Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478090 | KEH36091.1 | 97.994 | 698 | 11 | 1 | 1 | 698 | 1 | 695 | 0.0 | 1431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478090 | sp|Q8VYW1|PAPS4_ARATH | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478090 | A0A072V338 | 97.994 | 698 | 11 | 1 | 1 | 698 | 1 | 695 | 0.0 | 1431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0186230 | Msa0478090 | 0.889925 | 1.565037e-73 | -8.615850e-47 |
| Msa0383910 | Msa0478090 | 0.995127 | 2.860498e-213 | -8.615850e-47 |
| Msa0434390 | Msa0478090 | 0.876726 | 1.110623e-68 | -8.615850e-47 |
| Msa0478090 | Msa0522160 | 0.923846 | 1.548814e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478090 | MtrunA17_Chr3g0140561 | 94.868 | 721 | 13 | 2 | 1 | 700 | 1 | 718 | 0.0 | 1416 |
| Msa0478090 | MtrunA17_Chr8g0340751 | 66.901 | 568 | 157 | 5 | 3 | 549 | 9 | 566 | 0.0 | 778 |
| Msa0478090 | MtrunA17_Chr6g0483461 | 60.229 | 523 | 179 | 5 | 18 | 516 | 4 | 521 | 0.0 | 670 |
| Msa0478090 | MtrunA17_Chr8g0392531 | 60.314 | 509 | 176 | 4 | 29 | 516 | 19 | 522 | 0.0 | 660 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478090 | AT4G32850.9 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 859 |
| Msa0478090 | AT4G32850.5 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 859 |
| Msa0478090 | AT4G32850.8 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
| Msa0478090 | AT4G32850.10 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
| Msa0478090 | AT4G32850.6 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
| Msa0478090 | AT4G32850.2 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
| Msa0478090 | AT4G32850.3 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
| Msa0478090 | AT4G32850.1 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 858 |
| Msa0478090 | AT4G32850.13 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT4G32850.15 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT4G32850.16 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT4G32850.4 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT4G32850.7 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT4G32850.17 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT4G32850.14 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT4G32850.12 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT4G32850.11 | 67.141 | 633 | 170 | 5 | 1 | 606 | 1 | 622 | 0.0 | 857 |
| Msa0478090 | AT2G25850.4 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 842 |
| Msa0478090 | AT2G25850.1 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 841 |
| Msa0478090 | AT2G25850.3 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 841 |
| Msa0478090 | AT2G25850.2 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 840 |
| Msa0478090 | AT2G25850.6 | 70.087 | 575 | 147 | 3 | 30 | 583 | 26 | 596 | 0.0 | 839 |
| Msa0478090 | AT2G25850.7 | 70.087 | 575 | 147 | 3 | 30 | 583 | 26 | 596 | 0.0 | 839 |
| Msa0478090 | AT2G25850.8 | 70.087 | 575 | 147 | 3 | 30 | 583 | 26 | 596 | 0.0 | 839 |
| Msa0478090 | AT2G25850.5 | 70.087 | 575 | 147 | 3 | 30 | 583 | 26 | 596 | 0.0 | 839 |
| Msa0478090 | AT2G25850.9 | 69.965 | 576 | 148 | 3 | 29 | 583 | 25 | 596 | 0.0 | 838 |
| Msa0478090 | AT1G17980.1 | 61.237 | 485 | 163 | 4 | 23 | 484 | 5 | 487 | 0.0 | 632 |
| Msa0478090 | AT1G17980.2 | 61.602 | 362 | 116 | 3 | 144 | 484 | 1 | 360 | 9.11e-163 | 482 |
| Msa0478090 | AT3G06560.1 | 33.186 | 452 | 253 | 9 | 49 | 475 | 21 | 448 | 3.56e-68 | 233 |
Find 217 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTAACATCCATCATTTC+AGG | 0.158083 | 3_3:+82562069 | None:intergenic |
| CAAACTGTTCGAAGTCTTAA+TGG | 0.168443 | 3_3:-82563521 | Msa0478090:CDS |
| AAACCATGCGGCTGAGAAAA+TGG | 0.183581 | 3_3:-82562160 | Msa0478090:CDS |
| GTATGCAAGCATATCTATTT+TGG | 0.195681 | 3_3:-82564246 | Msa0478090:CDS |
| TTTCGATGTGTTTAGGTTAC+TGG | 0.209043 | 3_3:-82563212 | Msa0478090:intron |
| TGTTGGTTTCTAGATTCTTT+AGG | 0.216571 | 3_3:-82563115 | Msa0478090:CDS |
| GATTCCTTGGAGGAGTAAAT+TGG | 0.220082 | 3_3:-82563190 | Msa0478090:CDS |
| TGAAAGTTGTACTAGTAAAT+TGG | 0.221124 | 3_3:-82561989 | Msa0478090:CDS |
| GTTGGTTTCTAGATTCTTTA+GGG | 0.224014 | 3_3:-82563114 | Msa0478090:CDS |
| GGCTAATCAGATTAAGGTTT+TGG | 0.224463 | 3_3:-82560479 | Msa0478090:three_prime_UTR |
| GTCCGCTTCTCTGGTTTATC+TGG | 0.228167 | 3_3:+82562048 | None:intergenic |
| ACAGCACCCTCTTCCCAATT+TGG | 0.235857 | 3_3:+82561573 | None:intergenic |
| GCTTTGTAGGAGGATAATTT+TGG | 0.238055 | 3_3:-82560622 | Msa0478090:intron |
| TCTATAGGGCATAGCATTAC+AGG | 0.238894 | 3_3:+82563065 | None:intergenic |
| CTGTTGCTTTGCTGAGGTAC+TGG | 0.247333 | 3_3:-82560553 | Msa0478090:exon |
| AGGGTTCTTCTTCCTCTTGA+TGG | 0.251063 | 3_3:+82562089 | None:intergenic |
| TCACCTCGCAATTGAGGTTC+TGG | 0.263013 | 3_3:+82561472 | None:intergenic |
| ACGAACTGCATTTACCTATA+TGG | 0.264976 | 3_3:-82563037 | Msa0478090:CDS |
| CTTGTTCTTGTTGTGGCGGC+GGG | 0.275169 | 3_3:+82566306 | None:intergenic |
| AATGGAGGCTAATCAGATTA+AGG | 0.289876 | 3_3:-82560485 | Msa0478090:three_prime_UTR |
| TGGAATTTGAATTTCATTAC+TGG | 0.299937 | 3_3:+82564290 | None:intergenic |
| GAAACATAAATTTCCATTCC+CGG | 0.321696 | 3_3:+82562258 | None:intergenic |
| GGAAGCTGATTGTTCAAGTT+TGG | 0.324383 | 3_3:+82566383 | None:intergenic |
| AATTTACTAGTACAACTTTC+AGG | 0.325729 | 3_3:+82561991 | None:intergenic |
| AACATACTAGGGATTGCATT+AGG | 0.327078 | 3_3:+82563134 | None:intergenic |
| GAGAAAGTCAAGGGAGCGTT+TGG | 0.328886 | 3_3:+82566452 | None:intergenic |
| TAAGCATAATTGCAGGTTCA+TGG | 0.335996 | 3_3:-82564538 | Msa0478090:intron |
| CATATATTAACCTCGACATT+TGG | 0.344144 | 3_3:+82563464 | None:intergenic |
| CTAACAGATGTCCGCTTCTC+TGG | 0.358311 | 3_3:+82562039 | None:intergenic |
| TGCAGTTCGTTCTCTTCTAT+AGG | 0.367427 | 3_3:+82563050 | None:intergenic |
| GCAGTTCGTTCTCTTCTATA+GGG | 0.376096 | 3_3:+82563051 | None:intergenic |
| ATTGAATTTGGAAGTTTAGA+TGG | 0.377967 | 3_3:-82560163 | Msa0478090:three_prime_UTR |
| CAATCAGCTTCCAACGATAA+TGG | 0.378069 | 3_3:-82566372 | Msa0478090:exon |
| TTGTTGACTCCACTCATGAT+AGG | 0.379040 | 3_3:-82561804 | Msa0478090:CDS |
| AACAACAAAGTTCCCACCTC+TGG | 0.389216 | 3_3:+82560309 | None:intergenic |
| GGGTATGCAGGAGTAATTAT+TGG | 0.389243 | 3_3:+82562975 | None:intergenic |
| TCTCAATCGTAACACTGAAT+TGG | 0.391289 | 3_3:-82566228 | Msa0478090:CDS |
| GGGCATAGCATTACAGGGTT+TGG | 0.397753 | 3_3:+82563071 | None:intergenic |
| GCAATTGAGGTTCTGGGTGC+TGG | 0.397766 | 3_3:+82561479 | None:intergenic |
| GTTTAGGTTACTGGATTCCT+TGG | 0.400709 | 3_3:-82563203 | Msa0478090:intron |
| CAATAATGTGAATCTCAAAC+TGG | 0.401939 | 3_3:+82566486 | None:intergenic |
| TGCAGAATGCGCACAAGGCT+TGG | 0.402768 | 3_3:+82562398 | None:intergenic |
| GTGGGGCCAGCAATTGAGAT+AGG | 0.409562 | 3_3:+82566260 | None:intergenic |
| CTTTGCTGAGGTACTGGGAA+TGG | 0.409726 | 3_3:-82560547 | Msa0478090:exon |
| AATCTAGAAACCAACATACT+AGG | 0.410770 | 3_3:+82563122 | None:intergenic |
| AAATTATTATGTATGTATAC+TGG | 0.413244 | 3_3:-82562284 | Msa0478090:CDS |
| GCACAACATCCTTGCTGAAA+TGG | 0.417902 | 3_3:-82564354 | Msa0478090:CDS |
| CGAACTGCATTTACCTATAT+GGG | 0.423486 | 3_3:-82563036 | Msa0478090:CDS |
| GGTTCTTCGCCGCCTTGATC+AGG | 0.423547 | 3_3:-82566050 | Msa0478090:intron |
| AAGGAAGAGACAGGTGTGAT+TGG | 0.425105 | 3_3:-82566532 | Msa0478090:five_prime_UTR |
| AAGAGACAGGTGTGATTGGT+TGG | 0.429468 | 3_3:-82566528 | Msa0478090:five_prime_UTR |
| CATACAAAACTGTACCTTCA+AGG | 0.432406 | 3_3:+82562623 | None:intergenic |
| GAAAGTTGTACTAGTAAATT+GGG | 0.437207 | 3_3:-82561988 | Msa0478090:CDS |
| TCAAGGTTAGCTGTCTTAGC+CGG | 0.437995 | 3_3:+82562640 | None:intergenic |
| CGAGTGCGTTTGTAACCATC+TGG | 0.438734 | 3_3:+82562198 | None:intergenic |
| ACAAAACCTATCTCAATTGC+TGG | 0.439210 | 3_3:-82566266 | Msa0478090:CDS |
| GCTTGTTCTTGTTGTGGCGG+CGG | 0.441177 | 3_3:+82566305 | None:intergenic |
| TGTTCTTGTTGTGGCGGCGG+GGG | 0.441606 | 3_3:+82566308 | None:intergenic |
| ATCTGTGTAGCCTCGTTGGC+GGG | 0.446189 | 3_3:+82565388 | None:intergenic |
| AGGTTCTGGGTGCTGGCAAT+TGG | 0.448782 | 3_3:+82561486 | None:intergenic |
| ATTGAAGGGGTTAGGCTAGA+TGG | 0.450370 | 3_3:-82561937 | Msa0478090:CDS |
| TAGGTTACTGGATTCCTTGG+AGG | 0.452048 | 3_3:-82563200 | Msa0478090:CDS |
| ACATACTAGGGATTGCATTA+GGG | 0.455503 | 3_3:+82563135 | None:intergenic |
| GGAGGTGTAGAGCCACCGTT+AGG | 0.459771 | 3_3:+82566335 | None:intergenic |
| TGTTGCTTTGCTGAGGTACT+GGG | 0.460057 | 3_3:-82560552 | Msa0478090:exon |
| GAAGAAGAACCCTGAAATGA+TGG | 0.460726 | 3_3:-82562079 | Msa0478090:CDS |
