Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522160 | KEH36093.1 | 97.507 | 722 | 15 | 1 | 1 | 722 | 1 | 719 | 0.0 | 1478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522160 | sp|Q8VYW1|PAPS4_ARATH | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522160 | A0A072V3Z3 | 97.507 | 722 | 15 | 1 | 1 | 722 | 1 | 719 | 0.0 | 1478 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0186230 | Msa0522160 | 0.852716 | 3.847013e-61 | -8.615850e-47 |
| Msa0383910 | Msa0522160 | 0.919872 | 2.613917e-87 | -8.615850e-47 |
| Msa0434390 | Msa0522160 | 0.836118 | 1.128635e-56 | -8.615850e-47 |
| Msa0478090 | Msa0522160 | 0.923846 | 1.548814e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522160 | MtrunA17_Chr3g0140561 | 97.507 | 722 | 15 | 1 | 1 | 722 | 1 | 719 | 0.0 | 1478 |
| Msa0522160 | MtrunA17_Chr8g0340751 | 70.423 | 568 | 158 | 4 | 3 | 570 | 9 | 566 | 0.0 | 835 |
| Msa0522160 | MtrunA17_Chr6g0483461 | 63.480 | 523 | 183 | 4 | 18 | 537 | 4 | 521 | 0.0 | 721 |
| Msa0522160 | MtrunA17_Chr8g0392531 | 63.654 | 509 | 180 | 3 | 29 | 537 | 19 | 522 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522160 | AT4G32850.9 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 917 |
| Msa0522160 | AT4G32850.5 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 917 |
| Msa0522160 | AT4G32850.6 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 916 |
| Msa0522160 | AT4G32850.2 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 916 |
| Msa0522160 | AT4G32850.3 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 915 |
| Msa0522160 | AT4G32850.1 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 915 |
| Msa0522160 | AT4G32850.10 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 915 |
| Msa0522160 | AT4G32850.8 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 915 |
| Msa0522160 | AT4G32850.7 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 915 |
| Msa0522160 | AT4G32850.13 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 914 |
| Msa0522160 | AT4G32850.15 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 914 |
| Msa0522160 | AT4G32850.16 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 914 |
| Msa0522160 | AT4G32850.4 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 914 |
| Msa0522160 | AT4G32850.17 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 914 |
| Msa0522160 | AT4G32850.14 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 914 |
| Msa0522160 | AT4G32850.12 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 914 |
| Msa0522160 | AT4G32850.11 | 70.142 | 633 | 172 | 4 | 1 | 627 | 1 | 622 | 0.0 | 914 |
| Msa0522160 | AT2G25850.3 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 899 |
| Msa0522160 | AT2G25850.1 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 899 |
| Msa0522160 | AT2G25850.4 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 898 |
| Msa0522160 | AT2G25850.2 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 897 |
| Msa0522160 | AT2G25850.6 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 896 |
| Msa0522160 | AT2G25850.7 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 896 |
| Msa0522160 | AT2G25850.8 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 896 |
| Msa0522160 | AT2G25850.5 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 896 |
| Msa0522160 | AT2G25850.9 | 73.264 | 576 | 150 | 2 | 29 | 604 | 25 | 596 | 0.0 | 895 |
| Msa0522160 | AT1G17980.1 | 64.948 | 485 | 166 | 3 | 23 | 505 | 5 | 487 | 0.0 | 687 |
| Msa0522160 | AT1G17980.2 | 66.575 | 362 | 119 | 2 | 144 | 505 | 1 | 360 | 0.0 | 537 |
| Msa0522160 | AT3G06560.1 | 36.283 | 452 | 260 | 8 | 49 | 496 | 21 | 448 | 8.94e-85 | 278 |
Find 224 sgRNAs with CRISPR-Local
Find 503 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTAACATCCATCATTTC+AGG | 0.158083 | 3_4:-75233126 | None:intergenic |
| CAAACTGTTCGAAGTCTTAA+TGG | 0.168443 | 3_4:+75231676 | Msa0522160:CDS |
| CATTGAGATGTTTAAAGTTT+TGG | 0.183316 | 3_4:+75231854 | Msa0522160:CDS |
| AAACCATGCGGCTGAGAAAA+TGG | 0.183581 | 3_4:+75233035 | Msa0522160:CDS |
| GTATGCAAGCATATCTATTT+TGG | 0.195681 | 3_4:+75230949 | Msa0522160:CDS |
| TTTCGATGTGTTTAGGTTAC+TGG | 0.209043 | 3_4:+75231985 | Msa0522160:intron |
| TGTTGGTTTCTAGATTCTTT+AGG | 0.216571 | 3_4:+75232082 | Msa0522160:CDS |
| GATTCCTTGGAGGAGTAAAT+TGG | 0.220082 | 3_4:+75232007 | Msa0522160:CDS |
| TGAAAGTTGTACTAGTAAAT+TGG | 0.221124 | 3_4:+75233206 | Msa0522160:CDS |
| GTTGGTTTCTAGATTCTTTA+GGG | 0.224014 | 3_4:+75232083 | Msa0522160:CDS |
| GGCTAATCAGATTAAGGTTT+TGG | 0.224463 | 3_4:+75234716 | Msa0522160:three_prime_UTR |
| GTCCGCTTCTCTGGTTTATC+TGG | 0.228167 | 3_4:-75233147 | None:intergenic |
| ACAGCACCCTCTTCCCAATT+TGG | 0.235857 | 3_4:-75233622 | None:intergenic |
| GCTTTGTAGGAGGATAATTT+TGG | 0.238055 | 3_4:+75234573 | Msa0522160:intron |
| TCTATAGGGCATAGCATTAC+AGG | 0.238894 | 3_4:-75232132 | None:intergenic |
| CTGTTGCTTTGCTGAGGTAC+TGG | 0.247333 | 3_4:+75234642 | Msa0522160:exon |
| AGGGTTCTTCTTCCTCTTGA+TGG | 0.251063 | 3_4:-75233106 | None:intergenic |
| TCACCTCGCAATTGAGGTTC+TGG | 0.263013 | 3_4:-75233723 | None:intergenic |
| ACGAACTGCATTTACCTATA+TGG | 0.264976 | 3_4:+75232160 | Msa0522160:CDS |
| CTTGTTCTTGTTGTGGCGGC+GGG | 0.275169 | 3_4:-75228889 | None:intergenic |
| AATGGAGGCTAATCAGATTA+AGG | 0.289876 | 3_4:+75234710 | Msa0522160:three_prime_UTR |
| TGGAATTTGAATTTCATTAC+TGG | 0.299937 | 3_4:-75230905 | None:intergenic |
| CGCCCTATTGTATATAAAAC+AGG | 0.301593 | 3_4:+75234807 | Msa0522160:three_prime_UTR |
| TCTGAGAGATAGTGAGAGTA+AGG | 0.312649 | 3_4:+75233813 | Msa0522160:CDS |
| GAAACATAAATTTCCATTCC+CGG | 0.321696 | 3_4:-75232937 | None:intergenic |
| GGAAGCTGATTGTTCAAGTT+TGG | 0.324383 | 3_4:-75228812 | None:intergenic |
| AATTTACTAGTACAACTTTC+AGG | 0.325729 | 3_4:-75233204 | None:intergenic |
| AACATACTAGGGATTGCATT+AGG | 0.327078 | 3_4:-75232063 | None:intergenic |
| GAGAAAGTCAAGGGAGCGTT+TGG | 0.328886 | 3_4:-75228743 | None:intergenic |
| TAAGCATAATTGCAGGTTCA+TGG | 0.335996 | 3_4:+75230657 | Msa0522160:intron |
| CATATATTAACCTCGACATT+TGG | 0.344144 | 3_4:-75231733 | None:intergenic |
| CTAACAGATGTCCGCTTCTC+TGG | 0.358311 | 3_4:-75233156 | None:intergenic |
| TGCAGTTCGTTCTCTTCTAT+AGG | 0.367427 | 3_4:-75232147 | None:intergenic |
| GCAGTTCGTTCTCTTCTATA+GGG | 0.376096 | 3_4:-75232146 | None:intergenic |
| ATTGAATTTGGAAGTTTAGA+TGG | 0.377967 | 3_4:+75235032 | Msa0522160:three_prime_UTR |
| CAATCAGCTTCCAACGATAA+TGG | 0.378069 | 3_4:+75228823 | Msa0522160:exon |
| TTGTTGACTCCACTCATGAT+AGG | 0.379040 | 3_4:+75233391 | Msa0522160:CDS |
| AACAACAAAGTTCCCACCTC+TGG | 0.389216 | 3_4:-75234886 | None:intergenic |
| GGGTATGCAGGAGTAATTAT+TGG | 0.389243 | 3_4:-75232222 | None:intergenic |
| TCTCAATCGTAACACTGAAT+TGG | 0.391289 | 3_4:+75228967 | Msa0522160:CDS |
| GGGCATAGCATTACAGGGTT+TGG | 0.397753 | 3_4:-75232126 | None:intergenic |
| GCAATTGAGGTTCTGGGTGC+TGG | 0.397766 | 3_4:-75233716 | None:intergenic |
| GTTTAGGTTACTGGATTCCT+TGG | 0.400709 | 3_4:+75231994 | Msa0522160:intron |
| CAATAATGTGAATCTCAAAC+TGG | 0.401939 | 3_4:-75228709 | None:intergenic |
| TGCAGAATGCGCACAAGGCT+TGG | 0.402768 | 3_4:-75232797 | None:intergenic |
| GTGGGGCCAGCAATTGAGAT+AGG | 0.409562 | 3_4:-75228935 | None:intergenic |
| CTTTGCTGAGGTACTGGGAA+TGG | 0.409726 | 3_4:+75234648 | Msa0522160:exon |
| AATCTAGAAACCAACATACT+AGG | 0.410770 | 3_4:-75232075 | None:intergenic |
| AAATTATTATGTATGTATAC+TGG | 0.413244 | 3_4:+75232911 | Msa0522160:CDS |
| GCACAACATCCTTGCTGAAA+TGG | 0.417902 | 3_4:+75230841 | Msa0522160:CDS |
| CGAACTGCATTTACCTATAT+GGG | 0.423486 | 3_4:+75232161 | Msa0522160:CDS |
| GGTTCTTCGCCGCCTTGATC+AGG | 0.423547 | 3_4:+75229145 | Msa0522160:CDS |
| AAGGAAGAGACAGGTGTGAT+TGG | 0.425105 | 3_4:+75228659 | Msa0522160:five_prime_UTR |
| AAGAGACAGGTGTGATTGGT+TGG | 0.429468 | 3_4:+75228663 | Msa0522160:five_prime_UTR |
| CATACAAAACTGTACCTTCA+AGG | 0.432406 | 3_4:-75232572 | None:intergenic |
| GAAAGTTGTACTAGTAAATT+GGG | 0.437207 | 3_4:+75233207 | Msa0522160:CDS |
| TCAAGGTTAGCTGTCTTAGC+CGG | 0.437995 | 3_4:-75232555 | None:intergenic |
| CGAGTGCGTTTGTAACCATC+TGG | 0.438734 | 3_4:-75232997 | None:intergenic |
| ACAAAACCTATCTCAATTGC+TGG | 0.439210 | 3_4:+75228929 | Msa0522160:CDS |
| GCTTGTTCTTGTTGTGGCGG+CGG | 0.441177 | 3_4:-75228890 | None:intergenic |
| TGTTCTTGTTGTGGCGGCGG+GGG | 0.441606 | 3_4:-75228887 | None:intergenic |
| ATCTGTGTAGCCTCGTTGGC+GGG | 0.446189 | 3_4:-75229807 | None:intergenic |
| AGGTTCTGGGTGCTGGCAAT+TGG | 0.448782 | 3_4:-75233709 | None:intergenic |
| ATTGAAGGGGTTAGGCTAGA+TGG | 0.450370 | 3_4:+75233258 | Msa0522160:CDS |
| TAGGTTACTGGATTCCTTGG+AGG | 0.452048 | 3_4:+75231997 | Msa0522160:intron |
| ACATACTAGGGATTGCATTA+GGG | 0.455503 | 3_4:-75232062 | None:intergenic |
