AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0478610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0478610 MtrunA17_Chr3g0141351 98.921 834 9 0 4 837 24 857 0.0 1721
Msa0478610 MtrunA17_Chr1g0154601 81.078 835 150 5 4 837 33 860 0.0 1401
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0478610 AT5G42620.2 79.976 819 158 3 1 817 22 836 0.0 1376
Msa0478610 AT5G42620.1 79.976 819 158 3 1 817 22 836 0.0 1374

Find 285 sgRNAs with CRISPR-Local

Find 572 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAGAGAAAATTGAAATTT+AGG 0.094408 3_3:-83422975 Msa0478610:three_prime_UTR
CCCATTGAAGTTGGTCTTCA+TGG 0.158821 3_3:+83429264 None:intergenic
CTCCATCCTTGTCACACTTC+TGG 0.169398 3_3:+83423362 None:intergenic
CATATTGATATTGGCATCTT+TGG 0.179276 3_3:-83429306 Msa0478610:CDS
AGGAAGTTATTTAATATATT+TGG 0.180961 3_3:-83423897 Msa0478610:CDS
AGAAATAATAGTTCTTTAAA+AGG 0.195739 3_3:-83423160 Msa0478610:CDS
TAATTTAAGTCCTTAGATTT+AGG 0.203342 3_3:-83423076 Msa0478610:three_prime_UTR
TCCATTGAAATTACATGAAT+TGG 0.207593 3_3:+83425215 None:intergenic
CGCTGCTTTATTGGATTTCA+TGG 0.213560 3_3:-83425171 Msa0478610:CDS
CAGGGTCAGTGCACCGGGTT+TGG 0.218121 3_3:-83423232 Msa0478610:CDS
GGGAATAATCGGTGGTAATT+TGG 0.219708 3_3:+83423930 None:intergenic
GGAAGATGCCGCTGCTTTAT+TGG 0.223800 3_3:-83425180 Msa0478610:CDS
TTTCAGGTTATGCATGTTCT+TGG 0.231729 3_3:-83427886 Msa0478610:intron
AGGGTCAGTGCACCGGGTTT+GGG 0.240712 3_3:-83423231 Msa0478610:CDS
ATTGGATGAGATTGCAGATT+TGG 0.248227 3_3:-83423019 Msa0478610:three_prime_UTR
ATTCTGTTCCCTGGCTTTAA+TGG 0.249214 3_3:-83425410 Msa0478610:intron
GTAGAGAAAATTGAAATTTA+GGG 0.250808 3_3:-83422974 Msa0478610:three_prime_UTR
TGATGCCGACTTGGTTCTTT+TGG 0.270943 3_3:-83428232 Msa0478610:CDS
TTCATGGGGCTTTGCATTGT+GGG 0.285571 3_3:+83429280 None:intergenic
CTGCTAAACGGCTTGCCTGC+TGG 0.285813 3_3:-83423854 Msa0478610:CDS
ACCTGGTCGCAAGGTTTATT+CGG 0.289134 3_3:-83429165 Msa0478610:CDS
TGTGCAGATCATATTGATAT+TGG 0.290859 3_3:-83429315 Msa0478610:intron
TTTCTCATCCAAAATTGTTT+AGG 0.300648 3_3:-83423046 Msa0478610:three_prime_UTR
CATTGACCGGACACAGATAC+TGG 0.304385 3_3:+83425240 None:intergenic
CATGGTGGGGTTTGTGATAA+TGG 0.308820 3_3:-83424125 Msa0478610:CDS
TAATTTAGATATATCCTAAT+AGG 0.313647 3_3:+83429035 None:intergenic
GCCATTACCATTGCAATTGC+CGG 0.319245 3_3:+83424994 None:intergenic
TAGCAGTGAGGGCGAGGGGC+AGG 0.326693 3_3:-83423251 Msa0478610:CDS
CCTCCCACAACTTCTCTTCC+TGG 0.327337 3_3:-83428822 Msa0478610:CDS
ATAGGAGCATGGAGCTGTTC+TGG 0.332445 3_3:+83424060 None:intergenic
GCTTTCTCTGTTCAAGAATC+TGG 0.340458 3_3:+83429189 None:intergenic
ATCAGGTGCTCGTGCACTAT+TGG 0.344459 3_3:+83426309 None:intergenic
ACGGTCTGCCATGCTATAAT+TGG 0.345396 3_3:+83426870 None:intergenic
TTACCTCCCCTTGCAATCTC+TGG 0.345906 3_3:-83426813 Msa0478610:CDS
