Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384390 | XP_024633712.1 | 96.966 | 857 | 8 | 3 | 1 | 839 | 1 | 857 | 0.0 | 1710 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384390 | sp|Q29AK2|LMLN_DROPS | 28.037 | 535 | 260 | 18 | 182 | 593 | 105 | 637 | 5.65e-45 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384390 | A0A396J284 | 96.966 | 857 | 8 | 3 | 1 | 839 | 1 | 857 | 0.0 | 1710 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0384390 | Msa0478610 | 0.902789 | 6.768308e-79 | -8.615850e-47 |
| Msa0384390 | Msa1365700 | 0.833679 | 4.644119e-56 | -8.615850e-47 |
| Msa0384390 | Msa1453780 | 0.816661 | 4.929540e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384390 | MtrunA17_Chr3g0141351 | 96.966 | 857 | 8 | 3 | 1 | 839 | 1 | 857 | 0.0 | 1710 |
| Msa0384390 | MtrunA17_Chr1g0154601 | 77.972 | 858 | 157 | 10 | 1 | 839 | 16 | 860 | 0.0 | 1360 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384390 | AT5G42620.2 | 76.877 | 839 | 171 | 5 | 1 | 819 | 1 | 836 | 0.0 | 1342 |
| Msa0384390 | AT5G42620.1 | 76.877 | 839 | 171 | 5 | 1 | 819 | 1 | 836 | 0.0 | 1342 |
Find 298 sgRNAs with CRISPR-Local
Find 606 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAGAGAAAATTGAAATTT+AGG | 0.094408 | 3_1:+87456027 | Msa0384390:three_prime_UTR |
| CCTCCCACAACTTCTCTTTC+TGG | 0.154614 | 3_1:+87450179 | Msa0384390:CDS |
| CCCATTGAAGTTGGTCTTCA+TGG | 0.158821 | 3_1:-87449737 | None:intergenic |
| CTCCATCCTTGTCACACTTC+TGG | 0.169398 | 3_1:-87455640 | None:intergenic |
| CATATTGATATTGGCATCTT+TGG | 0.179276 | 3_1:+87449695 | Msa0384390:CDS |
| AGGAAGTTATTTAATATATT+TGG | 0.180961 | 3_1:+87455105 | Msa0384390:CDS |
| GAAATTCACCGGCGATTTAA+TGG | 0.193109 | 3_1:+87448815 | Msa0384390:five_prime_UTR |
| AGAAATAATAGTTCTTTAAA+AGG | 0.195739 | 3_1:+87455842 | Msa0384390:CDS |
| TAATTTAAGTCCTTAGATTT+AGG | 0.203342 | 3_1:+87455926 | Msa0384390:three_prime_UTR |
| TCCATTGAAATTACATGAAT+TGG | 0.207593 | 3_1:-87453781 | None:intergenic |
| CGCTGCTTTATTGGATTTCA+TGG | 0.213560 | 3_1:+87453825 | Msa0384390:CDS |
| GGGAATAATCGGTGGTAATT+TGG | 0.219708 | 3_1:-87455072 | None:intergenic |
| GGAAGATGCCGCTGCTTTAT+TGG | 0.223800 | 3_1:+87453816 | Msa0384390:CDS |
| GAGGGTCAGTGCACCGGGTT+TGG | 0.231594 | 3_1:+87455770 | Msa0384390:CDS |
| TTTCAGGTTATGCATGTTCT+TGG | 0.231729 | 3_1:+87451118 | Msa0384390:intron |
| AGGGTCAGTGCACCGGGTTT+GGG | 0.247283 | 3_1:+87455771 | Msa0384390:CDS |
| ATTGGATGAGATTGCAGATT+TGG | 0.248227 | 3_1:+87455983 | Msa0384390:three_prime_UTR |
| ATTCTGTTCCCTGGCTTTAA+TGG | 0.249214 | 3_1:+87453586 | Msa0384390:CDS |
| GTAGAGAAAATTGAAATTTA+GGG | 0.250808 | 3_1:+87456028 | Msa0384390:three_prime_UTR |
| TGATGCCGACTTGGTTCTTT+TGG | 0.270943 | 3_1:+87450772 | Msa0384390:CDS |
| TTCATGGGGCTTTGCATTGT+GGG | 0.285571 | 3_1:-87449721 | None:intergenic |
| CTGCTAAACGGCTTGCCTGC+TGG | 0.285813 | 3_1:+87455148 | Msa0384390:CDS |
| TGTGCAGATCATATTGATAT+TGG | 0.290859 | 3_1:+87449686 | Msa0384390:intron |
| TTTCTCATCCAAAATTGTTT+AGG | 0.300648 | 3_1:+87455956 | Msa0384390:three_prime_UTR |
| CATTGACCGGACACAGATAC+TGG | 0.304385 | 3_1:-87453756 | None:intergenic |
| TAAGAGATCAAGTATATATA+TGG | 0.305808 | 3_1:-87456197 | None:intergenic |
| CATGGTGGGGTTTGTGATAA+TGG | 0.308820 | 3_1:+87454877 | Msa0384390:CDS |
| TAATTTAGATATATCCTAAT+AGG | 0.313647 | 3_1:-87449966 | None:intergenic |
| GCCATTACCATTGCAATTGC+CGG | 0.319245 | 3_1:-87454002 | None:intergenic |
| ATAGGAGCATGGAGCTGTTC+TGG | 0.332445 | 3_1:-87454942 | None:intergenic |
| GCTTTCTCTGTTCAAGAATC+TGG | 0.340458 | 3_1:-87449812 | None:intergenic |
| ATCAGGTGCTCGTGCACTAT+TGG | 0.344459 | 3_1:-87452695 | None:intergenic |
| ACGGTCTGCCATGCTATAAT+TGG | 0.345396 | 3_1:-87452134 | None:intergenic |
| TTACCTCCCCTTGCAATCTC+TGG | 0.345906 | 3_1:+87452191 | Msa0384390:CDS |
| CTGCAGTATGCTAGGCTCGC+TGG | 0.352288 | 3_1:-87455025 | None:intergenic |
| ATGTATAAACAGTTCTTTAG+AGG | 0.353642 | 3_1:+87452933 | Msa0384390:CDS |
| TGCTAAACGGCTTGCCTGCT+GGG | 0.353696 | 3_1:+87455149 | Msa0384390:CDS |
| GTCAGACTGCTGACTGGTTT+AGG | 0.359031 | 3_1:+87450523 | Msa0384390:CDS |
| TTACCGTGAGGATTGCAAAA+AGG | 0.366073 | 3_1:-87450206 | None:intergenic |
| CCATTGAAGTTGGTCTTCAT+GGG | 0.369078 | 3_1:-87449736 | None:intergenic |
| CCAACTTCAATGGGGAGGTT+TGG | 0.373237 | 3_1:+87449746 | Msa0384390:CDS |
| AAAGCAACCTCCTAAATCTA+AGG | 0.373467 | 3_1:-87455936 | None:intergenic |
| AATAAAATATAGCTATAGAT+TGG | 0.373871 | 3_1:-87448448 | None:intergenic |
| ATCAGAGTACGCAACAAAAT+AGG | 0.374486 | 3_1:-87452656 | None:intergenic |
| AGCTATAGATTGGGTGTGTA+TGG | 0.376377 | 3_1:-87448438 | None:intergenic |
| ATGATGTGAAGGAACCTATT+AGG | 0.380281 | 3_1:+87449952 | Msa0384390:CDS |
| TGCAGTATGCTAGGCTCGCT+GGG | 0.380482 | 3_1:-87455024 | None:intergenic |
| GGGTCAGTGCACCGGGTTTG+GGG | 0.382645 | 3_1:+87455772 | Msa0384390:CDS |
| CTGAAGCCCCTTCAGAATAA+AGG | 0.390838 | 3_1:+87449888 | Msa0384390:CDS |
| CCCAATTCATGTAATTTCAA+TGG | 0.391322 | 3_1:+87453780 | Msa0384390:CDS |
| AAGGAATGTCTGTAAGATAT+AGG | 0.393336 | 3_1:+87455861 | Msa0384390:CDS |
| CATGGCAGACCGTCTTGATT+GGG | 0.394002 | 3_1:+87452144 | Msa0384390:CDS |
| AAATGACTTCAGGGTCTCAT+TGG | 0.396953 | 3_1:+87452005 | Msa0384390:intron |
| AGGTTGCTGTGGATGGTATC+TGG | 0.397438 | 3_1:+87453536 | Msa0384390:intron |
| TGGCGTGTGAACGGGATCAA+TGG | 0.400474 | 3_1:+87450837 | Msa0384390:CDS |
| TGCAACACAACACAATATTC+TGG | 0.400503 | 3_1:+87452229 | Msa0384390:CDS |
| GATGAGCAATGCAGCCTTCA+TGG | 0.402108 | 3_1:+87454859 | Msa0384390:CDS |
| GATGACTTACTGCAGGCATT+AGG | 0.402245 | 3_1:+87450501 | Msa0384390:intron |
| ACCCCACAGGTTTACGAGCC+TGG | 0.403004 | 3_1:+87449861 | Msa0384390:intron |
| GGGATCTGTGAATGTAAAAC+TGG | 0.407193 | 3_1:+87454040 | Msa0384390:CDS |
| GCAAGTGTATTTCCAGTTGT+AGG | 0.408439 | 3_1:-87450806 | None:intergenic |
| GGCGTGTGAACGGGATCAAT+GGG | 0.408923 | 3_1:+87450838 | Msa0384390:CDS |
| ATGATACGATTGTCAAGCTT+TGG | 0.409849 | 3_1:+87456117 | Msa0384390:three_prime_UTR |
| GGTGTTTGTGATCTGTGAAA+TGG | 0.414861 | 3_1:-87448521 | None:intergenic |
| CTTCATGGGGCTTTGCATTG+TGG | 0.417614 | 3_1:-87449722 | None:intergenic |
| CTCCAATTGTTGGCGATTGT+TGG | 0.418762 | 3_1:+87450231 | Msa0384390:CDS |
| AAAAGAACCAAGTCGGCATC+AGG | 0.420245 | 3_1:-87450770 | None:intergenic |
| GTAGGTCTCCACTATATGTT+AGG | 0.420425 | 3_1:-87452291 | None:intergenic |
| TACCAACAATCGCCAACAAT+TGG | 0.420987 | 3_1:-87450233 | None:intergenic |
| CAGGGTCTCATTGGGAGAAA+AGG | 0.421081 | 3_1:+87452014 | Msa0384390:intron |
| TCTACAAAAGGCTCTCCTCT+TGG | 0.425312 | 3_1:-87456010 | None:intergenic |
| CAACTGGAAATACACTTGCT+TGG | 0.427953 | 3_1:+87450810 | Msa0384390:CDS |
| ACTTCACCAAGCATTCTATC+AGG | 0.429722 | 3_1:-87452712 | None:intergenic |
| GCATGGCAGACCGTCTTGAT+TGG | 0.433495 | 3_1:+87452143 | Msa0384390:CDS |
| CCATTGAAATTACATGAATT+GGG | 0.433673 | 3_1:-87453780 | None:intergenic |
| GTAAAAGAAGAAATAGTTGT+TGG | 0.434277 | 3_1:-87448542 | None:intergenic |
| CCATGAAGACCAACTTCAAT+GGG | 0.434459 | 3_1:+87449737 | Msa0384390:CDS |
| CGAAGGCCTTGTAAGTTGTA+AGG | 0.434572 | 3_1:+87456141 | Msa0384390:three_prime_UTR |
| CCCATGAAGACCAACTTCAA+TGG | 0.434667 | 3_1:+87449736 | Msa0384390:CDS |
| CCAAACCTCCCCATTGAAGT+TGG | 0.435140 | 3_1:-87449746 | None:intergenic |
| TTCCTGCAGGTTGCTGTGGA+TGG | 0.435191 | 3_1:+87453529 | Msa0384390:intron |
| CCTCACTGCTAAAGAGGGTT+TGG | 0.438233 | 3_1:-87455739 | None:intergenic |
| CACATGCTATATTATAAGAT+TGG | 0.440894 | 3_1:-87455694 | None:intergenic |
| CCATTACCATTGCAATTGCC+GGG | 0.446029 | 3_1:-87454001 | None:intergenic |
| ACATGAATTGGGACATTGAC+CGG | 0.447405 | 3_1:-87453769 | None:intergenic |
| AACTGGAAATACACTTGCTT+GGG | 0.447737 | 3_1:+87450811 | Msa0384390:CDS |
| TTAGAGAAAGAGATTGAGAA+AGG | 0.448499 | 3_1:-87448613 | None:intergenic |
| TCTCCACTATATGTTAGGAT+TGG | 0.449181 | 3_1:-87452286 | None:intergenic |
| TAGCACCACCAGGGAATAAT+CGG | 0.449651 | 3_1:-87455083 | None:intergenic |
| CTCCACTATATGTTAGGATT+GGG | 0.451314 | 3_1:-87452285 | None:intergenic |
| TTGGGCAGTGGCGTGTGAAC+GGG | 0.454811 | 3_1:+87450829 | Msa0384390:CDS |
| TGCCCAATCCTAACATATAG+TGG | 0.458755 | 3_1:+87452283 | Msa0384390:CDS |
| TATATACCTTTATTAGCTTG+TGG | 0.459238 | 3_1:-87452334 | None:intergenic |
| ACTGGCTTAGAACTGGAAGA+TGG | 0.459917 | 3_1:+87451854 | Msa0384390:CDS |
| GTGTTTGTGATCTGTGAAAT+GGG | 0.461739 | 3_1:-87448520 | None:intergenic |
| TTACAGAGCTCTGGATATGC+AGG | 0.461769 | 3_1:-87453726 | None:intergenic |
| TGCAAGCAAATACCGCATAA+TGG | 0.462299 | 3_1:-87451709 | None:intergenic |
| GTAACTACAAGACCTACAAC+TGG | 0.464325 | 3_1:+87450794 | Msa0384390:CDS |
| GGATGGAGACAACAGACTTC+GGG | 0.466722 | 3_1:+87455655 | Msa0384390:CDS |
| CACGGTAACCCTCCAATTGT+TGG | 0.467549 | 3_1:+87450221 | Msa0384390:CDS |
| AAGGAAAAGACGGCGTGATC+AGG | 0.469846 | 3_1:+87451177 | Msa0384390:CDS |
| AACCGCAAGTTCCCCTTGAC+AGG | 0.475667 | 3_1:-87450564 | None:intergenic |
| GCTGTTCTGGCATGTGTATC+CGG | 0.476768 | 3_1:-87454929 | None:intergenic |
| ATAAAATATAGCTATAGATT+GGG | 0.478973 | 3_1:-87448447 | None:intergenic |
| GGGTCAGAGTTACAGAGCTC+TGG | 0.478999 | 3_1:-87453735 | None:intergenic |
| TCGCCGGTGAATTTCCGATC+AGG | 0.481406 | 3_1:-87448807 | None:intergenic |
| GGTGGAGCTATTCTGTTCCC+TGG | 0.483755 | 3_1:+87453577 | Msa0384390:CDS |
| CAATGGGGCCGTGCTATAGC+TGG | 0.485345 | 3_1:+87450854 | Msa0384390:CDS |
| AGATCTTGTATCCACGGAAC+CGG | 0.486965 | 3_1:-87452059 | None:intergenic |
| AAGAAGAAAGAAAGATAGAG+AGG | 0.489840 | 3_1:-87448473 | None:intergenic |
| CTTGGGCAGTGGCGTGTGAA+CGG | 0.493006 | 3_1:+87450828 | Msa0384390:CDS |
| CCTCTTTAGCAGTGAGGGCG+AGG | 0.494145 | 3_1:+87455745 | Msa0384390:CDS |
| AAGGGGAACTTGCGGTTAAG+TGG | 0.494260 | 3_1:+87450570 | Msa0384390:CDS |
| TATCATTAACCATTAAAGCC+AGG | 0.494474 | 3_1:-87453595 | None:intergenic |
| CTGGCTTAGAACTGGAAGAT+GGG | 0.495863 | 3_1:+87451855 | Msa0384390:CDS |
| CCCGGCAATTGCAATGGTAA+TGG | 0.496952 | 3_1:+87454001 | Msa0384390:CDS |
| AATGACTTCAGGGTCTCATT+GGG | 0.496959 | 3_1:+87452006 | Msa0384390:intron |
| CAAGTAATGGATGAAAAGCT+TGG | 0.497346 | 3_1:+87451635 | Msa0384390:CDS |
| TGTACGTGGTTCTATGACCC+AGG | 0.499143 | 3_1:+87452888 | Msa0384390:CDS |
| CCTCGCCCTCACTGCTAAAG+AGG | 0.500696 | 3_1:-87455745 | None:intergenic |
| TTAGGGAAATAGAAAGTAGA+GGG | 0.501244 | 3_1:+87456045 | Msa0384390:three_prime_UTR |
| TTGTCCTACCTTTATTCTGA+AGG | 0.501780 | 3_1:-87449896 | None:intergenic |