| CACCTCGCAATTGAGGTTCT+GGG | 0.462098 | 3_3:+82561473 | None:intergenic |
| CAAGGTTAGCTGTCTTAGCC+GGG | 0.470013 | 3_3:+82562641 | None:intergenic |
| CATGGGCTTGCAAAGAAAAG+AGG | 0.470510 | 3_3:-82562370 | Msa0478090:CDS |
| TGCAAAATCTTATGCTACAC+TGG | 0.471864 | 3_3:-82560578 | Msa0478090:CDS |
| GCTTAACATCCATCATTTCA+GGG | 0.473503 | 3_3:+82562070 | None:intergenic |
| ATTACTGGGACATGTGCATC+AGG | 0.474856 | 3_3:+82564305 | None:intergenic |
| AAGTCATCTGATGGACTCTC+AGG | 0.475860 | 3_3:-82561877 | Msa0478090:CDS |
| GCAAATCTATAGATATTCCT+TGG | 0.478520 | 3_3:+82564270 | None:intergenic |
| GATGGACCTTTCAGAAGAGC+TGG | 0.480410 | 3_3:+82562107 | None:intergenic |
| CGGAACCGTCTGAGATATCC+AGG | 0.480431 | 3_3:+82563564 | None:intergenic |
| TAATGTGATACCTGTCCCTA+TGG | 0.485105 | 3_3:+82563000 | None:intergenic |
| TTTGCTGAGGTACTGGGAAT+GGG | 0.485818 | 3_3:-82560546 | Msa0478090:exon |
| TGATTGTTCAAGTTTGGAGA+TGG | 0.485929 | 3_3:+82566389 | None:intergenic |
| GGGTCTATTCACAGTGGCGG+TGG | 0.488614 | 3_3:-82563094 | Msa0478090:CDS |
| AACCATGCGGCTGAGAAAAT+GGG | 0.488999 | 3_3:-82562159 | Msa0478090:CDS |
| ATGAGTATCGAGTGTATTGA+AGG | 0.491692 | 3_3:-82561952 | Msa0478090:CDS |
| GAATTCATGCAAGGGTATGC+AGG | 0.493227 | 3_3:+82562963 | None:intergenic |
| CAATGCAGATCGTGAAAAGC+TGG | 0.495300 | 3_3:-82565424 | Msa0478090:intron |
| TTTGGGGAATTGGGGTTTGG+AGG | 0.495456 | 3_3:+82566430 | None:intergenic |
| AGAAACTCACCTCGCAATTG+AGG | 0.496667 | 3_3:+82561466 | None:intergenic |
| AAGCACTCTTCGTGTTATGA+TGG | 0.498529 | 3_3:-82562922 | Msa0478090:CDS |
| TTTCACAAGGGCAGAATGTA+CGG | 0.499588 | 3_3:-82561517 | Msa0478090:CDS |
| GTTACGATTGAGATCAGCTT+CGG | 0.503977 | 3_3:+82566238 | None:intergenic |
| ATTCCTTGGAGGAGTAAATT+GGG | 0.506443 | 3_3:-82563189 | Msa0478090:CDS |
| GTTTGCTTGCGATGTGGATG+TGG | 0.508377 | 3_3:-82560289 | Msa0478090:three_prime_UTR |
| GATACGACAAAGTGCAACTC+TGG | 0.509921 | 3_3:-82562132 | Msa0478090:CDS |
| ATACACTCGATACTCATTTG+AGG | 0.510734 | 3_3:+82561958 | None:intergenic |
| CAAAGAAAAGAGGGAGTAAG+AGG | 0.511284 | 3_3:-82562360 | Msa0478090:CDS |
| ATCTAGAAACCAACATACTA+GGG | 0.511391 | 3_3:+82563123 | None:intergenic |
| AGAAATAAGTGACCTGATCA+AGG | 0.513935 | 3_3:+82566038 | None:intergenic |
| CTCATGATAGGCTGAAATCA+AGG | 0.514106 | 3_3:-82561792 | Msa0478090:CDS |
| GCTAAGACAGCTAACCTTGA+AGG | 0.516604 | 3_3:-82562637 | Msa0478090:intron |
| TTTCTGCGAGGATCCCATAT+AGG | 0.521287 | 3_3:+82563023 | None:intergenic |
| TCGAGTGTATTGAAGGGGTT+AGG | 0.521648 | 3_3:-82561945 | Msa0478090:CDS |
| TGTATACTGGAAGCCGGGAA+TGG | 0.522453 | 3_3:-82562271 | Msa0478090:CDS |
| TTGTTGGCTTGTTCTTGTTG+TGG | 0.523802 | 3_3:+82566299 | None:intergenic |
| TATGTATGTATACTGGAAGC+CGG | 0.523871 | 3_3:-82562277 | Msa0478090:CDS |
| CTATAGGGCATAGCATTACA+GGG | 0.524690 | 3_3:+82563066 | None:intergenic |
| GGGACATGTGCATCAGGTAC+TGG | 0.525311 | 3_3:+82564311 | None:intergenic |
| GGAATTTGAATTTCATTACT+GGG | 0.525618 | 3_3:+82564291 | None:intergenic |
| GGATTGCATTAGGGTAAAGC+TGG | 0.527585 | 3_3:+82563144 | None:intergenic |
| TAATTGCAGGTTCATGGACC+TGG | 0.530132 | 3_3:-82564532 | Msa0478090:intron |
| TGTGAAATCAAGTCATCTGA+TGG | 0.530158 | 3_3:-82561886 | Msa0478090:CDS |
| GCTTGTCGAGACATTGTAGC+TGG | 0.530844 | 3_3:+82562941 | None:intergenic |
| ATTACATTTACATAGCATGA+TGG | 0.533614 | 3_3:+82560249 | None:intergenic |
| AGAAAGTCAAGGGAGCGTTT+GGG | 0.534390 | 3_3:+82566453 | None:intergenic |
| GATTGTTCAAGTTTGGAGAT+GGG | 0.536486 | 3_3:+82566390 | None:intergenic |
| CTCGCAGAAACCATAGGGAC+AGG | 0.538211 | 3_3:-82563010 | Msa0478090:CDS |
| CGATTGAGATCAGCTTCGGT+GGG | 0.538821 | 3_3:+82566242 | None:intergenic |
| GATCTGTGTAGCCTCGTTGG+CGG | 0.541806 | 3_3:+82565387 | None:intergenic |
| TAATGCAATCCCTAGTATGT+TGG | 0.542179 | 3_3:-82563132 | Msa0478090:CDS |
| TCTGCATACTCATGTGGATA+AGG | 0.542761 | 3_3:+82562426 | None:intergenic |
| GGGTTTGGAGGAGAAAGTCA+AGG | 0.545782 | 3_3:+82566442 | None:intergenic |
| GGATCCTCGCAGAAACCATA+GGG | 0.546951 | 3_3:-82563015 | Msa0478090:CDS |
| ACGATTGAGATCAGCTTCGG+TGG | 0.547207 | 3_3:+82566241 | None:intergenic |
| GAGTCAATGAGGACAAAGCT+CGG | 0.548398 | 3_3:-82561650 | Msa0478090:CDS |
| GGGATCCTCGCAGAAACCAT+AGG | 0.548811 | 3_3:-82563016 | Msa0478090:CDS |
| AAGCTTGCCAAATTGGGAAG+AGG | 0.549390 | 3_3:-82561580 | Msa0478090:CDS |
| GCAAAATCTTATGCTACACT+GGG | 0.550317 | 3_3:-82560577 | Msa0478090:CDS |
| ACCTCTCGATTTACATAGGA+AGG | 0.552492 | 3_3:+82564481 | None:intergenic |
| CTTGATTTCACAATTGCTGT+CGG | 0.552840 | 3_3:+82561897 | None:intergenic |
| GACTTTAGAAGTTCAGAATG+AGG | 0.554195 | 3_3:-82561770 | Msa0478090:intron |
| ATGTATGTATACTGGAAGCC+GGG | 0.558185 | 3_3:-82562276 | Msa0478090:CDS |
| ACAACAAAGTTCCCACCTCT+GGG | 0.562793 | 3_3:+82560310 | None:intergenic |
| GAGGTACTGGGAATGGGCAA+AGG | 0.564355 | 3_3:-82560540 | Msa0478090:three_prime_UTR |
| AGAAGCTGCAAGTAGAGAAG+AGG | 0.565106 | 3_3:-82566071 | Msa0478090:CDS |
| TCTGATCTGTGTAGCCTCGT+TGG | 0.565299 | 3_3:+82565384 | None:intergenic |
| TCGGAAACCACCATTATCGT+TGG | 0.566154 | 3_3:+82566362 | None:intergenic |
| TCAATCTGCAGCGATTTCGT+TGG | 0.567422 | 3_3:-82560131 | Msa0478090:three_prime_UTR |
| AGCTTGCCAAATTGGGAAGA+GGG | 0.568586 | 3_3:-82561579 | Msa0478090:CDS |
| AGAGGGAGTAAGAGGTCAAG+AGG | 0.568590 | 3_3:-82562352 | Msa0478090:CDS |
| CTGGATCCAGCTCTTCTGAA+AGG | 0.568898 | 3_3:-82562113 | Msa0478090:CDS |
| GTAATGAAATTCAAATTCCA+AGG | 0.569489 | 3_3:-82564287 | Msa0478090:CDS |
| ATGATGGATGTATCAATCAC+AGG | 0.570189 | 3_3:+82560265 | None:intergenic |
| CATATTTGCGTACCCAGAGG+TGG | 0.572136 | 3_3:-82560322 | Msa0478090:three_prime_UTR |
| TGATTTCAGCCTATCATGAG+TGG | 0.572409 | 3_3:+82561795 | None:intergenic |
| TCTGATGGACTCTCAGGAAG+TGG | 0.572545 | 3_3:-82561871 | Msa0478090:CDS |
| TTGTTCTTGTTGTGGCGGCG+GGG | 0.573047 | 3_3:+82566307 | None:intergenic |
| CAGATAGAGCGAGATACAAG+TGG | 0.576975 | 3_3:-82562465 | Msa0478090:CDS |
| GGAGAGGTTGGGTAGAATCC+CGG | 0.578285 | 3_3:-82562659 | Msa0478090:CDS |
| ATGGGCTTGCAAAGAAAAGA+GGG | 0.578749 | 3_3:-82562369 | Msa0478090:CDS |
| TAAGAATTTGATCCGCCACT+CGG | 0.580007 | 3_3:+82563495 | None:intergenic |
| CAGGTGTGATTGGTTGGAGT+GGG | 0.580960 | 3_3:-82566522 | Msa0478090:five_prime_UTR |
| AAAGTGTCTATGTCCACTCC+AGG | 0.581764 | 3_3:+82564514 | None:intergenic |
| TAAACTTGTTCCAAATGTCG+AGG | 0.582707 | 3_3:-82563474 | Msa0478090:intron |
| TATCACCTCTCGATTTACAT+AGG | 0.583433 | 3_3:+82564477 | None:intergenic |
| ACAGGTGTGATTGGTTGGAG+TGG | 0.585338 | 3_3:-82566523 | Msa0478090:five_prime_UTR |
| CTACACAGATCAGATGGTTG+AGG | 0.585660 | 3_3:-82565375 | Msa0478090:CDS |
| GCCCTATTGTATATAAAACA+TGG | 0.585972 | 3_3:-82560387 | Msa0478090:three_prime_UTR |
| AGAGCCACCGTTAGGGCTGT+CGG | 0.588141 | 3_3:+82566343 | None:intergenic |
| GTGGTTTCCGACAGCCCTAA+CGG | 0.588449 | 3_3:-82566350 | Msa0478090:CDS |
| AGTCAATGAGGACAAAGCTC+GGG | 0.588552 | 3_3:-82561649 | Msa0478090:CDS |
| TCTTAATGGTTGCCGAGTGG+CGG | 0.589415 | 3_3:-82563507 | Msa0478090:CDS |
| GACATAGACACTTTGTGCAT+CGG | 0.589418 | 3_3:-82564505 | Msa0478090:CDS |
| GAGGTGTAGAGCCACCGTTA+GGG | 0.594118 | 3_3:+82566336 | None:intergenic |
| TAGCCCAATTTACTCCTCCA+AGG | 0.594120 | 3_3:+82563186 | None:intergenic |
| TGAGTATCGAGTGTATTGAA+GGG | 0.596741 | 3_3:-82561951 | Msa0478090:CDS |
| CTGGGGCTGTTGCTTTGCTG+AGG | 0.597619 | 3_3:-82560559 | Msa0478090:exon |
| CCCTATTGTATATAAAACAT+GGG | 0.599734 | 3_3:-82560386 | Msa0478090:three_prime_UTR |
| AAACACACTCTAGCCTCTGT+GGG | 0.600970 | 3_3:+82562016 | None:intergenic |
| TACATTGATGAACAGCATGA+TGG | 0.601254 | 3_3:-82560432 | Msa0478090:three_prime_UTR |
| ACAAAGCTTGTAATTTCACA+AGG | 0.601723 | 3_3:-82561530 | Msa0478090:CDS |
| TTTGTTGTTTGCTTGCGATG+TGG | 0.601983 | 3_3:-82560295 | Msa0478090:three_prime_UTR |
| TCGTAACACTGAATTGGAGA+AGG | 0.606004 | 3_3:-82566222 | Msa0478090:intron |
| GAAACACACTCTAGCCTCTG+TGG | 0.608395 | 3_3:+82562015 | None:intergenic |
| TTGTAGCTGGAATTCATGCA+AGG | 0.612790 | 3_3:+82562954 | None:intergenic |
| TTCATCAACATCATACAGAA+CGG | 0.616959 | 3_3:+82563544 | None:intergenic |
| GCAGGTTCATGGACCTGGAG+TGG | 0.617886 | 3_3:-82564527 | Msa0478090:intron |
| TAACTTCTTCCATTTCAGCA+AGG | 0.618799 | 3_3:+82564345 | None:intergenic |
| GGTTTGGAGGAGAAAGTCAA+GGG | 0.619492 | 3_3:+82566443 | None:intergenic |
| TTAGGGTCTATTCACAGTGG+CGG | 0.623887 | 3_3:-82563097 | Msa0478090:CDS |
| AGCCAGATAAACCAGAGAAG+CGG | 0.626338 | 3_3:-82562050 | Msa0478090:CDS |
| ATGATGGAACAGTTCTGCTA+TGG | 0.632180 | 3_3:-82562906 | Msa0478090:CDS |