CTGCAGTATGCTAGGCTCGC+TGG 0.352288 3_3:+83423977 None:intergenic
GAGGGGCAGGGTCAGTGCAC+CGG 0.352960 3_3:-83423238 Msa0478610:CDS
ATGTATAAACAGTTCTTTAG+AGG 0.353642 3_3:-83426071 Msa0478610:intron
TGCTAAACGGCTTGCCTGCT+GGG 0.353696 3_3:-83423853 Msa0478610:intron
GTCAGACTGCTGACTGGTTT+AGG 0.359031 3_3:-83428478 Msa0478610:CDS
TTACCGTGAGGATTGCAAAA+AGG 0.366073 3_3:+83428795 None:intergenic
CCATTGAAGTTGGTCTTCAT+GGG 0.369078 3_3:+83429265 None:intergenic
CCAACTTCAATGGGGAGGTT+TGG 0.373237 3_3:-83429255 Msa0478610:CDS
AAAGCAACCTCCTAAATCTA+AGG 0.373467 3_3:+83423066 None:intergenic
ATCAGAGTACGCAACAAAAT+AGG 0.374486 3_3:+83426348 None:intergenic
ATGATGTGAAGGAACCTATT+AGG 0.380281 3_3:-83429049 Msa0478610:CDS
TGCAGTATGCTAGGCTCGCT+GGG 0.380482 3_3:+83423978 None:intergenic
CTGAAGCCCCTTCAGAATAA+AGG 0.390838 3_3:-83429113 Msa0478610:CDS
CCCAATTCATGTAATTTCAA+TGG 0.391322 3_3:-83425216 Msa0478610:CDS
AAGGAATGTCTGTAAGATAT+AGG 0.393336 3_3:-83423141 Msa0478610:CDS
CATGGCAGACCGTCTTGATT+GGG 0.394002 3_3:-83426860 Msa0478610:CDS
AAATGACTTCAGGGTCTCAT+TGG 0.396953 3_3:-83426999 Msa0478610:intron
AGGTTGCTGTGGATGGTATC+TGG 0.397438 3_3:-83425460 Msa0478610:CDS
TGGCGTGTGAACGGGATCAA+TGG 0.400474 3_3:-83428167 Msa0478610:CDS
TGCAACACAACACAATATTC+TGG 0.400913 3_3:-83426775 Msa0478610:CDS
GATGAGCAATGCAGCCTTCA+TGG 0.402108 3_3:-83424143 Msa0478610:CDS
GATGACTTACTGCAGGCATT+AGG 0.402245 3_3:-83428500 Msa0478610:intron
ACCCCACAGGTTTACGAGCC+TGG 0.403004 3_3:-83429140 Msa0478610:CDS
GGGATCTGTGAATGTAAAAC+TGG 0.407193 3_3:-83424956 Msa0478610:CDS
GCAAGTGTATTTCCAGTTGT+AGG 0.408439 3_3:+83428198 None:intergenic
GGCGTGTGAACGGGATCAAT+GGG 0.408923 3_3:-83428166 Msa0478610:CDS
ATGATACGATTGTCAAGCTT+TGG 0.409849 3_3:-83422883 Msa0478610:three_prime_UTR
CTTCATGGGGCTTTGCATTG+TGG 0.417614 3_3:+83429279 None:intergenic
CTCCAATTGTTGGCGATTGT+TGG 0.418762 3_3:-83428770 Msa0478610:CDS
AAAAGAACCAAGTCGGCATC+AGG 0.420245 3_3:+83428234 None:intergenic
GTAGGTCTCCACTATATGTT+AGG 0.420425 3_3:+83426713 None:intergenic
TACCAACAATCGCCAACAAT+TGG 0.420987 3_3:+83428768 None:intergenic
CAGGGTCTCATTGGGAGAAA+AGG 0.421081 3_3:-83426990 Msa0478610:CDS
TCTACAAAAGGCTCTCCTCT+TGG 0.425312 3_3:+83422992 None:intergenic
CAACTGGAAATACACTTGCT+TGG 0.427953 3_3:-83428194 Msa0478610:CDS
ACTTCACCAAGCATTCTATC+AGG 0.429722 3_3:+83426292 None:intergenic
GCATGGCAGACCGTCTTGAT+TGG 0.433495 3_3:-83426861 Msa0478610:CDS
CCATTGAAATTACATGAATT+GGG 0.433673 3_3:+83425216 None:intergenic
CCATGAAGACCAACTTCAAT+GGG 0.434459 3_3:-83429264 Msa0478610:CDS
CGAAGGCCTTGTAAGTTGTA+AGG 0.434572 3_3:-83422859 Msa0478610:three_prime_UTR
CCCATGAAGACCAACTTCAA+TGG 0.434667 3_3:-83429265 Msa0478610:CDS
CCAAACCTCCCCATTGAAGT+TGG 0.435140 3_3:+83429255 None:intergenic
TTCCTGCAGGTTGCTGTGGA+TGG 0.435191 3_3:-83425467 Msa0478610:intron