| AGTCCAAAATCGCTAAAAGA+AGG | 0.504088 | 3_1:-87455902 | None:intergenic |
| TTCAATGGAGATTGTGTCGA+TGG | 0.504603 | 3_1:+87453795 | Msa0384390:CDS |
| TCCAACTGCTGCAGTATGCT+AGG | 0.505831 | 3_1:-87455033 | None:intergenic |
| ACCGGCATCGACTGTTCCAC+TGG | 0.505943 | 3_1:+87454067 | Msa0384390:CDS |
| GCCTAGCATACTGCAGCAGT+TGG | 0.507515 | 3_1:+87455032 | Msa0384390:CDS |
| GTCCAAAATCGCTAAAAGAA+GGG | 0.509247 | 3_1:-87455901 | None:intergenic |
| TGCAAACTGAGAGACTAGAT+AGG | 0.511905 | 3_1:-87454960 | None:intergenic |
| TCTCTGCCTCAGCAGTCAAA+TGG | 0.511963 | 3_1:-87450986 | None:intergenic |
| TGTCCTACCTTTATTCTGAA+GGG | 0.513105 | 3_1:-87449895 | None:intergenic |
| ATGGCATGTGCCTTTCCAAT+GGG | 0.513864 | 3_1:+87454020 | Msa0384390:CDS |
| CTTACAACTTACAAGGCCTT+CGG | 0.515682 | 3_1:-87456140 | None:intergenic |
| TCTGTGGTTATGAATTGAAA+CGG | 0.518893 | 3_1:-87448713 | None:intergenic |
| CTTGCTGGACAGGCATACTC+TGG | 0.520010 | 3_1:+87451824 | Msa0384390:intron |
| TATCTAAATTATGATGCTGT+TGG | 0.521394 | 3_1:+87449978 | Msa0384390:CDS |
| AGGATGGAGACAACAGACTT+CGG | 0.523433 | 3_1:+87455654 | Msa0384390:CDS |
| ACCGAATAAACCTTGCGACC+AGG | 0.524470 | 3_1:-87449837 | None:intergenic |
| TGGAAAGTGTGTCCTCGTGC+TGG | 0.527251 | 3_1:+87453556 | Msa0384390:CDS |
| GATTATTCCCTGGTGGTGCT+AGG | 0.527545 | 3_1:+87455085 | Msa0384390:CDS |
| GCTGATAACAACCATTGCCC+TGG | 0.527913 | 3_1:-87452906 | None:intergenic |
| CATTAGGTCAGACTGCTGAC+TGG | 0.531529 | 3_1:+87450517 | Msa0384390:CDS |
| GACAATCTCTGTCAGGGGAG+TGG | 0.532484 | 3_1:-87450001 | None:intergenic |
| TGCACTTCTGAAGATATCTC+AGG | 0.532542 | 3_1:+87450260 | Msa0384390:CDS |
| AGATTGGGTGTGTATGGAGT+GGG | 0.532910 | 3_1:-87448432 | None:intergenic |
| CATTGAAGTTGGTCTTCATG+GGG | 0.533371 | 3_1:-87449735 | None:intergenic |
| TTTACATTCACAGATCCCAT+TGG | 0.534526 | 3_1:-87454035 | None:intergenic |
| TTCCGTTGTTCTGACTATGC+CGG | 0.536801 | 3_1:+87454910 | Msa0384390:CDS |
| GGATGAAAAGCTTGGACGGA+TGG | 0.541613 | 3_1:+87451643 | Msa0384390:CDS |
| TCTGACCCAGTATCTGTGTC+CGG | 0.541794 | 3_1:+87453750 | Msa0384390:CDS |
| GAAAAGACATCTTACCCAGC+AGG | 0.542174 | 3_1:-87455163 | None:intergenic |
| ACCAGTGGAACAGTCGATGC+CGG | 0.542571 | 3_1:-87454068 | None:intergenic |
| CTGATGAATGAGATTATGAC+CGG | 0.543925 | 3_1:+87452040 | Msa0384390:CDS |
| TACATATAACAGAGAGGCAG+AGG | 0.544261 | 3_1:+87452255 | Msa0384390:CDS |
| CAACAATCGCCAACAATTGG+AGG | 0.544985 | 3_1:-87450230 | None:intergenic |
| GGTGCAATAATCAGCTAATG+AGG | 0.545277 | 3_1:-87452635 | None:intergenic |
| CTCCCCTTGCAATCTCTGGA+AGG | 0.545311 | 3_1:+87452195 | Msa0384390:CDS |
| TTTAAGTCCTTAGATTTAGG+AGG | 0.546056 | 3_1:+87455929 | Msa0384390:three_prime_UTR |
| AGCAATGCAGCCTTCATGGT+GGG | 0.547148 | 3_1:+87454863 | Msa0384390:CDS |
| GATTGTCAAGCTTTGGCCGA+AGG | 0.547826 | 3_1:+87456124 | Msa0384390:three_prime_UTR |
| TCTTTAGCAGTGAGGGCGAG+GGG | 0.548218 | 3_1:+87455747 | Msa0384390:CDS |
| GTCCTACCTTTATTCTGAAG+GGG | 0.548431 | 3_1:-87449894 | None:intergenic |
| AATTACCACCGATTATTCCC+TGG | 0.549459 | 3_1:+87455075 | Msa0384390:CDS |
| GAAGGTTACAGAACAAGTAA+TGG | 0.552663 | 3_1:+87451622 | Msa0384390:intron |
| AATATTGTGCCCACTGAGGT+AGG | 0.552696 | 3_1:-87452309 | None:intergenic |
| TATAAGATTGGCATGCGGAA+TGG | 0.552911 | 3_1:-87455682 | None:intergenic |
| TCCCCTTGCAATCTCTGGAA+GGG | 0.553022 | 3_1:+87452196 | Msa0384390:CDS |
| TGAAGGGGCTTCAGTCGACC+AGG | 0.553245 | 3_1:-87449879 | None:intergenic |
| GCCTCATCATTAGTGCGCAC+AGG | 0.555711 | 3_1:+87452862 | Msa0384390:CDS |
| CAATCTTATAATATAGCATG+TGG | 0.556156 | 3_1:+87455695 | Msa0384390:CDS |
| AGGTGTCCCTGATGCCGACT+TGG | 0.556403 | 3_1:+87450763 | Msa0384390:CDS |
| TTGGGGAGATGAAATTGTCG+TGG | 0.556577 | 3_1:+87455789 | Msa0384390:CDS |
| ACTGCAGCAGTTGGAAGAAG+TGG | 0.556903 | 3_1:+87455041 | Msa0384390:CDS |
| GGTTCTATGACCCAGGGCAA+TGG | 0.557011 | 3_1:+87452895 | Msa0384390:CDS |
| TGGCTTAGAACTGGAAGATG+GGG | 0.557560 | 3_1:+87451856 | Msa0384390:CDS |
| ATCCAGAAGTGTGACAAGGA+TGG | 0.558279 | 3_1:+87455638 | Msa0384390:CDS |
| CTCTTTAGCAGTGAGGGCGA+GGG | 0.559269 | 3_1:+87455746 | Msa0384390:CDS |
| TATTCTGCATGTGGACAAGA+TGG | 0.561515 | 3_1:+87450594 | Msa0384390:CDS |
| ATTGGCTGTTGAGCCTGTCA+AGG | 0.562386 | 3_1:+87450551 | Msa0384390:CDS |
| CGAGCACCTGATAGAATGCT+TGG | 0.562397 | 3_1:+87452706 | Msa0384390:CDS |
| CTCGCCCTCACTGCTAAAGA+GGG | 0.563205 | 3_1:-87455744 | None:intergenic |
| AAATACACTTGCTTGGGCAG+TGG | 0.563695 | 3_1:+87450817 | Msa0384390:CDS |
| GGAACCAGAAAGAGAAGTTG+TGG | 0.563922 | 3_1:-87450183 | None:intergenic |
| TTGGGTGTGTATGGAGTGGG+TGG | 0.564987 | 3_1:-87448429 | None:intergenic |
| TCCTCGCCATTTGACTGCTG+AGG | 0.565327 | 3_1:+87450980 | Msa0384390:CDS |
| GCAATGCAGCCTTCATGGTG+GGG | 0.566422 | 3_1:+87454864 | Msa0384390:CDS |
| GCTCCCTTCCAGAGATTGCA+AGG | 0.566663 | 3_1:-87452199 | None:intergenic |
| TCGTGCGTTCTAAACCTGAT+CGG | 0.567876 | 3_1:+87448793 | Msa0384390:five_prime_UTR |
| TGACTGGTTTAGGAGAGCAT+TGG | 0.569656 | 3_1:+87450533 | Msa0384390:CDS |
| ATCTTATAATATAGCATGTG+GGG | 0.571472 | 3_1:+87455697 | Msa0384390:CDS |
| TTCAATGGGGAGGTTTGGAA+AGG | 0.571752 | 3_1:+87449751 | Msa0384390:CDS |
| TGGTTTAGTCGCCTGCGAAG+TGG | 0.572977 | 3_1:+87455809 | Msa0384390:CDS |
| AAAGTGTGTCCTCGTGCTGG+TGG | 0.573156 | 3_1:+87453559 | Msa0384390:CDS |
| ATCATTAACCATTAAAGCCA+GGG | 0.573751 | 3_1:-87453594 | None:intergenic |
| AATAACTTCCTAGCACCACC+AGG | 0.574093 | 3_1:-87455093 | None:intergenic |
| AGCGTGAATGCATGACAACA+CGG | 0.574223 | 3_1:-87451685 | None:intergenic |
| TTTAGGGAAATAGAAAGTAG+AGG | 0.577644 | 3_1:+87456044 | Msa0384390:three_prime_UTR |
| TGAGATTATGACCGGTTCCG+TGG | 0.577679 | 3_1:+87452048 | Msa0384390:CDS |
| TCTTGCCCCGGCAATTGCAA+TGG | 0.577775 | 3_1:+87453995 | Msa0384390:CDS |
| TTGGCTGTTGAGCCTGTCAA+GGG | 0.578072 | 3_1:+87450552 | Msa0384390:CDS |
| CTCTCTTAGAAGACAGTGGA+TGG | 0.580262 | 3_1:+87452104 | Msa0384390:CDS |
| AATCTTATAATATAGCATGT+GGG | 0.580462 | 3_1:+87455696 | Msa0384390:CDS |
| ACTGTGACGAGGCTGCTAAA+CGG | 0.581135 | 3_1:+87455136 | Msa0384390:CDS |
| ATAAATAAATAAATAAACAA+TGG | 0.581550 | 3_1:-87448678 | None:intergenic |
| AACTACAGATCTTGTATCCA+CGG | 0.582065 | 3_1:-87452065 | None:intergenic |
| CTACTTCTAGGTTCTTGCCC+CGG | 0.582074 | 3_1:+87453983 | Msa0384390:intron |
| CAATTTCATCTCCCCAAACC+CGG | 0.582561 | 3_1:-87455783 | None:intergenic |
| CTAAAATGAGCGAAGGCGTG+TGG | 0.582666 | 3_1:-87451148 | None:intergenic |
| AACAATCGCCAACAATTGGA+GGG | 0.582777 | 3_1:-87450229 | None:intergenic |
| AAGTCAGAGGAAGTAACTCT+AGG | 0.582858 | 3_1:+87452731 | Msa0384390:CDS |
| TCGCTAAAAGAAGGGGCGGA+AGG | 0.585334 | 3_1:-87455893 | None:intergenic |
| GAACCAGAAAGAGAAGTTGT+GGG | 0.588232 | 3_1:-87450182 | None:intergenic |
| CAAACCCTCTTTAGCAGTGA+GGG | 0.589072 | 3_1:+87455740 | Msa0384390:CDS |
| TCCAAAATCGCTAAAAGAAG+GGG | 0.591337 | 3_1:-87455900 | None:intergenic |
| GAGAAAGCGACCTGGTCGCA+AGG | 0.592980 | 3_1:+87449827 | Msa0384390:CDS |
| GAATGTAAAACTGGCTACAC+CGG | 0.594335 | 3_1:+87454049 | Msa0384390:CDS |
| AGTCAATTCCATTAAATCGC+CGG | 0.595396 | 3_1:-87448823 | None:intergenic |
| GACAGAGATTGTCGAAAAGT+CGG | 0.597866 | 3_1:+87450011 | Msa0384390:CDS |
| GGAGAAACAGTGACAGTGAA+CGG | 0.598174 | 3_1:-87448499 | None:intergenic |
| CTTTAGCAGTGAGGGCGAGG+GGG | 0.598398 | 3_1:+87455748 | Msa0384390:CDS |
| AATGGCATGTGCCTTTCCAA+TGG | 0.600828 | 3_1:+87454019 | Msa0384390:CDS |
| TTTAGCAGCCTCGTCACAGT+AGG | 0.603018 | 3_1:-87455133 | None:intergenic |
| TCCTGTGCGCACTAATGATG+AGG | 0.604382 | 3_1:-87452863 | None:intergenic |
| CTCCCTTCCAGAGATTGCAA+GGG | 0.604650 | 3_1:-87452198 | None:intergenic |
| TAAAATGAGCGAAGGCGTGT+GGG | 0.605040 | 3_1:-87451147 | None:intergenic |
| TAATGGATGAAAAGCTTGGA+CGG | 0.605604 | 3_1:+87451639 | Msa0384390:CDS |
| AAACCTGATCGGAAATTCAC+CGG | 0.607379 | 3_1:+87448804 | Msa0384390:five_prime_UTR |
| GCGTGAATGCATGACAACAC+GGG | 0.608226 | 3_1:-87451684 | None:intergenic |
| CTCAATCCAGAAGTGTGACA+AGG | 0.608986 | 3_1:+87455634 | Msa0384390:CDS |
| ATGGCAGACCGTCTTGATTG+GGG | 0.610083 | 3_1:+87452145 | Msa0384390:CDS |
| GCCTCAGCAGTCAAATGGCG+AGG | 0.610478 | 3_1:-87450981 | None:intergenic |
| AGAGTCTCAGAATGATGTGA+AGG | 0.610791 | 3_1:+87449941 | Msa0384390:CDS |
| ATTCACAGATCCCATTGGAA+AGG | 0.612632 | 3_1:-87454030 | None:intergenic |
| TATCACAAACCCCACCATGA+AGG | 0.614453 | 3_1:-87454873 | None:intergenic |
| ATTGACCGGACACAGATACT+GGG | 0.616861 | 3_1:-87453755 | None:intergenic |
| TGAGAGACTAGATAGGAGCA+TGG | 0.619676 | 3_1:-87454953 | None:intergenic |
| TAGATTGGGTGTGTATGGAG+TGG | 0.620765 | 3_1:-87448433 | None:intergenic |
| GTACAAAGCCAATTATAGCA+TGG | 0.623088 | 3_1:+87452126 | Msa0384390:CDS |
| GTACGTGGTTCTATGACCCA+GGG | 0.623333 | 3_1:+87452889 | Msa0384390:CDS |
| TTAGAGATGAAAGGAAAAGA+CGG | 0.624641 | 3_1:+87451167 | Msa0384390:CDS |
| CATTACCATTGCAATTGCCG+GGG | 0.627248 | 3_1:-87454000 | None:intergenic |
| CTGATAACAACCATTGCCCT+GGG | 0.627806 | 3_1:-87452905 | None:intergenic |
| TTTAATGGAATTGACTCCGT+CGG | 0.628619 | 3_1:+87448830 | Msa0384390:five_prime_UTR |
| CTTGAACAGAGAAAGCGACC+TGG | 0.629402 | 3_1:+87449819 | Msa0384390:CDS |
| TTCATCTCTAAAATGAGCGA+AGG | 0.632859 | 3_1:-87451155 | None:intergenic |
| TTAAGTGGATATTCTGCATG+TGG | 0.635362 | 3_1:+87450585 | Msa0384390:CDS |
| ATATTGAGAAGAAAACGAAA+CGG | 0.635505 | 3_1:-87448751 | None:intergenic |
| TAGTGGAGACCTACCTCAGT+GGG | 0.636935 | 3_1:+87452300 | Msa0384390:CDS |
| AGAATATACCAGCTATAGCA+CGG | 0.637096 | 3_1:-87450862 | None:intergenic |
| AACACTTCACCTTACGAAGG+CGG | 0.638184 | 3_1:-87450298 | None:intergenic |
| TTCTCAATATGTATGAGACA+CGG | 0.641607 | 3_1:+87448764 | Msa0384390:five_prime_UTR |
| TAGGGAAATAGAAAGTAGAG+GGG | 0.641634 | 3_1:+87456046 | Msa0384390:three_prime_UTR |
| TCTGCATGTGGACAAGATGG+AGG | 0.645384 | 3_1:+87450597 | Msa0384390:CDS |
| TCCCTTCCAGAGATTGCAAG+GGG | 0.647167 | 3_1:-87452197 | None:intergenic |
| ATATGGAGAAAAGAATGAAG+CGG | 0.647295 | 3_1:-87456180 | None:intergenic |
| GCTTCCTCGTGGATATATCG+AGG | 0.647865 | 3_1:+87450626 | Msa0384390:CDS |
| CTTCCTCGTGGATATATCGA+GGG | 0.647952 | 3_1:+87450627 | Msa0384390:CDS |
| AAAGAACCAAGTCGGCATCA+GGG | 0.648890 | 3_1:-87450769 | None:intergenic |
| AAAATCGCTAAAAGAAGGGG+CGG | 0.652294 | 3_1:-87455897 | None:intergenic |
| TACAGAGCTCTGGATATGCA+GGG | 0.653209 | 3_1:-87453725 | None:intergenic |
| AGCCTGTCAAGGGGAACTTG+CGG | 0.656310 | 3_1:+87450562 | Msa0384390:CDS |