| CTTCTGAAAGGTCCATCAAG+AGG | 0.632992 | 3_3:-82562101 | Msa0478090:CDS |
| ACGAGGCTACACAGATCAGA+TGG | 0.633586 | 3_3:-82565381 | Msa0478090:CDS |
| GAGTATCGAGTGTATTGAAG+GGG | 0.634925 | 3_3:-82561950 | Msa0478090:CDS |
| ACAAACGCACTCGAATGCCT+AGG | 0.636758 | 3_3:-82562188 | Msa0478090:CDS |
| AGATAGAGCGAGATACAAGT+GGG | 0.636989 | 3_3:-82562464 | Msa0478090:CDS |
| GACGTGTCTGCATACTCATG+TGG | 0.637311 | 3_3:+82562420 | None:intergenic |
| GAGGGAGTAAGAGGTCAAGA+GGG | 0.638723 | 3_3:-82562351 | Msa0478090:CDS |
| TTGGCTTGTTCTTGTTGTGG+CGG | 0.638810 | 3_3:+82566302 | None:intergenic |
| TGAAGAGCTGATACAAACAA+TGG | 0.640811 | 3_3:-82560503 | Msa0478090:three_prime_UTR |
| GATTGAGATCAGCTTCGGTG+GGG | 0.644690 | 3_3:+82566243 | None:intergenic |
| CAAAGCTTGTAATTTCACAA+GGG | 0.646659 | 3_3:-82561529 | Msa0478090:CDS |
| GCCGCATGGTTTATATGCCT+AGG | 0.651199 | 3_3:+82562171 | None:intergenic |
| CACCCAGAACCTCAATTGCG+AGG | 0.656438 | 3_3:-82561475 | Msa0478090:intron |
| GATGGAGATGCTTTAAAATG+CGG | 0.658430 | 3_3:-82560414 | Msa0478090:three_prime_UTR |
| TGTAGCTGGAATTCATGCAA+GGG | 0.661048 | 3_3:+82562955 | None:intergenic |
| AGAGCCAAAAGTGAAAATGA+CGG | 0.665482 | 3_3:+82565343 | None:intergenic |
| ATATTTGCGTACCCAGAGGT+GGG | 0.665579 | 3_3:-82560321 | Msa0478090:three_prime_UTR |
| AATGCAGATCGTGAAAAGCT+GGG | 0.665878 | 3_3:-82565423 | Msa0478090:intron |
| TCAGCTTCCAACGATAATGG+TGG | 0.666264 | 3_3:-82566369 | Msa0478090:exon |
| AAGTCTTAATGGTTGCCGAG+TGG | 0.667186 | 3_3:-82563510 | Msa0478090:CDS |
| CAGGACCTGGATATCTCAGA+CGG | 0.670665 | 3_3:-82563569 | Msa0478090:CDS |
| ATTTCAGAATGGAGTCAATG+AGG | 0.672391 | 3_3:-82561661 | Msa0478090:intron |
| TCCTTCCTATGTAAATCGAG+AGG | 0.672788 | 3_3:-82564482 | Msa0478090:intron |
| GGACAGCAGTTTGATATACG+TGG | 0.673860 | 3_3:-82562330 | Msa0478090:CDS |
| GTAACAGACTCACCCCTAGT+CGG | 0.683713 | 3_3:+82565318 | None:intergenic |
| AGTTGTACTAGTAAATTGGG+TGG | 0.697247 | 3_3:-82561985 | Msa0478090:CDS |
| GCCTAGGCATATAAACCATG+CGG | 0.702233 | 3_3:-82562172 | Msa0478090:CDS |
| AGAGCTGATACAAACAATGG+AGG | 0.705771 | 3_3:-82560500 | Msa0478090:three_prime_UTR |
| AGTGGTACAATTACTGACGT+AGG | 0.706187 | 3_3:-82561853 | Msa0478090:CDS |
| AAGCAGCTGACCCGCCAACG+AGG | 0.710522 | 3_3:-82565398 | Msa0478090:CDS |
| GTTTCCGACAGCCCTAACGG+TGG | 0.710822 | 3_3:-82566347 | Msa0478090:CDS |
| TCTTTAGGGTCTATTCACAG+TGG | 0.718102 | 3_3:-82563100 | Msa0478090:CDS |
| TAACATATTTGCGTACCCAG+AGG | 0.718156 | 3_3:-82560325 | Msa0478090:three_prime_UTR |
| CTGTCCCTATGGTTTCTGCG+AGG | 0.721142 | 3_3:+82563011 | None:intergenic |
| TTGAGCTTAACAAATCACAG+TGG | 0.747863 | 3_3:-82562776 | Msa0478090:CDS |
| GGACATCTGTTAGCCCACAG+AGG | 0.750930 | 3_3:-82562029 | Msa0478090:CDS |
| AATAAGTGACCTGATCAAGG+CGG | 0.753360 | 3_3:+82566041 | None:intergenic |
| CAAAATCTTATGCTACACTG+GGG | 0.787010 | 3_3:-82560576 | Msa0478090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATATGTTTTCATTAATT+TGG | - | chr3_3:82563190-82563209 | Msa0478090:CDS | 10.0% |
| !! | AAATTTAAAAATGAAACAAA+AGG | + | chr3_3:82565815-82565834 | None:intergenic | 10.0% |
| !! | ATTAATTATTAAATAGATGC+TGG | + | chr3_3:82560866-82560885 | None:intergenic | 15.0% |
| !!! | ATTAAAATTTTGTAGTGATA+AGG | - | chr3_3:82561184-82561203 | Msa0478090:intron | 15.0% |
| !! | TATACTTAAACGTTTATATA+TGG | - | chr3_3:82561575-82561594 | Msa0478090:CDS | 15.0% |
| !!! | TTAACAAATTCTTTTGTTTT+TGG | - | chr3_3:82564115-82564134 | Msa0478090:intron | 15.0% |
| !! | AAATTATTATGTATGTATAC+TGG | - | chr3_3:82564355-82564374 | Msa0478090:CDS | 15.0% |
| !! | CATATTATTAAATCAGAAAA+TGG | - | chr3_3:82565548-82565567 | Msa0478090:intron | 15.0% |
| !! | AGAATATAATAATTCAAGAG+TGG | + | chr3_3:82560899-82560918 | None:intergenic | 20.0% |
| !! | CGAATAAAGAAGAAAAAAAA+AGG | + | chr3_3:82561128-82561147 | None:intergenic | 20.0% |
| !! | CAATTTCTACAATAAATCAA+AGG | + | chr3_3:82561458-82561477 | None:intergenic | 20.0% |
| !! | AAATTGGAAGTAATATTCAT+TGG | + | chr3_3:82561816-82561835 | None:intergenic | 20.0% |
| !!! | GAGACATTTTATGATAAAAT+TGG | + | chr3_3:82561832-82561851 | None:intergenic | 20.0% |
| !!! | AAATGGTATTTTCATAAAAC+AGG | + | chr3_3:82562027-82562046 | None:intergenic | 20.0% |
| !! | AATAATTTAAGCATAATTGC+AGG | - | chr3_3:82562094-82562113 | Msa0478090:CDS | 20.0% |
| !! | AAATATAGCAGAACATATAA+AGG | + | chr3_3:82562463-82562482 | None:intergenic | 20.0% |
| !! | TTATTAAAACATTTGTCTCT+TGG | - | chr3_3:82562482-82562501 | Msa0478090:intron | 20.0% |
| !! | TATTAAAACATTTGTCTCTT+GGG | - | chr3_3:82562483-82562502 | Msa0478090:intron | 20.0% |
| !!! | TTATATTTCTTTCCTGTTTT+TGG | - | chr3_3:82562624-82562643 | Msa0478090:intron | 20.0% |
| !! | TTAAGTTTGATGCATTATAT+TGG | - | chr3_3:82562866-82562885 | Msa0478090:intron | 20.0% |
| !!! | ATTGAGATGTTTAAAGTTTT+GGG | - | chr3_3:82563297-82563316 | Msa0478090:intron | 20.0% |
| !!! | GAAAAGCATGTATTAATATA+CGG | + | chr3_3:82564141-82564160 | None:intergenic | 20.0% |
| !! | TTAAAAATGAAACAAAAGGA+AGG | + | chr3_3:82565811-82565830 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTGATTACTTTGT+CGG | - | chr3_3:82565831-82565850 | Msa0478090:intron | 20.0% |
| !!! | TTGTAAATACTGTTTTTCTT+TGG | - | chr3_3:82565989-82566008 | Msa0478090:intron | 20.0% |
| !!! | AATGTTGAAACAGATATTTT+TGG | - | chr3_3:82566449-82566468 | Msa0478090:five_prime_UTR | 20.0% |
| !! | TTTTGTGAATCTATCTTTGT+TGG | + | chr3_3:82560359-82560378 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTCTTTCAGTTTT+TGG | - | chr3_3:82560517-82560536 | Msa0478090:three_prime_UTR | 25.0% |
| !!! | TTATTGTCGTTTTCTTGTTT+TGG | - | chr3_3:82560713-82560732 | Msa0478090:intron | 25.0% |
| !! | AATCAGTCTCACAAATTTTT+GGG | - | chr3_3:82560808-82560827 | Msa0478090:intron | 25.0% |
| ! | GTTAATTTCTCCTGATTATT+TGG | - | chr3_3:82561405-82561424 | Msa0478090:intron | 25.0% |
| ! | GGATAAACCAAAAATATATC+AGG | + | chr3_3:82561630-82561649 | None:intergenic | 25.0% |
| !!! | GATATATTTTTGGTTTATCC+TGG | - | chr3_3:82561630-82561649 | Msa0478090:CDS | 25.0% |
| ! | TCAACATTATTTAATTCCCA+GGG | - | chr3_3:82561694-82561713 | Msa0478090:intron | 25.0% |
| !! | TTTTATGCAATTCATAGAAC+AGG | + | chr3_3:82561992-82562011 | None:intergenic | 25.0% |
| ! | CACTTACAAAACAAACAAAA+TGG | + | chr3_3:82562044-82562063 | None:intergenic | 25.0% |
| !!! | CATTTTGTTTGTTTTGTAAG+TGG | - | chr3_3:82562042-82562061 | Msa0478090:CDS | 25.0% |
| ! | GGAATTTGAATTTCATTACT+GGG | + | chr3_3:82562351-82562370 | None:intergenic | 25.0% |
| ! | TGGAATTTGAATTTCATTAC+TGG | + | chr3_3:82562352-82562371 | None:intergenic | 25.0% |
| ! | GTAATGAAATTCAAATTCCA+AGG | - | chr3_3:82562352-82562371 | Msa0478090:CDS | 25.0% |
| ! | AAGAAAACTCAACTTTACAA+AGG | + | chr3_3:82562546-82562565 | None:intergenic | 25.0% |
| !! | TTTGTAAAGTTGAGTTTTCT+TGG | - | chr3_3:82562545-82562564 | Msa0478090:intron | 25.0% |
| !! | TTGTAAAGTTGAGTTTTCTT+GGG | - | chr3_3:82562546-82562565 | Msa0478090:intron | 25.0% |
| !!! | TTTAGTTGTTTTATTGCTTG+AGG | - | chr3_3:82562742-82562761 | Msa0478090:CDS | 25.0% |
| ! | AAAAATAAGGCATAAATGGA+TGG | + | chr3_3:82562931-82562950 | None:intergenic | 25.0% |
| ! | TAGGAAAAATAAGGCATAAA+TGG | + | chr3_3:82562935-82562954 | None:intergenic | 25.0% |
| !!! | ATTTATGCCTTATTTTTCCT+AGG | - | chr3_3:82562934-82562953 | Msa0478090:CDS | 25.0% |
| !! | TTTTTCTCCTAGGAAAAATA+AGG | + | chr3_3:82562944-82562963 | None:intergenic | 25.0% |
| ! | GGGATTAAAATGAATAAATG+AGG | + | chr3_3:82562986-82563005 | None:intergenic | 25.0% |
| !! | TAAGGGAAACTAGATTTTAA+GGG | + | chr3_3:82563006-82563025 | None:intergenic | 25.0% |
| !! | TTAAGGGAAACTAGATTTTA+AGG | + | chr3_3:82563007-82563026 | None:intergenic | 25.0% |
| !!! | AAAGTGAAGTCAAGTTTTAA+GGG | + | chr3_3:82563023-82563042 | None:intergenic | 25.0% |
| !! | TAAAGTGAAGTCAAGTTTTA+AGG | + | chr3_3:82563024-82563043 | None:intergenic | 25.0% |
| !!! | CATTGAGATGTTTAAAGTTT+TGG | - | chr3_3:82563296-82563315 | Msa0478090:intron | 25.0% |
| ! | AAAGAAATTAGTAAGGTTGT+AGG | + | chr3_3:82563361-82563380 | None:intergenic | 25.0% |
| ! | GGTTACTAAAGAAATTAGTA+AGG | + | chr3_3:82563368-82563387 | None:intergenic | 25.0% |
| ! | CTAATTTCTTTAGTAACCAA+TGG | - | chr3_3:82563370-82563389 | Msa0478090:intron | 25.0% |
| ! | TGATTAATACTTCTACTGTT+AGG | - | chr3_3:82563837-82563856 | Msa0478090:intron | 25.0% |
| ! | AATTTACTAGTACAACTTTC+AGG | + | chr3_3:82564651-82564670 | None:intergenic | 25.0% |
| ! | TGAAAGTTGTACTAGTAAAT+TGG | - | chr3_3:82564650-82564669 | Msa0478090:intron | 25.0% |
| ! | GAAAGTTGTACTAGTAAATT+GGG | - | chr3_3:82564651-82564670 | Msa0478090:intron | 25.0% |