| GGAGGTGTAGAGCCACCGTT+AGG | 0.459771 | 3_4:-75228860 | None:intergenic |
| TGTTGCTTTGCTGAGGTACT+GGG | 0.460057 | 3_4:+75234643 | Msa0522160:exon |
| GAAGAAGAACCCTGAAATGA+TGG | 0.460726 | 3_4:+75233116 | Msa0522160:CDS |
| CACCTCGCAATTGAGGTTCT+GGG | 0.462098 | 3_4:-75233722 | None:intergenic |
| CAAGGTTAGCTGTCTTAGCC+GGG | 0.470013 | 3_4:-75232554 | None:intergenic |
| CATGGGCTTGCAAAGAAAAG+AGG | 0.470510 | 3_4:+75232825 | Msa0522160:CDS |
| TGCAAAATCTTATGCTACAC+TGG | 0.471864 | 3_4:+75234617 | Msa0522160:CDS |
| GCTTAACATCCATCATTTCA+GGG | 0.473503 | 3_4:-75233125 | None:intergenic |
| ATTACTGGGACATGTGCATC+AGG | 0.474856 | 3_4:-75230890 | None:intergenic |
| AAGTCATCTGATGGACTCTC+AGG | 0.475860 | 3_4:+75233318 | Msa0522160:CDS |
| GCAAATCTATAGATATTCCT+TGG | 0.478520 | 3_4:-75230925 | None:intergenic |
| GATGGACCTTTCAGAAGAGC+TGG | 0.480410 | 3_4:-75233088 | None:intergenic |
| CGGAACCGTCTGAGATATCC+AGG | 0.480431 | 3_4:-75231633 | None:intergenic |
| TAATGTGATACCTGTCCCTA+TGG | 0.485105 | 3_4:-75232197 | None:intergenic |
| TTTGCTGAGGTACTGGGAAT+GGG | 0.485818 | 3_4:+75234649 | Msa0522160:exon |
| TGATTGTTCAAGTTTGGAGA+TGG | 0.485929 | 3_4:-75228806 | None:intergenic |
| GGGTCTATTCACAGTGGCGG+TGG | 0.488614 | 3_4:+75232103 | Msa0522160:CDS |
| AACCATGCGGCTGAGAAAAT+GGG | 0.488999 | 3_4:+75233036 | Msa0522160:CDS |
| ATGAGTATCGAGTGTATTGA+AGG | 0.491692 | 3_4:+75233243 | Msa0522160:CDS |
| GAATTCATGCAAGGGTATGC+AGG | 0.493227 | 3_4:-75232234 | None:intergenic |
| CAATGCAGATCGTGAAAAGC+TGG | 0.495300 | 3_4:+75229771 | Msa0522160:intron |
| TTTGGGGAATTGGGGTTTGG+AGG | 0.495456 | 3_4:-75228765 | None:intergenic |
| AGAAACTCACCTCGCAATTG+AGG | 0.496667 | 3_4:-75233729 | None:intergenic |
| AAGCACTCTTCGTGTTATGA+TGG | 0.498529 | 3_4:+75232275 | Msa0522160:CDS |
| TTTCACAAGGGCAGAATGTA+CGG | 0.499588 | 3_4:+75233678 | Msa0522160:CDS |
| GTTACGATTGAGATCAGCTT+CGG | 0.503977 | 3_4:-75228957 | None:intergenic |
| ATTCCTTGGAGGAGTAAATT+GGG | 0.506443 | 3_4:+75232008 | Msa0522160:CDS |
| GTTTGCTTGCGATGTGGATG+TGG | 0.508377 | 3_4:+75234906 | Msa0522160:three_prime_UTR |
| GATACGACAAAGTGCAACTC+TGG | 0.509921 | 3_4:+75233063 | Msa0522160:CDS |
| ATACACTCGATACTCATTTG+AGG | 0.510734 | 3_4:-75233237 | None:intergenic |
| CAAAGAAAAGAGGGAGTAAG+AGG | 0.511284 | 3_4:+75232835 | Msa0522160:CDS |
| ATCTAGAAACCAACATACTA+GGG | 0.511391 | 3_4:-75232074 | None:intergenic |
| AGAAATAAGTGACCTGATCA+AGG | 0.513935 | 3_4:-75229157 | None:intergenic |
| CTCATGATAGGCTGAAATCA+AGG | 0.514106 | 3_4:+75233403 | Msa0522160:CDS |
| GCTAAGACAGCTAACCTTGA+AGG | 0.516604 | 3_4:+75232558 | Msa0522160:CDS |
| TTTCTGCGAGGATCCCATAT+AGG | 0.521287 | 3_4:-75232174 | None:intergenic |
| TCGAGTGTATTGAAGGGGTT+AGG | 0.521648 | 3_4:+75233250 | Msa0522160:CDS |
| TGTATACTGGAAGCCGGGAA+TGG | 0.522453 | 3_4:+75232924 | Msa0522160:CDS |
| TTGTTGGCTTGTTCTTGTTG+TGG | 0.523802 | 3_4:-75228896 | None:intergenic |
| TATGTATGTATACTGGAAGC+CGG | 0.523871 | 3_4:+75232918 | Msa0522160:CDS |
| CTATAGGGCATAGCATTACA+GGG | 0.524690 | 3_4:-75232131 | None:intergenic |
| GGGACATGTGCATCAGGTAC+TGG | 0.525311 | 3_4:-75230884 | None:intergenic |
| GGAATTTGAATTTCATTACT+GGG | 0.525618 | 3_4:-75230904 | None:intergenic |
| GGATTGCATTAGGGTAAAGC+TGG | 0.527585 | 3_4:-75232053 | None:intergenic |
| TAATTGCAGGTTCATGGACC+TGG | 0.530132 | 3_4:+75230663 | Msa0522160:intron |
| TGTGAAATCAAGTCATCTGA+TGG | 0.530158 | 3_4:+75233309 | Msa0522160:CDS |
| GCTTGTCGAGACATTGTAGC+TGG | 0.530844 | 3_4:-75232256 | None:intergenic |
| ATTACATTTACATAGCATGA+TGG | 0.533614 | 3_4:-75234946 | None:intergenic |
| AGAAAGTCAAGGGAGCGTTT+GGG | 0.534390 | 3_4:-75228742 | None:intergenic |
| GATTGTTCAAGTTTGGAGAT+GGG | 0.536486 | 3_4:-75228805 | None:intergenic |
| CTCGCAGAAACCATAGGGAC+AGG | 0.538211 | 3_4:+75232187 | Msa0522160:CDS |
| CGATTGAGATCAGCTTCGGT+GGG | 0.538821 | 3_4:-75228953 | None:intergenic |
| GATCTGTGTAGCCTCGTTGG+CGG | 0.541806 | 3_4:-75229808 | None:intergenic |
| TAATGCAATCCCTAGTATGT+TGG | 0.542179 | 3_4:+75232065 | Msa0522160:CDS |
| TCTGCATACTCATGTGGATA+AGG | 0.542761 | 3_4:-75232769 | None:intergenic |
| GGGTTTGGAGGAGAAAGTCA+AGG | 0.545782 | 3_4:-75228753 | None:intergenic |
| GGATCCTCGCAGAAACCATA+GGG | 0.546951 | 3_4:+75232182 | Msa0522160:CDS |
| ACGATTGAGATCAGCTTCGG+TGG | 0.547207 | 3_4:-75228954 | None:intergenic |
| GAGTCAATGAGGACAAAGCT+CGG | 0.548398 | 3_4:+75233545 | Msa0522160:CDS |
| GGGATCCTCGCAGAAACCAT+AGG | 0.548811 | 3_4:+75232181 | Msa0522160:CDS |
| AAGCTTGCCAAATTGGGAAG+AGG | 0.549390 | 3_4:+75233615 | Msa0522160:CDS |
| GCAAAATCTTATGCTACACT+GGG | 0.550317 | 3_4:+75234618 | Msa0522160:CDS |
| ACCTCTCGATTTACATAGGA+AGG | 0.552492 | 3_4:-75230714 | None:intergenic |
| CTTGATTTCACAATTGCTGT+CGG | 0.552840 | 3_4:-75233298 | None:intergenic |
| GACTTTAGAAGTTCAGAATG+AGG | 0.554195 | 3_4:+75233425 | Msa0522160:CDS |
| ATGTATGTATACTGGAAGCC+GGG | 0.558185 | 3_4:+75232919 | Msa0522160:CDS |
| AGATTAGGAACAGTTATGGA+TGG | 0.561357 | 3_4:+75233768 | Msa0522160:intron |
| ACAACAAAGTTCCCACCTCT+GGG | 0.562793 | 3_4:-75234885 | None:intergenic |
| GAGGTACTGGGAATGGGCAA+AGG | 0.564355 | 3_4:+75234655 | Msa0522160:exon |
| AGAAGCTGCAAGTAGAGAAG+AGG | 0.565106 | 3_4:+75229124 | Msa0522160:CDS |
| TCTGATCTGTGTAGCCTCGT+TGG | 0.565299 | 3_4:-75229811 | None:intergenic |
| TCGGAAACCACCATTATCGT+TGG | 0.566154 | 3_4:-75228833 | None:intergenic |
| TCAATCTGCAGCGATTTCGT+TGG | 0.567422 | 3_4:+75235064 | Msa0522160:three_prime_UTR |
| AGCTTGCCAAATTGGGAAGA+GGG | 0.568586 | 3_4:+75233616 | Msa0522160:CDS |
| AGAGGGAGTAAGAGGTCAAG+AGG | 0.568590 | 3_4:+75232843 | Msa0522160:CDS |
| CTGGATCCAGCTCTTCTGAA+AGG | 0.568898 | 3_4:+75233082 | Msa0522160:CDS |
| GTAATGAAATTCAAATTCCA+AGG | 0.569489 | 3_4:+75230908 | Msa0522160:CDS |
| ATGATGGATGTATCAATCAC+AGG | 0.570189 | 3_4:-75234930 | None:intergenic |
| CATATTTGCGTACCCAGAGG+TGG | 0.572136 | 3_4:+75234873 | Msa0522160:three_prime_UTR |
| TGATTTCAGCCTATCATGAG+TGG | 0.572409 | 3_4:-75233400 | None:intergenic |
| TCTGATGGACTCTCAGGAAG+TGG | 0.572545 | 3_4:+75233324 | Msa0522160:CDS |
| TTGTTCTTGTTGTGGCGGCG+GGG | 0.573047 | 3_4:-75228888 | None:intergenic |
| CAGATAGAGCGAGATACAAG+TGG | 0.576975 | 3_4:+75232730 | Msa0522160:intron |
| CTGAGAGATAGTGAGAGTAA+GGG | 0.577260 | 3_4:+75233814 | Msa0522160:CDS |
| GGAGAGGTTGGGTAGAATCC+CGG | 0.578285 | 3_4:+75232536 | Msa0522160:CDS |
| ATGGGCTTGCAAAGAAAAGA+GGG | 0.578749 | 3_4:+75232826 | Msa0522160:CDS |
| TAAGAATTTGATCCGCCACT+CGG | 0.580007 | 3_4:-75231702 | None:intergenic |
| CAGGTGTGATTGGTTGGAGT+GGG | 0.580960 | 3_4:+75228669 | Msa0522160:five_prime_UTR |
| AAAGTGTCTATGTCCACTCC+AGG | 0.581764 | 3_4:-75230681 | None:intergenic |
| TAAACTTGTTCCAAATGTCG+AGG | 0.582707 | 3_4:+75231723 | Msa0522160:CDS |
| TATCACCTCTCGATTTACAT+AGG | 0.583433 | 3_4:-75230718 | None:intergenic |
| ACAGGTGTGATTGGTTGGAG+TGG | 0.585338 | 3_4:+75228668 | Msa0522160:five_prime_UTR |
| CTACACAGATCAGATGGTTG+AGG | 0.585660 | 3_4:+75229820 | Msa0522160:CDS |
| AGAGCCACCGTTAGGGCTGT+CGG | 0.588141 | 3_4:-75228852 | None:intergenic |
| GTGGTTTCCGACAGCCCTAA+CGG | 0.588449 | 3_4:+75228845 | Msa0522160:CDS |
| AGTCAATGAGGACAAAGCTC+GGG | 0.588552 | 3_4:+75233546 | Msa0522160:CDS |
| TCTTAATGGTTGCCGAGTGG+CGG | 0.589415 | 3_4:+75231690 | Msa0522160:CDS |
| GACATAGACACTTTGTGCAT+CGG | 0.589418 | 3_4:+75230690 | Msa0522160:CDS |
| GAGGTGTAGAGCCACCGTTA+GGG | 0.594118 | 3_4:-75228859 | None:intergenic |
| TAGCCCAATTTACTCCTCCA+AGG | 0.594120 | 3_4:-75232011 | None:intergenic |
| TGAGTATCGAGTGTATTGAA+GGG | 0.596741 | 3_4:+75233244 | Msa0522160:CDS |
| CTGGGGCTGTTGCTTTGCTG+AGG | 0.597619 | 3_4:+75234636 | Msa0522160:CDS |
| AAACACACTCTAGCCTCTGT+GGG | 0.600970 | 3_4:-75233179 | None:intergenic |
| TACATTGATGAACAGCATGA+TGG | 0.601254 | 3_4:+75234763 | Msa0522160:three_prime_UTR |
| ACAAAGCTTGTAATTTCACA+AGG | 0.601723 | 3_4:+75233665 | Msa0522160:CDS |
| TTTGTTGTTTGCTTGCGATG+TGG | 0.601983 | 3_4:+75234900 | Msa0522160:three_prime_UTR |
| TCGTAACACTGAATTGGAGA+AGG | 0.606004 | 3_4:+75228973 | Msa0522160:CDS |
| GAAACACACTCTAGCCTCTG+TGG | 0.608395 | 3_4:-75233180 | None:intergenic |
| TTGTAGCTGGAATTCATGCA+AGG | 0.612790 | 3_4:-75232243 | None:intergenic |
| TTCATCAACATCATACAGAA+CGG | 0.616959 | 3_4:-75231653 | None:intergenic |
| GCAGGTTCATGGACCTGGAG+TGG | 0.617886 | 3_4:+75230668 | Msa0522160:intron |
| TAACTTCTTCCATTTCAGCA+AGG | 0.618799 | 3_4:-75230850 | None:intergenic |
| GGTTTGGAGGAGAAAGTCAA+GGG | 0.619492 | 3_4:-75228752 | None:intergenic |
| TTAGGGTCTATTCACAGTGG+CGG | 0.623887 | 3_4:+75232100 | Msa0522160:CDS |
| AGCCAGATAAACCAGAGAAG+CGG | 0.626338 | 3_4:+75233145 | Msa0522160:CDS |
| ATGATGGAACAGTTCTGCTA+TGG | 0.632180 | 3_4:+75232291 | Msa0522160:CDS |