| GGAGGCGTGCAGCTTCCTCG+TGG | 0.657724 | 3_1:+87450615 | Msa0384390:CDS |
| TGGACGGATGGTCAATCGAG+TGG | 0.658581 | 3_1:+87451655 | Msa0384390:CDS |
| CGTGAATGCATGACAACACG+GGG | 0.658852 | 3_1:-87451683 | None:intergenic |
| GATGAAAAGTAAAACACCGA+CGG | 0.659386 | 3_1:-87448846 | None:intergenic |
| TTCAGCTACTCTAATACACG+AGG | 0.660009 | 3_1:+87451016 | Msa0384390:CDS |
| CACCACCAGGGAATAATCGG+TGG | 0.661062 | 3_1:-87455080 | None:intergenic |
| GGTTGCGACCCCAATCAAGA+CGG | 0.662302 | 3_1:-87452153 | None:intergenic |
| GAAGACCAACTTCAATGGGG+AGG | 0.665879 | 3_1:+87449741 | Msa0384390:CDS |
| TTGGCTCTCTTAGAAGACAG+TGG | 0.669013 | 3_1:+87452100 | Msa0384390:CDS |
| GTGCGCACAGGATTTGTACG+TGG | 0.672722 | 3_1:+87452874 | Msa0384390:CDS |
| GGCTTAGAACTGGAAGATGG+GGG | 0.673964 | 3_1:+87451857 | Msa0384390:CDS |
| CATGAAATCCAATAAAGCAG+CGG | 0.673999 | 3_1:-87453824 | None:intergenic |
| ACATATAACAGAGAGGCAGA+GGG | 0.678098 | 3_1:+87452256 | Msa0384390:CDS |
| TGGCTGTTGAGCCTGTCAAG+GGG | 0.681151 | 3_1:+87450553 | Msa0384390:CDS |
| CTTCCAGAGATTGCAAGGGG+AGG | 0.682089 | 3_1:-87452194 | None:intergenic |
| TACCACCGATTATTCCCTGG+TGG | 0.689692 | 3_1:+87455078 | Msa0384390:CDS |
| AGAATGCTTGGTGAAGTCAG+AGG | 0.689914 | 3_1:+87452718 | Msa0384390:CDS |
| AGAATAGCTCCACCAGCACG+AGG | 0.692180 | 3_1:-87453568 | None:intergenic |
| CCAAACCCTCTTTAGCAGTG+AGG | 0.693575 | 3_1:+87455739 | Msa0384390:CDS |
| CCAGAAAGAGAAGTTGTGGG+AGG | 0.693692 | 3_1:-87450179 | None:intergenic |
| AGTTACCAAAAGAACCAAGT+CGG | 0.695935 | 3_1:-87450777 | None:intergenic |
| GAGCAATGCAGCCTTCATGG+TGG | 0.701413 | 3_1:+87454862 | Msa0384390:CDS |
| GCATTCACGCTACCATTATG+CGG | 0.702497 | 3_1:+87451697 | Msa0384390:CDS |
| TGGCAGCACCTACTGTGACG+AGG | 0.702750 | 3_1:+87455125 | Msa0384390:CDS |
| GAAAACACTTCACCTTACGA+AGG | 0.704760 | 3_1:-87450301 | None:intergenic |
| ATAACTTCCTAGCACCACCA+GGG | 0.709601 | 3_1:-87455092 | None:intergenic |
| ATAGTGGAGACCTACCTCAG+TGG | 0.713541 | 3_1:+87452299 | Msa0384390:CDS |
| ACAATTGGAGGGTTACCGTG+AGG | 0.716558 | 3_1:-87450218 | None:intergenic |
| AGCCCCTTCAGAATAAAGGT+AGG | 0.717982 | 3_1:+87449892 | Msa0384390:CDS |
| ATCCGGCATAGTCAGAACAA+CGG | 0.719846 | 3_1:-87454912 | None:intergenic |
| GTTTCAATTCATAACCACAG+AGG | 0.724569 | 3_1:+87448715 | Msa0384390:five_prime_UTR |
| TATATTATAAGATTGGCATG+CGG | 0.730538 | 3_1:-87455687 | None:intergenic |
| GCGTGTGAACGGGATCAATG+GGG | 0.738004 | 3_1:+87450839 | Msa0384390:CDS |
| TGGCTGTACATATAACAGAG+AGG | 0.739592 | 3_1:+87452249 | Msa0384390:CDS |
| CATGAAGACCAACTTCAATG+GGG | 0.747742 | 3_1:+87449738 | Msa0384390:CDS |
| GGAAAATATTGTGCCCACTG+AGG | 0.761834 | 3_1:-87452313 | None:intergenic |
| GTACCCTCGATATATCCACG+AGG | 0.838583 | 3_1:-87450630 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAATTAAAACAAATTAAA+AGG | - | chr3_1:87450328-87450347 | None:intergenic | 10.0% |
| !!! | TTAATTTGTTTTAATTTACT+AGG | + | chr3_1:87450329-87450348 | Msa0384390:intron | 10.0% |
| !! | AGAAATCATAAAAAAAATAA+AGG | + | chr3_1:87454725-87454744 | Msa0384390:intron | 10.0% |
| !! | ATAAAATATAGCTATAGATT+GGG | - | chr3_1:87448450-87448469 | None:intergenic | 15.0% |
| !! | AATAAAATATAGCTATAGAT+TGG | - | chr3_1:87448451-87448470 | None:intergenic | 15.0% |
| !!! | TTAATTTTACTCTCTTAATT+AGG | + | chr3_1:87448998-87449017 | Msa0384390:intron | 15.0% |
| !!! | TAATTTTACTCTCTTAATTA+GGG | + | chr3_1:87448999-87449018 | Msa0384390:intron | 15.0% |
| !!! | TGAAGTTTATTTTTTTTTTG+AGG | + | chr3_1:87449115-87449134 | Msa0384390:intron | 15.0% |
| !!! | GAAGTTTATTTTTTTTTTGA+GGG | + | chr3_1:87449116-87449135 | Msa0384390:intron | 15.0% |
| !!! | AAGTTTATTTTTTTTTTGAG+GGG | + | chr3_1:87449117-87449136 | Msa0384390:intron | 15.0% |
| !!! | AAATGGTAAATTTTGAAAAT+TGG | + | chr3_1:87449331-87449350 | Msa0384390:intron | 15.0% |
| !! | TAATTTAGATATATCCTAAT+AGG | - | chr3_1:87449969-87449988 | None:intergenic | 15.0% |
| !! | AGTGTTTAATATAAATGAAT+AGG | + | chr3_1:87450050-87450069 | Msa0384390:intron | 15.0% |
| !! | AGTAAAATTTCATATTGTAT+TGG | + | chr3_1:87451347-87451366 | Msa0384390:intron | 15.0% |
| !!! | GGATTATAAAATCTTTTATT+GGG | + | chr3_1:87451456-87451475 | Msa0384390:intron | 15.0% |
| !!! | GATTATAAAATCTTTTATTG+GGG | + | chr3_1:87451457-87451476 | Msa0384390:intron | 15.0% |
| !!! | ATTATAAAATCTTTTATTGG+GGG | + | chr3_1:87451458-87451477 | Msa0384390:intron | 15.0% |
| !! | ACAATTCTTAATATATGTAT+TGG | - | chr3_1:87451551-87451570 | None:intergenic | 15.0% |
| !! | ATAATATTATCATTACTTGT+TGG | + | chr3_1:87451595-87451614 | Msa0384390:intron | 15.0% |
| !! | ATATATAGCACTATAAATTA+GGG | - | chr3_1:87452997-87453016 | None:intergenic | 15.0% |
| !! | TATATATAGCACTATAAATT+AGG | - | chr3_1:87452998-87453017 | None:intergenic | 15.0% |
| !!! | TATATAATTAGATTTTCATC+TGG | + | chr3_1:87453012-87453031 | Msa0384390:intron | 15.0% |
| !!! | ATTTTTTTTATGATTTCTCA+GGG | - | chr3_1:87454723-87454742 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTATGATTTCTC+AGG | - | chr3_1:87454724-87454743 | None:intergenic | 15.0% |
| !!! | TGTTAAATAATTTTGTATGT+AGG | + | chr3_1:87454761-87454780 | Msa0384390:intron | 15.0% |
| !! | AGGAAGTTATTTAATATATT+TGG | + | chr3_1:87455105-87455124 | Msa0384390:CDS | 15.0% |
| !! | AGAAATAATAGTTCTTTAAA+AGG | + | chr3_1:87455842-87455861 | Msa0384390:CDS | 15.0% |
| !! | AATTGAGAAGAAAAAAAAAA+AGG | + | chr3_1:87456078-87456097 | Msa0384390:three_prime_UTR | 15.0% |
| !!! | TTTTACTTTTCATCTTTTCA+TGG | + | chr3_1:87448855-87448874 | Msa0384390:exon | 20.0% |
| !!! | GGGAATAATTGAATTTTATA+TGG | + | chr3_1:87449137-87449156 | Msa0384390:intron | 20.0% |
| !! | AATTTACCATTTACATTTGA+AGG | - | chr3_1:87449323-87449342 | None:intergenic | 20.0% |
| !! | AAAAATACTTGATACCTTAT+TGG | + | chr3_1:87449436-87449455 | Msa0384390:intron | 20.0% |
| !!! | AAAGTTAAGTGTTTTAATAG+TGG | + | chr3_1:87449502-87449521 | Msa0384390:intron | 20.0% |
| !!! | ATAATCATTCACATAGATTT+TGG | + | chr3_1:87450460-87450479 | Msa0384390:intron | 20.0% |
| !! | TTTGGTTATAAAAATGAGAT+TGG | + | chr3_1:87451051-87451070 | Msa0384390:intron | 20.0% |
| !!! | TTTTCTTATAAATTCCTGAA+TGG | + | chr3_1:87451230-87451249 | Msa0384390:intron | 20.0% |
| !! | ATGACGATAATAATAACTAT+TGG | + | chr3_1:87451277-87451296 | Msa0384390:intron | 20.0% |
| !!! | TGTCTTTAAAATGTATATCT+AGG | + | chr3_1:87451434-87451453 | Msa0384390:intron | 20.0% |
| !!! | GTCTTTAAAATGTATATCTA+GGG | + | chr3_1:87451435-87451454 | Msa0384390:intron | 20.0% |
| !!! | GGGATTATAAAATCTTTTAT+TGG | + | chr3_1:87451455-87451474 | Msa0384390:intron | 20.0% |
| !!! | TTATAAAATCTTTTATTGGG+GGG | + | chr3_1:87451459-87451478 | Msa0384390:intron | 20.0% |
| !!! | TTTTTTTTCTTGTCAAACTA+TGG | + | chr3_1:87451934-87451953 | Msa0384390:intron | 20.0% |
| !! | GAAAAATCAAGATATGTAAT+AGG | - | chr3_1:87452512-87452531 | None:intergenic | 20.0% |
| !! | TATATAGCACTATAAATTAG+GGG | - | chr3_1:87452996-87453015 | None:intergenic | 20.0% |
| !! | AAAAAAAATACTTTACTTCC+TGG | - | chr3_1:87453205-87453224 | None:intergenic | 20.0% |
| !!! | TTTTTCTTGTGATTTTGATA+AGG | + | chr3_1:87453268-87453287 | Msa0384390:intron | 20.0% |
| !! | ATAACATCAATGAAAGAATT+GGG | - | chr3_1:87453316-87453335 | None:intergenic | 20.0% |
| !! | AATAACATCAATGAAAGAAT+TGG | - | chr3_1:87453317-87453336 | None:intergenic | 20.0% |
| !! | TTCAATTCTCAATAATTTGA+TGG | + | chr3_1:87453657-87453676 | Msa0384390:intron | 20.0% |
| !!! | TAGAATCTAGTCTTAAAAAT+TGG | - | chr3_1:87454099-87454118 | None:intergenic | 20.0% |
| !! | CACAAAAGAAAAAGAAAAAA+AGG | - | chr3_1:87454178-87454197 | None:intergenic | 20.0% |
| !! | AAACTAGTCATAATTAAACA+AGG | - | chr3_1:87454274-87454293 | None:intergenic | 20.0% |
| !! | AATCTTATAATATAGCATGT+GGG | + | chr3_1:87455696-87455715 | Msa0384390:CDS | 20.0% |
| !! | TAATTTAAGTCCTTAGATTT+AGG | + | chr3_1:87455926-87455945 | Msa0384390:three_prime_UTR | 20.0% |
| !!! | CAATTTTTCCTAAACAATTT+TGG | - | chr3_1:87455967-87455986 | None:intergenic | 20.0% |
| !! | CAAAATTGTTTAGGAAAAAT+TGG | + | chr3_1:87455965-87455984 | Msa0384390:three_prime_UTR | 20.0% |
| !!! | ATTTCAATTTTCTCTACAAA+AGG | - | chr3_1:87456025-87456044 | None:intergenic | 20.0% |
| !! | TGTAGAGAAAATTGAAATTT+AGG | + | chr3_1:87456027-87456046 | Msa0384390:three_prime_UTR | 20.0% |
| !! | GTAGAGAAAATTGAAATTTA+GGG | + | chr3_1:87456028-87456047 | Msa0384390:three_prime_UTR | 20.0% |
| !! | TAAGAGATCAAGTATATATA+TGG | - | chr3_1:87456200-87456219 | None:intergenic | 20.0% |
| ! | GTAAAAGAAGAAATAGTTGT+TGG | - | chr3_1:87448545-87448564 | None:intergenic | 25.0% |
| ! | ATATTGAGAAGAAAACGAAA+CGG | - | chr3_1:87448754-87448773 | None:intergenic | 25.0% |
| !! | TTTTCATGGAGCTAATTATT+CGG | + | chr3_1:87448869-87448888 | Msa0384390:exon | 25.0% |
| !!! | ATTCATTCTACTTGTTTTTC+AGG | + | chr3_1:87448921-87448940 | Msa0384390:CDS | 25.0% |
| ! | TTCTAACTTATCACTGAATA+TGG | + | chr3_1:87449064-87449083 | Msa0384390:intron | 25.0% |
| ! | TTATATATTTGTCCTGAAAC+AGG | + | chr3_1:87449172-87449191 | Msa0384390:intron | 25.0% |
| !!! | AAACAGGATTTTTAAGGTTA+GGG | + | chr3_1:87449188-87449207 | Msa0384390:intron | 25.0% |
| !! | TGAAAATTGGCTTATAGATT+TGG | + | chr3_1:87449344-87449363 | Msa0384390:intron | 25.0% |
| ! | AGCTAGTATTAAGGTAAATT+TGG | + | chr3_1:87449393-87449412 | Msa0384390:intron | 25.0% |
| ! | AGTATTAAGGTAAATTTGGT+AGG | + | chr3_1:87449397-87449416 | Msa0384390:intron | 25.0% |
| !!! | CTGTTTTTGTTCCTTTTTTT+GGG | + | chr3_1:87449552-87449571 | Msa0384390:intron | 25.0% |
| !!! | TGTTTTTGTTCCTTTTTTTG+GGG | + | chr3_1:87449553-87449572 | Msa0384390:intron | 25.0% |
| ! | TATCTAAATTATGATGCTGT+TGG | + | chr3_1:87449978-87449997 | Msa0384390:CDS | 25.0% |
| !!! | ATATTTCTAGCCATAACATT+TGG | + | chr3_1:87450088-87450107 | Msa0384390:intron | 25.0% |
| !!! | TATTTCTAGCCATAACATTT+GGG | + | chr3_1:87450089-87450108 | Msa0384390:intron | 25.0% |
| !!! | TTTTATTTTTATGAGCAGCT+TGG | + | chr3_1:87450152-87450171 | Msa0384390:intron | 25.0% |
| !!! | TGTAGGTATTTTTATTTTGC+AGG | + | chr3_1:87450942-87450961 | Msa0384390:intron | 25.0% |
| !!! | ACGAGGTTTGTTATATTTTT+TGG | + | chr3_1:87451033-87451052 | Msa0384390:intron | 25.0% |
| ! | AGACAAACATTTAATTGTTC+TGG | + | chr3_1:87451380-87451399 | Msa0384390:intron | 25.0% |
| ! | GACAAACATTTAATTGTTCT+GGG | + | chr3_1:87451381-87451400 | Msa0384390:intron | 25.0% |
| ! | ACAAACATTTAATTGTTCTG+GGG | + | chr3_1:87451382-87451401 | Msa0384390:intron | 25.0% |