| ! | GAAATTCCTTAATTAGAAGT+TGG | - | chr3_3:82564950-82564969 | Msa0478090:intron | 25.0% |
| !! | TATTTGAGGACTTTTAGATT+AGG | - | chr3_3:82565197-82565216 | Msa0478090:intron | 25.0% |
| !! | TTTTAGATTAGGAACAGTTA+TGG | - | chr3_3:82565208-82565227 | Msa0478090:intron | 25.0% |
| ! | ATGGAAGTGAAAAATAAACT+GGG | - | chr3_3:82565231-82565250 | Msa0478090:intron | 25.0% |
| !!! | AGAGAGAGTATTTCAAAATA+TGG | - | chr3_3:82565330-82565349 | Msa0478090:intron | 25.0% |
| ! | ATATTAGATCAACTTTACCA+CGG | + | chr3_3:82565404-82565423 | None:intergenic | 25.0% |
| ! | GTGTTAACAAGTTATAACAA+GGG | + | chr3_3:82565524-82565543 | None:intergenic | 25.0% |
| ! | AGTGTTAACAAGTTATAACA+AGG | + | chr3_3:82565525-82565544 | None:intergenic | 25.0% |
| ! | ATGATCTTAGATTGTATATC+TGG | - | chr3_3:82565609-82565628 | Msa0478090:intron | 25.0% |
| ! | ATTATGAAATTCAATTGCCA+TGG | + | chr3_3:82565669-82565688 | None:intergenic | 25.0% |
| ! | AAATTAGAAAGAGCAAAGTT+AGG | + | chr3_3:82565860-82565879 | None:intergenic | 25.0% |
| !!! | ATACTGTTTTTCTTTGGTTT+TGG | - | chr3_3:82565995-82566014 | Msa0478090:intron | 25.0% |
| !! | CCCATGTTTTATATACAATA+GGG | + | chr3_3:82566256-82566275 | None:intergenic | 25.0% |
| ! | CCCTATTGTATATAAAACAT+GGG | - | chr3_3:82566253-82566272 | Msa0478090:CDS | 25.0% |
| ! | ATTACATTTACATAGCATGA+TGG | + | chr3_3:82566393-82566412 | None:intergenic | 25.0% |
| ! | ATTGAATTTGGAAGTTTAGA+TGG | - | chr3_3:82566476-82566495 | Msa0478090:five_prime_UTR | 25.0% |
| CAATAATGTGAATCTCAAAC+TGG | + | chr3_3:82560156-82560175 | None:intergenic | 30.0% | |
| ! | ATTATTCCAAACGCGTTTTT+GGG | + | chr3_3:82560229-82560248 | None:intergenic | 30.0% |
| !!! | CTTTCAGTTTTTGGTTGATT+CGG | - | chr3_3:82560526-82560545 | Msa0478090:three_prime_UTR | 30.0% |
| !!! | TTTCAGTTTTTGGTTGATTC+GGG | - | chr3_3:82560527-82560546 | Msa0478090:three_prime_UTR | 30.0% |
| AAATTTGTGAGACTGATTGT+GGG | + | chr3_3:82560806-82560825 | None:intergenic | 30.0% | |
| AAAATTTGTGAGACTGATTG+TGG | + | chr3_3:82560807-82560826 | None:intergenic | 30.0% | |
| ! | CAATCAGTCTCACAAATTTT+TGG | - | chr3_3:82560807-82560826 | Msa0478090:intron | 30.0% |
| GATAGATTAATGCTTGTTCA+GGG | - | chr3_3:82561046-82561065 | Msa0478090:intron | 30.0% | |
| TTTCTTCTTTATTCGTGTAG+TGG | - | chr3_3:82561133-82561152 | Msa0478090:intron | 30.0% | |
| TGTAGAAATTGACAGTGAAA+TGG | - | chr3_3:82561467-82561486 | Msa0478090:intron | 30.0% | |
| GTAGAAATTGACAGTGAAAT+GGG | - | chr3_3:82561468-82561487 | Msa0478090:intron | 30.0% | |
| !! | GTGAAATGGGTTGAATATAA+TGG | - | chr3_3:82561481-82561500 | Msa0478090:CDS | 30.0% |
| !! | AATGGGTTGAATATAATGGT+AGG | - | chr3_3:82561485-82561504 | Msa0478090:CDS | 30.0% |
| ! | TGTAGAATTGTTGTTGTGAA+CGG | - | chr3_3:82561538-82561557 | Msa0478090:CDS | 30.0% |
| AATAATAATACCACCTCTCA+CGG | - | chr3_3:82561600-82561619 | Msa0478090:CDS | 30.0% | |
| GTAGAGTTTATAAAGGTTGT+TGG | + | chr3_3:82561667-82561686 | None:intergenic | 30.0% | |
| GGGAATTAAATAATGTTGAG+AGG | + | chr3_3:82561693-82561712 | None:intergenic | 30.0% | |
| CTCAACATTATTTAATTCCC+AGG | - | chr3_3:82561693-82561712 | Msa0478090:intron | 30.0% | |
| TTGTTTACTTTCATGCAGTA+CGG | + | chr3_3:82561861-82561880 | None:intergenic | 30.0% | |
| GCAAATCTATAGATATTCCT+TGG | + | chr3_3:82562372-82562391 | None:intergenic | 30.0% | |
| ! | GTATGCAAGCATATCTATTT+TGG | - | chr3_3:82562393-82562412 | Msa0478090:CDS | 30.0% |
| ATAAGAACCAAACTTACTTC+TGG | + | chr3_3:82562424-82562443 | None:intergenic | 30.0% | |
| GCAGAACATATAAAGGTAAA+AGG | + | chr3_3:82562456-82562475 | None:intergenic | 30.0% | |
| ! | TGTAAAGTTGAGTTTTCTTG+GGG | - | chr3_3:82562547-82562566 | Msa0478090:intron | 30.0% |
| TGCTATATAGCATGTATAGT+GGG | + | chr3_3:82562689-82562708 | None:intergenic | 30.0% | |
| ATGCTATATAGCATGTATAG+TGG | + | chr3_3:82562690-82562709 | None:intergenic | 30.0% | |
| CTAGGAATTATAGAGAATGT+AGG | - | chr3_3:82562715-82562734 | Msa0478090:CDS | 30.0% | |
| GAATTATAGAGAATGTAGGA+AGG | - | chr3_3:82562719-82562738 | Msa0478090:CDS | 30.0% | |
| TCGCATAATACACATAAGTT+TGG | - | chr3_3:82562798-82562817 | Msa0478090:intron | 30.0% | |
| ! | TTTGGTAAATGCATGTTTTG+AGG | - | chr3_3:82562816-82562835 | Msa0478090:intron | 30.0% |
| ! | AAGAAACATGTTTTTCTCCT+AGG | + | chr3_3:82562954-82562973 | None:intergenic | 30.0% |
| AGGAGAAAAACATGTTTCTT+TGG | - | chr3_3:82562954-82562973 | Msa0478090:CDS | 30.0% | |
| ! | TTTGAAATACACTTATCCAC+AGG | - | chr3_3:82563051-82563070 | Msa0478090:CDS | 30.0% |
| TTCATCAACATCATACAGAA+CGG | + | chr3_3:82563098-82563117 | None:intergenic | 30.0% | |
| CATATATTAACCTCGACATT+TGG | + | chr3_3:82563178-82563197 | None:intergenic | 30.0% | |
| CTATCATTATGAAGGGTTAA+TGG | + | chr3_3:82563263-82563282 | None:intergenic | 30.0% | |
| !! | GAAAGTGCTATCATTATGAA+GGG | + | chr3_3:82563270-82563289 | None:intergenic | 30.0% |
| ATCTAGAAACCAACATACTA+GGG | + | chr3_3:82563519-82563538 | None:intergenic | 30.0% | |
| AATCTAGAAACCAACATACT+AGG | + | chr3_3:82563520-82563539 | None:intergenic | 30.0% | |
| !! | TGTTGGTTTCTAGATTCTTT+AGG | - | chr3_3:82563524-82563543 | Msa0478090:CDS | 30.0% |
| ! | GTTGGTTTCTAGATTCTTTA+GGG | - | chr3_3:82563525-82563544 | Msa0478090:CDS | 30.0% |
| TAAGCCTCAAAAAAGACATA+TGG | + | chr3_3:82563904-82563923 | None:intergenic | 30.0% | |
| !! | ATGCTGATGATTTACTTTTG+TGG | - | chr3_3:82563959-82563978 | Msa0478090:intron | 30.0% |
| ACATGAACTAAATTCAGATG+AGG | + | chr3_3:82564050-82564069 | None:intergenic | 30.0% | |
| GAAACATAAATTTCCATTCC+CGG | + | chr3_3:82564384-82564403 | None:intergenic | 30.0% | |
| TACAAAAAGCTTGCCAAATT+GGG | - | chr3_3:82565053-82565072 | Msa0478090:intron | 30.0% | |
| ACAAAGCTTGTAATTTCACA+AGG | - | chr3_3:82565109-82565128 | Msa0478090:intron | 30.0% | |
| CAAAGCTTGTAATTTCACAA+GGG | - | chr3_3:82565110-82565129 | Msa0478090:intron | 30.0% | |
| GATGGAAGTGAAAAATAAAC+TGG | - | chr3_3:82565230-82565249 | Msa0478090:intron | 30.0% | |
| !! | GAGAGTATTTCAAAATATGG+TGG | - | chr3_3:82565333-82565352 | Msa0478090:CDS | 30.0% |
| TAACAAGTTATAACAAGGGA+GGG | + | chr3_3:82565520-82565539 | None:intergenic | 30.0% | |
| TTAACAAGTTATAACAAGGG+AGG | + | chr3_3:82565521-82565540 | None:intergenic | 30.0% | |
| ! | TTTTCTCTTCCTATCTTGTT+GGG | - | chr3_3:82565579-82565598 | Msa0478090:intron | 30.0% |
| CAAATTATCTTGAAGCAAGA+GGG | + | chr3_3:82565635-82565654 | None:intergenic | 30.0% | |
| AATTTGGCTATCAATTTCCA+TGG | - | chr3_3:82565649-82565668 | Msa0478090:intron | 30.0% | |
| TTCATAATCAAGTTTCTGAC+CGG | - | chr3_3:82565681-82565700 | Msa0478090:intron | 30.0% | |
| !!! | ATTAAGGTTTTGGAGAGTTT+TGG | - | chr3_3:82566170-82566189 | Msa0478090:intron | 30.0% |
| GCCCTATTGTATATAAAACA+TGG | - | chr3_3:82566252-82566271 | Msa0478090:CDS | 30.0% | |
| ! | GCCCATGTTTTATATACAAT+AGG | + | chr3_3:82566257-82566276 | None:intergenic | 30.0% |
| ! | ATATAGTCTTTTCAGCTAAG+TGG | - | chr3_3:82566414-82566433 | Msa0478090:five_prime_UTR | 30.0% |
| !!! | GTTGAAACAGATATTTTTGG+CGG | - | chr3_3:82566452-82566471 | Msa0478090:five_prime_UTR | 30.0% |
| AAAAAGGAAAAGGAAGAGAC+AGG | - | chr3_3:82560098-82560117 | Msa0478090:three_prime_UTR | 35.0% | |
| ! | TTATTCCAAACGCGTTTTTG+GGG | + | chr3_3:82560228-82560247 | None:intergenic | 35.0% |
| ! | GATTATTCCAAACGCGTTTT+TGG | + | chr3_3:82560230-82560249 | None:intergenic | 35.0% |
| ! | GATTGTTCAAGTTTGGAGAT+GGG | + | chr3_3:82560252-82560271 | None:intergenic | 35.0% |
| ! | TGATTGTTCAAGTTTGGAGA+TGG | + | chr3_3:82560253-82560272 | None:intergenic | 35.0% |
| ACAAAACCTATCTCAATTGC+TGG | - | chr3_3:82560373-82560392 | Msa0478090:three_prime_UTR | 35.0% | |
| TCTCAATCGTAACACTGAAT+TGG | - | chr3_3:82560411-82560430 | Msa0478090:three_prime_UTR | 35.0% | |
| !!! | TTCAGTTTTTGGTTGATTCG+GGG | - | chr3_3:82560528-82560547 | Msa0478090:three_prime_UTR | 35.0% |
| AGAAATAAGTGACCTGATCA+AGG | + | chr3_3:82560604-82560623 | None:intergenic | 35.0% | |
| CGATAGATTAATGCTTGTTC+AGG | - | chr3_3:82561045-82561064 | Msa0478090:intron | 35.0% | |
| !! | AATGCCGTCATTTTCACTTT+TGG | - | chr3_3:82561292-82561311 | Msa0478090:intron | 35.0% |
| AGAGCCAAAAGTGAAAATGA+CGG | + | chr3_3:82561299-82561318 | None:intergenic | 35.0% | |
| ! | TTTTCACAATATGCAAGCAC+TGG | + | chr3_3:82561364-82561383 | None:intergenic | 35.0% |
| TAATGGTAGGAACTTAAAGC+AGG | - | chr3_3:82561498-82561517 | Msa0478090:CDS | 35.0% | |
| ATAATAATACCACCTCTCAC+GGG | - | chr3_3:82561601-82561620 | Msa0478090:CDS | 35.0% | |
| TTGTTGGAAATAAACTCACC+AGG | + | chr3_3:82561651-82561670 | None:intergenic | 35.0% | |