| CTTCTGAAAGGTCCATCAAG+AGG | 0.632992 | 3_4:+75233094 | Msa0522160:CDS |
| ACGAGGCTACACAGATCAGA+TGG | 0.633586 | 3_4:+75229814 | Msa0522160:CDS |
| GAGTATCGAGTGTATTGAAG+GGG | 0.634925 | 3_4:+75233245 | Msa0522160:CDS |
| ACAAACGCACTCGAATGCCT+AGG | 0.636758 | 3_4:+75233007 | Msa0522160:CDS |
| AGATAGAGCGAGATACAAGT+GGG | 0.636989 | 3_4:+75232731 | Msa0522160:intron |
| GACGTGTCTGCATACTCATG+TGG | 0.637311 | 3_4:-75232775 | None:intergenic |
| GAGGGAGTAAGAGGTCAAGA+GGG | 0.638723 | 3_4:+75232844 | Msa0522160:CDS |
| TTGGCTTGTTCTTGTTGTGG+CGG | 0.638810 | 3_4:-75228893 | None:intergenic |
| TGAAGAGCTGATACAAACAA+TGG | 0.640811 | 3_4:+75234692 | Msa0522160:three_prime_UTR |
| AGAGTAAGGGAACTTTGCAG+AGG | 0.641055 | 3_4:+75233827 | Msa0522160:CDS |
| GATTGAGATCAGCTTCGGTG+GGG | 0.644690 | 3_4:-75228952 | None:intergenic |
| CAAAGCTTGTAATTTCACAA+GGG | 0.646659 | 3_4:+75233666 | Msa0522160:CDS |
| GCCGCATGGTTTATATGCCT+AGG | 0.651199 | 3_4:-75233024 | None:intergenic |
| GCCCTATTGTATATAAAACA+GGG | 0.655105 | 3_4:+75234808 | Msa0522160:three_prime_UTR |
| CACCCAGAACCTCAATTGCG+AGG | 0.656438 | 3_4:+75233720 | Msa0522160:CDS |
| GATGGAGATGCTTTAAAATG+CGG | 0.658430 | 3_4:+75234781 | Msa0522160:three_prime_UTR |
| TGTAGCTGGAATTCATGCAA+GGG | 0.661048 | 3_4:-75232242 | None:intergenic |
| AGAGCCAAAAGTGAAAATGA+CGG | 0.665482 | 3_4:-75229852 | None:intergenic |
| ATATTTGCGTACCCAGAGGT+GGG | 0.665579 | 3_4:+75234874 | Msa0522160:three_prime_UTR |
| AATGCAGATCGTGAAAAGCT+GGG | 0.665878 | 3_4:+75229772 | Msa0522160:intron |
| TCAGCTTCCAACGATAATGG+TGG | 0.666264 | 3_4:+75228826 | Msa0522160:exon |
| GAGTAAGGGAACTTTGCAGA+GGG | 0.666711 | 3_4:+75233828 | Msa0522160:CDS |
| AAGTCTTAATGGTTGCCGAG+TGG | 0.667186 | 3_4:+75231687 | Msa0522160:CDS |
| CAGGACCTGGATATCTCAGA+CGG | 0.670665 | 3_4:+75231628 | Msa0522160:intron |
| ATTTCAGAATGGAGTCAATG+AGG | 0.672391 | 3_4:+75233534 | Msa0522160:intron |
| TCCTTCCTATGTAAATCGAG+AGG | 0.672788 | 3_4:+75230713 | Msa0522160:CDS |
| GGACAGCAGTTTGATATACG+TGG | 0.673860 | 3_4:+75232865 | Msa0522160:CDS |
| CCCTATTGTATATAAAACAG+GGG | 0.680206 | 3_4:+75234809 | Msa0522160:three_prime_UTR |
| GTAACAGACTCACCCCTAGT+CGG | 0.683713 | 3_4:-75229877 | None:intergenic |
| AGTTGTACTAGTAAATTGGG+TGG | 0.697247 | 3_4:+75233210 | Msa0522160:CDS |
| GCCTAGGCATATAAACCATG+CGG | 0.702233 | 3_4:+75233023 | Msa0522160:CDS |
| AGAGCTGATACAAACAATGG+AGG | 0.705771 | 3_4:+75234695 | Msa0522160:three_prime_UTR |
| AGTGGTACAATTACTGACGT+AGG | 0.706187 | 3_4:+75233342 | Msa0522160:CDS |
| AAGCAGCTGACCCGCCAACG+AGG | 0.710522 | 3_4:+75229797 | Msa0522160:CDS |
| GTTTCCGACAGCCCTAACGG+TGG | 0.710822 | 3_4:+75228848 | Msa0522160:CDS |
| TCTTTAGGGTCTATTCACAG+TGG | 0.718102 | 3_4:+75232097 | Msa0522160:CDS |
| TAACATATTTGCGTACCCAG+AGG | 0.718156 | 3_4:+75234870 | Msa0522160:three_prime_UTR |
| CTGTCCCTATGGTTTCTGCG+AGG | 0.721142 | 3_4:-75232186 | None:intergenic |
| TTGAGCTTAACAAATCACAG+TGG | 0.747863 | 3_4:+75232419 | Msa0522160:CDS |
| GGACATCTGTTAGCCCACAG+AGG | 0.750930 | 3_4:+75233166 | Msa0522160:CDS |
| AATAAGTGACCTGATCAAGG+CGG | 0.753360 | 3_4:-75229154 | None:intergenic |
| CAAAATCTTATGCTACACTG+GGG | 0.787010 | 3_4:+75234619 | Msa0522160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATATGTTTTCATTAATT+TGG | + | chr3_4:75231748-75231767 | Msa0522160:intron | 10.0% |
| !! | AAATTTAAAAATGAAACAAA+AGG | - | chr3_4:75234371-75234390 | None:intergenic | 10.0% |
| !! | ATTAATTATTAAATAGATGC+TGG | - | chr3_4:75229422-75229441 | None:intergenic | 15.0% |
| !!! | ATTAAATTTTTGTAGTGATA+AGG | + | chr3_4:75229740-75229759 | Msa0522160:intron | 15.0% |
| !! | TATACTTAAACGTTTATATA+TGG | + | chr3_4:75230131-75230150 | Msa0522160:intron | 15.0% |
| !!! | TTAACAAATTCTTTTGTTTT+TGG | + | chr3_4:75232671-75232690 | Msa0522160:intron | 15.0% |
| !! | AAATTATTATGTATGTATAC+TGG | + | chr3_4:75232911-75232930 | Msa0522160:CDS | 15.0% |
| !! | CATATTATTAAATCAGAAAA+TGG | + | chr3_4:75234104-75234123 | Msa0522160:intron | 15.0% |
| !! | AGAATATAATAATTCAAGAG+TGG | - | chr3_4:75229455-75229474 | None:intergenic | 20.0% |
| !! | CGAATAAAGAAGAAAAAAAA+AGG | - | chr3_4:75229684-75229703 | None:intergenic | 20.0% |
| !! | CAATTTCTACAATAAATCAA+AGG | - | chr3_4:75230014-75230033 | None:intergenic | 20.0% |
| !! | AAATTGGAAGTAATATTCAT+TGG | - | chr3_4:75230372-75230391 | None:intergenic | 20.0% |
| !!! | GAGACATTTTATGATAAAAT+TGG | - | chr3_4:75230388-75230407 | None:intergenic | 20.0% |
| !!! | AAATGGTATTTTCATAAAAC+AGG | - | chr3_4:75230583-75230602 | None:intergenic | 20.0% |
| !! | AATAATTTAAGCATAATTGC+AGG | + | chr3_4:75230650-75230669 | Msa0522160:intron | 20.0% |
| !! | AAATATAGCAGAACATATAA+AGG | - | chr3_4:75231019-75231038 | None:intergenic | 20.0% |
| !! | TTATTAAAACATTTGTCTCT+TGG | + | chr3_4:75231038-75231057 | Msa0522160:intron | 20.0% |
| !! | TATTAAAACATTTGTCTCTT+GGG | + | chr3_4:75231039-75231058 | Msa0522160:intron | 20.0% |
| !!! | TTATATTTCTTTCCTGTTTT+TGG | + | chr3_4:75231182-75231201 | Msa0522160:intron | 20.0% |
| !! | TTAAGTTTGATGCATTATAT+TGG | + | chr3_4:75231424-75231443 | Msa0522160:intron | 20.0% |
| !!! | ATTGAGATGTTTAAAGTTTT+GGG | + | chr3_4:75231855-75231874 | Msa0522160:CDS | 20.0% |
| !!! | GAAAAGCATGTATTAATATA+CGG | - | chr3_4:75232697-75232716 | None:intergenic | 20.0% |
| !! | TTAAAAATGAAACAAAAGGA+AGG | - | chr3_4:75234367-75234386 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTGATTACTTTGT+CGG | + | chr3_4:75234387-75234406 | Msa0522160:intron | 20.0% |
| !!! | TTGTAAATACTGTTTTTCTT+TGG | + | chr3_4:75234545-75234564 | Msa0522160:intron | 20.0% |
| !!! | AATGTTGAAACAGATATTTT+TGG | + | chr3_4:75235005-75235024 | Msa0522160:three_prime_UTR | 20.0% |
| !! | TTTTGTGAATCTATCTTTGT+TGG | - | chr3_4:75228915-75228934 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTCTTTCAGTTTT+TGG | + | chr3_4:75229073-75229092 | Msa0522160:intron | 25.0% |
| !!! | TTATTGTCGTTTTCTTGTTT+TGG | + | chr3_4:75229269-75229288 | Msa0522160:intron | 25.0% |
| !! | AATCAGTCTCACAAATTTTT+GGG | + | chr3_4:75229364-75229383 | Msa0522160:intron | 25.0% |
| ! | GTTAATTTCTCCTGATTATT+TGG | + | chr3_4:75229961-75229980 | Msa0522160:intron | 25.0% |
| ! | GGATAAACCAAAAATATATC+AGG | - | chr3_4:75230186-75230205 | None:intergenic | 25.0% |
| !!! | GATATATTTTTGGTTTATCC+TGG | + | chr3_4:75230186-75230205 | Msa0522160:intron | 25.0% |
| ! | TCAACATTATTTAATTCCCA+GGG | + | chr3_4:75230250-75230269 | Msa0522160:intron | 25.0% |
| !! | TTTTATGCAATTCATAGAAC+AGG | - | chr3_4:75230548-75230567 | None:intergenic | 25.0% |
| ! | CACTTACAAAACAAACAAAA+TGG | - | chr3_4:75230600-75230619 | None:intergenic | 25.0% |
| !!! | CATTTTGTTTGTTTTGTAAG+TGG | + | chr3_4:75230598-75230617 | Msa0522160:intron | 25.0% |
| ! | GGAATTTGAATTTCATTACT+GGG | - | chr3_4:75230907-75230926 | None:intergenic | 25.0% |
| ! | TGGAATTTGAATTTCATTAC+TGG | - | chr3_4:75230908-75230927 | None:intergenic | 25.0% |
| ! | GTAATGAAATTCAAATTCCA+AGG | + | chr3_4:75230908-75230927 | Msa0522160:CDS | 25.0% |
| ! | AAGAAAACTCAACTTTACAA+AGG | - | chr3_4:75231102-75231121 | None:intergenic | 25.0% |
| !! | TTTGTAAAGTTGAGTTTTCT+TGG | + | chr3_4:75231101-75231120 | Msa0522160:intron | 25.0% |
| !! | TTGTAAAGTTGAGTTTTCTT+GGG | + | chr3_4:75231102-75231121 | Msa0522160:intron | 25.0% |
| !!! | TTTAGTTGTTTTATTGCTTG+AGG | + | chr3_4:75231300-75231319 | Msa0522160:intron | 25.0% |
| ! | AAAAATAAGGCATAAATGGA+TGG | - | chr3_4:75231489-75231508 | None:intergenic | 25.0% |
| ! | TAGGAAAAATAAGGCATAAA+TGG | - | chr3_4:75231493-75231512 | None:intergenic | 25.0% |
| !!! | ATTTATGCCTTATTTTTCCT+AGG | + | chr3_4:75231492-75231511 | Msa0522160:intron | 25.0% |
| !! | TTTTTCTCCTAGGAAAAATA+AGG | - | chr3_4:75231502-75231521 | None:intergenic | 25.0% |
| ! | GGGATTAAAATGAATAAATG+AGG | - | chr3_4:75231544-75231563 | None:intergenic | 25.0% |
| !! | TAAGGGAAACTAGATTTTAA+GGG | - | chr3_4:75231564-75231583 | None:intergenic | 25.0% |
| !! | TTAAGGGAAACTAGATTTTA+AGG | - | chr3_4:75231565-75231584 | None:intergenic | 25.0% |
| !!! | AAAGTGAAGTCAAGTTTTAA+GGG | - | chr3_4:75231581-75231600 | None:intergenic | 25.0% |
| !! | TAAAGTGAAGTCAAGTTTTA+AGG | - | chr3_4:75231582-75231601 | None:intergenic | 25.0% |
| !!! | CATTGAGATGTTTAAAGTTT+TGG | + | chr3_4:75231854-75231873 | Msa0522160:CDS | 25.0% |
| ! | AAAGAAATTAGTAAGGTTGT+AGG | - | chr3_4:75231919-75231938 | None:intergenic | 25.0% |
| ! | GGTTACTAAAGAAATTAGTA+AGG | - | chr3_4:75231926-75231945 | None:intergenic | 25.0% |
| ! | CTAATTTCTTTAGTAACCAA+TGG | + | chr3_4:75231928-75231947 | Msa0522160:intron | 25.0% |
| ! | TGATTAATACTTCTACTGTT+AGG | + | chr3_4:75232393-75232412 | Msa0522160:intron | 25.0% |
| ! | AATTTACTAGTACAACTTTC+AGG | - | chr3_4:75233207-75233226 | None:intergenic | 25.0% |