| ! | GAACTATACAGAAATTTCAT+AGG | + | chr3_1:87451494-87451513 | Msa0384390:intron | 25.0% |
| !! | GTTTACTGTTTTCATACTTA+AGG | + | chr3_1:87451764-87451783 | Msa0384390:intron | 25.0% |
| !!! | CATTTGTTGAATCTTTTGAA+GGG | - | chr3_1:87451792-87451811 | None:intergenic | 25.0% |
| !!! | TCATTTGTTGAATCTTTTGA+AGG | - | chr3_1:87451793-87451812 | None:intergenic | 25.0% |
| !! | TATTTTCCACAAGCTAATAA+AGG | + | chr3_1:87452328-87452347 | Msa0384390:CDS | 25.0% |
| !! | TATATACCTTTATTAGCTTG+TGG | - | chr3_1:87452337-87452356 | None:intergenic | 25.0% |
| ! | ATGTATAAACAGTTCTTTAG+AGG | + | chr3_1:87452933-87452952 | Msa0384390:CDS | 25.0% |
| ! | TAAACATCGTATTAATTCCA+CGG | - | chr3_1:87453142-87453161 | None:intergenic | 25.0% |
| !!! | GCTAGACTTTTTTTTTTTTG+AGG | + | chr3_1:87453337-87453356 | Msa0384390:intron | 25.0% |
| ! | GAAATACAAGCTTAAGAAAA+AGG | - | chr3_1:87453446-87453465 | None:intergenic | 25.0% |
| !!! | TTCACTCATTTTTGTGATAA+AGG | - | chr3_1:87453498-87453517 | None:intergenic | 25.0% |
| !!! | CTCTTCATTTTCGTTTTTAT+AGG | + | chr3_1:87453690-87453709 | Msa0384390:intron | 25.0% |
| ! | CCATTGAAATTACATGAATT+GGG | - | chr3_1:87453783-87453802 | None:intergenic | 25.0% |
| ! | TCCATTGAAATTACATGAAT+TGG | - | chr3_1:87453784-87453803 | None:intergenic | 25.0% |
| ! | ATACGTAAGTTATAGCATAA+AGG | - | chr3_1:87453886-87453905 | None:intergenic | 25.0% |
| !! | ATCTAAAGTAATAGGATATG+TGG | + | chr3_1:87454355-87454374 | Msa0384390:intron | 25.0% |
| !! | TCTAAAGTAATAGGATATGT+GGG | + | chr3_1:87454356-87454375 | Msa0384390:intron | 25.0% |
| ! | ATTGAGCTTAATTATCCTAA+AGG | - | chr3_1:87454455-87454474 | None:intergenic | 25.0% |
| ! | TTGTGAACAAACAAAATGAA+AGG | - | chr3_1:87454517-87454536 | None:intergenic | 25.0% |
| !!! | TTCATTTTGTTTGTTCACAA+TGG | + | chr3_1:87454517-87454536 | Msa0384390:intron | 25.0% |
| ! | TATATTATAAGATTGGCATG+CGG | - | chr3_1:87455690-87455709 | None:intergenic | 25.0% |
| ! | CACATGCTATATTATAAGAT+TGG | - | chr3_1:87455697-87455716 | None:intergenic | 25.0% |
| ! | CAATCTTATAATATAGCATG+TGG | + | chr3_1:87455695-87455714 | Msa0384390:CDS | 25.0% |
| ! | ATCTTATAATATAGCATGTG+GGG | + | chr3_1:87455697-87455716 | Msa0384390:CDS | 25.0% |
| ! | TTTCTCATCCAAAATTGTTT+AGG | + | chr3_1:87455956-87455975 | Msa0384390:three_prime_UTR | 25.0% |
| !! | TTTTAACCTTACAACTTACA+AGG | - | chr3_1:87456150-87456169 | None:intergenic | 25.0% |
| AAGAAGAAAGAAAGATAGAG+AGG | - | chr3_1:87448476-87448495 | None:intergenic | 30.0% | |
| TTAGAGAAAGAGATTGAGAA+AGG | - | chr3_1:87448616-87448635 | None:intergenic | 30.0% | |
| TCTGTGGTTATGAATTGAAA+CGG | - | chr3_1:87448716-87448735 | None:intergenic | 30.0% | |
| TTCTCAATATGTATGAGACA+CGG | + | chr3_1:87448764-87448783 | Msa0384390:five_prime_UTR | 30.0% | |
| AACCTTAAAAATCCTGTTTC+AGG | - | chr3_1:87449187-87449206 | None:intergenic | 30.0% | |
| !!! | GAAACAGGATTTTTAAGGTT+AGG | + | chr3_1:87449187-87449206 | Msa0384390:intron | 30.0% |
| TTTCTACCTGAAAACTTAAG+TGG | + | chr3_1:87449267-87449286 | Msa0384390:intron | 30.0% | |
| TTACCTTAATACTAGCTCAT+CGG | - | chr3_1:87449390-87449409 | None:intergenic | 30.0% | |
| TGATACCTTATTGGAAAGAT+AGG | + | chr3_1:87449445-87449464 | Msa0384390:intron | 30.0% | |
| CTATACCTATCTTTCCAATA+AGG | - | chr3_1:87449453-87449472 | None:intergenic | 30.0% | |
| CTTATTGGAAAGATAGGTAT+AGG | + | chr3_1:87449451-87449470 | Msa0384390:intron | 30.0% | |
| AAAAAGGAACAAAAACAGGA+AGG | - | chr3_1:87449550-87449569 | None:intergenic | 30.0% | |
| CCAAAAAAAGGAACAAAAAC+AGG | - | chr3_1:87449554-87449573 | None:intergenic | 30.0% | |
| !!! | CCTGTTTTTGTTCCTTTTTT+TGG | + | chr3_1:87449551-87449570 | Msa0384390:intron | 30.0% |
| !! | TAGAACATCGTTGTTTCTTA+AGG | + | chr3_1:87449578-87449597 | Msa0384390:intron | 30.0% |
| TGTGCAGATCATATTGATAT+TGG | + | chr3_1:87449686-87449705 | Msa0384390:intron | 30.0% | |
| CATATTGATATTGGCATCTT+TGG | + | chr3_1:87449695-87449714 | Msa0384390:CDS | 30.0% | |
| TGAGATATTCCCAAATGTTA+TGG | - | chr3_1:87450101-87450120 | None:intergenic | 30.0% | |
| AACAGCTTATTACATCTCTT+TGG | + | chr3_1:87450400-87450419 | Msa0384390:intron | 30.0% | |
| ACAGCTTATTACATCTCTTT+GGG | + | chr3_1:87450401-87450420 | Msa0384390:intron | 30.0% | |
| CTAGAAACATATGTTTGTAG+AGG | + | chr3_1:87450883-87450902 | Msa0384390:intron | 30.0% | |
| TATAAAAATGAGATTGGAGC+AGG | + | chr3_1:87451057-87451076 | Msa0384390:intron | 30.0% | |
| ATAAAAATGAGATTGGAGCA+GGG | + | chr3_1:87451058-87451077 | Msa0384390:intron | 30.0% | |
| TTAGAGATGAAAGGAAAAGA+CGG | + | chr3_1:87451167-87451186 | Msa0384390:CDS | 30.0% | |
| TGAGCAAAAATATTCCATTC+AGG | - | chr3_1:87451247-87451266 | None:intergenic | 30.0% | |
| TGCATGTCATATACTTTCAA+TGG | + | chr3_1:87451738-87451757 | Msa0384390:intron | 30.0% | |
| !!! | AAATTTTACTGGCTTAGAAC+TGG | + | chr3_1:87451847-87451866 | Msa0384390:CDS | 30.0% |
| ! | AGAGTTTTCTAAATGACTTC+AGG | + | chr3_1:87451995-87452014 | Msa0384390:intron | 30.0% |
| ! | GAGTTTTCTAAATGACTTCA+GGG | + | chr3_1:87451996-87452015 | Msa0384390:intron | 30.0% |
| TGTAGTTTCAAAAATGACGT+TGG | + | chr3_1:87452081-87452100 | Msa0384390:CDS | 30.0% | |
| GAGATAACATAACAGAGAAA+AGG | - | chr3_1:87452401-87452420 | None:intergenic | 30.0% | |
| AACAATGAGTAATGACAAGA+GGG | - | chr3_1:87452557-87452576 | None:intergenic | 30.0% | |
| !!! | TTGCCAACTGTTATTTCTTT+TGG | + | chr3_1:87452826-87452845 | Msa0384390:intron | 30.0% |
| CATCCAAAAGAAATAACAGT+TGG | - | chr3_1:87452832-87452851 | None:intergenic | 30.0% | |
| ! | TAAACAGTTCTTTAGAGGTA+TGG | + | chr3_1:87452938-87452957 | Msa0384390:intron | 30.0% |
| ATGTACATTCCATTAATTCC+AGG | + | chr3_1:87453184-87453203 | Msa0384390:intron | 30.0% | |
| ACTTTACTTCCTGGAATTAA+TGG | - | chr3_1:87453196-87453215 | None:intergenic | 30.0% | |
| ATCATTAACCATTAAAGCCA+GGG | - | chr3_1:87453597-87453616 | None:intergenic | 30.0% | |
| TATCATTAACCATTAAAGCC+AGG | - | chr3_1:87453598-87453617 | None:intergenic | 30.0% | |
| CCCAATTCATGTAATTTCAA+TGG | + | chr3_1:87453780-87453799 | Msa0384390:CDS | 30.0% | |
| GTAAGTTATAGCATAAAGGT+GGG | - | chr3_1:87453882-87453901 | None:intergenic | 30.0% | |
| AAGAACCTAGAAGTAGTTAA+GGG | - | chr3_1:87453979-87453998 | None:intergenic | 30.0% | |
| GTCATAATTAAACAAGGCAA+GGG | - | chr3_1:87454268-87454287 | None:intergenic | 30.0% | |
| AGTCATAATTAAACAAGGCA+AGG | - | chr3_1:87454269-87454288 | None:intergenic | 30.0% | |
| ! | TGCAATTCCTTGTTATAATC+AGG | - | chr3_1:87454336-87454355 | None:intergenic | 30.0% |
| ! | GGAATTGCATCTAAAGTAAT+AGG | + | chr3_1:87454347-87454366 | Msa0384390:intron | 30.0% |
| CTAAAGTAATAGGATATGTG+GGG | + | chr3_1:87454357-87454376 | Msa0384390:intron | 30.0% | |
| !! | TTTCAGGTTAAAGCATGAAT+AGG | - | chr3_1:87455236-87455255 | None:intergenic | 30.0% |
| ! | TTCCTATTTTCATTCCTACT+TGG | + | chr3_1:87455290-87455309 | Msa0384390:intron | 30.0% |
| TTGTAATGTATAGACCAAGT+AGG | - | chr3_1:87455307-87455326 | None:intergenic | 30.0% | |
| GAATATCTAACCGACAAAAT+GGG | - | chr3_1:87455375-87455394 | None:intergenic | 30.0% | |
| TGAATATCTAACCGACAAAA+TGG | - | chr3_1:87455376-87455395 | None:intergenic | 30.0% | |
| AAAGCAGTAGGATTATTTCA+TGG | - | chr3_1:87455418-87455437 | None:intergenic | 30.0% | |
| AAAATCAGTCTCATGTTCTT+TGG | - | chr3_1:87455511-87455530 | None:intergenic | 30.0% | |
| TTTAGATATTAGAGCACAGT+TGG | + | chr3_1:87455565-87455584 | Msa0384390:intron | 30.0% | |
| AAGGAATGTCTGTAAGATAT+AGG | + | chr3_1:87455861-87455880 | Msa0384390:CDS | 30.0% | |
| TTTAAGTCCTTAGATTTAGG+AGG | + | chr3_1:87455929-87455948 | Msa0384390:three_prime_UTR | 30.0% | |
| TTTAGGGAAATAGAAAGTAG+AGG | + | chr3_1:87456044-87456063 | Msa0384390:three_prime_UTR | 30.0% | |
| TTAGGGAAATAGAAAGTAGA+GGG | + | chr3_1:87456045-87456064 | Msa0384390:three_prime_UTR | 30.0% | |
| ATATGGAGAAAAGAATGAAG+CGG | - | chr3_1:87456183-87456202 | None:intergenic | 30.0% | |
| GTGTTTGTGATCTGTGAAAT+GGG | - | chr3_1:87448523-87448542 | None:intergenic | 35.0% | |
| GTTTCAATTCATAACCACAG+AGG | + | chr3_1:87448715-87448734 | Msa0384390:five_prime_UTR | 35.0% | |
| GAAAAAGAAGAAATCCTCTG+TGG | - | chr3_1:87448732-87448751 | None:intergenic | 35.0% | |
| AGTCAATTCCATTAAATCGC+CGG | - | chr3_1:87448826-87448845 | None:intergenic | 35.0% | |
| ! | TTTAATGGAATTGACTCCGT+CGG | + | chr3_1:87448830-87448849 | Msa0384390:five_prime_UTR | 35.0% |
| GATGAAAAGTAAAACACCGA+CGG | - | chr3_1:87448849-87448868 | None:intergenic | 35.0% | |
| ! | GTCCTGAAACAGGATTTTTA+AGG | + | chr3_1:87449182-87449201 | Msa0384390:intron | 35.0% |
| ! | CAGTTTCCACTTAAGTTTTC+AGG | - | chr3_1:87449276-87449295 | None:intergenic | 35.0% |
| ! | AACTGTTCAACTAGCTTCTT+TGG | + | chr3_1:87449291-87449310 | Msa0384390:intron | 35.0% |
| CGGTTACCTTCAAATGTAAA+TGG | + | chr3_1:87449314-87449333 | Msa0384390:intron | 35.0% | |
| !! | ATAGATTTGGCTCTAGATAG+TGG | + | chr3_1:87449357-87449376 | Msa0384390:intron | 35.0% |
| ATGTTCTACACCCCAAAAAA+AGG | - | chr3_1:87449566-87449585 | None:intergenic | 35.0% | |
| ACACTATCGTTACTCAAGTT+GGG | + | chr3_1:87449637-87449656 | Msa0384390:intron | 35.0% | |
| TGTCCTACCTTTATTCTGAA+GGG | - | chr3_1:87449898-87449917 | None:intergenic | 35.0% | |
| TTGTCCTACCTTTATTCTGA+AGG | - | chr3_1:87449899-87449918 | None:intergenic | 35.0% | |
| ATGATGTGAAGGAACCTATT+AGG | + | chr3_1:87449952-87449971 | Msa0384390:CDS | 35.0% | |
| ! | TAAACTTGATGACTTACTGC+AGG | + | chr3_1:87450494-87450513 | Msa0384390:intron | 35.0% |
| TTAAGTGGATATTCTGCATG+TGG | + | chr3_1:87450585-87450604 | Msa0384390:CDS | 35.0% | |
| AGTTACCAAAAGAACCAAGT+CGG | - | chr3_1:87450780-87450799 | None:intergenic | 35.0% | |
| AACTGGAAATACACTTGCTT+GGG | + | chr3_1:87450811-87450830 | Msa0384390:CDS | 35.0% | |
| AGAATATACCAGCTATAGCA+CGG | - | chr3_1:87450865-87450884 | None:intergenic | 35.0% | |
| ATCGCTTTCATTTCGCATTT+GGG | + | chr3_1:87450908-87450927 | Msa0384390:intron | 35.0% | |
| TAAAAATGAGATTGGAGCAG+GGG | + | chr3_1:87451059-87451078 | Msa0384390:intron | 35.0% | |
| ! | CTTCATGTTTGACCTTTTTC+AGG | + | chr3_1:87451102-87451121 | Msa0384390:intron | 35.0% |
| GAACATGCATAACCTGAAAA+AGG | - | chr3_1:87451117-87451136 | None:intergenic | 35.0% | |
| !! | TTTCAGGTTATGCATGTTCT+TGG | + | chr3_1:87451118-87451137 | Msa0384390:intron | 35.0% |
| !! | TTCATCTCTAAAATGAGCGA+AGG | - | chr3_1:87451158-87451177 | None:intergenic | 35.0% |
| !! | TCGCTCATTTTAGAGATGAA+AGG | + | chr3_1:87451158-87451177 | Msa0384390:CDS | 35.0% |