| GAGGTCTGTAGAGTTTATAA+AGG | + | chr3_3:82561674-82561693 | None:intergenic | 35.0% | |
| CAAGAATGCACTAACCAAAA+TGG | + | chr3_3:82561899-82561918 | None:intergenic | 35.0% | |
| TTTGGTTAGTGCATTCTTGT+AGG | - | chr3_3:82561900-82561919 | Msa0478090:CDS | 35.0% | |
| GTGGTTGTTCTATAAGTGTT+CGG | - | chr3_3:82562061-82562080 | Msa0478090:CDS | 35.0% | |
| TAAGCATAATTGCAGGTTCA+TGG | - | chr3_3:82562101-82562120 | Msa0478090:CDS | 35.0% | |
| TATCACCTCTCGATTTACAT+AGG | + | chr3_3:82562165-82562184 | None:intergenic | 35.0% | |
| CCTCCATTTAGTAAAATCCT+CGG | - | chr3_3:82562205-82562224 | Msa0478090:CDS | 35.0% | |
| ! | ATGCCGAGGATTTTACTAAA+TGG | + | chr3_3:82562211-82562230 | None:intergenic | 35.0% |
| CTAAAATATAACTGATGCCG+AGG | + | chr3_3:82562225-82562244 | None:intergenic | 35.0% | |
| TAACTTCTTCCATTTCAGCA+AGG | + | chr3_3:82562297-82562316 | None:intergenic | 35.0% | |
| !! | AAGTTTGGTTCTTATTCAGC+AGG | - | chr3_3:82562429-82562448 | Msa0478090:CDS | 35.0% |
| !! | AGTTTGGTTCTTATTCAGCA+GGG | - | chr3_3:82562430-82562449 | Msa0478090:CDS | 35.0% |
| TCTCTTGGGTGAAGAATTTA+GGG | - | chr3_3:82562497-82562516 | Msa0478090:intron | 35.0% | |
| AATTCAAGCATGCCAAAAAC+AGG | + | chr3_3:82562639-82562658 | None:intergenic | 35.0% | |
| TGCTATATAGCATGTCTTCT+AGG | - | chr3_3:82562697-82562716 | Msa0478090:CDS | 35.0% | |
| GCAGCACACTAATCTAATAT+AGG | + | chr3_3:82562772-82562791 | None:intergenic | 35.0% | |
| TATGTGTATTATGCGAACGT+TGG | + | chr3_3:82562794-82562813 | None:intergenic | 35.0% | |
| CAAACTGTTCGAAGTCTTAA+TGG | - | chr3_3:82563118-82563137 | Msa0478090:CDS | 35.0% | |
| ! | TAAACTTGTTCCAAATGTCG+AGG | - | chr3_3:82563165-82563184 | Msa0478090:CDS | 35.0% |
| !! | CGAAAGTGCTATCATTATGA+AGG | + | chr3_3:82563271-82563290 | None:intergenic | 35.0% |
| AACATAAATGCTCATGCCAT+TGG | + | chr3_3:82563389-82563408 | None:intergenic | 35.0% | |
| TCGAAATGAGGTAACAAAGA+TGG | + | chr3_3:82563413-82563432 | None:intergenic | 35.0% | |
| TACCTCATTTCGATGTGTTT+AGG | - | chr3_3:82563420-82563439 | Msa0478090:intron | 35.0% | |
| AACCTAAACACATCGAAATG+AGG | + | chr3_3:82563425-82563444 | None:intergenic | 35.0% | |
| ! | TTTCGATGTGTTTAGGTTAC+TGG | - | chr3_3:82563427-82563446 | Msa0478090:intron | 35.0% |
| ATTCCTTGGAGGAGTAAATT+GGG | - | chr3_3:82563450-82563469 | Msa0478090:intron | 35.0% | |
| ACATACTAGGGATTGCATTA+GGG | + | chr3_3:82563507-82563526 | None:intergenic | 35.0% | |
| AACATACTAGGGATTGCATT+AGG | + | chr3_3:82563508-82563527 | None:intergenic | 35.0% | |
| TAATGCAATCCCTAGTATGT+TGG | - | chr3_3:82563507-82563526 | Msa0478090:CDS | 35.0% | |
| ACGAACTGCATTTACCTATA+TGG | - | chr3_3:82563602-82563621 | Msa0478090:intron | 35.0% | |
| CGAACTGCATTTACCTATAT+GGG | - | chr3_3:82563603-82563622 | Msa0478090:intron | 35.0% | |
| TTGAGCTTAACAAATCACAG+TGG | - | chr3_3:82563863-82563882 | Msa0478090:intron | 35.0% | |
| !!! | TCAGCCATATGTCTTTTTTG+AGG | - | chr3_3:82563897-82563916 | Msa0478090:intron | 35.0% |
| !! | GATGATTTACTTTTGTGGAG+AGG | - | chr3_3:82563964-82563983 | Msa0478090:intron | 35.0% |
| !! | ATTTACTTTTGTGGAGAGGT+TGG | - | chr3_3:82563968-82563987 | Msa0478090:intron | 35.0% |
| !! | TTTACTTTTGTGGAGAGGTT+GGG | - | chr3_3:82563969-82563988 | Msa0478090:intron | 35.0% |
| CATACAAAACTGTACCTTCA+AGG | + | chr3_3:82564019-82564038 | None:intergenic | 35.0% | |
| !! | TGAAGGTACAGTTTTGTATG+AGG | - | chr3_3:82564019-82564038 | Msa0478090:intron | 35.0% |
| TATGTATGTATACTGGAAGC+CGG | - | chr3_3:82564362-82564381 | Msa0478090:CDS | 35.0% | |
| CATCTGGAAAAACAAATGCA+GGG | + | chr3_3:82564428-82564447 | None:intergenic | 35.0% | |
| GCTTAACATCCATCATTTCA+GGG | + | chr3_3:82564572-82564591 | None:intergenic | 35.0% | |
| AGTTGTACTAGTAAATTGGG+TGG | - | chr3_3:82564654-82564673 | Msa0478090:intron | 35.0% | |
| ATACACTCGATACTCATTTG+AGG | + | chr3_3:82564684-82564703 | None:intergenic | 35.0% | |
| !! | ATGAGTATCGAGTGTATTGA+AGG | - | chr3_3:82564687-82564706 | Msa0478090:intron | 35.0% |
| !! | TGAGTATCGAGTGTATTGAA+GGG | - | chr3_3:82564688-82564707 | Msa0478090:intron | 35.0% |
| CTTGATTTCACAATTGCTGT+CGG | + | chr3_3:82564745-82564764 | None:intergenic | 35.0% | |
| TGTGAAATCAAGTCATCTGA+TGG | - | chr3_3:82564753-82564772 | Msa0478090:intron | 35.0% | |
| ! | GACTTTAGAAGTTCAGAATG+AGG | - | chr3_3:82564869-82564888 | Msa0478090:intron | 35.0% |
| TGGACACCAACTTCTAATTA+AGG | + | chr3_3:82564959-82564978 | None:intergenic | 35.0% | |
| !! | TCATTGACTCCATTCTGAAA+TGG | + | chr3_3:82564979-82564998 | None:intergenic | 35.0% |
| ATTTCAGAATGGAGTCAATG+AGG | - | chr3_3:82564978-82564997 | Msa0478090:intron | 35.0% | |
| !! | TGACTTTTGTTTGCTTGGAA+AGG | - | chr3_3:82565016-82565035 | Msa0478090:intron | 35.0% |
| !! | GACTTTTGTTTGCTTGGAAA+GGG | - | chr3_3:82565017-82565036 | Msa0478090:intron | 35.0% |
| CTACAAAAAGCTTGCCAAAT+TGG | - | chr3_3:82565052-82565071 | Msa0478090:intron | 35.0% | |
| ! | GAGGTGAGTTTCTTTATTTG+AGG | - | chr3_3:82565183-82565202 | Msa0478090:intron | 35.0% |
| AGATTAGGAACAGTTATGGA+TGG | - | chr3_3:82565212-82565231 | Msa0478090:intron | 35.0% | |
| AACAAGTTATAACAAGGGAG+GGG | + | chr3_3:82565519-82565538 | None:intergenic | 35.0% | |
| AGATAGGAAGAGAAAAGGAA+CGG | + | chr3_3:82565575-82565594 | None:intergenic | 35.0% | |
| CAACAAGATAGGAAGAGAAA+AGG | + | chr3_3:82565580-82565599 | None:intergenic | 35.0% | |
| ! | CTTTTCTCTTCCTATCTTGT+TGG | - | chr3_3:82565578-82565597 | Msa0478090:intron | 35.0% |
| ATAGTAAGACCCAACAAGAT+AGG | + | chr3_3:82565591-82565610 | None:intergenic | 35.0% | |
| CCAAATTATCTTGAAGCAAG+AGG | + | chr3_3:82565636-82565655 | None:intergenic | 35.0% | |
| CCTCTTGCTTCAAGATAATT+TGG | - | chr3_3:82565633-82565652 | Msa0478090:intron | 35.0% | |
| CTCTATACACAAAACAAGTC+AGG | + | chr3_3:82565772-82565791 | None:intergenic | 35.0% | |
| !!! | GACTTGTTTTGTGTATAGAG+AGG | - | chr3_3:82565772-82565791 | Msa0478090:intron | 35.0% |
| AATGAAACAAAAGGAAGGTC+TGG | + | chr3_3:82565806-82565825 | None:intergenic | 35.0% | |
| ! | GAGTGTATAAGTTGAAGATG+AGG | - | chr3_3:82565912-82565931 | Msa0478090:intron | 35.0% |
| ! | TATAAGTTGAAGATGAGGCT+AGG | - | chr3_3:82565917-82565936 | Msa0478090:intron | 35.0% |
| ! | TTTTTGCAGAAGCTTGTGAA+AGG | - | chr3_3:82565946-82565965 | Msa0478090:intron | 35.0% |
| !!! | TTCTTTGGTTTTGGCTTTGT+AGG | - | chr3_3:82566004-82566023 | Msa0478090:intron | 35.0% |
| ! | GCTTTGTAGGAGGATAATTT+TGG | - | chr3_3:82566017-82566036 | Msa0478090:intron | 35.0% |
| !!! | TAATTTTGGAGTGCATCTCA+TGG | - | chr3_3:82566031-82566050 | Msa0478090:intron | 35.0% |
| TGCAAAATCTTATGCTACAC+TGG | - | chr3_3:82566061-82566080 | Msa0478090:CDS | 35.0% | |
| GCAAAATCTTATGCTACACT+GGG | - | chr3_3:82566062-82566081 | Msa0478090:CDS | 35.0% | |
| CAAAATCTTATGCTACACTG+GGG | - | chr3_3:82566063-82566082 | Msa0478090:CDS | 35.0% | |
| TGAAGAGCTGATACAAACAA+TGG | - | chr3_3:82566136-82566155 | Msa0478090:intron | 35.0% | |
| AATGGAGGCTAATCAGATTA+AGG | - | chr3_3:82566154-82566173 | Msa0478090:intron | 35.0% | |
| ! | GGCTAATCAGATTAAGGTTT+TGG | - | chr3_3:82566160-82566179 | Msa0478090:intron | 35.0% |
| TACATTGATGAACAGCATGA+TGG | - | chr3_3:82566207-82566226 | Msa0478090:intron | 35.0% | |
| !! | GATGGAGATGCTTTAAAATG+CGG | - | chr3_3:82566225-82566244 | Msa0478090:CDS | 35.0% |
| !! | ATGATGGATGTATCAATCAC+AGG | + | chr3_3:82566377-82566396 | None:intergenic | 35.0% |
| !!! | ATTTTTGGCGGCATTGAATT+TGG | - | chr3_3:82566464-82566483 | Msa0478090:five_prime_UTR | 35.0% |
| !! | AAACGCGTTTTTGGGGAATT+GGG | + | chr3_3:82560221-82560240 | None:intergenic | 40.0% |
| ! | GGAAGCTGATTGTTCAAGTT+TGG | + | chr3_3:82560259-82560278 | None:intergenic | 40.0% |
| CAATCAGCTTCCAACGATAA+TGG | - | chr3_3:82560267-82560286 | Msa0478090:three_prime_UTR | 40.0% | |
| !! | TTGTTGGCTTGTTCTTGTTG+TGG | + | chr3_3:82560343-82560362 | None:intergenic | 40.0% |
| GTTACGATTGAGATCAGCTT+CGG | + | chr3_3:82560404-82560423 | None:intergenic | 40.0% | |
| TCGTAACACTGAATTGGAGA+AGG | - | chr3_3:82560417-82560436 | Msa0478090:three_prime_UTR | 40.0% | |
| AACACTGAATTGGAGAAGGT+TGG | - | chr3_3:82560421-82560440 | Msa0478090:three_prime_UTR | 40.0% | |
| AATAAGTGACCTGATCAAGG+CGG | + | chr3_3:82560601-82560620 | None:intergenic | 40.0% | |
| CAATGTGACACATTGTCGAA+CGG | - | chr3_3:82560983-82561002 | Msa0478090:intron | 40.0% | |
| AATGTGACACATTGTCGAAC+GGG | - | chr3_3:82560984-82561003 | Msa0478090:intron | 40.0% | |
| GTGTATCGAAGAACAATGTC+AGG | - | chr3_3:82561017-82561036 | Msa0478090:intron | 40.0% | |
| ATTATAGTACCGTTGGCGTT+GGG | + | chr3_3:82561090-82561109 | None:intergenic | 40.0% | |
