTCTTCTGAA+AGG | - | chr3_1:86951950-86951969 | Msa0383910:CDS | 50.0% | |
GATGGACCTTTCAGAAGAGC+TGG | + | chr3_1:86951959-86951978 | None:intergenic | 50.0% | |
! | GTCCGCTTCTCTGGTTTATC+TGG | + | chr3_1:86952018-86952037 | None:intergenic | 50.0% |
CTAACAGATGTCCGCTTCTC+TGG | + | chr3_1:86952027-86952046 | None:intergenic | 50.0% | |
GAAACACACTCTAGCCTCTG+TGG | + | chr3_1:86952051-86952070 | None:intergenic | 50.0% | |
!! | TCTGATGGACTCTCAGGAAG+TGG | - | chr3_1:86952192-86952211 | Msa0383910:intron | 50.0% |
AAGAAGCCTGCTGAATCAGC+GGG | - | chr3_1:86952317-86952336 | Msa0383910:intron | 50.0% | |
CCAAACAACTTCCGAAGGGA+AGG | + | chr3_1:86952347-86952366 | None:intergenic | 50.0% | |
CCTTCCCTTCGGAAGTTGTT+TGG | - | chr3_1:86952344-86952363 | Msa0383910:intron | 50.0% | |
ACAGCACCCTCTTCCCAATT+TGG | + | chr3_1:86952493-86952512 | None:intergenic | 50.0% | |
CACCTCGCAATTGAGGTTCT+GGG | + | chr3_1:86952593-86952612 | None:intergenic | 50.0% | |
TCACCTCGCAATTGAGGTTC+TGG | + | chr3_1:86952594-86952613 | None:intergenic | 50.0% | |
ACCTGCGACCACATATTCAC+CGG | + | chr3_1:86953127-86953146 | None:intergenic | 50.0% | |
!! | CTGTTGCTTTGCTGAGGTAC+TGG | - | chr3_1:86953510-86953529 | Msa0383910:CDS | 50.0% |
!! | CTTTGCTGAGGTACTGGGAA+TGG | - | chr3_1:86953516-86953535 | Msa0383910:CDS | 50.0% |
CATATTTGCGTACCCAGAGG+TGG | - | chr3_1:86953741-86953760 | Msa0383910:CDS | 50.0% | |
GTTTGCTTGCGATGTGGATG+TGG | - | chr3_1:86953774-86953793 | Msa0383910:CDS | 50.0% | |
GTGGTTTCCGACAGCCCTAA+CGG | - | chr3_1:86947720-86947739 | Msa0383910:three_prime_UTR | 55.0% | |
GAGGTGTAGAGCCACCGTTA+GGG | + | chr3_1:86947737-86947756 | None:intergenic | 55.0% | |
! | TTGTTCTTGTTGTGGCGGCG+GGG | + | chr3_1:86947766-86947785 | None:intergenic | 55.0% |
! | CTTGTTCTTGTTGTGGCGGC+GGG | + | chr3_1:86947767-86947786 | None:intergenic | 55.0% |
! | GCTTGTTCTTGTTGTGGCGG+CGG | + | chr3_1:86947768-86947787 | None:intergenic | 55.0% |
GTGGGGCCAGCAATTGAGAT+AGG | + | chr3_1:86947813-86947832 | None:intergenic | 55.0% | |
GAGACTGATTGTGGGACAGG+GGG | + | chr3_1:86948225-86948244 | None:intergenic | 55.0% | |
TGACACATTGTCGAACGGGG+TGG | - | chr3_1:86948415-86948434 | Msa0383910:intron | 55.0% | |
GACACATTGTCGAACGGGGT+GGG | - | chr3_1:86948416-86948435 | Msa0383910:intron | 55.0% | |
ACACATTGTCGAACGGGGTG+GGG | - | chr3_1:86948417-86948436 | Msa0383910:intron | 55.0% | |
ATCTGTGTAGCCTCGTTGGC+GGG | + | chr3_1:86948680-86948699 | None:intergenic | 55.0% | |
GATCTGTGTAGCCTCGTTGG+CGG | + | chr3_1:86948681-86948700 | None:intergenic | 55.0% | |
! | TTCCCTCCCCTCCTCCATTT+TGG | - | chr3_1:86949308-86949327 | Msa0383910:CDS | 55.0% |
GGGACATGTGCATCAGGTAC+TGG | + | chr3_1:86949757-86949776 | None:intergenic | 55.0% | |
! | CGGAACCGTCTGAGATATCC+AGG | + | chr3_1:86950502-86950521 | None:intergenic | 55.0% |
GGGATCCTCGCAGAAACCAT+AGG | - | chr3_1:86951047-86951066 | Msa0383910:intron | 55.0% | |
CTGTCCCTATGGTTTCTGCG+AGG | + | chr3_1:86951055-86951074 | None:intergenic | 55.0% | |
CTCGCAGAAACCATAGGGAC+AGG | - | chr3_1:86951053-86951072 | Msa0383910:intron | 55.0% | |
GGAGAGGTTGGGTAGAATCC+CGG | - | chr3_1:86951404-86951423 | Msa0383910:intron | 55.0% | |
TGCAGAATGCGCACAAGGCT+TGG | + | chr3_1:86951668-86951687 | None:intergenic | 55.0% | |
! | CACCCATTTTCTCAGCCGCA+TGG | + | chr3_1:86951909-86951928 | None:intergenic | 55.0% |
GGACATCTGTTAGCCCACAG+AGG | - | chr3_1:86952034-86952053 | Msa0383910:intron | 55.0% | |
!! | AGGTTCTGGGTGCTGGCAAT+TGG | + | chr3_1:86952580-86952599 | None:intergenic | 55.0% |
!! | GCAATTGAGGTTCTGGGTGC+TGG | + | chr3_1:86952587-86952606 | None:intergenic | 55.0% |
CACCCAGAACCTCAATTGCG+AGG | - | chr3_1:86952588-86952607 | Msa0383910:intron | 55.0% | |
ACCGGTGAATATGTGGTCGC+AGG | - | chr3_1:86953123-86953142 | Msa0383910:intron | 55.0% | |
!! | GAGGTACTGGGAATGGGCAA+AGG | - | chr3_1:86953523-86953542 | Msa0383910:CDS | 55.0% |
GTTTCCGACAGCCCTAACGG+TGG | - | chr3_1:86947723-86947742 | Msa0383910:three_prime_UTR | 60.0% | |
AGAGCCACCGTTAGGGCTGT+CGG | + | chr3_1:86947730-86947749 | None:intergenic | 60.0% | |