| CACTTCATTTCTCAGTTCTA+AGG | - | chr3_1:87451309-87451328 | None:intergenic | 35.0% | |
| !! | CATTTAATTGTTCTGGGGAA+TGG | + | chr3_1:87451387-87451406 | Msa0384390:intron | 35.0% |
| ! | TCATTACTTGTTGGAACTGA+AGG | + | chr3_1:87451604-87451623 | Msa0384390:intron | 35.0% |
| GAAGGTTACAGAACAAGTAA+TGG | + | chr3_1:87451622-87451641 | Msa0384390:intron | 35.0% | |
| !! | CAAGTAATGGATGAAAAGCT+TGG | + | chr3_1:87451635-87451654 | Msa0384390:CDS | 35.0% |
| ! | TAATGGATGAAAAGCTTGGA+CGG | + | chr3_1:87451639-87451658 | Msa0384390:CDS | 35.0% |
| ! | ATGACTATTTAGTGACTTGC+TGG | + | chr3_1:87451809-87451828 | Msa0384390:intron | 35.0% |
| !! | GCATACTCTGGAAATTTTAC+TGG | + | chr3_1:87451836-87451855 | Msa0384390:CDS | 35.0% |
| TACCAAAGCAACACTCAATA+TGG | + | chr3_1:87451966-87451985 | Msa0384390:intron | 35.0% | |
| !! | AACCATATTGAGTGTTGCTT+TGG | - | chr3_1:87451971-87451990 | None:intergenic | 35.0% |
| CTGATGAATGAGATTATGAC+CGG | + | chr3_1:87452040-87452059 | Msa0384390:CDS | 35.0% | |
| AACTACAGATCTTGTATCCA+CGG | - | chr3_1:87452068-87452087 | None:intergenic | 35.0% | |
| GTACAAAGCCAATTATAGCA+TGG | + | chr3_1:87452126-87452145 | Msa0384390:CDS | 35.0% | |
| AGGTAACAAATTCAGTACCT+TGG | - | chr3_1:87452177-87452196 | None:intergenic | 35.0% | |
| TGCAACACAACACAATATTC+TGG | + | chr3_1:87452229-87452248 | Msa0384390:CDS | 35.0% | |
| CTCCACTATATGTTAGGATT+GGG | - | chr3_1:87452288-87452307 | None:intergenic | 35.0% | |
| TCTCCACTATATGTTAGGAT+TGG | - | chr3_1:87452289-87452308 | None:intergenic | 35.0% | |
| GAACAATGAGTAATGACAAG+AGG | - | chr3_1:87452558-87452577 | None:intergenic | 35.0% | |
| ! | GTTCACACGAAATTGTGTTT+TGG | + | chr3_1:87452574-87452593 | Msa0384390:intron | 35.0% |
| ATCAGAGTACGCAACAAAAT+AGG | - | chr3_1:87452659-87452678 | None:intergenic | 35.0% | |
| ! | TATTTTGTTGCGTACTCTGA+TGG | + | chr3_1:87452658-87452677 | Msa0384390:CDS | 35.0% |
| AAAGCAAATGTAAAGCAGTC+TGG | - | chr3_1:87452783-87452802 | None:intergenic | 35.0% | |
| ! | TTGCTTTATTGACAACATGC+AGG | + | chr3_1:87452796-87452815 | Msa0384390:intron | 35.0% |
| !!! | CTGTTATTTCTTTTGGATGC+AGG | + | chr3_1:87452833-87452852 | Msa0384390:intron | 35.0% |
| ! | AGTTCTTTAGAGGTATGGTT+TGG | + | chr3_1:87452943-87452962 | Msa0384390:intron | 35.0% |
| TTTAGCAACCATGTTTGAGT+AGG | + | chr3_1:87453378-87453397 | Msa0384390:intron | 35.0% | |
| ! | GGAATTTTCCTACTCAAACA+TGG | - | chr3_1:87453389-87453408 | None:intergenic | 35.0% |
| GATAAAGGAAAAAGAAGCGA+AGG | - | chr3_1:87453483-87453502 | None:intergenic | 35.0% | |
| CATGAAATCCAATAAAGCAG+CGG | - | chr3_1:87453827-87453846 | None:intergenic | 35.0% | |
| CGTAAGTTATAGCATAAAGG+TGG | - | chr3_1:87453883-87453902 | None:intergenic | 35.0% | |
| !!! | AGGGAAGGCATTTTTAGAAA+AGG | - | chr3_1:87453960-87453979 | None:intergenic | 35.0% |
| CAAGAACCTAGAAGTAGTTA+AGG | - | chr3_1:87453980-87453999 | None:intergenic | 35.0% | |
| TTTACATTCACAGATCCCAT+TGG | - | chr3_1:87454038-87454057 | None:intergenic | 35.0% | |
| TATAAGACGTCCTCATTTCT+GGG | + | chr3_1:87454146-87454165 | Msa0384390:intron | 35.0% | |
| CTTGTTTCGTTCTATCTTGT+GGG | + | chr3_1:87454198-87454217 | Msa0384390:intron | 35.0% | |
| ! | TTGATAATACGTTTGAGTGC+TGG | + | chr3_1:87454425-87454444 | Msa0384390:intron | 35.0% |
| TGATAATACGTTTGAGTGCT+GGG | + | chr3_1:87454426-87454445 | Msa0384390:intron | 35.0% | |
| CAATCACTTTCATGTGATTG+AGG | + | chr3_1:87454471-87454490 | Msa0384390:intron | 35.0% | |
| !! | TGGTGGTTGACTTTTCTTTT+GGG | - | chr3_1:87454580-87454599 | None:intergenic | 35.0% |
| !! | TTGGTGGTTGACTTTTCTTT+TGG | - | chr3_1:87454581-87454600 | None:intergenic | 35.0% |
| AAAGAAAAGTCAACCACCAA+TGG | + | chr3_1:87454581-87454600 | Msa0384390:intron | 35.0% | |
| AAGAAAAGTCAACCACCAAT+GGG | + | chr3_1:87454582-87454601 | Msa0384390:intron | 35.0% | |
| AAACTACAAGTGGTGTCTTT+AGG | - | chr3_1:87454624-87454643 | None:intergenic | 35.0% | |
| ! | AAAGACACCACTTGTAGTTT+TGG | + | chr3_1:87454624-87454643 | Msa0384390:intron | 35.0% |
| ! | AAGACACCACTTGTAGTTTT+GGG | + | chr3_1:87454625-87454644 | Msa0384390:intron | 35.0% |
| GTTCTTGCAGAAACATGAAT+TGG | + | chr3_1:87454799-87454818 | Msa0384390:intron | 35.0% | |
| CTCAGTTTGCAAAAATGTAC+TGG | + | chr3_1:87454972-87454991 | Msa0384390:CDS | 35.0% | |
| ! | GTACTGGTAAATGATGTATC+TGG | + | chr3_1:87454988-87455007 | Msa0384390:intron | 35.0% |
| TGATCGCAAAACAGAATTTC+AGG | - | chr3_1:87455252-87455271 | None:intergenic | 35.0% | |
| GACCAAGTAGGAATGAAAAT+AGG | - | chr3_1:87455295-87455314 | None:intergenic | 35.0% | |
| ! | TGTCGGTTAGATATTCAATG+AGG | + | chr3_1:87455379-87455398 | Msa0384390:intron | 35.0% |
| ! | AACTTGACTTGAAAAGCAGT+AGG | - | chr3_1:87455430-87455449 | None:intergenic | 35.0% |
| TCCAAAATCGCTAAAAGAAG+GGG | - | chr3_1:87455903-87455922 | None:intergenic | 35.0% | |
| GTCCAAAATCGCTAAAAGAA+GGG | - | chr3_1:87455904-87455923 | None:intergenic | 35.0% | |
| AGTCCAAAATCGCTAAAAGA+AGG | - | chr3_1:87455905-87455924 | None:intergenic | 35.0% | |
| AAAGCAACCTCCTAAATCTA+AGG | - | chr3_1:87455939-87455958 | None:intergenic | 35.0% | |
| ATTGGATGAGATTGCAGATT+TGG | + | chr3_1:87455983-87456002 | Msa0384390:three_prime_UTR | 35.0% | |
| TAGGGAAATAGAAAGTAGAG+GGG | + | chr3_1:87456046-87456065 | Msa0384390:three_prime_UTR | 35.0% | |
| ATGATACGATTGTCAAGCTT+TGG | + | chr3_1:87456117-87456136 | Msa0384390:three_prime_UTR | 35.0% | |
| AGCTATAGATTGGGTGTGTA+TGG | - | chr3_1:87448441-87448460 | None:intergenic | 40.0% | |
| GGTGTTTGTGATCTGTGAAA+TGG | - | chr3_1:87448524-87448543 | None:intergenic | 40.0% | |
| AAACCTGATCGGAAATTCAC+CGG | + | chr3_1:87448804-87448823 | Msa0384390:five_prime_UTR | 40.0% | |
| GAAATTCACCGGCGATTTAA+TGG | + | chr3_1:87448815-87448834 | Msa0384390:five_prime_UTR | 40.0% | |
| CTAAACACGCAGAAAACTGA+TGG | - | chr3_1:87448963-87448982 | None:intergenic | 40.0% | |
| TGGTAAGAAGCTTATGAAGC+TGG | + | chr3_1:87449084-87449103 | Msa0384390:intron | 40.0% | |
| ! | TGTTCAACTAGCTTCTTTGG+CGG | + | chr3_1:87449294-87449313 | Msa0384390:intron | 40.0% |
| ACTCCGATGAGCTAGTATTA+AGG | + | chr3_1:87449384-87449403 | Msa0384390:intron | 40.0% | |
| AAGGTAAATTTGGTAGGACC+CGG | + | chr3_1:87449403-87449422 | Msa0384390:intron | 40.0% | |
| ! | AGTATTTTTCCCCCCTTTTC+CGG | - | chr3_1:87449425-87449444 | None:intergenic | 40.0% |
| GACACTATCGTTACTCAAGT+TGG | + | chr3_1:87449636-87449655 | Msa0384390:intron | 40.0% | |
| !! | CATTGAAGTTGGTCTTCATG+GGG | - | chr3_1:87449738-87449757 | None:intergenic | 40.0% |
| !! | CCATTGAAGTTGGTCTTCAT+GGG | - | chr3_1:87449739-87449758 | None:intergenic | 40.0% |
| CCATGAAGACCAACTTCAAT+GGG | + | chr3_1:87449737-87449756 | Msa0384390:CDS | 40.0% | |
| CATGAAGACCAACTTCAATG+GGG | + | chr3_1:87449738-87449757 | Msa0384390:CDS | 40.0% | |
| GCTTTCTCTGTTCAAGAATC+TGG | - | chr3_1:87449815-87449834 | None:intergenic | 40.0% | |
| ! | GTCCTACCTTTATTCTGAAG+GGG | - | chr3_1:87449897-87449916 | None:intergenic | 40.0% |
| AGAGTCTCAGAATGATGTGA+AGG | + | chr3_1:87449941-87449960 | Msa0384390:CDS | 40.0% | |
| ! | TTTTCGACAATCTCTGTCAG+GGG | - | chr3_1:87450009-87450028 | None:intergenic | 40.0% |
| ! | CTTTTCGACAATCTCTGTCA+GGG | - | chr3_1:87450010-87450029 | None:intergenic | 40.0% |
| ! | ACTTTTCGACAATCTCTGTC+AGG | - | chr3_1:87450011-87450030 | None:intergenic | 40.0% |
| GACAGAGATTGTCGAAAAGT+CGG | + | chr3_1:87450011-87450030 | Msa0384390:CDS | 40.0% | |
| GAACCAGAAAGAGAAGTTGT+GGG | - | chr3_1:87450185-87450204 | None:intergenic | 40.0% | |
| TACCGTGAGGATTGCAAAAA+GGG | - | chr3_1:87450208-87450227 | None:intergenic | 40.0% | |
| TTACCGTGAGGATTGCAAAA+AGG | - | chr3_1:87450209-87450228 | None:intergenic | 40.0% | |
| AACAATCGCCAACAATTGGA+GGG | - | chr3_1:87450232-87450251 | None:intergenic | 40.0% | |
| TACCAACAATCGCCAACAAT+TGG | - | chr3_1:87450236-87450255 | None:intergenic | 40.0% | |
| ! | TGCACTTCTGAAGATATCTC+AGG | + | chr3_1:87450260-87450279 | Msa0384390:CDS | 40.0% |
| GAAAACACTTCACCTTACGA+AGG | - | chr3_1:87450304-87450323 | None:intergenic | 40.0% | |
| ! | TTTTCCCGTGGGAGAATTAT+TGG | + | chr3_1:87450361-87450380 | Msa0384390:intron | 40.0% |
| TTTCCCGTGGGAGAATTATT+GGG | + | chr3_1:87450362-87450381 | Msa0384390:intron | 40.0% | |
| TATTACATCTCTTTGGGCAG+TGG | + | chr3_1:87450407-87450426 | Msa0384390:intron | 40.0% | |
| ATTACATCTCTTTGGGCAGT+GGG | + | chr3_1:87450408-87450427 | Msa0384390:intron | 40.0% | |
| TATTCTGCATGTGGACAAGA+TGG | + | chr3_1:87450594-87450613 | Msa0384390:CDS | 40.0% | |
| GTAACTACAAGACCTACAAC+TGG | + | chr3_1:87450794-87450813 | Msa0384390:CDS | 40.0% | |
| GCAAGTGTATTTCCAGTTGT+AGG | - | chr3_1:87450809-87450828 | None:intergenic | 40.0% | |
| CAACTGGAAATACACTTGCT+TGG | + | chr3_1:87450810-87450829 | Msa0384390:CDS | 40.0% | |
| GATCGCTTTCATTTCGCATT+TGG | + | chr3_1:87450907-87450926 | Msa0384390:intron | 40.0% | |
| TTCAGCTACTCTAATACACG+AGG | + | chr3_1:87451016-87451035 | Msa0384390:CDS | 40.0% | |
| TGCAAGCAAATACCGCATAA+TGG | - | chr3_1:87451712-87451731 | None:intergenic | 40.0% | |
| !! | TATTTAGTGACTTGCTGGAC+AGG | + | chr3_1:87451814-87451833 | Msa0384390:intron | 40.0% |
| AAATGACTTCAGGGTCTCAT+TGG | + | chr3_1:87452005-87452024 | Msa0384390:intron | 40.0% | |
| AATGACTTCAGGGTCTCATT+GGG | + | chr3_1:87452006-87452025 | Msa0384390:intron | 40.0% | |
| TGGCTGTACATATAACAGAG+AGG | + | chr3_1:87452249-87452268 | Msa0384390:CDS | 40.0% | |
| TACATATAACAGAGAGGCAG+AGG | + | chr3_1:87452255-87452274 | Msa0384390:CDS | 40.0% | |
| ACATATAACAGAGAGGCAGA+GGG | + | chr3_1:87452256-87452275 | Msa0384390:CDS | 40.0% | |
| TGCCCAATCCTAACATATAG+TGG | + | chr3_1:87452283-87452302 | Msa0384390:CDS | 40.0% | |
| GTAGGTCTCCACTATATGTT+AGG | - | chr3_1:87452294-87452313 | None:intergenic | 40.0% | |
| TCAATCAGAATACAGTAGCG+TGG | - | chr3_1:87452466-87452485 | None:intergenic | 40.0% | |
| AATGAGTAATGACAAGAGGG+TGG | - | chr3_1:87452554-87452573 | None:intergenic | 40.0% | |
| !!! | ACACGAAATTGTGTTTTGGC+TGG | + | chr3_1:87452578-87452597 | Msa0384390:intron | 40.0% |
| GGTGCAATAATCAGCTAATG+AGG | - | chr3_1:87452638-87452657 | None:intergenic | 40.0% | |
| ACTTCACCAAGCATTCTATC+AGG | - | chr3_1:87452715-87452734 | None:intergenic | 40.0% | |
| AAGTCAGAGGAAGTAACTCT+AGG | + | chr3_1:87452731-87452750 | Msa0384390:CDS | 40.0% | |
| ! | TTCTTTTGGATGCAGGTGTA+TGG | + | chr3_1:87452840-87452859 | Msa0384390:intron | 40.0% |
| CGTATTAATTCCACGGAGTA+GGG | - | chr3_1:87453135-87453154 | None:intergenic | 40.0% | |