| CAACGGTACTATAATGCGAT+GGG | - | chr3_3:82561095-82561114 | Msa0478090:intron | 40.0% | |
| AACGGTACTATAATGCGATG+GGG | - | chr3_3:82561096-82561115 | Msa0478090:intron | 40.0% | |
| !! | TTTATTCGTGTAGTGGACTG+AGG | - | chr3_3:82561140-82561159 | Msa0478090:intron | 40.0% |
| AATGCAGATCGTGAAAAGCT+GGG | - | chr3_3:82561216-82561235 | Msa0478090:intron | 40.0% | |
| ACTGGAAGGATCAAGGAAAA+AGG | + | chr3_3:82561346-82561365 | None:intergenic | 40.0% | |
| ! | TCTCCTGATTATTTGGAGTC+TGG | - | chr3_3:82561412-82561431 | Msa0478090:intron | 40.0% |
| ! | CGGGACACCTGATATATTTT+TGG | - | chr3_3:82561620-82561639 | Msa0478090:CDS | 40.0% |
| TTCAAAACTCTACAGACCCT+GGG | + | chr3_3:82561713-82561732 | None:intergenic | 40.0% | |
| AGTCACTGTCAACAAATGAC+TGG | - | chr3_3:82561777-82561796 | Msa0478090:CDS | 40.0% | |
| ACTGTCAACAAATGACTGGT+AGG | - | chr3_3:82561781-82561800 | Msa0478090:CDS | 40.0% | |
| GAATGCACTAACCAAAATGG+AGG | + | chr3_3:82561896-82561915 | None:intergenic | 40.0% | |
| GACATAGACACTTTGTGCAT+CGG | - | chr3_3:82562134-82562153 | Msa0478090:CDS | 40.0% | |
| TCCTTCCTATGTAAATCGAG+AGG | - | chr3_3:82562157-82562176 | Msa0478090:CDS | 40.0% | |
| ACCTCTCGATTTACATAGGA+AGG | + | chr3_3:82562161-82562180 | None:intergenic | 40.0% | |
| ! | CCGAGGATTTTACTAAATGG+AGG | + | chr3_3:82562208-82562227 | None:intergenic | 40.0% |
| GTCTCTTGGGTGAAGAATTT+AGG | - | chr3_3:82562496-82562515 | Msa0478090:intron | 40.0% | |
| ! | TTGAGTTTTCTTGGGGTGTA+TGG | - | chr3_3:82562554-82562573 | Msa0478090:intron | 40.0% |
| CAGTACACAGAATGAAGACA+TGG | + | chr3_3:82562592-82562611 | None:intergenic | 40.0% | |
| TAAGAATTTGATCCGCCACT+CGG | + | chr3_3:82563147-82563166 | None:intergenic | 40.0% | |
| !!! | AAGTTTTGGGCTAAAAGACG+TGG | - | chr3_3:82563310-82563329 | Msa0478090:intron | 40.0% |
| ! | GTTTAGGTTACTGGATTCCT+TGG | - | chr3_3:82563436-82563455 | Msa0478090:intron | 40.0% |
| GATTCCTTGGAGGAGTAAAT+TGG | - | chr3_3:82563449-82563468 | Msa0478090:intron | 40.0% | |
| !! | TCTTTAGGGTCTATTCACAG+TGG | - | chr3_3:82563539-82563558 | Msa0478090:CDS | 40.0% |
| CTATAGGGCATAGCATTACA+GGG | + | chr3_3:82563576-82563595 | None:intergenic | 40.0% | |
| TCTATAGGGCATAGCATTAC+AGG | + | chr3_3:82563577-82563596 | None:intergenic | 40.0% | |
| GCAGTTCGTTCTCTTCTATA+GGG | + | chr3_3:82563591-82563610 | None:intergenic | 40.0% | |
| TGCAGTTCGTTCTCTTCTAT+AGG | + | chr3_3:82563592-82563611 | None:intergenic | 40.0% | |
| TAATGTGATACCTGTCCCTA+TGG | + | chr3_3:82563642-82563661 | None:intergenic | 40.0% | |
| GGGTATGCAGGAGTAATTAT+TGG | + | chr3_3:82563667-82563686 | None:intergenic | 40.0% | |
| TGTAGCTGGAATTCATGCAA+GGG | + | chr3_3:82563687-82563706 | None:intergenic | 40.0% | |
| TTGTAGCTGGAATTCATGCA+AGG | + | chr3_3:82563688-82563707 | None:intergenic | 40.0% | |
| AAGCACTCTTCGTGTTATGA+TGG | - | chr3_3:82563717-82563736 | Msa0478090:intron | 40.0% | |
| ! | ATGATGGAACAGTTCTGCTA+TGG | - | chr3_3:82563733-82563752 | Msa0478090:intron | 40.0% |
| TAGTTCATGTCTCATGTCTG+CGG | - | chr3_3:82564060-82564079 | Msa0478090:intron | 40.0% | |
| AGATAGAGCGAGATACAAGT+GGG | - | chr3_3:82564175-82564194 | Msa0478090:intron | 40.0% | |
| TCTGCATACTCATGTGGATA+AGG | + | chr3_3:82564216-82564235 | None:intergenic | 40.0% | |
| AAAAATGCAGAATGCGCACA+AGG | + | chr3_3:82564249-82564268 | None:intergenic | 40.0% | |
| ! | TGCGCATTCTGCATTTTTCA+TGG | - | chr3_3:82564251-82564270 | Msa0478090:CDS | 40.0% |
| ! | GCGCATTCTGCATTTTTCAT+GGG | - | chr3_3:82564252-82564271 | Msa0478090:CDS | 40.0% |
| ATGGGCTTGCAAAGAAAAGA+GGG | - | chr3_3:82564270-82564289 | Msa0478090:CDS | 40.0% | |
| CAAAGAAAAGAGGGAGTAAG+AGG | - | chr3_3:82564279-82564298 | Msa0478090:CDS | 40.0% | |
| ATGTATGTATACTGGAAGCC+GGG | - | chr3_3:82564363-82564382 | Msa0478090:CDS | 40.0% | |
| CCATCTGGAAAAACAAATGC+AGG | + | chr3_3:82564429-82564448 | None:intergenic | 40.0% | |
| !! | CCTGCATTTGTTTTTCCAGA+TGG | - | chr3_3:82564426-82564445 | Msa0478090:intron | 40.0% |
| GAAGAAGAACCCTGAAATGA+TGG | - | chr3_3:82564560-82564579 | Msa0478090:intron | 40.0% | |
| GGCTTAACATCCATCATTTC+AGG | + | chr3_3:82564573-82564592 | None:intergenic | 40.0% | |
| !! | GAGTATCGAGTGTATTGAAG+GGG | - | chr3_3:82564689-82564708 | Msa0478090:intron | 40.0% |
| AGTGGTACAATTACTGACGT+AGG | - | chr3_3:82564786-82564805 | Msa0478090:intron | 40.0% | |
| !! | TTGTTGACTCCACTCATGAT+AGG | - | chr3_3:82564835-82564854 | Msa0478090:intron | 40.0% |
| TGATTTCAGCCTATCATGAG+TGG | + | chr3_3:82564847-82564866 | None:intergenic | 40.0% | |
| CTCATGATAGGCTGAAATCA+AGG | - | chr3_3:82564847-82564866 | Msa0478090:intron | 40.0% | |
| TGAACCAAACAACTTCCGAA+GGG | + | chr3_3:82564927-82564946 | None:intergenic | 40.0% | |
| ATGAACCAAACAACTTCCGA+AGG | + | chr3_3:82564928-82564947 | None:intergenic | 40.0% | |
| ! | AGTTGGTGTCCATTTCAGAA+TGG | - | chr3_3:82564967-82564986 | Msa0478090:intron | 40.0% |
| !! | GGACATGACTTTTGTTTGCT+TGG | - | chr3_3:82565011-82565030 | Msa0478090:intron | 40.0% |
| TTTCACAAGGGCAGAATGTA+CGG | - | chr3_3:82565122-82565141 | Msa0478090:intron | 40.0% | |
| TCTGAGAGATAGTGAGAGTA+AGG | - | chr3_3:82565257-82565276 | Msa0478090:intron | 40.0% | |
| CTGAGAGATAGTGAGAGTAA+GGG | - | chr3_3:82565258-82565277 | Msa0478090:intron | 40.0% | |
| CTCTCTATTCAGAACTGATC+AGG | + | chr3_3:82565316-82565335 | None:intergenic | 40.0% | |
| ! | TAATCTCTCTGTTTTCTCCG+TGG | - | chr3_3:82565384-82565403 | Msa0478090:CDS | 40.0% |
| TGGAAACATAGCACGTATAG+TGG | + | chr3_3:82565732-82565751 | None:intergenic | 40.0% | |
| AGGTTGTTAAGCACAGTTAC+TGG | + | chr3_3:82565752-82565771 | None:intergenic | 40.0% | |
| GTATAGACAGATGTCAGACT+CGG | - | chr3_3:82565889-82565908 | Msa0478090:intron | 40.0% | |
| TATAGACAGATGTCAGACTC+GGG | - | chr3_3:82565890-82565909 | Msa0478090:intron | 40.0% | |
| !!! | TTTGGTTTTGGCTTTGTAGG+AGG | - | chr3_3:82566007-82566026 | Msa0478090:intron | 40.0% |
| AGAGCTGATACAAACAATGG+AGG | - | chr3_3:82566139-82566158 | Msa0478090:intron | 40.0% | |
| !!! | GGTTTTGGAGAGTTTTGGAA+TGG | - | chr3_3:82566175-82566194 | Msa0478090:intron | 40.0% |
| TAACATATTTGCGTACCCAG+AGG | - | chr3_3:82566314-82566333 | Msa0478090:CDS | 40.0% | |
| !! | TTTGTTGTTTGCTTGCGATG+TGG | - | chr3_3:82566344-82566363 | Msa0478090:CDS | 40.0% |
| AAGGAAGAGACAGGTGTGAT+TGG | - | chr3_3:82560107-82560126 | Msa0478090:three_prime_UTR | 45.0% | |
| AAGAGACAGGTGTGATTGGT+TGG | - | chr3_3:82560111-82560130 | Msa0478090:three_prime_UTR | 45.0% | |
| !! | AGAAAGTCAAGGGAGCGTTT+GGG | + | chr3_3:82560189-82560208 | None:intergenic | 45.0% |
| GGTTTGGAGGAGAAAGTCAA+GGG | + | chr3_3:82560199-82560218 | None:intergenic | 45.0% | |
| !! | GTTTTTGGGGAATTGGGGTT+TGG | + | chr3_3:82560215-82560234 | None:intergenic | 45.0% |
| !! | AACGCGTTTTTGGGGAATTG+GGG | + | chr3_3:82560220-82560239 | None:intergenic | 45.0% |
| !! | CAAACGCGTTTTTGGGGAAT+TGG | + | chr3_3:82560222-82560241 | None:intergenic | 45.0% |
| CAATTCCCCAAAAACGCGTT+TGG | - | chr3_3:82560220-82560239 | Msa0478090:three_prime_UTR | 45.0% | |
| ! | TCAGCTTCCAACGATAATGG+TGG | - | chr3_3:82560270-82560289 | Msa0478090:three_prime_UTR | 45.0% |
| TCGGAAACCACCATTATCGT+TGG | + | chr3_3:82560280-82560299 | None:intergenic | 45.0% | |
| !! | TTGGCTTGTTCTTGTTGTGG+CGG | + | chr3_3:82560340-82560359 | None:intergenic | 45.0% |
| AGAAGCTGCAAGTAGAGAAG+AGG | - | chr3_3:82560568-82560587 | Msa0478090:CDS | 45.0% | |
| CGTTCGACAATGTGTCACAT+TGG | + | chr3_3:82560985-82561004 | None:intergenic | 45.0% | |
| ATGTGACACATTGTCGAACG+GGG | - | chr3_3:82560985-82561004 | Msa0478090:intron | 45.0% | |
| TTATAGTACCGTTGGCGTTG+GGG | + | chr3_3:82561089-82561108 | None:intergenic | 45.0% | |
| CATTATAGTACCGTTGGCGT+TGG | + | chr3_3:82561091-82561110 | None:intergenic | 45.0% | |
| CCATCGCATTATAGTACCGT+TGG | + | chr3_3:82561097-82561116 | None:intergenic | 45.0% | |
| CCAACGGTACTATAATGCGA+TGG | - | chr3_3:82561094-82561113 | Msa0478090:intron | 45.0% | |
| GTACTATAATGCGATGGGGA+TGG | - | chr3_3:82561100-82561119 | Msa0478090:intron | 45.0% | |
| ! | CTTTTCACGATCTGCATTGC+AGG | + | chr3_3:82561214-82561233 | None:intergenic | 45.0% |
| CAATGCAGATCGTGAAAAGC+TGG | - | chr3_3:82561215-82561234 | Msa0478090:intron | 45.0% | |
| CTACACAGATCAGATGGTTG+AGG | - | chr3_3:82561264-82561283 | Msa0478090:intron | 45.0% | |
| !!! | ACTTTTGGCTCTTACCGACT+AGG | - | chr3_3:82561307-82561326 | Msa0478090:intron | 45.0% |
| !!! | CTTTTGGCTCTTACCGACTA+GGG | - | chr3_3:82561308-82561327 | Msa0478090:intron | 45.0% |
| !!! | TTTTGGCTCTTACCGACTAG+GGG | - | chr3_3:82561309-82561328 | Msa0478090:intron | 45.0% |