| ! | TGAAAGTTGTACTAGTAAAT+TGG | + | chr3_4:75233206-75233225 | Msa0522160:CDS | 25.0% |
| ! | GAAAGTTGTACTAGTAAATT+GGG | + | chr3_4:75233207-75233226 | Msa0522160:CDS | 25.0% |
| ! | GAAATTCCTTAATTAGAAGT+TGG | + | chr3_4:75233506-75233525 | Msa0522160:intron | 25.0% |
| !! | TATTTGAGGACTTTTAGATT+AGG | + | chr3_4:75233753-75233772 | Msa0522160:intron | 25.0% |
| !! | TTTTAGATTAGGAACAGTTA+TGG | + | chr3_4:75233764-75233783 | Msa0522160:intron | 25.0% |
| ! | ATGGAAGTGAAAAATAAACT+GGG | + | chr3_4:75233787-75233806 | Msa0522160:CDS | 25.0% |
| !!! | AGAGAGAGTATTTCAAAATA+TGG | + | chr3_4:75233886-75233905 | Msa0522160:intron | 25.0% |
| ! | ATATTAGATCAACTTTACCA+CGG | - | chr3_4:75233960-75233979 | None:intergenic | 25.0% |
| ! | GTGTTAACAAGTTATAACAA+GGG | - | chr3_4:75234080-75234099 | None:intergenic | 25.0% |
| ! | AGTGTTAACAAGTTATAACA+AGG | - | chr3_4:75234081-75234100 | None:intergenic | 25.0% |
| ! | ATGATCTTAGATTGTATATC+TGG | + | chr3_4:75234165-75234184 | Msa0522160:intron | 25.0% |
| ! | ATTATGAAATTCAATTGCCA+TGG | - | chr3_4:75234225-75234244 | None:intergenic | 25.0% |
| ! | AAATTAGAAAGAGCAAAGTT+AGG | - | chr3_4:75234416-75234435 | None:intergenic | 25.0% |
| !!! | ATACTGTTTTTCTTTGGTTT+TGG | + | chr3_4:75234551-75234570 | Msa0522160:intron | 25.0% |
| ! | ATTACATTTACATAGCATGA+TGG | - | chr3_4:75234949-75234968 | None:intergenic | 25.0% |
| ! | ATTGAATTTGGAAGTTTAGA+TGG | + | chr3_4:75235032-75235051 | Msa0522160:three_prime_UTR | 25.0% |
| CAATAATGTGAATCTCAAAC+TGG | - | chr3_4:75228712-75228731 | None:intergenic | 30.0% | |
| ! | ATTATTCCAAACGCGTTTTT+GGG | - | chr3_4:75228785-75228804 | None:intergenic | 30.0% |
| ATAGAAACAATGTGAAAGCA+TGG | - | chr3_4:75229023-75229042 | None:intergenic | 30.0% | |
| !!! | CTTTCAGTTTTTGGTTGATT+CGG | + | chr3_4:75229082-75229101 | Msa0522160:intron | 30.0% |
| !!! | TTTCAGTTTTTGGTTGATTC+GGG | + | chr3_4:75229083-75229102 | Msa0522160:intron | 30.0% |
| AAATTTGTGAGACTGATTGT+GGG | - | chr3_4:75229362-75229381 | None:intergenic | 30.0% | |
| AAAATTTGTGAGACTGATTG+TGG | - | chr3_4:75229363-75229382 | None:intergenic | 30.0% | |
| ! | CAATCAGTCTCACAAATTTT+TGG | + | chr3_4:75229363-75229382 | Msa0522160:intron | 30.0% |
| GATAGATTAATGCTTGTTCA+GGG | + | chr3_4:75229602-75229621 | Msa0522160:intron | 30.0% | |
| TTTCTTCTTTATTCGTGTAG+TGG | + | chr3_4:75229689-75229708 | Msa0522160:intron | 30.0% | |
| TGTAGAAATTGACAGTGAAA+TGG | + | chr3_4:75230023-75230042 | Msa0522160:intron | 30.0% | |
| GTAGAAATTGACAGTGAAAT+GGG | + | chr3_4:75230024-75230043 | Msa0522160:intron | 30.0% | |
| !! | GTGAAATGGGTTGAATATAA+TGG | + | chr3_4:75230037-75230056 | Msa0522160:intron | 30.0% |
| !! | AATGGGTTGAATATAATGGT+AGG | + | chr3_4:75230041-75230060 | Msa0522160:intron | 30.0% |
| ! | TGTAGAATTGTTGTTGTGAA+CGG | + | chr3_4:75230094-75230113 | Msa0522160:intron | 30.0% |
| AATAATAATACCACCTCTCA+CGG | + | chr3_4:75230156-75230175 | Msa0522160:intron | 30.0% | |
| GTAGAGTTTATAAAGGTTGT+TGG | - | chr3_4:75230223-75230242 | None:intergenic | 30.0% | |
| GGGAATTAAATAATGTTGAG+AGG | - | chr3_4:75230249-75230268 | None:intergenic | 30.0% | |
| CTCAACATTATTTAATTCCC+AGG | + | chr3_4:75230249-75230268 | Msa0522160:intron | 30.0% | |
| TTGTTTACTTTCATGCAGTA+CGG | - | chr3_4:75230417-75230436 | None:intergenic | 30.0% | |
| GCAAATCTATAGATATTCCT+TGG | - | chr3_4:75230928-75230947 | None:intergenic | 30.0% | |
| ! | GTATGCAAGCATATCTATTT+TGG | + | chr3_4:75230949-75230968 | Msa0522160:CDS | 30.0% |
| ATAAGAACCAAACTTACTTC+TGG | - | chr3_4:75230980-75230999 | None:intergenic | 30.0% | |
| GCAGAACATATAAAGGTAAA+AGG | - | chr3_4:75231012-75231031 | None:intergenic | 30.0% | |
| ! | TGTAAAGTTGAGTTTTCTTG+GGG | + | chr3_4:75231103-75231122 | Msa0522160:intron | 30.0% |
| TGCTATATAGCATGTATAGT+GGG | - | chr3_4:75231247-75231266 | None:intergenic | 30.0% | |
| ATGCTATATAGCATGTATAG+TGG | - | chr3_4:75231248-75231267 | None:intergenic | 30.0% | |
| CTAGGAATTATAGAGAATGT+AGG | + | chr3_4:75231273-75231292 | Msa0522160:intron | 30.0% | |
| GAATTATAGAGAATGTAGGA+AGG | + | chr3_4:75231277-75231296 | Msa0522160:intron | 30.0% | |
| TCGCATAATACACATAAGTT+TGG | + | chr3_4:75231356-75231375 | Msa0522160:intron | 30.0% | |
| ! | TTTGGTAAATGCATGTTTTG+AGG | + | chr3_4:75231374-75231393 | Msa0522160:intron | 30.0% |
| ! | AAGAAACATGTTTTTCTCCT+AGG | - | chr3_4:75231512-75231531 | None:intergenic | 30.0% |
| AGGAGAAAAACATGTTTCTT+TGG | + | chr3_4:75231512-75231531 | Msa0522160:intron | 30.0% | |
| ! | TTTGAAATACACTTATCCAC+AGG | + | chr3_4:75231609-75231628 | Msa0522160:intron | 30.0% |
| TTCATCAACATCATACAGAA+CGG | - | chr3_4:75231656-75231675 | None:intergenic | 30.0% | |
| CATATATTAACCTCGACATT+TGG | - | chr3_4:75231736-75231755 | None:intergenic | 30.0% | |
| CTATCATTATGAAGGGTTAA+TGG | - | chr3_4:75231821-75231840 | None:intergenic | 30.0% | |
| !! | GAAAGTGCTATCATTATGAA+GGG | - | chr3_4:75231828-75231847 | None:intergenic | 30.0% |
| ATCTAGAAACCAACATACTA+GGG | - | chr3_4:75232077-75232096 | None:intergenic | 30.0% | |
| AATCTAGAAACCAACATACT+AGG | - | chr3_4:75232078-75232097 | None:intergenic | 30.0% | |
| !! | TGTTGGTTTCTAGATTCTTT+AGG | + | chr3_4:75232082-75232101 | Msa0522160:CDS | 30.0% |
| ! | GTTGGTTTCTAGATTCTTTA+GGG | + | chr3_4:75232083-75232102 | Msa0522160:CDS | 30.0% |
| TAAGCCTCAAAAAAGACATA+TGG | - | chr3_4:75232460-75232479 | None:intergenic | 30.0% | |
| !! | ATGCTGATGATTTACTTTTG+TGG | + | chr3_4:75232515-75232534 | Msa0522160:CDS | 30.0% |
| ACATGAACTAAATTCAGATG+AGG | - | chr3_4:75232606-75232625 | None:intergenic | 30.0% | |
| GAAACATAAATTTCCATTCC+CGG | - | chr3_4:75232940-75232959 | None:intergenic | 30.0% | |
| TACAAAAAGCTTGCCAAATT+GGG | + | chr3_4:75233609-75233628 | Msa0522160:CDS | 30.0% | |
| ACAAAGCTTGTAATTTCACA+AGG | + | chr3_4:75233665-75233684 | Msa0522160:CDS | 30.0% | |
| CAAAGCTTGTAATTTCACAA+GGG | + | chr3_4:75233666-75233685 | Msa0522160:CDS | 30.0% | |
| GATGGAAGTGAAAAATAAAC+TGG | + | chr3_4:75233786-75233805 | Msa0522160:CDS | 30.0% | |
| !! | GAGAGTATTTCAAAATATGG+TGG | + | chr3_4:75233889-75233908 | Msa0522160:intron | 30.0% |
| TAACAAGTTATAACAAGGGA+GGG | - | chr3_4:75234076-75234095 | None:intergenic | 30.0% | |
| TTAACAAGTTATAACAAGGG+AGG | - | chr3_4:75234077-75234096 | None:intergenic | 30.0% | |
| ! | TTTTCTCTTCCTATCTTGTT+GGG | + | chr3_4:75234135-75234154 | Msa0522160:intron | 30.0% |
| CAAATTATCTTGAAGCAAGA+GGG | - | chr3_4:75234191-75234210 | None:intergenic | 30.0% | |
| AATTTGGCTATCAATTTCCA+TGG | + | chr3_4:75234205-75234224 | Msa0522160:intron | 30.0% | |
| TTCATAATCAAGTTTCTGAC+CGG | + | chr3_4:75234237-75234256 | Msa0522160:intron | 30.0% | |
| !!! | ATTAAGGTTTTGGAGAGTTT+TGG | + | chr3_4:75234726-75234745 | Msa0522160:three_prime_UTR | 30.0% |
| GCCCTATTGTATATAAAACA+GGG | + | chr3_4:75234808-75234827 | Msa0522160:three_prime_UTR | 30.0% | |
| ! | CCCCTGTTTTATATACAATA+GGG | - | chr3_4:75234812-75234831 | None:intergenic | 30.0% |
| CCCTATTGTATATAAAACAG+GGG | + | chr3_4:75234809-75234828 | Msa0522160:three_prime_UTR | 30.0% | |
| ! | ATATAGTCTTTTCAGCTAAG+TGG | + | chr3_4:75234970-75234989 | Msa0522160:three_prime_UTR | 30.0% |
| !!! | GTTGAAACAGATATTTTTGG+CGG | + | chr3_4:75235008-75235027 | Msa0522160:three_prime_UTR | 30.0% |
| AAAAAGGAAAAGGAAGAGAC+AGG | + | chr3_4:75228650-75228669 | Msa0522160:five_prime_UTR | 35.0% | |
| ! | TTATTCCAAACGCGTTTTTG+GGG | - | chr3_4:75228784-75228803 | None:intergenic | 35.0% |
| ! | GATTATTCCAAACGCGTTTT+TGG | - | chr3_4:75228786-75228805 | None:intergenic | 35.0% |
| ! | GATTGTTCAAGTTTGGAGAT+GGG | - | chr3_4:75228808-75228827 | None:intergenic | 35.0% |
| ! | TGATTGTTCAAGTTTGGAGA+TGG | - | chr3_4:75228809-75228828 | None:intergenic | 35.0% |
| ACAAAACCTATCTCAATTGC+TGG | + | chr3_4:75228929-75228948 | Msa0522160:CDS | 35.0% | |
| TCTCAATCGTAACACTGAAT+TGG | + | chr3_4:75228967-75228986 | Msa0522160:CDS | 35.0% | |
| !!! | TTCAGTTTTTGGTTGATTCG+GGG | + | chr3_4:75229084-75229103 | Msa0522160:intron | 35.0% |
| AGAAATAAGTGACCTGATCA+AGG | - | chr3_4:75229160-75229179 | None:intergenic | 35.0% | |
| CGATAGATTAATGCTTGTTC+AGG | + | chr3_4:75229601-75229620 | Msa0522160:intron | 35.0% | |
| !! | AATGCCGTCATTTTCACTTT+TGG | + | chr3_4:75229848-75229867 | Msa0522160:CDS | 35.0% |
| AGAGCCAAAAGTGAAAATGA+CGG | - | chr3_4:75229855-75229874 | None:intergenic | 35.0% | |
| ! | TTTTCACAATATGCAAGCAC+TGG | - | chr3_4:75229920-75229939 | None:intergenic | 35.0% |
| TAATGGTAGGAACTTAAAGC+AGG | + | chr3_4:75230054-75230073 | Msa0522160:intron | 35.0% | |
| ATAATAATACCACCTCTCAC+GGG | + | chr3_4:75230157-75230176 | Msa0522160:intron | 35.0% | |
| TTGTTGGAAATAAACTCACC+AGG | - | chr3_4:75230207-75230226 | None:intergenic | 35.0% | |
| GAGGTCTGTAGAGTTTATAA+AGG | - | chr3_4:75230230-75230249 | None:intergenic | 35.0% | |