! | GGAGGTGTAGAGCCACCGTT+AGG | + | chr3_1:86947738-86947757 | None:intergenic | 60.0% |
! | TGTTCTTGTTGTGGCGGCGG+GGG | + | chr3_1:86947765-86947784 | None:intergenic | 60.0% |
GGTTCTTCGCCGCCTTGATC+AGG | - | chr3_1:86948019-86948038 | Msa0383910:CDS | 60.0% | |
CACATTGTCGAACGGGGTGG+GGG | - | chr3_1:86948418-86948437 | Msa0383910:intron | 60.0% | |
ATCAGGTGTCCCGTGAGAGG+TGG | + | chr3_1:86949039-86949058 | None:intergenic | 60.0% | |
GCAGGTTCATGGACCTGGAG+TGG | - | chr3_1:86949538-86949557 | Msa0383910:CDS | 60.0% | |
GGGTCTATTCACAGTGGCGG+TGG | - | chr3_1:86950969-86950988 | Msa0383910:CDS | 60.0% | |
!! | GGTTCTCCCGCTGATTCAGC+AGG | + | chr3_1:86952326-86952345 | None:intergenic | 60.0% |
CAGCGGGAGAACCTTCCCTT+CGG | - | chr3_1:86952333-86952352 | Msa0383910:intron | 60.0% | |
!! | CTGGGGCTGTTGCTTTGCTG+AGG | - | chr3_1:86953504-86953523 | Msa0383910:CDS | 60.0% |
ATTGTCGAACGGGGTGGGGG+TGG | - | chr3_1:86948421-86948440 | Msa0383910:intron | 65.0% | |
TTGTCGAACGGGGTGGGGGT+GGG | - | chr3_1:86948422-86948441 | Msa0383910:intron | 65.0% | |
AAGCAGCTGACCCGCCAACG+AGG | - | chr3_1:86948667-86948686 | Msa0383910:intron | 65.0% | |
TGTTGTGGCGGCGGGGGAAG+CGG | + | chr3_1:86947759-86947778 | None:intergenic | 70.0% | |
! | TGTGGCGGCGGGGGAAGCGG+AGG | + | chr3_1:86947756-86947775 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 86947526 | 86953989 | 86947526 | ID=Msa0383910;Name=Msa0383910 |
chr3_1 | mRNA | 86947526 | 86953989 | 86947526 | ID=Msa0383910-mRNA-1;Parent=Msa0383910;Name=Msa0383910-mRNA-1;_AED=0.19;_eAED=0.19;_QI=191|0.8|1|1|1|1|11|465|720 |
chr3_1 | exon | 86947526 | 86948065 | 86947526 | ID=Msa0383910-mRNA-1:exon:23166;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86948906 | 86949106 | 86948906 | ID=Msa0383910-mRNA-1:exon:23165;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86949201 | 86949914 | 86949201 | ID=Msa0383910-mRNA-1:exon:23164;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86950068 | 86950232 | 86950068 | ID=Msa0383910-mRNA-1:exon:23163;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86950320 | 86950649 | 86950320 | ID=Msa0383910-mRNA-1:exon:23162;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86950905 | 86951018 | 86950905 | ID=Msa0383910-mRNA-1:exon:23161;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86951663 | 86951824 | 86951663 | ID=Msa0383910-mRNA-1:exon:23160;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86951911 | 86951973 | 86951911 | ID=Msa0383910-mRNA-1:exon:23159;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86952759 | 86952866 | 86952759 | ID=Msa0383910-mRNA-1:exon:23158;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86953475 | 86953552 | 86953475 | ID=Msa0383910-mRNA-1:exon:23157;Parent=Msa0383910-mRNA-1 |
chr3_1 | exon | 86953646 | 86953989 | 86953646 | ID=Msa0383910-mRNA-1:exon:23156;Parent=Msa0383910-mRNA-1 |
chr3_1 | five_prime_UTR | 86953799 | 86953989 | 86953799 | ID=Msa0383910-mRNA-1:five_prime_utr;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86953646 | 86953798 | 86953646 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86953475 | 86953552 | 86953475 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86952759 | 86952866 | 86952759 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86951911 | 86951973 | 86951911 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86951663 | 86951824 | 86951663 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86950905 | 86951018 | 86950905 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86950320 | 86950649 | 86950320 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86950068 | 86950232 | 86950068 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86949201 | 86949914 | 86949201 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86948906 | 86949106 | 86948906 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | CDS | 86947991 | 86948065 | 86947991 | ID=Msa0383910-mRNA-1:cds;Parent=Msa0383910-mRNA-1 |
chr3_1 | three_prime_UTR | 86947526 | 86947990 | 86947526 | ID=Msa0383910-mRNA-1:three_prime_utr;Parent=Msa0383910-mRNA-1 |
Gene Sequence |
Protein sequence |