| !! | CACAATATGCAAGCACTGGA+AGG | + | chr3_3:82561360-82561379 | None:intergenic | 45.0% |
| CCTCCAGACTCCAAATAATC+AGG | + | chr3_3:82561418-82561437 | None:intergenic | 45.0% | |
| ! | CCTGATTATTTGGAGTCTGG+AGG | - | chr3_3:82561415-82561434 | Msa0478090:intron | 45.0% |
| TGGTAGGAACTTAAAGCAGG+AGG | - | chr3_3:82561501-82561520 | Msa0478090:CDS | 45.0% | |
| CTTCAAAACTCTACAGACCC+TGG | + | chr3_3:82561714-82561733 | None:intergenic | 45.0% | |
| GTCAACAAATGACTGGTAGG+CGG | - | chr3_3:82561784-82561803 | Msa0478090:CDS | 45.0% | |
| CACTAACCAAAATGGAGGAG+GGG | + | chr3_3:82561891-82561910 | None:intergenic | 45.0% | |
| GCACTAACCAAAATGGAGGA+GGG | + | chr3_3:82561892-82561911 | None:intergenic | 45.0% | |
| TGCACTAACCAAAATGGAGG+AGG | + | chr3_3:82561893-82561912 | None:intergenic | 45.0% | |
| TAATTGCAGGTTCATGGACC+TGG | - | chr3_3:82562107-82562126 | Msa0478090:CDS | 45.0% | |
| ! | AAAGTGTCTATGTCCACTCC+AGG | + | chr3_3:82562128-82562147 | None:intergenic | 45.0% |
| GCACAACATCCTTGCTGAAA+TGG | - | chr3_3:82562285-82562304 | Msa0478090:CDS | 45.0% | |
| ATTACTGGGACATGTGCATC+AGG | + | chr3_3:82562337-82562356 | None:intergenic | 45.0% | |
| GGTTGTGCCAGAAGTAAGTT+TGG | - | chr3_3:82562414-82562433 | Msa0478090:CDS | 45.0% | |
| TGGCATAGCGGTAACAGATA+TGG | + | chr3_3:82562911-82562930 | None:intergenic | 45.0% | |
| GGCATAAATGGATGGCATAG+CGG | + | chr3_3:82562923-82562942 | None:intergenic | 45.0% | |
| ATACACTTATCCACAGGACC+TGG | - | chr3_3:82563057-82563076 | Msa0478090:CDS | 45.0% | |
| AAGTCTTAATGGTTGCCGAG+TGG | - | chr3_3:82563129-82563148 | Msa0478090:CDS | 45.0% | |
| TAGGTTACTGGATTCCTTGG+AGG | - | chr3_3:82563439-82563458 | Msa0478090:intron | 45.0% | |
| TAGCCCAATTTACTCCTCCA+AGG | + | chr3_3:82563456-82563475 | None:intergenic | 45.0% | |
| GGATTGCATTAGGGTAAAGC+TGG | + | chr3_3:82563498-82563517 | None:intergenic | 45.0% | |
| TTAGGGTCTATTCACAGTGG+CGG | - | chr3_3:82563542-82563561 | Msa0478090:CDS | 45.0% | |
| TTTCTGCGAGGATCCCATAT+AGG | + | chr3_3:82563619-82563638 | None:intergenic | 45.0% | |
| ! | GAATTCATGCAAGGGTATGC+AGG | + | chr3_3:82563679-82563698 | None:intergenic | 45.0% |
| ! | TCAAGGTTAGCTGTCTTAGC+CGG | + | chr3_3:82564002-82564021 | None:intergenic | 45.0% |
| GCTAAGACAGCTAACCTTGA+AGG | - | chr3_3:82564002-82564021 | Msa0478090:intron | 45.0% | |
| CAGATAGAGCGAGATACAAG+TGG | - | chr3_3:82564174-82564193 | Msa0478090:intron | 45.0% | |
| CATGGGCTTGCAAAGAAAAG+AGG | - | chr3_3:82564269-82564288 | Msa0478090:CDS | 45.0% | |
| GGACAGCAGTTTGATATACG+TGG | - | chr3_3:82564309-82564328 | Msa0478090:CDS | 45.0% | |
| GCCTAGGCATATAAACCATG+CGG | - | chr3_3:82564467-82564486 | Msa0478090:intron | 45.0% | |
| AAACCATGCGGCTGAGAAAA+TGG | - | chr3_3:82564479-82564498 | Msa0478090:intron | 45.0% | |
| AACCATGCGGCTGAGAAAAT+GGG | - | chr3_3:82564480-82564499 | Msa0478090:intron | 45.0% | |
| GATACGACAAAGTGCAACTC+TGG | - | chr3_3:82564507-82564526 | Msa0478090:CDS | 45.0% | |
| ! | CTTCTGAAAGGTCCATCAAG+AGG | - | chr3_3:82564538-82564557 | Msa0478090:intron | 45.0% |
| AGGGTTCTTCTTCCTCTTGA+TGG | + | chr3_3:82564553-82564572 | None:intergenic | 45.0% | |
| AGCCAGATAAACCAGAGAAG+CGG | - | chr3_3:82564589-82564608 | Msa0478090:intron | 45.0% | |
| AAACACACTCTAGCCTCTGT+GGG | + | chr3_3:82564626-82564645 | None:intergenic | 45.0% | |
| TCGAGTGTATTGAAGGGGTT+AGG | - | chr3_3:82564694-82564713 | Msa0478090:intron | 45.0% | |
| ATTGAAGGGGTTAGGCTAGA+TGG | - | chr3_3:82564702-82564721 | Msa0478090:intron | 45.0% | |
| !! | AAGTCATCTGATGGACTCTC+AGG | - | chr3_3:82564762-82564781 | Msa0478090:intron | 45.0% |
| TAAGAAGCCTGCTGAATCAG+CGG | - | chr3_3:82564892-82564911 | Msa0478090:intron | 45.0% | |
| GAGTCAATGAGGACAAAGCT+CGG | - | chr3_3:82564989-82565008 | Msa0478090:intron | 45.0% | |
| AGTCAATGAGGACAAAGCTC+GGG | - | chr3_3:82564990-82565009 | Msa0478090:intron | 45.0% | |
| AAGCTTGCCAAATTGGGAAG+AGG | - | chr3_3:82565059-82565078 | Msa0478090:intron | 45.0% | |
| AGCTTGCCAAATTGGGAAGA+GGG | - | chr3_3:82565060-82565079 | Msa0478090:intron | 45.0% | |
| AGAAACTCACCTCGCAATTG+AGG | + | chr3_3:82565176-82565195 | None:intergenic | 45.0% | |
| AGAGTAAGGGAACTTTGCAG+AGG | - | chr3_3:82565271-82565290 | Msa0478090:intron | 45.0% | |
| GAGTAAGGGAACTTTGCAGA+GGG | - | chr3_3:82565272-82565291 | Msa0478090:intron | 45.0% | |
| ! | TTGCAGAGGGTGATGTTTTG+TGG | - | chr3_3:82565285-82565304 | Msa0478090:intron | 45.0% |
| ATGGTGGCTGAAGAAGTTGA+AGG | - | chr3_3:82565349-82565368 | Msa0478090:CDS | 45.0% | |
| GTTTCTGACCGGTGAATATG+TGG | - | chr3_3:82565692-82565711 | Msa0478090:intron | 45.0% | |
| ACAAAAGGAAGGTCTGGTCT+CGG | + | chr3_3:82565800-82565819 | None:intergenic | 45.0% | |
| !! | TGTTGCTTTGCTGAGGTACT+GGG | - | chr3_3:82566087-82566106 | Msa0478090:CDS | 45.0% |
| !! | TTTGCTGAGGTACTGGGAAT+GGG | - | chr3_3:82566093-82566112 | Msa0478090:CDS | 45.0% |
| ATATTTGCGTACCCAGAGGT+GGG | - | chr3_3:82566318-82566337 | Msa0478090:CDS | 45.0% | |
| ACAACAAAGTTCCCACCTCT+GGG | + | chr3_3:82566332-82566351 | None:intergenic | 45.0% | |
| AACAACAAAGTTCCCACCTC+TGG | + | chr3_3:82566333-82566352 | None:intergenic | 45.0% | |
| TCAATCTGCAGCGATTTCGT+TGG | - | chr3_3:82566508-82566527 | Msa0478090:five_prime_UTR | 45.0% | |
| !!! | TTAAAAAAATATTTTTTGAA+GGG | + | chr3_3:82560947-82560966 | None:intergenic | 5.0% |
| !!! | ATTAAAAAAATATTTTTTGA+AGG | + | chr3_3:82560948-82560967 | None:intergenic | 5.0% |
| ! | ACAGGTGTGATTGGTTGGAG+TGG | - | chr3_3:82560116-82560135 | Msa0478090:three_prime_UTR | 50.0% |
| ! | CAGGTGTGATTGGTTGGAGT+GGG | - | chr3_3:82560117-82560136 | Msa0478090:three_prime_UTR | 50.0% |
| !! | GAGAAAGTCAAGGGAGCGTT+TGG | + | chr3_3:82560190-82560209 | None:intergenic | 50.0% |
| GGGTTTGGAGGAGAAAGTCA+AGG | + | chr3_3:82560200-82560219 | None:intergenic | 50.0% | |
| TTTGGGGAATTGGGGTTTGG+AGG | + | chr3_3:82560212-82560231 | None:intergenic | 50.0% | |
| GATTGAGATCAGCTTCGGTG+GGG | + | chr3_3:82560399-82560418 | None:intergenic | 50.0% | |
| CGATTGAGATCAGCTTCGGT+GGG | + | chr3_3:82560400-82560419 | None:intergenic | 50.0% | |
| ACGATTGAGATCAGCTTCGG+TGG | + | chr3_3:82560401-82560420 | None:intergenic | 50.0% | |
| TGAGACTGATTGTGGGACAG+GGG | + | chr3_3:82560799-82560818 | None:intergenic | 50.0% | |
| GTGAGACTGATTGTGGGACA+GGG | + | chr3_3:82560800-82560819 | None:intergenic | 50.0% | |
| TGTGAGACTGATTGTGGGAC+AGG | + | chr3_3:82560801-82560820 | None:intergenic | 50.0% | |
| TTCTTCAACCCCAACGCCAA+CGG | - | chr3_3:82561078-82561097 | Msa0478090:intron | 50.0% | |
| TCTGATCTGTGTAGCCTCGT+TGG | + | chr3_3:82561258-82561277 | None:intergenic | 50.0% | |
| ACGAGGCTACACAGATCAGA+TGG | - | chr3_3:82561258-82561277 | Msa0478090:intron | 50.0% | |
| GTAACAGACTCACCCCTAGT+CGG | + | chr3_3:82561324-82561343 | None:intergenic | 50.0% | |
| !! | TGCAAGCACTGGAAGGATCA+AGG | + | chr3_3:82561353-82561372 | None:intergenic | 50.0% |
| TATATCAGGTGTCCCGTGAG+AGG | + | chr3_3:82561616-82561635 | None:intergenic | 50.0% | |
| AACCAAAATGGAGGAGGGGA+GGG | + | chr3_3:82561887-82561906 | None:intergenic | 50.0% | |
| TAACCAAAATGGAGGAGGGG+AGG | + | chr3_3:82561888-82561907 | None:intergenic | 50.0% | |
| GAGAGGTGATATACTGCAGC+TGG | - | chr3_3:82562174-82562193 | Msa0478090:CDS | 50.0% | |
| !! | CATGTATAGTGGGTGTCGAG+GGG | + | chr3_3:82562679-82562698 | None:intergenic | 50.0% |
| !! | GCATGTATAGTGGGTGTCGA+GGG | + | chr3_3:82562680-82562699 | None:intergenic | 50.0% |
| !! | AGCATGTATAGTGGGTGTCG+AGG | + | chr3_3:82562681-82562700 | None:intergenic | 50.0% |
| ! | TCTGAGATATCCAGGTCCTG+TGG | + | chr3_3:82563070-82563089 | None:intergenic | 50.0% |
| CAGGACCTGGATATCTCAGA+CGG | - | chr3_3:82563070-82563089 | Msa0478090:CDS | 50.0% | |
| TCTTAATGGTTGCCGAGTGG+CGG | - | chr3_3:82563132-82563151 | Msa0478090:CDS | 50.0% | |
| GGGCATAGCATTACAGGGTT+TGG | + | chr3_3:82563571-82563590 | None:intergenic | 50.0% | |
| GGATCCTCGCAGAAACCATA+GGG | - | chr3_3:82563624-82563643 | Msa0478090:intron | 50.0% | |
| GCTTGTCGAGACATTGTAGC+TGG | + | chr3_3:82563701-82563720 | None:intergenic | 50.0% | |
| ! | CAAGGTTAGCTGTCTTAGCC+GGG | + | chr3_3:82564001-82564020 | None:intergenic | 50.0% |
| GACGTGTCTGCATACTCATG+TGG | + | chr3_3:82564222-82564241 | None:intergenic | 50.0% | |
| AGAGGGAGTAAGAGGTCAAG+AGG | - | chr3_3:82564287-82564306 | Msa0478090:CDS | 50.0% | |
| GAGGGAGTAAGAGGTCAAGA+GGG | - | chr3_3:82564288-82564307 | Msa0478090:CDS | 50.0% | |
| TGTATACTGGAAGCCGGGAA+TGG | - | chr3_3:82564368-82564387 | Msa0478090:CDS | 50.0% | |
| CGAGTGCGTTTGTAACCATC+TGG | + | chr3_3:82564444-82564463 | None:intergenic | 50.0% | |