| CAAGAATGCACTAACCAAAA+TGG | - | chr3_4:75230455-75230474 | None:intergenic | 35.0% | |
| TTTGGTTAGTGCATTCTTGT+AGG | + | chr3_4:75230456-75230475 | Msa0522160:intron | 35.0% | |
| GTGGTTGTTCTATAAGTGTT+CGG | + | chr3_4:75230617-75230636 | Msa0522160:intron | 35.0% | |
| TAAGCATAATTGCAGGTTCA+TGG | + | chr3_4:75230657-75230676 | Msa0522160:intron | 35.0% | |
| TATCACCTCTCGATTTACAT+AGG | - | chr3_4:75230721-75230740 | None:intergenic | 35.0% | |
| CCTCCATTTAGTAAAATCCT+CGG | + | chr3_4:75230761-75230780 | Msa0522160:intron | 35.0% | |
| ! | ATGCCGAGGATTTTACTAAA+TGG | - | chr3_4:75230767-75230786 | None:intergenic | 35.0% |
| CTAAAATATAACTGATGCCG+AGG | - | chr3_4:75230781-75230800 | None:intergenic | 35.0% | |
| TAACTTCTTCCATTTCAGCA+AGG | - | chr3_4:75230853-75230872 | None:intergenic | 35.0% | |
| !! | AAGTTTGGTTCTTATTCAGC+AGG | + | chr3_4:75230985-75231004 | Msa0522160:intron | 35.0% |
| !! | AGTTTGGTTCTTATTCAGCA+GGG | + | chr3_4:75230986-75231005 | Msa0522160:intron | 35.0% |
| TCTCTTGGGTGAAGAATTTA+GGG | + | chr3_4:75231053-75231072 | Msa0522160:intron | 35.0% | |
| AATTCAAGCATGCCAAAAAC+AGG | - | chr3_4:75231197-75231216 | None:intergenic | 35.0% | |
| TGCTATATAGCATGTCTTCT+AGG | + | chr3_4:75231255-75231274 | Msa0522160:intron | 35.0% | |
| GCAGCACACTAATCTAATAT+AGG | - | chr3_4:75231330-75231349 | None:intergenic | 35.0% | |
| TATGTGTATTATGCGAACGT+TGG | - | chr3_4:75231352-75231371 | None:intergenic | 35.0% | |
| CAAACTGTTCGAAGTCTTAA+TGG | + | chr3_4:75231676-75231695 | Msa0522160:CDS | 35.0% | |
| ! | TAAACTTGTTCCAAATGTCG+AGG | + | chr3_4:75231723-75231742 | Msa0522160:CDS | 35.0% |
| !! | CGAAAGTGCTATCATTATGA+AGG | - | chr3_4:75231829-75231848 | None:intergenic | 35.0% |
| AACATAAATGCTCATGCCAT+TGG | - | chr3_4:75231947-75231966 | None:intergenic | 35.0% | |
| TCGAAATGAGGTAACAAAGA+TGG | - | chr3_4:75231971-75231990 | None:intergenic | 35.0% | |
| TACCTCATTTCGATGTGTTT+AGG | + | chr3_4:75231978-75231997 | Msa0522160:intron | 35.0% | |
| AACCTAAACACATCGAAATG+AGG | - | chr3_4:75231983-75232002 | None:intergenic | 35.0% | |
| ! | TTTCGATGTGTTTAGGTTAC+TGG | + | chr3_4:75231985-75232004 | Msa0522160:intron | 35.0% |
| ATTCCTTGGAGGAGTAAATT+GGG | + | chr3_4:75232008-75232027 | Msa0522160:CDS | 35.0% | |
| ACATACTAGGGATTGCATTA+GGG | - | chr3_4:75232065-75232084 | None:intergenic | 35.0% | |
| AACATACTAGGGATTGCATT+AGG | - | chr3_4:75232066-75232085 | None:intergenic | 35.0% | |
| TAATGCAATCCCTAGTATGT+TGG | + | chr3_4:75232065-75232084 | Msa0522160:CDS | 35.0% | |
| ACGAACTGCATTTACCTATA+TGG | + | chr3_4:75232160-75232179 | Msa0522160:CDS | 35.0% | |
| CGAACTGCATTTACCTATAT+GGG | + | chr3_4:75232161-75232180 | Msa0522160:CDS | 35.0% | |
| TTGAGCTTAACAAATCACAG+TGG | + | chr3_4:75232419-75232438 | Msa0522160:CDS | 35.0% | |
| !!! | TCAGCCATATGTCTTTTTTG+AGG | + | chr3_4:75232453-75232472 | Msa0522160:CDS | 35.0% |
| !! | GATGATTTACTTTTGTGGAG+AGG | + | chr3_4:75232520-75232539 | Msa0522160:CDS | 35.0% |
| !! | ATTTACTTTTGTGGAGAGGT+TGG | + | chr3_4:75232524-75232543 | Msa0522160:CDS | 35.0% |
| !! | TTTACTTTTGTGGAGAGGTT+GGG | + | chr3_4:75232525-75232544 | Msa0522160:CDS | 35.0% |
| CATACAAAACTGTACCTTCA+AGG | - | chr3_4:75232575-75232594 | None:intergenic | 35.0% | |
| !! | TGAAGGTACAGTTTTGTATG+AGG | + | chr3_4:75232575-75232594 | Msa0522160:intron | 35.0% |
| TATGTATGTATACTGGAAGC+CGG | + | chr3_4:75232918-75232937 | Msa0522160:CDS | 35.0% | |
| CATCTGGAAAAACAAATGCA+GGG | - | chr3_4:75232984-75233003 | None:intergenic | 35.0% | |
| GCTTAACATCCATCATTTCA+GGG | - | chr3_4:75233128-75233147 | None:intergenic | 35.0% | |
| AGTTGTACTAGTAAATTGGG+TGG | + | chr3_4:75233210-75233229 | Msa0522160:CDS | 35.0% | |
| ATACACTCGATACTCATTTG+AGG | - | chr3_4:75233240-75233259 | None:intergenic | 35.0% | |
| !! | ATGAGTATCGAGTGTATTGA+AGG | + | chr3_4:75233243-75233262 | Msa0522160:CDS | 35.0% |
| !! | TGAGTATCGAGTGTATTGAA+GGG | + | chr3_4:75233244-75233263 | Msa0522160:CDS | 35.0% |
| CTTGATTTCACAATTGCTGT+CGG | - | chr3_4:75233301-75233320 | None:intergenic | 35.0% | |
| TGTGAAATCAAGTCATCTGA+TGG | + | chr3_4:75233309-75233328 | Msa0522160:CDS | 35.0% | |
| ! | GACTTTAGAAGTTCAGAATG+AGG | + | chr3_4:75233425-75233444 | Msa0522160:CDS | 35.0% |
| TGGACACCAACTTCTAATTA+AGG | - | chr3_4:75233515-75233534 | None:intergenic | 35.0% | |
| !! | TCATTGACTCCATTCTGAAA+TGG | - | chr3_4:75233535-75233554 | None:intergenic | 35.0% |
| ATTTCAGAATGGAGTCAATG+AGG | + | chr3_4:75233534-75233553 | Msa0522160:intron | 35.0% | |
| !! | TGACTTTTGTTTGCTTGGAA+AGG | + | chr3_4:75233572-75233591 | Msa0522160:CDS | 35.0% |
| !! | GACTTTTGTTTGCTTGGAAA+GGG | + | chr3_4:75233573-75233592 | Msa0522160:CDS | 35.0% |
| CTACAAAAAGCTTGCCAAAT+TGG | + | chr3_4:75233608-75233627 | Msa0522160:CDS | 35.0% | |
| ! | GAGGTGAGTTTCTTTATTTG+AGG | + | chr3_4:75233739-75233758 | Msa0522160:intron | 35.0% |
| AGATTAGGAACAGTTATGGA+TGG | + | chr3_4:75233768-75233787 | Msa0522160:intron | 35.0% | |
| AACAAGTTATAACAAGGGAG+GGG | - | chr3_4:75234075-75234094 | None:intergenic | 35.0% | |
| AGATAGGAAGAGAAAAGGAA+CGG | - | chr3_4:75234131-75234150 | None:intergenic | 35.0% | |
| CAACAAGATAGGAAGAGAAA+AGG | - | chr3_4:75234136-75234155 | None:intergenic | 35.0% | |
| ! | CTTTTCTCTTCCTATCTTGT+TGG | + | chr3_4:75234134-75234153 | Msa0522160:intron | 35.0% |
| ATAGTAAGACCCAACAAGAT+AGG | - | chr3_4:75234147-75234166 | None:intergenic | 35.0% | |
| CCAAATTATCTTGAAGCAAG+AGG | - | chr3_4:75234192-75234211 | None:intergenic | 35.0% | |
| CCTCTTGCTTCAAGATAATT+TGG | + | chr3_4:75234189-75234208 | Msa0522160:intron | 35.0% | |
| CTCTATACACAAAACAAGTC+AGG | - | chr3_4:75234328-75234347 | None:intergenic | 35.0% | |
| !!! | GACTTGTTTTGTGTATAGAG+AGG | + | chr3_4:75234328-75234347 | Msa0522160:intron | 35.0% |
| AATGAAACAAAAGGAAGGTC+TGG | - | chr3_4:75234362-75234381 | None:intergenic | 35.0% | |
| ! | GAGTGTATAAGTTGAAGATG+AGG | + | chr3_4:75234468-75234487 | Msa0522160:intron | 35.0% |
| ! | TATAAGTTGAAGATGAGGCT+AGG | + | chr3_4:75234473-75234492 | Msa0522160:intron | 35.0% |
| ! | TTTTTGCAGAAGCTTGTGAA+AGG | + | chr3_4:75234502-75234521 | Msa0522160:intron | 35.0% |
| !!! | TTCTTTGGTTTTGGCTTTGT+AGG | + | chr3_4:75234560-75234579 | Msa0522160:intron | 35.0% |
| ! | GCTTTGTAGGAGGATAATTT+TGG | + | chr3_4:75234573-75234592 | Msa0522160:intron | 35.0% |
| !!! | TAATTTTGGAGTGCATCTCA+TGG | + | chr3_4:75234587-75234606 | Msa0522160:CDS | 35.0% |
| TGCAAAATCTTATGCTACAC+TGG | + | chr3_4:75234617-75234636 | Msa0522160:CDS | 35.0% | |
| GCAAAATCTTATGCTACACT+GGG | + | chr3_4:75234618-75234637 | Msa0522160:CDS | 35.0% | |
| CAAAATCTTATGCTACACTG+GGG | + | chr3_4:75234619-75234638 | Msa0522160:CDS | 35.0% | |
| TGAAGAGCTGATACAAACAA+TGG | + | chr3_4:75234692-75234711 | Msa0522160:three_prime_UTR | 35.0% | |
| AATGGAGGCTAATCAGATTA+AGG | + | chr3_4:75234710-75234729 | Msa0522160:three_prime_UTR | 35.0% | |
| ! | GGCTAATCAGATTAAGGTTT+TGG | + | chr3_4:75234716-75234735 | Msa0522160:three_prime_UTR | 35.0% |
| TACATTGATGAACAGCATGA+TGG | + | chr3_4:75234763-75234782 | Msa0522160:three_prime_UTR | 35.0% | |
| !! | GATGGAGATGCTTTAAAATG+CGG | + | chr3_4:75234781-75234800 | Msa0522160:three_prime_UTR | 35.0% |
| CGCCCTATTGTATATAAAAC+AGG | + | chr3_4:75234807-75234826 | Msa0522160:three_prime_UTR | 35.0% | |
| ! | GCCCCTGTTTTATATACAAT+AGG | - | chr3_4:75234813-75234832 | None:intergenic | 35.0% |
| !! | ATGATGGATGTATCAATCAC+AGG | - | chr3_4:75234933-75234952 | None:intergenic | 35.0% |
| !!! | ATTTTTGGCGGCATTGAATT+TGG | + | chr3_4:75235020-75235039 | Msa0522160:three_prime_UTR | 35.0% |
| !! | AAACGCGTTTTTGGGGAATT+GGG | - | chr3_4:75228777-75228796 | None:intergenic | 40.0% |
| ! | GGAAGCTGATTGTTCAAGTT+TGG | - | chr3_4:75228815-75228834 | None:intergenic | 40.0% |
| CAATCAGCTTCCAACGATAA+TGG | + | chr3_4:75228823-75228842 | Msa0522160:exon | 40.0% | |
| !! | TTGTTGGCTTGTTCTTGTTG+TGG | - | chr3_4:75228899-75228918 | None:intergenic | 40.0% |
| GTTACGATTGAGATCAGCTT+CGG | - | chr3_4:75228960-75228979 | None:intergenic | 40.0% | |
| TCGTAACACTGAATTGGAGA+AGG | + | chr3_4:75228973-75228992 | Msa0522160:CDS | 40.0% | |
| AACACTGAATTGGAGAAGGT+TGG | + | chr3_4:75228977-75228996 | Msa0522160:intron | 40.0% | |
| AATAAGTGACCTGATCAAGG+CGG | - | chr3_4:75229157-75229176 | None:intergenic | 40.0% | |
| CAATGTGACACATTGTCGAA+CGG | + | chr3_4:75229539-75229558 | Msa0522160:intron | 40.0% | |
| AATGTGACACATTGTCGAAC+GGG | + | chr3_4:75229540-75229559 | Msa0522160:intron | 40.0% | |
| GTGTATCGAAGAACAATGTC+AGG | + | chr3_4:75229573-75229592 | Msa0522160:intron | 40.0% | |
| ATTATAGTACCGTTGGCGTT+GGG | - | chr3_4:75229646-75229665 | None:intergenic | 40.0% | |
| CAACGGTACTATAATGCGAT+GGG | + | chr3_4:75229651-75229670 | Msa0522160:intron | 40.0% | |