| TCGTATTAATTCCACGGAGT+AGG | - | chr3_1:87453136-87453155 | None:intergenic | 40.0% | |
| AGAATTGGGAGCAATAGTCA+TGG | - | chr3_1:87453302-87453321 | None:intergenic | 40.0% | |
| !! | ATTCTGTTCCCTGGCTTTAA+TGG | + | chr3_1:87453586-87453605 | Msa0384390:CDS | 40.0% |
| ACATGAATTGGGACATTGAC+CGG | - | chr3_1:87453772-87453791 | None:intergenic | 40.0% | |
| TTCAATGGAGATTGTGTCGA+TGG | + | chr3_1:87453795-87453814 | Msa0384390:CDS | 40.0% | |
| ! | CGCTGCTTTATTGGATTTCA+TGG | + | chr3_1:87453825-87453844 | Msa0384390:CDS | 40.0% |
| ACCTAGAAGTAGTTAAGGGA+AGG | - | chr3_1:87453975-87453994 | None:intergenic | 40.0% | |
| ATTCACAGATCCCATTGGAA+AGG | - | chr3_1:87454033-87454052 | None:intergenic | 40.0% | |
| GGGATCTGTGAATGTAAAAC+TGG | + | chr3_1:87454040-87454059 | Msa0384390:CDS | 40.0% | |
| GAATGTAAAACTGGCTACAC+CGG | + | chr3_1:87454049-87454068 | Msa0384390:CDS | 40.0% | |
| TAAAAATTGGTGCGTACCAG+TGG | - | chr3_1:87454086-87454105 | None:intergenic | 40.0% | |
| GTATAAGACGTCCTCATTTC+TGG | + | chr3_1:87454145-87454164 | Msa0384390:intron | 40.0% | |
| GCTTGTTTCGTTCTATCTTG+TGG | + | chr3_1:87454197-87454216 | Msa0384390:intron | 40.0% | |
| TTTCGTTCTATCTTGTGGGT+TGG | + | chr3_1:87454202-87454221 | Msa0384390:intron | 40.0% | |
| TTCGTTCTATCTTGTGGGTT+GGG | + | chr3_1:87454203-87454222 | Msa0384390:intron | 40.0% | |
| ! | CCTTGTTATAATCAGGCATG+AGG | - | chr3_1:87454329-87454348 | None:intergenic | 40.0% |
| CCTCATGCCTGATTATAACA+AGG | + | chr3_1:87454326-87454345 | Msa0384390:intron | 40.0% | |
| ATGTAACCCAGTATGAGTGT+TGG | + | chr3_1:87454397-87454416 | Msa0384390:intron | 40.0% | |
| AGTACTCCAACACTCATACT+GGG | - | chr3_1:87454406-87454425 | None:intergenic | 40.0% | |
| AAGTACTCCAACACTCATAC+TGG | - | chr3_1:87454407-87454426 | None:intergenic | 40.0% | |
| ! | GATAATACGTTTGAGTGCTG+GGG | + | chr3_1:87454427-87454446 | Msa0384390:intron | 40.0% |
| !! | AGACACCACTTGTAGTTTTG+GGG | + | chr3_1:87454626-87454645 | Msa0384390:intron | 40.0% |
| ! | TGTATTGATCCATGCCTGAA+TGG | + | chr3_1:87454659-87454678 | Msa0384390:intron | 40.0% |
| TGCAAACTGAGAGACTAGAT+AGG | - | chr3_1:87454963-87454982 | None:intergenic | 40.0% | |
| GGGAATAATCGGTGGTAATT+TGG | - | chr3_1:87455075-87455094 | None:intergenic | 40.0% | |
| ! | AATTACCACCGATTATTCCC+TGG | + | chr3_1:87455075-87455094 | Msa0384390:CDS | 40.0% |
| ! | TAGTGCAAGTCCCATTTTGT+CGG | + | chr3_1:87455362-87455381 | Msa0384390:intron | 40.0% |
| AAAAAACCGTGGTAGGACTA+GGG | - | chr3_1:87455486-87455505 | None:intergenic | 40.0% | |
| TTTGGTCAAAAAACCGTGGT+AGG | - | chr3_1:87455493-87455512 | None:intergenic | 40.0% | |
| GTTCTTTGGTCAAAAAACCG+TGG | - | chr3_1:87455497-87455516 | None:intergenic | 40.0% | |
| GCCTATTTGTCTGAAGACTT+CGG | + | chr3_1:87455595-87455614 | Msa0384390:intron | 40.0% | |
| TATAAGATTGGCATGCGGAA+TGG | - | chr3_1:87455685-87455704 | None:intergenic | 40.0% | |
| TCAAAGAAAAACCACTTCGC+AGG | - | chr3_1:87455823-87455842 | None:intergenic | 40.0% | |
| AAAATCGCTAAAAGAAGGGG+CGG | - | chr3_1:87455900-87455919 | None:intergenic | 40.0% | |
| !!! | TGCAGATTTGGTTTTCCAAG+AGG | + | chr3_1:87455995-87456014 | Msa0384390:three_prime_UTR | 40.0% |
| CTTACAACTTACAAGGCCTT+CGG | - | chr3_1:87456143-87456162 | None:intergenic | 40.0% | |
| AGATTGGGTGTGTATGGAGT+GGG | - | chr3_1:87448435-87448454 | None:intergenic | 45.0% | |
| TAGATTGGGTGTGTATGGAG+TGG | - | chr3_1:87448436-87448455 | None:intergenic | 45.0% | |
| GGAGAAACAGTGACAGTGAA+CGG | - | chr3_1:87448502-87448521 | None:intergenic | 45.0% | |
| ! | TCGTGCGTTCTAAACCTGAT+CGG | + | chr3_1:87448793-87448812 | Msa0384390:five_prime_UTR | 45.0% |
| !!! | GGGTTTTGTTCTGAGAGCAA+TGG | + | chr3_1:87449208-87449227 | Msa0384390:intron | 45.0% |
| !! | GATTTGGCTCTAGATAGTGG+TGG | + | chr3_1:87449360-87449379 | Msa0384390:intron | 45.0% |
| AATTTGGTAGGACCCGGAAA+AGG | + | chr3_1:87449409-87449428 | Msa0384390:intron | 45.0% | |
| ATTTGGTAGGACCCGGAAAA+GGG | + | chr3_1:87449410-87449429 | Msa0384390:intron | 45.0% | |
| ! | GTATTTTTCCCCCCTTTTCC+GGG | - | chr3_1:87449424-87449443 | None:intergenic | 45.0% |
| TTCATGGGGCTTTGCATTGT+GGG | - | chr3_1:87449724-87449743 | None:intergenic | 45.0% | |
| CCCATGAAGACCAACTTCAA+TGG | + | chr3_1:87449736-87449755 | Msa0384390:CDS | 45.0% | |
| !! | CCCATTGAAGTTGGTCTTCA+TGG | - | chr3_1:87449740-87449759 | None:intergenic | 45.0% |
| TTCAATGGGGAGGTTTGGAA+AGG | + | chr3_1:87449751-87449770 | Msa0384390:CDS | 45.0% | |
| ACCTGGTCGCAAGGTTTATT+CGG | + | chr3_1:87449836-87449855 | Msa0384390:intron | 45.0% | |
| CTGAAGCCCCTTCAGAATAA+AGG | + | chr3_1:87449888-87449907 | Msa0384390:CDS | 45.0% | |
| AGCCCCTTCAGAATAAAGGT+AGG | + | chr3_1:87449892-87449911 | Msa0384390:CDS | 45.0% | |
| GGAACCAGAAAGAGAAGTTG+TGG | - | chr3_1:87450186-87450205 | None:intergenic | 45.0% | |
| ! | TCCCCTTTTTGCAATCCTCA+CGG | + | chr3_1:87450203-87450222 | Msa0384390:CDS | 45.0% |
| ACCGTGAGGATTGCAAAAAG+GGG | - | chr3_1:87450207-87450226 | None:intergenic | 45.0% | |
| CAACAATCGCCAACAATTGG+AGG | - | chr3_1:87450233-87450252 | None:intergenic | 45.0% | |
| CTCCAATTGTTGGCGATTGT+TGG | + | chr3_1:87450231-87450250 | Msa0384390:CDS | 45.0% | |
| AACACTTCACCTTACGAAGG+CGG | - | chr3_1:87450301-87450320 | None:intergenic | 45.0% | |
| ! | AGGCTGATAATCTTTTCCCG+TGG | + | chr3_1:87450349-87450368 | Msa0384390:intron | 45.0% |
| ! | GGCTGATAATCTTTTCCCGT+GGG | + | chr3_1:87450350-87450369 | Msa0384390:intron | 45.0% |
| AGCACCCAATAATTCTCCCA+CGG | - | chr3_1:87450369-87450388 | None:intergenic | 45.0% | |
| GATGACTTACTGCAGGCATT+AGG | + | chr3_1:87450501-87450520 | Msa0384390:intron | 45.0% | |
| !! | TGACTGGTTTAGGAGAGCAT+TGG | + | chr3_1:87450533-87450552 | Msa0384390:CDS | 45.0% |
| CTTCCTCGTGGATATATCGA+GGG | + | chr3_1:87450627-87450646 | Msa0384390:CDS | 45.0% | |
| TCTGGTGAAGATGAACAAGC+AGG | - | chr3_1:87450743-87450762 | None:intergenic | 45.0% | |
| GCTTGTTCATCTTCACCAGA+AGG | + | chr3_1:87450743-87450762 | Msa0384390:intron | 45.0% | |
| AAAGAACCAAGTCGGCATCA+GGG | - | chr3_1:87450772-87450791 | None:intergenic | 45.0% | |
| AAAAGAACCAAGTCGGCATC+AGG | - | chr3_1:87450773-87450792 | None:intergenic | 45.0% | |
| !!! | TGATGCCGACTTGGTTCTTT+TGG | + | chr3_1:87450772-87450791 | Msa0384390:CDS | 45.0% |
| AAATACACTTGCTTGGGCAG+TGG | + | chr3_1:87450817-87450836 | Msa0384390:CDS | 45.0% | |
| ! | TTTGGGATGCTCAGAACTGT+AGG | + | chr3_1:87450925-87450944 | Msa0384390:intron | 45.0% |
| ! | TAAAATGAGCGAAGGCGTGT+GGG | - | chr3_1:87451150-87451169 | None:intergenic | 45.0% |
| AGCGTGAATGCATGACAACA+CGG | - | chr3_1:87451688-87451707 | None:intergenic | 45.0% | |
| GCATTCACGCTACCATTATG+CGG | + | chr3_1:87451697-87451716 | Msa0384390:CDS | 45.0% | |
| ! | ACTGGCTTAGAACTGGAAGA+TGG | + | chr3_1:87451854-87451873 | Msa0384390:CDS | 45.0% |
| CTGGCTTAGAACTGGAAGAT+GGG | + | chr3_1:87451855-87451874 | Msa0384390:CDS | 45.0% | |
| TGGCTTAGAACTGGAAGATG+GGG | + | chr3_1:87451856-87451875 | Msa0384390:CDS | 45.0% | |
| AGATCTTGTATCCACGGAAC+CGG | - | chr3_1:87452062-87452081 | None:intergenic | 45.0% | |
| ! | TTGGCTCTCTTAGAAGACAG+TGG | + | chr3_1:87452100-87452119 | Msa0384390:CDS | 45.0% |
| CTCTCTTAGAAGACAGTGGA+TGG | + | chr3_1:87452104-87452123 | Msa0384390:CDS | 45.0% | |
| ACGGTCTGCCATGCTATAAT+TGG | - | chr3_1:87452137-87452156 | None:intergenic | 45.0% | |
| AATATTGTGCCCACTGAGGT+AGG | - | chr3_1:87452312-87452331 | None:intergenic | 45.0% | |
| GGAAAATATTGTGCCCACTG+AGG | - | chr3_1:87452316-87452335 | None:intergenic | 45.0% | |
| TCTGATTGATGTGTAGCTGC+TGG | + | chr3_1:87452477-87452496 | Msa0384390:intron | 45.0% | |
| ! | AGAATGCTTGGTGAAGTCAG+AGG | + | chr3_1:87452718-87452737 | Msa0384390:CDS | 45.0% |
| CTGATAACAACCATTGCCCT+GGG | - | chr3_1:87452908-87452927 | None:intergenic | 45.0% | |
| ! | AAGCTCCATGTTTTTCCTGC+AGG | + | chr3_1:87453516-87453535 | Msa0384390:intron | 45.0% |
| AGCAACCTGCAGGAAAAACA+TGG | - | chr3_1:87453524-87453543 | None:intergenic | 45.0% | |
| !! | TACAGAGCTCTGGATATGCA+GGG | - | chr3_1:87453728-87453747 | None:intergenic | 45.0% |
| !! | TTACAGAGCTCTGGATATGC+AGG | - | chr3_1:87453729-87453748 | None:intergenic | 45.0% |
| ATTGACCGGACACAGATACT+GGG | - | chr3_1:87453758-87453777 | None:intergenic | 45.0% | |
| ! | AGTGAGTACTGCATTGCTGA+AGG | - | chr3_1:87453933-87453952 | None:intergenic | 45.0% |
| GCCTTCCCTTAACTACTTCT+AGG | + | chr3_1:87453971-87453990 | Msa0384390:intron | 45.0% | |
| CATTACCATTGCAATTGCCG+GGG | - | chr3_1:87454003-87454022 | None:intergenic | 45.0% | |
| CCATTACCATTGCAATTGCC+GGG | - | chr3_1:87454004-87454023 | None:intergenic | 45.0% | |
| GCCATTACCATTGCAATTGC+CGG | - | chr3_1:87454005-87454024 | None:intergenic | 45.0% | |
| AATGGCATGTGCCTTTCCAA+TGG | + | chr3_1:87454019-87454038 | Msa0384390:CDS | 45.0% | |
| ATGGCATGTGCCTTTCCAAT+GGG | + | chr3_1:87454020-87454039 | Msa0384390:CDS | 45.0% | |
| AAGGTCAGATCCCAGAAATG+AGG | - | chr3_1:87454159-87454178 | None:intergenic | 45.0% | |
| !! | CAACCACCAATGGGTTACAT+AGG | + | chr3_1:87454591-87454610 | Msa0384390:intron | 45.0% |
| !!! | ACCACTTGTAGTTTTGGGGA+GGG | + | chr3_1:87454630-87454649 | Msa0384390:intron | 45.0% |
| ! | GATCCATGCCTGAATGGATT+AGG | + | chr3_1:87454665-87454684 | Msa0384390:intron | 45.0% |
| TGAGTGAGCCTAATCCATTC+AGG | - | chr3_1:87454676-87454695 | None:intergenic | 45.0% | |
| TATCACAAACCCCACCATGA+AGG | - | chr3_1:87454876-87454895 | None:intergenic | 45.0% | |
| ! | CATGGTGGGGTTTGTGATAA+TGG | + | chr3_1:87454877-87454896 | Msa0384390:CDS | 45.0% |
| TTCCGTTGTTCTGACTATGC+CGG | + | chr3_1:87454910-87454929 | Msa0384390:CDS | 45.0% | |
| ATCCGGCATAGTCAGAACAA+CGG | - | chr3_1:87454915-87454934 | None:intergenic | 45.0% | |
| TGAGAGACTAGATAGGAGCA+TGG | - | chr3_1:87454956-87454975 | None:intergenic | 45.0% | |
| TAGCACCACCAGGGAATAAT+CGG | - | chr3_1:87455086-87455105 | None:intergenic | 45.0% | |
| ATAACTTCCTAGCACCACCA+GGG | - | chr3_1:87455095-87455114 | None:intergenic | 45.0% | |
| AATAACTTCCTAGCACCACC+AGG | - | chr3_1:87455096-87455115 | None:intergenic | 45.0% | |
| GAAAAGACATCTTACCCAGC+AGG | - | chr3_1:87455166-87455185 | None:intergenic | 45.0% | |
| CAAAAAACCGTGGTAGGACT+AGG | - | chr3_1:87455487-87455506 | None:intergenic | 45.0% | |
| GCCGAAGTCTTCAGACAAAT+AGG | - | chr3_1:87455599-87455618 | None:intergenic | 45.0% | |
| ! | CTCAATCCAGAAGTGTGACA+AGG | + | chr3_1:87455634-87455653 | Msa0384390:CDS | 45.0% |