| ACAAACGCACTCGAATGCCT+AGG | - | chr3_3:82564451-82564470 | Msa0478090:intron | 50.0% | |
| GCCGCATGGTTTATATGCCT+AGG | + | chr3_3:82564471-82564490 | None:intergenic | 50.0% | |
| CTGGATCCAGCTCTTCTGAA+AGG | - | chr3_3:82564526-82564545 | Msa0478090:CDS | 50.0% | |
| GATGGACCTTTCAGAAGAGC+TGG | + | chr3_3:82564535-82564554 | None:intergenic | 50.0% | |
| ! | GTCCGCTTCTCTGGTTTATC+TGG | + | chr3_3:82564594-82564613 | None:intergenic | 50.0% |
| CTAACAGATGTCCGCTTCTC+TGG | + | chr3_3:82564603-82564622 | None:intergenic | 50.0% | |
| GAAACACACTCTAGCCTCTG+TGG | + | chr3_3:82564627-82564646 | None:intergenic | 50.0% | |
| !! | TCTGATGGACTCTCAGGAAG+TGG | - | chr3_3:82564768-82564787 | Msa0478090:intron | 50.0% |
| AAGAAGCCTGCTGAATCAGC+GGG | - | chr3_3:82564893-82564912 | Msa0478090:intron | 50.0% | |
| CCAAACAACTTCCGAAGGGA+AGG | + | chr3_3:82564923-82564942 | None:intergenic | 50.0% | |
| CCTTCCCTTCGGAAGTTGTT+TGG | - | chr3_3:82564920-82564939 | Msa0478090:intron | 50.0% | |
| ACAGCACCCTCTTCCCAATT+TGG | + | chr3_3:82565069-82565088 | None:intergenic | 50.0% | |
| CACCTCGCAATTGAGGTTCT+GGG | + | chr3_3:82565169-82565188 | None:intergenic | 50.0% | |
| TCACCTCGCAATTGAGGTTC+TGG | + | chr3_3:82565170-82565189 | None:intergenic | 50.0% | |
| ACCTGCGACCACATATTCAC+CGG | + | chr3_3:82565703-82565722 | None:intergenic | 50.0% | |
| !! | CTGTTGCTTTGCTGAGGTAC+TGG | - | chr3_3:82566086-82566105 | Msa0478090:CDS | 50.0% |
| !! | CTTTGCTGAGGTACTGGGAA+TGG | - | chr3_3:82566092-82566111 | Msa0478090:CDS | 50.0% |
| CATATTTGCGTACCCAGAGG+TGG | - | chr3_3:82566317-82566336 | Msa0478090:CDS | 50.0% | |
| GTTTGCTTGCGATGTGGATG+TGG | - | chr3_3:82566350-82566369 | Msa0478090:CDS | 50.0% | |
| GTGGTTTCCGACAGCCCTAA+CGG | - | chr3_3:82560289-82560308 | Msa0478090:three_prime_UTR | 55.0% | |
| GAGGTGTAGAGCCACCGTTA+GGG | + | chr3_3:82560306-82560325 | None:intergenic | 55.0% | |
| ! | TTGTTCTTGTTGTGGCGGCG+GGG | + | chr3_3:82560335-82560354 | None:intergenic | 55.0% |
| ! | CTTGTTCTTGTTGTGGCGGC+GGG | + | chr3_3:82560336-82560355 | None:intergenic | 55.0% |
| ! | GCTTGTTCTTGTTGTGGCGG+CGG | + | chr3_3:82560337-82560356 | None:intergenic | 55.0% |
| GTGGGGCCAGCAATTGAGAT+AGG | + | chr3_3:82560382-82560401 | None:intergenic | 55.0% | |
| GAGACTGATTGTGGGACAGG+GGG | + | chr3_3:82560798-82560817 | None:intergenic | 55.0% | |
| TGACACATTGTCGAACGGGG+TGG | - | chr3_3:82560988-82561007 | Msa0478090:intron | 55.0% | |
| GACACATTGTCGAACGGGGT+GGG | - | chr3_3:82560989-82561008 | Msa0478090:intron | 55.0% | |
| ACACATTGTCGAACGGGGTG+GGG | - | chr3_3:82560990-82561009 | Msa0478090:intron | 55.0% | |
| ATCTGTGTAGCCTCGTTGGC+GGG | + | chr3_3:82561254-82561273 | None:intergenic | 55.0% | |
| GATCTGTGTAGCCTCGTTGG+CGG | + | chr3_3:82561255-82561274 | None:intergenic | 55.0% | |
| ! | TTCCCTCCCCTCCTCCATTT+TGG | - | chr3_3:82561882-82561901 | Msa0478090:CDS | 55.0% |
| GGGACATGTGCATCAGGTAC+TGG | + | chr3_3:82562331-82562350 | None:intergenic | 55.0% | |
| ! | CGGAACCGTCTGAGATATCC+AGG | + | chr3_3:82563078-82563097 | None:intergenic | 55.0% |
| GGGATCCTCGCAGAAACCAT+AGG | - | chr3_3:82563623-82563642 | Msa0478090:intron | 55.0% | |
| CTGTCCCTATGGTTTCTGCG+AGG | + | chr3_3:82563631-82563650 | None:intergenic | 55.0% | |
| CTCGCAGAAACCATAGGGAC+AGG | - | chr3_3:82563629-82563648 | Msa0478090:intron | 55.0% | |
| GGAGAGGTTGGGTAGAATCC+CGG | - | chr3_3:82563980-82563999 | Msa0478090:intron | 55.0% | |
| TGCAGAATGCGCACAAGGCT+TGG | + | chr3_3:82564244-82564263 | None:intergenic | 55.0% | |
| ! | CACCCATTTTCTCAGCCGCA+TGG | + | chr3_3:82564485-82564504 | None:intergenic | 55.0% |
| GGACATCTGTTAGCCCACAG+AGG | - | chr3_3:82564610-82564629 | Msa0478090:intron | 55.0% | |
| !! | AGGTTCTGGGTGCTGGCAAT+TGG | + | chr3_3:82565156-82565175 | None:intergenic | 55.0% |
| !! | GCAATTGAGGTTCTGGGTGC+TGG | + | chr3_3:82565163-82565182 | None:intergenic | 55.0% |
| CACCCAGAACCTCAATTGCG+AGG | - | chr3_3:82565164-82565183 | Msa0478090:intron | 55.0% | |
| ACCGGTGAATATGTGGTCGC+AGG | - | chr3_3:82565699-82565718 | Msa0478090:intron | 55.0% | |
| !! | GAGGTACTGGGAATGGGCAA+AGG | - | chr3_3:82566099-82566118 | Msa0478090:CDS | 55.0% |
| GTTTCCGACAGCCCTAACGG+TGG | - | chr3_3:82560292-82560311 | Msa0478090:three_prime_UTR | 60.0% | |
| AGAGCCACCGTTAGGGCTGT+CGG | + | chr3_3:82560299-82560318 | None:intergenic | 60.0% | |
| ! | GGAGGTGTAGAGCCACCGTT+AGG | + | chr3_3:82560307-82560326 | None:intergenic | 60.0% |
| ! | TGTTCTTGTTGTGGCGGCGG+GGG | + | chr3_3:82560334-82560353 | None:intergenic | 60.0% |
| GGTTCTTCGCCGCCTTGATC+AGG | - | chr3_3:82560589-82560608 | Msa0478090:CDS | 60.0% | |
| CACATTGTCGAACGGGGTGG+GGG | - | chr3_3:82560991-82561010 | Msa0478090:intron | 60.0% | |
| ATCAGGTGTCCCGTGAGAGG+TGG | + | chr3_3:82561613-82561632 | None:intergenic | 60.0% | |
| GCAGGTTCATGGACCTGGAG+TGG | - | chr3_3:82562112-82562131 | Msa0478090:CDS | 60.0% | |
| GGGTCTATTCACAGTGGCGG+TGG | - | chr3_3:82563545-82563564 | Msa0478090:CDS | 60.0% | |
| !! | GGTTCTCCCGCTGATTCAGC+AGG | + | chr3_3:82564902-82564921 | None:intergenic | 60.0% |
| CAGCGGGAGAACCTTCCCTT+CGG | - | chr3_3:82564909-82564928 | Msa0478090:intron | 60.0% | |
| !! | CTGGGGCTGTTGCTTTGCTG+AGG | - | chr3_3:82566080-82566099 | Msa0478090:CDS | 60.0% |
| ATTGTCGAACGGGGTGGGGG+TGG | - | chr3_3:82560994-82561013 | Msa0478090:intron | 65.0% | |
| TTGTCGAACGGGGTGGGGGT+GGG | - | chr3_3:82560995-82561014 | Msa0478090:intron | 65.0% | |
| AAGCAGCTGACCCGCCAACG+AGG | - | chr3_3:82561241-82561260 | Msa0478090:intron | 65.0% | |
| TGTTGTGGCGGCGGGGGAAG+CGG | + | chr3_3:82560328-82560347 | None:intergenic | 70.0% | |
| ! | TGTGGCGGCGGGGGAAGCGG+AGG | + | chr3_3:82560325-82560344 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 82560096 | 82566565 | 82560096 | ID=Msa0478090;Name=Msa0478090 |
| chr3_3 | mRNA | 82560096 | 82566565 | 82560096 | ID=Msa0478090-mRNA-1;Parent=Msa0478090;Name=Msa0478090-mRNA-1;_AED=0.18;_eAED=0.18;_QI=190|0.8|1|1|1|1|11|465|720 |
| chr3_3 | exon | 82560096 | 82560635 | 82560096 | ID=Msa0478090-mRNA-1:exon:23035;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82561476 | 82561676 | 82561476 | ID=Msa0478090-mRNA-1:exon:23034;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82561771 | 82562484 | 82561771 | ID=Msa0478090-mRNA-1:exon:23033;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82562638 | 82562802 | 82562638 | ID=Msa0478090-mRNA-1:exon:23032;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82562890 | 82563219 | 82562890 | ID=Msa0478090-mRNA-1:exon:23031;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82563475 | 82563588 | 82563475 | ID=Msa0478090-mRNA-1:exon:23030;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82564235 | 82564396 | 82564235 | ID=Msa0478090-mRNA-1:exon:23029;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82564483 | 82564545 | 82564483 | ID=Msa0478090-mRNA-1:exon:23028;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82565331 | 82565438 | 82565331 | ID=Msa0478090-mRNA-1:exon:23027;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82566051 | 82566128 | 82566051 | ID=Msa0478090-mRNA-1:exon:23026;Parent=Msa0478090-mRNA-1 |
| chr3_3 | exon | 82566223 | 82566565 | 82566223 | ID=Msa0478090-mRNA-1:exon:23025;Parent=Msa0478090-mRNA-1 |
| chr3_3 | five_prime_UTR | 82566376 | 82566565 | 82566376 | ID=Msa0478090-mRNA-1:five_prime_utr;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82566223 | 82566375 | 82566223 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82566051 | 82566128 | 82566051 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82565331 | 82565438 | 82565331 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82564483 | 82564545 | 82564483 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82564235 | 82564396 | 82564235 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82563475 | 82563588 | 82563475 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82562890 | 82563219 | 82562890 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82562638 | 82562802 | 82562638 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82561771 | 82562484 | 82561771 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82561476 | 82561676 | 82561476 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | CDS | 82560561 | 82560635 | 82560561 | ID=Msa0478090-mRNA-1:cds;Parent=Msa0478090-mRNA-1 |
| chr3_3 | three_prime_UTR | 82560096 | 82560560 | 82560096 | ID=Msa0478090-mRNA-1:three_prime_utr;Parent=Msa0478090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