| AACGGTACTATAATGCGATG+GGG | + | chr3_4:75229652-75229671 | Msa0522160:intron | 40.0% | |
| !! | TTTATTCGTGTAGTGGACTG+AGG | + | chr3_4:75229696-75229715 | Msa0522160:intron | 40.0% |
| AATGCAGATCGTGAAAAGCT+GGG | + | chr3_4:75229772-75229791 | Msa0522160:intron | 40.0% | |
| ACTGGAAGGATCAAGGAAAA+AGG | - | chr3_4:75229902-75229921 | None:intergenic | 40.0% | |
| ! | TCTCCTGATTATTTGGAGTC+TGG | + | chr3_4:75229968-75229987 | Msa0522160:intron | 40.0% |
| ! | CGGGACACCTGATATATTTT+TGG | + | chr3_4:75230176-75230195 | Msa0522160:intron | 40.0% |
| TTCAAAACTCTACAGACCCT+GGG | - | chr3_4:75230269-75230288 | None:intergenic | 40.0% | |
| AGTCACTGTCAACAAATGAC+TGG | + | chr3_4:75230333-75230352 | Msa0522160:intron | 40.0% | |
| ACTGTCAACAAATGACTGGT+AGG | + | chr3_4:75230337-75230356 | Msa0522160:intron | 40.0% | |
| GAATGCACTAACCAAAATGG+AGG | - | chr3_4:75230452-75230471 | None:intergenic | 40.0% | |
| GACATAGACACTTTGTGCAT+CGG | + | chr3_4:75230690-75230709 | Msa0522160:CDS | 40.0% | |
| TCCTTCCTATGTAAATCGAG+AGG | + | chr3_4:75230713-75230732 | Msa0522160:CDS | 40.0% | |
| ACCTCTCGATTTACATAGGA+AGG | - | chr3_4:75230717-75230736 | None:intergenic | 40.0% | |
| ! | CCGAGGATTTTACTAAATGG+AGG | - | chr3_4:75230764-75230783 | None:intergenic | 40.0% |
| GTCTCTTGGGTGAAGAATTT+AGG | + | chr3_4:75231052-75231071 | Msa0522160:intron | 40.0% | |
| ! | TTGAGTTTTCTTGGGGTGTA+TGG | + | chr3_4:75231110-75231129 | Msa0522160:intron | 40.0% |
| CAGTACACAGAATGAAGACA+TGG | - | chr3_4:75231148-75231167 | None:intergenic | 40.0% | |
| TAAGAATTTGATCCGCCACT+CGG | - | chr3_4:75231705-75231724 | None:intergenic | 40.0% | |
| !!! | AAGTTTTGGGCTAAAAGACG+TGG | + | chr3_4:75231868-75231887 | Msa0522160:CDS | 40.0% |
| ! | GTTTAGGTTACTGGATTCCT+TGG | + | chr3_4:75231994-75232013 | Msa0522160:intron | 40.0% |
| GATTCCTTGGAGGAGTAAAT+TGG | + | chr3_4:75232007-75232026 | Msa0522160:CDS | 40.0% | |
| !! | TCTTTAGGGTCTATTCACAG+TGG | + | chr3_4:75232097-75232116 | Msa0522160:CDS | 40.0% |
| CTATAGGGCATAGCATTACA+GGG | - | chr3_4:75232134-75232153 | None:intergenic | 40.0% | |
| TCTATAGGGCATAGCATTAC+AGG | - | chr3_4:75232135-75232154 | None:intergenic | 40.0% | |
| GCAGTTCGTTCTCTTCTATA+GGG | - | chr3_4:75232149-75232168 | None:intergenic | 40.0% | |
| TGCAGTTCGTTCTCTTCTAT+AGG | - | chr3_4:75232150-75232169 | None:intergenic | 40.0% | |
| TAATGTGATACCTGTCCCTA+TGG | - | chr3_4:75232200-75232219 | None:intergenic | 40.0% | |
| GGGTATGCAGGAGTAATTAT+TGG | - | chr3_4:75232225-75232244 | None:intergenic | 40.0% | |
| TGTAGCTGGAATTCATGCAA+GGG | - | chr3_4:75232245-75232264 | None:intergenic | 40.0% | |
| TTGTAGCTGGAATTCATGCA+AGG | - | chr3_4:75232246-75232265 | None:intergenic | 40.0% | |
| AAGCACTCTTCGTGTTATGA+TGG | + | chr3_4:75232275-75232294 | Msa0522160:CDS | 40.0% | |
| ! | ATGATGGAACAGTTCTGCTA+TGG | + | chr3_4:75232291-75232310 | Msa0522160:CDS | 40.0% |
| TAGTTCATGTCTCATGTCTG+CGG | + | chr3_4:75232616-75232635 | Msa0522160:intron | 40.0% | |
| AGATAGAGCGAGATACAAGT+GGG | + | chr3_4:75232731-75232750 | Msa0522160:intron | 40.0% | |
| TCTGCATACTCATGTGGATA+AGG | - | chr3_4:75232772-75232791 | None:intergenic | 40.0% | |
| AAAAATGCAGAATGCGCACA+AGG | - | chr3_4:75232805-75232824 | None:intergenic | 40.0% | |
| ! | TGCGCATTCTGCATTTTTCA+TGG | + | chr3_4:75232807-75232826 | Msa0522160:CDS | 40.0% |
| ! | GCGCATTCTGCATTTTTCAT+GGG | + | chr3_4:75232808-75232827 | Msa0522160:CDS | 40.0% |
| ATGGGCTTGCAAAGAAAAGA+GGG | + | chr3_4:75232826-75232845 | Msa0522160:CDS | 40.0% | |
| CAAAGAAAAGAGGGAGTAAG+AGG | + | chr3_4:75232835-75232854 | Msa0522160:CDS | 40.0% | |
| ATGTATGTATACTGGAAGCC+GGG | + | chr3_4:75232919-75232938 | Msa0522160:CDS | 40.0% | |
| CCATCTGGAAAAACAAATGC+AGG | - | chr3_4:75232985-75233004 | None:intergenic | 40.0% | |
| !! | CCTGCATTTGTTTTTCCAGA+TGG | + | chr3_4:75232982-75233001 | Msa0522160:CDS | 40.0% |
| GAAGAAGAACCCTGAAATGA+TGG | + | chr3_4:75233116-75233135 | Msa0522160:CDS | 40.0% | |
| GGCTTAACATCCATCATTTC+AGG | - | chr3_4:75233129-75233148 | None:intergenic | 40.0% | |
| !! | GAGTATCGAGTGTATTGAAG+GGG | + | chr3_4:75233245-75233264 | Msa0522160:CDS | 40.0% |
| AGTGGTACAATTACTGACGT+AGG | + | chr3_4:75233342-75233361 | Msa0522160:CDS | 40.0% | |
| !! | TTGTTGACTCCACTCATGAT+AGG | + | chr3_4:75233391-75233410 | Msa0522160:CDS | 40.0% |
| TGATTTCAGCCTATCATGAG+TGG | - | chr3_4:75233403-75233422 | None:intergenic | 40.0% | |
| CTCATGATAGGCTGAAATCA+AGG | + | chr3_4:75233403-75233422 | Msa0522160:CDS | 40.0% | |
| TGAACCAAACAACTTCCGAA+GGG | - | chr3_4:75233483-75233502 | None:intergenic | 40.0% | |
| ATGAACCAAACAACTTCCGA+AGG | - | chr3_4:75233484-75233503 | None:intergenic | 40.0% | |
| ! | AGTTGGTGTCCATTTCAGAA+TGG | + | chr3_4:75233523-75233542 | Msa0522160:intron | 40.0% |
| !! | GGACATGACTTTTGTTTGCT+TGG | + | chr3_4:75233567-75233586 | Msa0522160:CDS | 40.0% |
| TTTCACAAGGGCAGAATGTA+CGG | + | chr3_4:75233678-75233697 | Msa0522160:CDS | 40.0% | |
| TCTGAGAGATAGTGAGAGTA+AGG | + | chr3_4:75233813-75233832 | Msa0522160:CDS | 40.0% | |
| CTGAGAGATAGTGAGAGTAA+GGG | + | chr3_4:75233814-75233833 | Msa0522160:CDS | 40.0% | |
| CTCTCTATTCAGAACTGATC+AGG | - | chr3_4:75233872-75233891 | None:intergenic | 40.0% | |
| TGGAAACATAGCACGTATAG+TGG | - | chr3_4:75234288-75234307 | None:intergenic | 40.0% | |
| AGGTTGTTAAGCACAGTTAC+TGG | - | chr3_4:75234308-75234327 | None:intergenic | 40.0% | |
| GTATAGACAGATGTCAGACT+CGG | + | chr3_4:75234445-75234464 | Msa0522160:intron | 40.0% | |
| TATAGACAGATGTCAGACTC+GGG | + | chr3_4:75234446-75234465 | Msa0522160:intron | 40.0% | |
| !!! | TTTGGTTTTGGCTTTGTAGG+AGG | + | chr3_4:75234563-75234582 | Msa0522160:intron | 40.0% |
| AGAGCTGATACAAACAATGG+AGG | + | chr3_4:75234695-75234714 | Msa0522160:three_prime_UTR | 40.0% | |
| !!! | GGTTTTGGAGAGTTTTGGAA+TGG | + | chr3_4:75234731-75234750 | Msa0522160:three_prime_UTR | 40.0% |
| TAACATATTTGCGTACCCAG+AGG | + | chr3_4:75234870-75234889 | Msa0522160:three_prime_UTR | 40.0% | |
| !! | TTTGTTGTTTGCTTGCGATG+TGG | + | chr3_4:75234900-75234919 | Msa0522160:three_prime_UTR | 40.0% |
| AAGGAAGAGACAGGTGTGAT+TGG | + | chr3_4:75228659-75228678 | Msa0522160:five_prime_UTR | 45.0% | |
| AAGAGACAGGTGTGATTGGT+TGG | + | chr3_4:75228663-75228682 | Msa0522160:five_prime_UTR | 45.0% | |
| !! | AGAAAGTCAAGGGAGCGTTT+GGG | - | chr3_4:75228745-75228764 | None:intergenic | 45.0% |
| GGTTTGGAGGAGAAAGTCAA+GGG | - | chr3_4:75228755-75228774 | None:intergenic | 45.0% | |
| !! | GTTTTTGGGGAATTGGGGTT+TGG | - | chr3_4:75228771-75228790 | None:intergenic | 45.0% |
| !! | AACGCGTTTTTGGGGAATTG+GGG | - | chr3_4:75228776-75228795 | None:intergenic | 45.0% |
| !! | CAAACGCGTTTTTGGGGAAT+TGG | - | chr3_4:75228778-75228797 | None:intergenic | 45.0% |
| CAATTCCCCAAAAACGCGTT+TGG | + | chr3_4:75228776-75228795 | Msa0522160:five_prime_UTR | 45.0% | |
| ! | TCAGCTTCCAACGATAATGG+TGG | + | chr3_4:75228826-75228845 | Msa0522160:exon | 45.0% |
| TCGGAAACCACCATTATCGT+TGG | - | chr3_4:75228836-75228855 | None:intergenic | 45.0% | |
| !! | TTGGCTTGTTCTTGTTGTGG+CGG | - | chr3_4:75228896-75228915 | None:intergenic | 45.0% |
| AGAAGCTGCAAGTAGAGAAG+AGG | + | chr3_4:75229124-75229143 | Msa0522160:CDS | 45.0% | |
| CGTTCGACAATGTGTCACAT+TGG | - | chr3_4:75229541-75229560 | None:intergenic | 45.0% | |
| ATGTGACACATTGTCGAACG+GGG | + | chr3_4:75229541-75229560 | Msa0522160:intron | 45.0% | |
| TTATAGTACCGTTGGCGTTG+GGG | - | chr3_4:75229645-75229664 | None:intergenic | 45.0% | |
| CATTATAGTACCGTTGGCGT+TGG | - | chr3_4:75229647-75229666 | None:intergenic | 45.0% | |
| CCATCGCATTATAGTACCGT+TGG | - | chr3_4:75229653-75229672 | None:intergenic | 45.0% | |
| CCAACGGTACTATAATGCGA+TGG | + | chr3_4:75229650-75229669 | Msa0522160:intron | 45.0% | |
| GTACTATAATGCGATGGGGA+TGG | + | chr3_4:75229656-75229675 | Msa0522160:intron | 45.0% | |
| ! | CTTTTCACGATCTGCATTGC+AGG | - | chr3_4:75229770-75229789 | None:intergenic | 45.0% |
| CAATGCAGATCGTGAAAAGC+TGG | + | chr3_4:75229771-75229790 | Msa0522160:intron | 45.0% | |
| CTACACAGATCAGATGGTTG+AGG | + | chr3_4:75229820-75229839 | Msa0522160:CDS | 45.0% | |
| !!! | ACTTTTGGCTCTTACCGACT+AGG | + | chr3_4:75229863-75229882 | Msa0522160:CDS | 45.0% |
| !!! | CTTTTGGCTCTTACCGACTA+GGG | + | chr3_4:75229864-75229883 | Msa0522160:CDS | 45.0% |
| !!! | TTTTGGCTCTTACCGACTAG+GGG | + | chr3_4:75229865-75229884 | Msa0522160:CDS | 45.0% |
| !! | CACAATATGCAAGCACTGGA+AGG | - | chr3_4:75229916-75229935 | None:intergenic | 45.0% |
| CCTCCAGACTCCAAATAATC+AGG | - | chr3_4:75229974-75229993 | None:intergenic | 45.0% | |
| ! | CCTGATTATTTGGAGTCTGG+AGG | + | chr3_4:75229971-75229990 | Msa0522160:intron | 45.0% |
| TGGTAGGAACTTAAAGCAGG+AGG | + | chr3_4:75230057-75230076 | Msa0522160:intron | 45.0% | |