| ! | ATCCAGAAGTGTGACAAGGA+TGG | + | chr3_1:87455638-87455657 | Msa0384390:CDS | 45.0% |
| AGGATGGAGACAACAGACTT+CGG | + | chr3_1:87455654-87455673 | Msa0384390:CDS | 45.0% | |
| CAAACCCTCTTTAGCAGTGA+GGG | + | chr3_1:87455740-87455759 | Msa0384390:CDS | 45.0% | |
| CAATTTCATCTCCCCAAACC+CGG | - | chr3_1:87455786-87455805 | None:intergenic | 45.0% | |
| TTGGGGAGATGAAATTGTCG+TGG | + | chr3_1:87455789-87455808 | Msa0384390:CDS | 45.0% | |
| ! | GCCCCTTCTTTTAGCGATTT+TGG | + | chr3_1:87455899-87455918 | Msa0384390:three_prime_UTR | 45.0% |
| TCTACAAAAGGCTCTCCTCT+TGG | - | chr3_1:87456013-87456032 | None:intergenic | 45.0% | |
| ! | CGAAGGCCTTGTAAGTTGTA+AGG | + | chr3_1:87456141-87456160 | Msa0384390:three_prime_UTR | 45.0% |
| !! | ATAAATAAATAAATAAACAA+TGG | - | chr3_1:87448681-87448700 | None:intergenic | 5.0% |
| TTTGGTAGGACCCGGAAAAG+GGG | + | chr3_1:87449411-87449430 | Msa0384390:intron | 50.0% | |
| CTTCATGGGGCTTTGCATTG+TGG | - | chr3_1:87449725-87449744 | None:intergenic | 50.0% | |
| GAAGACCAACTTCAATGGGG+AGG | + | chr3_1:87449741-87449760 | Msa0384390:CDS | 50.0% | |
| CCAAACCTCCCCATTGAAGT+TGG | - | chr3_1:87449749-87449768 | None:intergenic | 50.0% | |
| CCAACTTCAATGGGGAGGTT+TGG | + | chr3_1:87449746-87449765 | Msa0384390:CDS | 50.0% | |
| CTTGAACAGAGAAAGCGACC+TGG | + | chr3_1:87449819-87449838 | Msa0384390:CDS | 50.0% | |
| ACCGAATAAACCTTGCGACC+AGG | - | chr3_1:87449840-87449859 | None:intergenic | 50.0% | |
| GGTTTATTCGGTTACCCCAC+AGG | + | chr3_1:87449848-87449867 | Msa0384390:intron | 50.0% | |
| CCAGAAAGAGAAGTTGTGGG+AGG | - | chr3_1:87450182-87450201 | None:intergenic | 50.0% | |
| CCTCCCACAACTTCTCTTTC+TGG | + | chr3_1:87450179-87450198 | Msa0384390:CDS | 50.0% | |
| ACAATTGGAGGGTTACCGTG+AGG | - | chr3_1:87450221-87450240 | None:intergenic | 50.0% | |
| CACGGTAACCCTCCAATTGT+TGG | + | chr3_1:87450221-87450240 | Msa0384390:CDS | 50.0% | |
| GCACCCAATAATTCTCCCAC+GGG | - | chr3_1:87450368-87450387 | None:intergenic | 50.0% | |
| CATTAGGTCAGACTGCTGAC+TGG | + | chr3_1:87450517-87450536 | Msa0384390:CDS | 50.0% | |
| !! | GTCAGACTGCTGACTGGTTT+AGG | + | chr3_1:87450523-87450542 | Msa0384390:CDS | 50.0% |
| ATTGGCTGTTGAGCCTGTCA+AGG | + | chr3_1:87450551-87450570 | Msa0384390:CDS | 50.0% | |
| TTGGCTGTTGAGCCTGTCAA+GGG | + | chr3_1:87450552-87450571 | Msa0384390:CDS | 50.0% | |
| AAGGGGAACTTGCGGTTAAG+TGG | + | chr3_1:87450570-87450589 | Msa0384390:CDS | 50.0% | |
| TCTGCATGTGGACAAGATGG+AGG | + | chr3_1:87450597-87450616 | Msa0384390:CDS | 50.0% | |
| GCTTCCTCGTGGATATATCG+AGG | + | chr3_1:87450626-87450645 | Msa0384390:CDS | 50.0% | |
| GTACCCTCGATATATCCACG+AGG | - | chr3_1:87450633-87450652 | None:intergenic | 50.0% | |
| TCTCTGCCTCAGCAGTCAAA+TGG | - | chr3_1:87450989-87451008 | None:intergenic | 50.0% | |
| AAATGAGATTGGAGCAGGGG+AGG | + | chr3_1:87451062-87451081 | Msa0384390:intron | 50.0% | |
| ! | GAGCAGGGGAGGTAATTTGT+AGG | + | chr3_1:87451073-87451092 | Msa0384390:intron | 50.0% |
| ! | CTAAAATGAGCGAAGGCGTG+TGG | - | chr3_1:87451151-87451170 | None:intergenic | 50.0% |
| AAGGAAAAGACGGCGTGATC+AGG | + | chr3_1:87451177-87451196 | Msa0384390:CDS | 50.0% | |
| AGACGGCGTGATCAGGTATA+TGG | + | chr3_1:87451184-87451203 | Msa0384390:intron | 50.0% | |
| GGATGAAAAGCTTGGACGGA+TGG | + | chr3_1:87451643-87451662 | Msa0384390:CDS | 50.0% | |
| CGTGAATGCATGACAACACG+GGG | - | chr3_1:87451686-87451705 | None:intergenic | 50.0% | |
| GCGTGAATGCATGACAACAC+GGG | - | chr3_1:87451687-87451706 | None:intergenic | 50.0% | |
| GGCTTAGAACTGGAAGATGG+GGG | + | chr3_1:87451857-87451876 | Msa0384390:CDS | 50.0% | |
| TTAGAACTGGAAGATGGGGG+AGG | + | chr3_1:87451860-87451879 | Msa0384390:CDS | 50.0% | |
| CAGGGTCTCATTGGGAGAAA+AGG | + | chr3_1:87452014-87452033 | Msa0384390:intron | 50.0% | |
| ! | TGAGATTATGACCGGTTCCG+TGG | + | chr3_1:87452048-87452067 | Msa0384390:CDS | 50.0% |
| CATGGCAGACCGTCTTGATT+GGG | + | chr3_1:87452144-87452163 | Msa0384390:CDS | 50.0% | |
| ATGGCAGACCGTCTTGATTG+GGG | + | chr3_1:87452145-87452164 | Msa0384390:CDS | 50.0% | |
| TTACCTCCCCTTGCAATCTC+TGG | + | chr3_1:87452191-87452210 | Msa0384390:CDS | 50.0% | |
| ! | TCCCCTTGCAATCTCTGGAA+GGG | + | chr3_1:87452196-87452215 | Msa0384390:CDS | 50.0% |
| TCCCTTCCAGAGATTGCAAG+GGG | - | chr3_1:87452200-87452219 | None:intergenic | 50.0% | |
| CTCCCTTCCAGAGATTGCAA+GGG | - | chr3_1:87452201-87452220 | None:intergenic | 50.0% | |
| ! | ATAGTGGAGACCTACCTCAG+TGG | + | chr3_1:87452299-87452318 | Msa0384390:CDS | 50.0% |
| TAGTGGAGACCTACCTCAGT+GGG | + | chr3_1:87452300-87452319 | Msa0384390:CDS | 50.0% | |
| ATCAGGTGCTCGTGCACTAT+TGG | - | chr3_1:87452698-87452717 | None:intergenic | 50.0% | |
| CGAGCACCTGATAGAATGCT+TGG | + | chr3_1:87452706-87452725 | Msa0384390:CDS | 50.0% | |
| GCAGTCTGGTGCACAATTTG+CGG | - | chr3_1:87452769-87452788 | None:intergenic | 50.0% | |
| TCCTGTGCGCACTAATGATG+AGG | - | chr3_1:87452866-87452885 | None:intergenic | 50.0% | |
| ! | TGTACGTGGTTCTATGACCC+AGG | + | chr3_1:87452888-87452907 | Msa0384390:CDS | 50.0% |
| ! | GTACGTGGTTCTATGACCCA+GGG | + | chr3_1:87452889-87452908 | Msa0384390:CDS | 50.0% |
| GCTGATAACAACCATTGCCC+TGG | - | chr3_1:87452909-87452928 | None:intergenic | 50.0% | |
| TTGGGAGCAATAGTCATGGC+AGG | - | chr3_1:87453298-87453317 | None:intergenic | 50.0% | |
| ! | GTTTTTCCTGCAGGTTGCTG+TGG | + | chr3_1:87453525-87453544 | Msa0384390:intron | 50.0% |
| AGGTTGCTGTGGATGGTATC+TGG | + | chr3_1:87453536-87453555 | Msa0384390:intron | 50.0% | |
| TCTGACCCAGTATCTGTGTC+CGG | + | chr3_1:87453750-87453769 | Msa0384390:CDS | 50.0% | |
| CATTGACCGGACACAGATAC+TGG | - | chr3_1:87453759-87453778 | None:intergenic | 50.0% | |
| ! | GGAAGATGCCGCTGCTTTAT+TGG | + | chr3_1:87453816-87453835 | Msa0384390:CDS | 50.0% |
| CTACTTCTAGGTTCTTGCCC+CGG | + | chr3_1:87453983-87454002 | Msa0384390:intron | 50.0% | |
| CCCGGCAATTGCAATGGTAA+TGG | + | chr3_1:87454001-87454020 | Msa0384390:CDS | 50.0% | |
| !! | TTGAGTGCTGGGGTTCCTTT+AGG | + | chr3_1:87454437-87454456 | Msa0384390:intron | 50.0% |
| CAGCCTATGTAACCCATTGG+TGG | - | chr3_1:87454597-87454616 | None:intergenic | 50.0% | |
| !! | CACCAATGGGTTACATAGGC+TGG | + | chr3_1:87454595-87454614 | Msa0384390:intron | 50.0% |
| CACCAGCCTATGTAACCCAT+TGG | - | chr3_1:87454600-87454619 | None:intergenic | 50.0% | |
| !!! | CACCACTTGTAGTTTTGGGG+AGG | + | chr3_1:87454629-87454648 | Msa0384390:intron | 50.0% |
| GAGCCTAATCCATTCAGGCA+TGG | - | chr3_1:87454671-87454690 | None:intergenic | 50.0% | |
| CACAGCTGCATGTGGTATGA+AGG | - | chr3_1:87454836-87454855 | None:intergenic | 50.0% | |
| TCATCACACACAGCTGCATG+TGG | - | chr3_1:87454844-87454863 | None:intergenic | 50.0% | |
| GATGAGCAATGCAGCCTTCA+TGG | + | chr3_1:87454859-87454878 | Msa0384390:CDS | 50.0% | |
| AGCAATGCAGCCTTCATGGT+GGG | + | chr3_1:87454863-87454882 | Msa0384390:CDS | 50.0% | |
| GCTGTTCTGGCATGTGTATC+CGG | - | chr3_1:87454932-87454951 | None:intergenic | 50.0% | |
| ! | ATAGGAGCATGGAGCTGTTC+TGG | - | chr3_1:87454945-87454964 | None:intergenic | 50.0% |
| TCCAACTGCTGCAGTATGCT+AGG | - | chr3_1:87455036-87455055 | None:intergenic | 50.0% | |
| ACTGCAGCAGTTGGAAGAAG+TGG | + | chr3_1:87455041-87455060 | Msa0384390:CDS | 50.0% | |
| ! | TACCACCGATTATTCCCTGG+TGG | + | chr3_1:87455078-87455097 | Msa0384390:CDS | 50.0% |
| ! | GATTATTCCCTGGTGGTGCT+AGG | + | chr3_1:87455085-87455104 | Msa0384390:CDS | 50.0% |
| TTTAGCAGCCTCGTCACAGT+AGG | - | chr3_1:87455136-87455155 | None:intergenic | 50.0% | |
| ACTGTGACGAGGCTGCTAAA+CGG | + | chr3_1:87455136-87455155 | Msa0384390:CDS | 50.0% | |
| ATACCTCCCTAGTCCTACCA+CGG | + | chr3_1:87455477-87455496 | Msa0384390:intron | 50.0% | |
| CTCCATCCTTGTCACACTTC+TGG | - | chr3_1:87455643-87455662 | None:intergenic | 50.0% | |
| GGATGGAGACAACAGACTTC+GGG | + | chr3_1:87455655-87455674 | Msa0384390:CDS | 50.0% | |
| CCTCACTGCTAAAGAGGGTT+TGG | - | chr3_1:87455742-87455761 | None:intergenic | 50.0% | |
| CCAAACCCTCTTTAGCAGTG+AGG | + | chr3_1:87455739-87455758 | Msa0384390:CDS | 50.0% | |
| ! | GATTGTCAAGCTTTGGCCGA+AGG | + | chr3_1:87456124-87456143 | Msa0384390:three_prime_UTR | 50.0% |
| TTGGGTGTGTATGGAGTGGG+TGG | - | chr3_1:87448432-87448451 | None:intergenic | 55.0% | |
| TCGCCGGTGAATTTCCGATC+AGG | - | chr3_1:87448810-87448829 | None:intergenic | 55.0% | |
| TTGGTAGGACCCGGAAAAGG+GGG | + | chr3_1:87449412-87449431 | Msa0384390:intron | 55.0% | |
| ACCAGGCTCGTAAACCTGTG+GGG | - | chr3_1:87449865-87449884 | None:intergenic | 55.0% | |
| GACCAGGCTCGTAAACCTGT+GGG | - | chr3_1:87449866-87449885 | None:intergenic | 55.0% | |
| GACAATCTCTGTCAGGGGAG+TGG | - | chr3_1:87450004-87450023 | None:intergenic | 55.0% | |
| !! | CAAAAAGCGCCGCCTTCGTA+AGG | + | chr3_1:87450289-87450308 | Msa0384390:CDS | 55.0% |
| ACATCTCTTTGGGCAGTGGG+AGG | + | chr3_1:87450411-87450430 | Msa0384390:intron | 55.0% | |
| CATCTCTTTGGGCAGTGGGA+GGG | + | chr3_1:87450412-87450431 | Msa0384390:intron | 55.0% | |
| ATCTCTTTGGGCAGTGGGAG+GGG | + | chr3_1:87450413-87450432 | Msa0384390:intron | 55.0% | |
| TGGCTGTTGAGCCTGTCAAG+GGG | + | chr3_1:87450553-87450572 | Msa0384390:CDS | 55.0% | |
| AGCCTGTCAAGGGGAACTTG+CGG | + | chr3_1:87450562-87450581 | Msa0384390:CDS | 55.0% | |
| AACCGCAAGTTCCCCTTGAC+AGG | - | chr3_1:87450567-87450586 | None:intergenic | 55.0% | |
| TGGCGTGTGAACGGGATCAA+TGG | + | chr3_1:87450837-87450856 | Msa0384390:CDS | 55.0% | |
| GGCGTGTGAACGGGATCAAT+GGG | + | chr3_1:87450838-87450857 | Msa0384390:CDS | 55.0% | |
| GCGTGTGAACGGGATCAATG+GGG | + | chr3_1:87450839-87450858 | Msa0384390:CDS | 55.0% | |
| TCCTCGCCATTTGACTGCTG+AGG | + | chr3_1:87450980-87450999 | Msa0384390:CDS | 55.0% | |
| TGGACGGATGGTCAATCGAG+TGG | + | chr3_1:87451655-87451674 | Msa0384390:CDS | 55.0% | |
| CTTGCTGGACAGGCATACTC+TGG | + | chr3_1:87451824-87451843 | Msa0384390:intron | 55.0% | |
| GCATGGCAGACCGTCTTGAT+TGG | + | chr3_1:87452143-87452162 | Msa0384390:CDS | 55.0% | |
| GGTTGCGACCCCAATCAAGA+CGG | - | chr3_1:87452156-87452175 | None:intergenic | 55.0% | |
| CTTGATTGGGGTCGCAACCA+AGG | + | chr3_1:87452157-87452176 | Msa0384390:intron | 55.0% | |
| CTTCCAGAGATTGCAAGGGG+AGG | - | chr3_1:87452197-87452216 | None:intergenic | 55.0% | |
| CTCCCCTTGCAATCTCTGGA+AGG | + | chr3_1:87452195-87452214 | Msa0384390:CDS | 55.0% | |
| GCTCCCTTCCAGAGATTGCA+AGG | - | chr3_1:87452202-87452221 | None:intergenic | 55.0% | |
| TAACCTCCGCTCGTTGATGC+AGG | + | chr3_1:87452604-87452623 | Msa0384390:intron | 55.0% | |
| TGTCCACCTGCATCAACGAG+CGG | - | chr3_1:87452613-87452632 | None:intergenic | 55.0% | |
| GCCTCATCATTAGTGCGCAC+AGG | + | chr3_1:87452862-87452881 | Msa0384390:CDS | 55.0% | |
| GTGCGCACAGGATTTGTACG+TGG | + | chr3_1:87452874-87452893 | Msa0384390:CDS | 55.0% | |
| GGTTCTATGACCCAGGGCAA+TGG | + | chr3_1:87452895-87452914 | Msa0384390:CDS | 55.0% | |
| TTCCTGCAGGTTGCTGTGGA+TGG | + | chr3_1:87453529-87453548 | Msa0384390:intron | 55.0% | |
| TACCATCCACAGCAACCTGC+AGG | - | chr3_1:87453534-87453553 | None:intergenic | 55.0% | |
| ! | TGGAAAGTGTGTCCTCGTGC+TGG | + | chr3_1:87453556-87453575 | Msa0384390:CDS | 55.0% |
| AAAGTGTGTCCTCGTGCTGG+TGG | + | chr3_1:87453559-87453578 | Msa0384390:CDS | 55.0% | |
| AGAATAGCTCCACCAGCACG+AGG | - | chr3_1:87453571-87453590 | None:intergenic | 55.0% | |
| GGTGGAGCTATTCTGTTCCC+TGG | + | chr3_1:87453577-87453596 | Msa0384390:CDS | 55.0% | |
| GGGTCAGAGTTACAGAGCTC+TGG | - | chr3_1:87453738-87453757 | None:intergenic | 55.0% | |
| TCTTGCCCCGGCAATTGCAA+TGG | + | chr3_1:87453995-87454014 | Msa0384390:CDS | 55.0% | |
| ACCAGTGGAACAGTCGATGC+CGG | - | chr3_1:87454071-87454090 | None:intergenic | 55.0% | |
| GCCCTCCCCAAAACTACAAG+TGG | - | chr3_1:87454634-87454653 | None:intergenic | 55.0% | |
| TTAGGCTCACTCACACCCCA+AGG | + | chr3_1:87454683-87454702 | Msa0384390:intron | 55.0% | |
| TAGGCTCACTCACACCCCAA+GGG | + | chr3_1:87454684-87454703 | Msa0384390:intron | 55.0% | |
| !! | ACTCACACCCCAAGGGTACT+GGG | + | chr3_1:87454691-87454710 | Msa0384390:intron | 55.0% |
| GTATCCTCCCAGTACCCTTG+GGG | - | chr3_1:87454701-87454720 | None:intergenic | 55.0% | |
| GGTATCCTCCCAGTACCCTT+GGG | - | chr3_1:87454702-87454721 | None:intergenic | 55.0% | |
| GAGCAATGCAGCCTTCATGG+TGG | + | chr3_1:87454862-87454881 | Msa0384390:CDS | 55.0% | |
| GCAATGCAGCCTTCATGGTG+GGG | + | chr3_1:87454864-87454883 | Msa0384390:CDS | 55.0% | |
| TGCAGTATGCTAGGCTCGCT+GGG | - | chr3_1:87455027-87455046 | None:intergenic | 55.0% | |
| GCCTAGCATACTGCAGCAGT+TGG | + | chr3_1:87455032-87455051 | Msa0384390:CDS | 55.0% | |
| CACCACCAGGGAATAATCGG+TGG | - | chr3_1:87455083-87455102 | None:intergenic | 55.0% | |
| TGCTAAACGGCTTGCCTGCT+GGG | + | chr3_1:87455149-87455168 | Msa0384390:CDS | 55.0% | |
| AAACCGTGGTAGGACTAGGG+AGG | - | chr3_1:87455483-87455502 | None:intergenic | 55.0% | |
| CTCGCCCTCACTGCTAAAGA+GGG | - | chr3_1:87455747-87455766 | None:intergenic | 55.0% | |
| CTCTTTAGCAGTGAGGGCGA+GGG | + | chr3_1:87455746-87455765 | Msa0384390:CDS | 55.0% | |
| TCTTTAGCAGTGAGGGCGAG+GGG | + | chr3_1:87455747-87455766 | Msa0384390:CDS | 55.0% | |
| TGGTTTAGTCGCCTGCGAAG+TGG | + | chr3_1:87455809-87455828 | Msa0384390:CDS | 55.0% | |
| TCGCTAAAAGAAGGGGCGGA+AGG | - | chr3_1:87455896-87455915 | None:intergenic | 55.0% | |
| TGGTAGGACCCGGAAAAGGG+GGG | + | chr3_1:87449413-87449432 | Msa0384390:intron | 60.0% | |
| GAGAAAGCGACCTGGTCGCA+AGG | + | chr3_1:87449827-87449846 | Msa0384390:CDS | 60.0% | |
| ACCCCACAGGTTTACGAGCC+TGG | + | chr3_1:87449861-87449880 | Msa0384390:intron | 60.0% | |
| CGACCAGGCTCGTAAACCTG+TGG | - | chr3_1:87449867-87449886 | None:intergenic | 60.0% | |
| TGAAGGGGCTTCAGTCGACC+AGG | - | chr3_1:87449882-87449901 | None:intergenic | 60.0% | |
| TCGGCATCAGGGACACCTTC+TGG | - | chr3_1:87450761-87450780 | None:intergenic | 60.0% | |
| ! | AGGTGTCCCTGATGCCGACT+TGG | + | chr3_1:87450763-87450782 | Msa0384390:CDS | 60.0% |
| CTTGGGCAGTGGCGTGTGAA+CGG | + | chr3_1:87450828-87450847 | Msa0384390:CDS | 60.0% | |
| TTGGGCAGTGGCGTGTGAAC+GGG | + | chr3_1:87450829-87450848 | Msa0384390:CDS | 60.0% | |
| CAATGGGGCCGTGCTATAGC+TGG | + | chr3_1:87450854-87450873 | Msa0384390:CDS | 60.0% | |
| GCCTCAGCAGTCAAATGGCG+AGG | - | chr3_1:87450984-87451003 | None:intergenic | 60.0% | |
| ATCGCATCAGCCCTACTCCG+TGG | + | chr3_1:87453122-87453141 | Msa0384390:intron | 60.0% | |
| !! | ACCGGCATCGACTGTTCCAC+TGG | + | chr3_1:87454067-87454086 | Msa0384390:CDS | 60.0% |
| ! | CACTCACACCCCAAGGGTAC+TGG | + | chr3_1:87454690-87454709 | Msa0384390:intron | 60.0% |
| GGGTATCCTCCCAGTACCCT+TGG | - | chr3_1:87454703-87454722 | None:intergenic | 60.0% | |
| CTGCAGTATGCTAGGCTCGC+TGG | - | chr3_1:87455028-87455047 | None:intergenic | 60.0% | |
| TGGCAGCACCTACTGTGACG+AGG | + | chr3_1:87455125-87455144 | Msa0384390:CDS | 60.0% | |
| CTGCTAAACGGCTTGCCTGC+TGG | + | chr3_1:87455148-87455167 | Msa0384390:CDS | 60.0% | |
| CCTCGCCCTCACTGCTAAAG+AGG | - | chr3_1:87455748-87455767 | None:intergenic | 60.0% | |
| CCTCTTTAGCAGTGAGGGCG+AGG | + | chr3_1:87455745-87455764 | Msa0384390:CDS | 60.0% | |
| CTTTAGCAGTGAGGGCGAGG+GGG | + | chr3_1:87455748-87455767 | Msa0384390:CDS | 60.0% | |
| AGGGTCAGTGCACCGGGTTT+GGG | + | chr3_1:87455771-87455790 | Msa0384390:CDS | 60.0% | |
| CTGGAAGATGGGGGAGGACG+CGG | + | chr3_1:87451866-87451885 | Msa0384390:CDS | 65.0% | |
| CCACCTGCATCAACGAGCGG+AGG | - | chr3_1:87452610-87452629 | None:intergenic | 65.0% | |
| CCTCCGCTCGTTGATGCAGG+TGG | + | chr3_1:87452607-87452626 | Msa0384390:intron | 65.0% | |
| !! | CACACCCCAAGGGTACTGGG+AGG | + | chr3_1:87454694-87454713 | Msa0384390:intron | 65.0% |
| GAGGGTCAGTGCACCGGGTT+TGG | + | chr3_1:87455770-87455789 | Msa0384390:CDS | 65.0% | |
| GGGTCAGTGCACCGGGTTTG+GGG | + | chr3_1:87455772-87455791 | Msa0384390:CDS | 65.0% | |
| ! | GGAGGCGTGCAGCTTCCTCG+TGG | + | chr3_1:87450615-87450634 | Msa0384390:CDS | 70.0% |
| TAGCAGTGAGGGCGAGGGGG+AGG | + | chr3_1:87455751-87455770 | Msa0384390:CDS | 70.0% | |
| AGCAGTGAGGGCGAGGGGGA+GGG | + | chr3_1:87455752-87455771 | Msa0384390:CDS | 70.0% | |
| GAGGGGGAGGGTCAGTGCAC+CGG | + | chr3_1:87455764-87455783 | Msa0384390:CDS | 70.0% | |
| AGGGGGAGGGTCAGTGCACC+GGG | + | chr3_1:87455765-87455784 | Msa0384390:CDS | 70.0% | |
| GGGGGAGGACGCGGCACATC+AGG | + | chr3_1:87451875-87451894 | Msa0384390:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 87448409 | 87456227 | 87448409 | ID=Msa0384390;Name=Msa0384390 |
| chr3_1 | mRNA | 87448409 | 87456227 | 87448409 | ID=Msa0384390-mRNA-1;Parent=Msa0384390;Name=Msa0384390-mRNA-1;_AED=0.10;_eAED=0.10;_QI=465|0.84|0.7|1|0.84|0.8|20|335|839 |
| chr3_1 | exon | 87448409 | 87448942 | 87448409 | ID=Msa0384390-mRNA-1:exon:23375;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87449693 | 87449848 | 87449693 | ID=Msa0384390-mRNA-1:exon:23376;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87449870 | 87450046 | 87449870 | ID=Msa0384390-mRNA-1:exon:23377;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87450170 | 87450310 | 87450170 | ID=Msa0384390-mRNA-1:exon:23378;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87450516 | 87450648 | 87450516 | ID=Msa0384390-mRNA-1:exon:23379;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87450762 | 87450875 | 87450762 | ID=Msa0384390-mRNA-1:exon:23380;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87450964 | 87451037 | 87450964 | ID=Msa0384390-mRNA-1:exon:23381;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87451124 | 87451198 | 87451124 | ID=Msa0384390-mRNA-1:exon:23382;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87451626 | 87451718 | 87451626 | ID=Msa0384390-mRNA-1:exon:23383;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87451836 | 87451896 | 87451836 | ID=Msa0384390-mRNA-1:exon:23384;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87452017 | 87452166 | 87452017 | ID=Msa0384390-mRNA-1:exon:23385;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87452179 | 87452349 | 87452179 | ID=Msa0384390-mRNA-1:exon:23386;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87452626 | 87452752 | 87452626 | ID=Msa0384390-mRNA-1:exon:23387;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87452855 | 87452954 | 87452855 | ID=Msa0384390-mRNA-1:exon:23388;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87453538 | 87453607 | 87453538 | ID=Msa0384390-mRNA-1:exon:23389;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87453712 | 87453864 | 87453712 | ID=Msa0384390-mRNA-1:exon:23390;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87453993 | 87454088 | 87453993 | ID=Msa0384390-mRNA-1:exon:23391;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87454851 | 87454993 | 87454851 | ID=Msa0384390-mRNA-1:exon:23392;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87455015 | 87455170 | 87455015 | ID=Msa0384390-mRNA-1:exon:23393;Parent=Msa0384390-mRNA-1 |
| chr3_1 | exon | 87455632 | 87456227 | 87455632 | ID=Msa0384390-mRNA-1:exon:23394;Parent=Msa0384390-mRNA-1 |
| chr3_1 | five_prime_UTR | 87448409 | 87448873 | 87448409 | ID=Msa0384390-mRNA-1:five_prime_utr;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87448874 | 87448942 | 87448874 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87449693 | 87449848 | 87449693 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87449870 | 87450046 | 87449870 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87450170 | 87450310 | 87450170 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87450516 | 87450648 | 87450516 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87450762 | 87450875 | 87450762 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87450964 | 87451037 | 87450964 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87451124 | 87451198 | 87451124 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87451626 | 87451718 | 87451626 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87451836 | 87451896 | 87451836 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87452017 | 87452166 | 87452017 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87452179 | 87452349 | 87452179 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87452626 | 87452752 | 87452626 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87452855 | 87452954 | 87452855 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87453538 | 87453607 | 87453538 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87453712 | 87453864 | 87453712 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87453993 | 87454088 | 87453993 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87454851 | 87454993 | 87454851 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87455015 | 87455170 | 87455015 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | CDS | 87455632 | 87455892 | 87455632 | ID=Msa0384390-mRNA-1:cds;Parent=Msa0384390-mRNA-1 |
| chr3_1 | three_prime_UTR | 87455893 | 87456227 | 87455893 | ID=Msa0384390-mRNA-1:three_prime_utr;Parent=Msa0384390-mRNA-1 |
| Gene Sequence |
| Protein sequence |