| CTTCAAAACTCTACAGACCC+TGG | - | chr3_4:75230270-75230289 | None:intergenic | 45.0% | |
| GTCAACAAATGACTGGTAGG+CGG | + | chr3_4:75230340-75230359 | Msa0522160:intron | 45.0% | |
| CACTAACCAAAATGGAGGAG+GGG | - | chr3_4:75230447-75230466 | None:intergenic | 45.0% | |
| GCACTAACCAAAATGGAGGA+GGG | - | chr3_4:75230448-75230467 | None:intergenic | 45.0% | |
| TGCACTAACCAAAATGGAGG+AGG | - | chr3_4:75230449-75230468 | None:intergenic | 45.0% | |
| TAATTGCAGGTTCATGGACC+TGG | + | chr3_4:75230663-75230682 | Msa0522160:intron | 45.0% | |
| ! | AAAGTGTCTATGTCCACTCC+AGG | - | chr3_4:75230684-75230703 | None:intergenic | 45.0% |
| GCACAACATCCTTGCTGAAA+TGG | + | chr3_4:75230841-75230860 | Msa0522160:CDS | 45.0% | |
| ATTACTGGGACATGTGCATC+AGG | - | chr3_4:75230893-75230912 | None:intergenic | 45.0% | |
| GGTTGTGCCAGAAGTAAGTT+TGG | + | chr3_4:75230970-75230989 | Msa0522160:intron | 45.0% | |
| TGGCATAGCGGTAACAGATA+TGG | - | chr3_4:75231469-75231488 | None:intergenic | 45.0% | |
| GGCATAAATGGATGGCATAG+CGG | - | chr3_4:75231481-75231500 | None:intergenic | 45.0% | |
| ATACACTTATCCACAGGACC+TGG | + | chr3_4:75231615-75231634 | Msa0522160:intron | 45.0% | |
| AAGTCTTAATGGTTGCCGAG+TGG | + | chr3_4:75231687-75231706 | Msa0522160:CDS | 45.0% | |
| TAGGTTACTGGATTCCTTGG+AGG | + | chr3_4:75231997-75232016 | Msa0522160:intron | 45.0% | |
| TAGCCCAATTTACTCCTCCA+AGG | - | chr3_4:75232014-75232033 | None:intergenic | 45.0% | |
| GGATTGCATTAGGGTAAAGC+TGG | - | chr3_4:75232056-75232075 | None:intergenic | 45.0% | |
| TTAGGGTCTATTCACAGTGG+CGG | + | chr3_4:75232100-75232119 | Msa0522160:CDS | 45.0% | |
| TTTCTGCGAGGATCCCATAT+AGG | - | chr3_4:75232177-75232196 | None:intergenic | 45.0% | |
| ! | GAATTCATGCAAGGGTATGC+AGG | - | chr3_4:75232237-75232256 | None:intergenic | 45.0% |
| ! | TCAAGGTTAGCTGTCTTAGC+CGG | - | chr3_4:75232558-75232577 | None:intergenic | 45.0% |
| GCTAAGACAGCTAACCTTGA+AGG | + | chr3_4:75232558-75232577 | Msa0522160:CDS | 45.0% | |
| CAGATAGAGCGAGATACAAG+TGG | + | chr3_4:75232730-75232749 | Msa0522160:intron | 45.0% | |
| CATGGGCTTGCAAAGAAAAG+AGG | + | chr3_4:75232825-75232844 | Msa0522160:CDS | 45.0% | |
| GGACAGCAGTTTGATATACG+TGG | + | chr3_4:75232865-75232884 | Msa0522160:CDS | 45.0% | |
| GCCTAGGCATATAAACCATG+CGG | + | chr3_4:75233023-75233042 | Msa0522160:CDS | 45.0% | |
| AAACCATGCGGCTGAGAAAA+TGG | + | chr3_4:75233035-75233054 | Msa0522160:CDS | 45.0% | |
| AACCATGCGGCTGAGAAAAT+GGG | + | chr3_4:75233036-75233055 | Msa0522160:CDS | 45.0% | |
| GATACGACAAAGTGCAACTC+TGG | + | chr3_4:75233063-75233082 | Msa0522160:CDS | 45.0% | |
| ! | CTTCTGAAAGGTCCATCAAG+AGG | + | chr3_4:75233094-75233113 | Msa0522160:CDS | 45.0% |
| AGGGTTCTTCTTCCTCTTGA+TGG | - | chr3_4:75233109-75233128 | None:intergenic | 45.0% | |
| AGCCAGATAAACCAGAGAAG+CGG | + | chr3_4:75233145-75233164 | Msa0522160:CDS | 45.0% | |
| AAACACACTCTAGCCTCTGT+GGG | - | chr3_4:75233182-75233201 | None:intergenic | 45.0% | |
| TCGAGTGTATTGAAGGGGTT+AGG | + | chr3_4:75233250-75233269 | Msa0522160:CDS | 45.0% | |
| ATTGAAGGGGTTAGGCTAGA+TGG | + | chr3_4:75233258-75233277 | Msa0522160:CDS | 45.0% | |
| !! | AAGTCATCTGATGGACTCTC+AGG | + | chr3_4:75233318-75233337 | Msa0522160:CDS | 45.0% |
| TAAGAAGCCTGCTGAATCAG+CGG | + | chr3_4:75233448-75233467 | Msa0522160:intron | 45.0% | |
| GAGTCAATGAGGACAAAGCT+CGG | + | chr3_4:75233545-75233564 | Msa0522160:CDS | 45.0% | |
| AGTCAATGAGGACAAAGCTC+GGG | + | chr3_4:75233546-75233565 | Msa0522160:CDS | 45.0% | |
| AAGCTTGCCAAATTGGGAAG+AGG | + | chr3_4:75233615-75233634 | Msa0522160:CDS | 45.0% | |
| AGCTTGCCAAATTGGGAAGA+GGG | + | chr3_4:75233616-75233635 | Msa0522160:CDS | 45.0% | |
| AGAAACTCACCTCGCAATTG+AGG | - | chr3_4:75233732-75233751 | None:intergenic | 45.0% | |
| AGAGTAAGGGAACTTTGCAG+AGG | + | chr3_4:75233827-75233846 | Msa0522160:CDS | 45.0% | |
| GAGTAAGGGAACTTTGCAGA+GGG | + | chr3_4:75233828-75233847 | Msa0522160:CDS | 45.0% | |
| ! | TTGCAGAGGGTGATGTTTTG+TGG | + | chr3_4:75233841-75233860 | Msa0522160:intron | 45.0% |
| ATGGTGGCTGAAGAAGTTGA+AGG | + | chr3_4:75233905-75233924 | Msa0522160:intron | 45.0% | |
| ! | TAACCTCTCTGTTTTCTCCG+TGG | + | chr3_4:75233940-75233959 | Msa0522160:intron | 45.0% |
| TTACCACGGAGAAAACAGAG+AGG | - | chr3_4:75233946-75233965 | None:intergenic | 45.0% | |
| GTTTCTGACCGGTGAATATG+TGG | + | chr3_4:75234248-75234267 | Msa0522160:intron | 45.0% | |
| ACAAAAGGAAGGTCTGGTCT+CGG | - | chr3_4:75234356-75234375 | None:intergenic | 45.0% | |
| !! | TGTTGCTTTGCTGAGGTACT+GGG | + | chr3_4:75234643-75234662 | Msa0522160:exon | 45.0% |
| !! | TTTGCTGAGGTACTGGGAAT+GGG | + | chr3_4:75234649-75234668 | Msa0522160:exon | 45.0% |
| ATATTTGCGTACCCAGAGGT+GGG | + | chr3_4:75234874-75234893 | Msa0522160:three_prime_UTR | 45.0% | |
| ACAACAAAGTTCCCACCTCT+GGG | - | chr3_4:75234888-75234907 | None:intergenic | 45.0% | |
| AACAACAAAGTTCCCACCTC+TGG | - | chr3_4:75234889-75234908 | None:intergenic | 45.0% | |
| TCAATCTGCAGCGATTTCGT+TGG | + | chr3_4:75235064-75235083 | Msa0522160:three_prime_UTR | 45.0% | |
| !!! | TTAAAAAAATATTTTTTGAA+GGG | - | chr3_4:75229503-75229522 | None:intergenic | 5.0% |
| !!! | ATTAAAAAAATATTTTTTGA+AGG | - | chr3_4:75229504-75229523 | None:intergenic | 5.0% |
| ! | ACAGGTGTGATTGGTTGGAG+TGG | + | chr3_4:75228668-75228687 | Msa0522160:five_prime_UTR | 50.0% |
| ! | CAGGTGTGATTGGTTGGAGT+GGG | + | chr3_4:75228669-75228688 | Msa0522160:five_prime_UTR | 50.0% |
| !! | GAGAAAGTCAAGGGAGCGTT+TGG | - | chr3_4:75228746-75228765 | None:intergenic | 50.0% |
| GGGTTTGGAGGAGAAAGTCA+AGG | - | chr3_4:75228756-75228775 | None:intergenic | 50.0% | |
| TTTGGGGAATTGGGGTTTGG+AGG | - | chr3_4:75228768-75228787 | None:intergenic | 50.0% | |
| GATTGAGATCAGCTTCGGTG+GGG | - | chr3_4:75228955-75228974 | None:intergenic | 50.0% | |
| CGATTGAGATCAGCTTCGGT+GGG | - | chr3_4:75228956-75228975 | None:intergenic | 50.0% | |
| ACGATTGAGATCAGCTTCGG+TGG | - | chr3_4:75228957-75228976 | None:intergenic | 50.0% | |
| TGAGACTGATTGTGGGACAG+GGG | - | chr3_4:75229355-75229374 | None:intergenic | 50.0% | |
| GTGAGACTGATTGTGGGACA+GGG | - | chr3_4:75229356-75229375 | None:intergenic | 50.0% | |
| TGTGAGACTGATTGTGGGAC+AGG | - | chr3_4:75229357-75229376 | None:intergenic | 50.0% | |
| TTCTTCAACCCCAACGCCAA+CGG | + | chr3_4:75229634-75229653 | Msa0522160:intron | 50.0% | |
| TCTGATCTGTGTAGCCTCGT+TGG | - | chr3_4:75229814-75229833 | None:intergenic | 50.0% | |
| ACGAGGCTACACAGATCAGA+TGG | + | chr3_4:75229814-75229833 | Msa0522160:CDS | 50.0% | |
| GTAACAGACTCACCCCTAGT+CGG | - | chr3_4:75229880-75229899 | None:intergenic | 50.0% | |
| !! | TGCAAGCACTGGAAGGATCA+AGG | - | chr3_4:75229909-75229928 | None:intergenic | 50.0% |
| TATATCAGGTGTCCCGTGAG+AGG | - | chr3_4:75230172-75230191 | None:intergenic | 50.0% | |
| AACCAAAATGGAGGAGGGGA+GGG | - | chr3_4:75230443-75230462 | None:intergenic | 50.0% | |
| TAACCAAAATGGAGGAGGGG+AGG | - | chr3_4:75230444-75230463 | None:intergenic | 50.0% | |
| GAGAGGTGATATACTGCAGC+TGG | + | chr3_4:75230730-75230749 | Msa0522160:intron | 50.0% | |
| !! | CATGTATAGTGGGTGTCGAG+GGG | - | chr3_4:75231237-75231256 | None:intergenic | 50.0% |
| !! | GCATGTATAGTGGGTGTCGA+GGG | - | chr3_4:75231238-75231257 | None:intergenic | 50.0% |
| !! | AGCATGTATAGTGGGTGTCG+AGG | - | chr3_4:75231239-75231258 | None:intergenic | 50.0% |
| ! | TCTGAGATATCCAGGTCCTG+TGG | - | chr3_4:75231628-75231647 | None:intergenic | 50.0% |
| CAGGACCTGGATATCTCAGA+CGG | + | chr3_4:75231628-75231647 | Msa0522160:intron | 50.0% | |
| TCTTAATGGTTGCCGAGTGG+CGG | + | chr3_4:75231690-75231709 | Msa0522160:CDS | 50.0% | |
| GGGCATAGCATTACAGGGTT+TGG | - | chr3_4:75232129-75232148 | None:intergenic | 50.0% | |
| GGATCCTCGCAGAAACCATA+GGG | + | chr3_4:75232182-75232201 | Msa0522160:CDS | 50.0% | |
| GCTTGTCGAGACATTGTAGC+TGG | - | chr3_4:75232259-75232278 | None:intergenic | 50.0% | |
| ! | CAAGGTTAGCTGTCTTAGCC+GGG | - | chr3_4:75232557-75232576 | None:intergenic | 50.0% |
| GACGTGTCTGCATACTCATG+TGG | - | chr3_4:75232778-75232797 | None:intergenic | 50.0% | |
| AGAGGGAGTAAGAGGTCAAG+AGG | + | chr3_4:75232843-75232862 | Msa0522160:CDS | 50.0% | |
| GAGGGAGTAAGAGGTCAAGA+GGG | + | chr3_4:75232844-75232863 | Msa0522160:CDS | 50.0% | |
| TGTATACTGGAAGCCGGGAA+TGG | + | chr3_4:75232924-75232943 | Msa0522160:CDS | 50.0% | |
| CGAGTGCGTTTGTAACCATC+TGG | - | chr3_4:75233000-75233019 | None:intergenic | 50.0% | |
| ACAAACGCACTCGAATGCCT+AGG | + | chr3_4:75233007-75233026 | Msa0522160:CDS | 50.0% | |
| GCCGCATGGTTTATATGCCT+AGG | - | chr3_4:75233027-75233046 | None:intergenic | 50.0% | |
| CTGGATCCAGCTCTTCTGAA+AGG | + | chr3_4:75233082-75233101 | Msa0522160:CDS | 50.0% | |
| GATGGACCTTTCAGAAGAGC+TGG | - | chr3_4:75233091-75233110 | None:intergenic | 50.0% | |
| ! | GTCCGCTTCTCTGGTTTATC+TGG | - | chr3_4:75233150-75233169 | None:intergenic | 50.0% |
| CTAACAGATGTCCGCTTCTC+TGG | - | chr3_4:75233159-75233178 | None:intergenic | 50.0% | |
| GAAACACACTCTAGCCTCTG+TGG | - | chr3_4:75233183-75233202 | None:intergenic | 50.0% | |
| !! | TCTGATGGACTCTCAGGAAG+TGG | + | chr3_4:75233324-75233343 | Msa0522160:CDS | 50.0% |
| AAGAAGCCTGCTGAATCAGC+GGG | + | chr3_4:75233449-75233468 | Msa0522160:intron | 50.0% | |
| CCAAACAACTTCCGAAGGGA+AGG | - | chr3_4:75233479-75233498 | None:intergenic | 50.0% | |
| CCTTCCCTTCGGAAGTTGTT+TGG | + | chr3_4:75233476-75233495 | Msa0522160:intron | 50.0% | |
| ACAGCACCCTCTTCCCAATT+TGG | - | chr3_4:75233625-75233644 | None:intergenic | 50.0% | |
| CACCTCGCAATTGAGGTTCT+GGG | - | chr3_4:75233725-75233744 | None:intergenic | 50.0% | |
| TCACCTCGCAATTGAGGTTC+TGG | - | chr3_4:75233726-75233745 | None:intergenic | 50.0% | |
| ACCTGCGACCACATATTCAC+CGG | - | chr3_4:75234259-75234278 | None:intergenic | 50.0% | |
| !! | CTGTTGCTTTGCTGAGGTAC+TGG | + | chr3_4:75234642-75234661 | Msa0522160:exon | 50.0% |
| !! | CTTTGCTGAGGTACTGGGAA+TGG | + | chr3_4:75234648-75234667 | Msa0522160:exon | 50.0% |
| CATATTTGCGTACCCAGAGG+TGG | + | chr3_4:75234873-75234892 | Msa0522160:three_prime_UTR | 50.0% | |
| GTTTGCTTGCGATGTGGATG+TGG | + | chr3_4:75234906-75234925 | Msa0522160:three_prime_UTR | 50.0% | |
| GTGGTTTCCGACAGCCCTAA+CGG | + | chr3_4:75228845-75228864 | Msa0522160:CDS | 55.0% | |
| GAGGTGTAGAGCCACCGTTA+GGG | - | chr3_4:75228862-75228881 | None:intergenic | 55.0% | |
| ! | TTGTTCTTGTTGTGGCGGCG+GGG | - | chr3_4:75228891-75228910 | None:intergenic | 55.0% |
| ! | CTTGTTCTTGTTGTGGCGGC+GGG | - | chr3_4:75228892-75228911 | None:intergenic | 55.0% |
| ! | GCTTGTTCTTGTTGTGGCGG+CGG | - | chr3_4:75228893-75228912 | None:intergenic | 55.0% |
| GTGGGGCCAGCAATTGAGAT+AGG | - | chr3_4:75228938-75228957 | None:intergenic | 55.0% | |
| GAGACTGATTGTGGGACAGG+GGG | - | chr3_4:75229354-75229373 | None:intergenic | 55.0% | |
| TGACACATTGTCGAACGGGG+TGG | + | chr3_4:75229544-75229563 | Msa0522160:intron | 55.0% | |
| GACACATTGTCGAACGGGGT+GGG | + | chr3_4:75229545-75229564 | Msa0522160:intron | 55.0% | |
| ACACATTGTCGAACGGGGTG+GGG | + | chr3_4:75229546-75229565 | Msa0522160:intron | 55.0% | |
| ATCTGTGTAGCCTCGTTGGC+GGG | - | chr3_4:75229810-75229829 | None:intergenic | 55.0% | |
| GATCTGTGTAGCCTCGTTGG+CGG | - | chr3_4:75229811-75229830 | None:intergenic | 55.0% | |
| ! | TTCCCTCCCCTCCTCCATTT+TGG | + | chr3_4:75230438-75230457 | Msa0522160:intron | 55.0% |
| GGGACATGTGCATCAGGTAC+TGG | - | chr3_4:75230887-75230906 | None:intergenic | 55.0% | |
| ! | CGGAACCGTCTGAGATATCC+AGG | - | chr3_4:75231636-75231655 | None:intergenic | 55.0% |
| GGGATCCTCGCAGAAACCAT+AGG | + | chr3_4:75232181-75232200 | Msa0522160:CDS | 55.0% | |
| CTGTCCCTATGGTTTCTGCG+AGG | - | chr3_4:75232189-75232208 | None:intergenic | 55.0% | |
| CTCGCAGAAACCATAGGGAC+AGG | + | chr3_4:75232187-75232206 | Msa0522160:CDS | 55.0% | |
| GGAGAGGTTGGGTAGAATCC+CGG | + | chr3_4:75232536-75232555 | Msa0522160:CDS | 55.0% | |
| TGCAGAATGCGCACAAGGCT+TGG | - | chr3_4:75232800-75232819 | None:intergenic | 55.0% | |
| ! | CACCCATTTTCTCAGCCGCA+TGG | - | chr3_4:75233041-75233060 | None:intergenic | 55.0% |
| GGACATCTGTTAGCCCACAG+AGG | + | chr3_4:75233166-75233185 | Msa0522160:CDS | 55.0% | |
| !! | AGGTTCTGGGTGCTGGCAAT+TGG | - | chr3_4:75233712-75233731 | None:intergenic | 55.0% |
| !! | GCAATTGAGGTTCTGGGTGC+TGG | - | chr3_4:75233719-75233738 | None:intergenic | 55.0% |
| CACCCAGAACCTCAATTGCG+AGG | + | chr3_4:75233720-75233739 | Msa0522160:CDS | 55.0% | |
| ACCGGTGAATATGTGGTCGC+AGG | + | chr3_4:75234255-75234274 | Msa0522160:intron | 55.0% | |
| !! | GAGGTACTGGGAATGGGCAA+AGG | + | chr3_4:75234655-75234674 | Msa0522160:exon | 55.0% |
| GTTTCCGACAGCCCTAACGG+TGG | + | chr3_4:75228848-75228867 | Msa0522160:CDS | 60.0% | |
| AGAGCCACCGTTAGGGCTGT+CGG | - | chr3_4:75228855-75228874 | None:intergenic | 60.0% | |
| ! | GGAGGTGTAGAGCCACCGTT+AGG | - | chr3_4:75228863-75228882 | None:intergenic | 60.0% |
| ! | TGTTCTTGTTGTGGCGGCGG+GGG | - | chr3_4:75228890-75228909 | None:intergenic | 60.0% |
| GGTTCTTCGCCGCCTTGATC+AGG | + | chr3_4:75229145-75229164 | Msa0522160:CDS | 60.0% | |
| CACATTGTCGAACGGGGTGG+GGG | + | chr3_4:75229547-75229566 | Msa0522160:intron | 60.0% | |
| ATCAGGTGTCCCGTGAGAGG+TGG | - | chr3_4:75230169-75230188 | None:intergenic | 60.0% | |
| GCAGGTTCATGGACCTGGAG+TGG | + | chr3_4:75230668-75230687 | Msa0522160:intron | 60.0% | |
| GGGTCTATTCACAGTGGCGG+TGG | + | chr3_4:75232103-75232122 | Msa0522160:CDS | 60.0% | |
| !! | GGTTCTCCCGCTGATTCAGC+AGG | - | chr3_4:75233458-75233477 | None:intergenic | 60.0% |
| CAGCGGGAGAACCTTCCCTT+CGG | + | chr3_4:75233465-75233484 | Msa0522160:intron | 60.0% | |
| !! | CTGGGGCTGTTGCTTTGCTG+AGG | + | chr3_4:75234636-75234655 | Msa0522160:CDS | 60.0% |
| ATTGTCGAACGGGGTGGGGG+TGG | + | chr3_4:75229550-75229569 | Msa0522160:intron | 65.0% | |
| TTGTCGAACGGGGTGGGGGT+GGG | + | chr3_4:75229551-75229570 | Msa0522160:intron | 65.0% | |
| AAGCAGCTGACCCGCCAACG+AGG | + | chr3_4:75229797-75229816 | Msa0522160:CDS | 65.0% | |
| TGTTGTGGCGGCGGGGGAAG+CGG | - | chr3_4:75228884-75228903 | None:intergenic | 70.0% | |
| ! | TGTGGCGGCGGGGGAAGCGG+AGG | - | chr3_4:75228881-75228900 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 75228648 | 75235121 | 75228648 | ID=Msa0522160;Name=Msa0522160 |
| chr3_4 | mRNA | 75228648 | 75235121 | 75228648 | ID=Msa0522160-mRNA-1;Parent=Msa0522160;Name=Msa0522160-mRNA-1;_AED=0.16;_eAED=0.16;_QI=194|0.76|0.85|1|0.84|0.92|14|465|768 |
| chr3_4 | exon | 75228648 | 75228994 | 75228648 | ID=Msa0522160-mRNA-1:exon:21444;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75229089 | 75229166 | 75229089 | ID=Msa0522160-mRNA-1:exon:21445;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75229779 | 75229886 | 75229779 | ID=Msa0522160-mRNA-1:exon:21446;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75230672 | 75230734 | 75230672 | ID=Msa0522160-mRNA-1:exon:21447;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75230821 | 75230982 | 75230821 | ID=Msa0522160-mRNA-1:exon:21448;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75231631 | 75231744 | 75231631 | ID=Msa0522160-mRNA-1:exon:21449;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75231841 | 75231903 | 75231841 | ID=Msa0522160-mRNA-1:exon:21450;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75232000 | 75232329 | 75232000 | ID=Msa0522160-mRNA-1:exon:21451;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75232415 | 75232579 | 75232415 | ID=Msa0522160-mRNA-1:exon:21452;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75232733 | 75233446 | 75232733 | ID=Msa0522160-mRNA-1:exon:21453;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75233541 | 75233741 | 75233541 | ID=Msa0522160-mRNA-1:exon:21454;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75233775 | 75233849 | 75233775 | ID=Msa0522160-mRNA-1:exon:21455;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75234451 | 75234456 | 75234451 | ID=Msa0522160-mRNA-1:exon:21456;Parent=Msa0522160-mRNA-1 |
| chr3_4 | exon | 75234582 | 75235121 | 75234582 | ID=Msa0522160-mRNA-1:exon:21457;Parent=Msa0522160-mRNA-1 |
| chr3_4 | five_prime_UTR | 75228648 | 75228841 | 75228648 | ID=Msa0522160-mRNA-1:five_prime_utr;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75228842 | 75228994 | 75228842 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75229089 | 75229166 | 75229089 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75229779 | 75229886 | 75229779 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75230672 | 75230734 | 75230672 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75230821 | 75230982 | 75230821 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75231631 | 75231744 | 75231631 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75231841 | 75231903 | 75231841 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75232000 | 75232329 | 75232000 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75232415 | 75232579 | 75232415 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75232733 | 75233446 | 75232733 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75233541 | 75233741 | 75233541 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75233775 | 75233849 | 75233775 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75234451 | 75234456 | 75234451 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | CDS | 75234582 | 75234656 | 75234582 | ID=Msa0522160-mRNA-1:cds;Parent=Msa0522160-mRNA-1 |
| chr3_4 | three_prime_UTR | 75234657 | 75235121 | 75234657 | ID=Msa0522160-mRNA-1:three_prime_utr;Parent=Msa0522160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