CCTCACTGCTAAAGAGGGTT+TGG 0.438233 3_3:+83423263 None:intergenic
CACATGCTATATTATAAGAT+TGG 0.440894 3_3:+83423308 None:intergenic
CCATTACCATTGCAATTGCC+GGG 0.446029 3_3:+83424995 None:intergenic
ACATGAATTGGGACATTGAC+CGG 0.447405 3_3:+83425227 None:intergenic
AACTGGAAATACACTTGCTT+GGG 0.447737 3_3:-83428193 Msa0478610:CDS
TCTCCACTATATGTTAGGAT+TGG 0.449181 3_3:+83426718 None:intergenic
TAGCACCACCAGGGAATAAT+CGG 0.449651 3_3:+83423919 None:intergenic
CTCCACTATATGTTAGGATT+GGG 0.451314 3_3:+83426719 None:intergenic
TTGGGCAGTGGCGTGTGAAC+GGG 0.454811 3_3:-83428175 Msa0478610:CDS
TGCCCAATCCTAACATATAG+TGG 0.458755 3_3:-83426721 Msa0478610:CDS
ACTGGCTTAGAACTGGAAGA+TGG 0.459917 3_3:-83427150 Msa0478610:CDS
AGGGGCAGGGTCAGTGCACC+GGG 0.461677 3_3:-83423237 Msa0478610:CDS
TTACAGAGCTCTGGATATGC+AGG 0.461769 3_3:+83425270 None:intergenic
TGCAAGCAAATACCGCATAA+TGG 0.462299 3_3:+83427295 None:intergenic
GTAACTACAAGACCTACAAC+TGG 0.464325 3_3:-83428210 Msa0478610:CDS
GGATGGAGACAACAGACTTC+GGG 0.466722 3_3:-83423347 Msa0478610:CDS
CACGGTAACCCTCCAATTGT+TGG 0.467549 3_3:-83428780 Msa0478610:CDS
AAGGAAAAGACGGCGTGATC+AGG 0.469846 3_3:-83427827 Msa0478610:intron
AATATACCTTTATTAGCTTG+TGG 0.473813 3_3:+83426670 None:intergenic
AACCGCAAGTTCCCCTTGAC+AGG 0.475667 3_3:+83428437 None:intergenic
GCTGTTCTGGCATGTGTATC+CGG 0.476768 3_3:+83424073 None:intergenic
GGGTCAGAGTTACAGAGCTC+TGG 0.478999 3_3:+83425261 None:intergenic
CCTCGCCCTCACTGCTAAAG+AGG 0.479806 3_3:+83423257 None:intergenic
GGTGGAGCTATTCTGTTCCC+TGG 0.483755 3_3:-83425419 Msa0478610:CDS
CAATGGGGCCGTGCTATAGC+TGG 0.485345 3_3:-83428150 Msa0478610:intron
AGATCTTGTATCCACGGAAC+CGG 0.486965 3_3:+83426945 None:intergenic
GGTTTATTCGGTTACCCCAC+AGG 0.490379 3_3:-83429153 Msa0478610:CDS
GGGTCAGTGCACCGGGTTTG+GGG 0.491122 3_3:-83423230 Msa0478610:CDS
CTTGGGCAGTGGCGTGTGAA+CGG 0.493006 3_3:-83428176 Msa0478610:CDS
CCTCTTTAGCAGTGAGGGCG+AGG 0.494145 3_3:-83423257 Msa0478610:CDS
AAGGGGAACTTGCGGTTAAG+TGG 0.494260 3_3:-83428431 Msa0478610:CDS
TATCATTAACCATTAAAGCC+AGG 0.494474 3_3:+83425401 None:intergenic
CTGGCTTAGAACTGGAAGAT+GGG 0.495863 3_3:-83427149 Msa0478610:CDS
CCCGGCAATTGCAATGGTAA+TGG 0.496952 3_3:-83424995 Msa0478610:CDS
AATGACTTCAGGGTCTCATT+GGG 0.496959 3_3:-83426998 Msa0478610:intron
CAAGTAATGGATGAAAAGCT+TGG 0.497346 3_3:-83427369 Msa0478610:CDS
TGTACGTGGTTCTATGACCC+AGG 0.499143 3_3:-83426116 Msa0478610:CDS
TTAGGGAAATAGAAAGTAGA+GGG 0.501244 3_3:-83422957 Msa0478610:three_prime_UTR
TTGTCCTACCTTTATTCTGA+AGG 0.501780 3_3:+83429105 None:intergenic
AGTCCAAAATCGCTAAAAGA+AGG 0.504088 3_3:+83423100 None:intergenic
TTCAATGGAGATTGTGTCGA+TGG 0.504603 3_3:-83425201 Msa0478610:CDS
TCCAACTGCTGCAGTATGCT+AGG 0.505831 3_3:+83423969 None:intergenic
ACCGGCATCGACTGTTCCAC+TGG 0.505943 3_3:-83424929 Msa0478610:intron
GCCTAGCATACTGCAGCAGT+TGG 0.507515 3_3:-83423970 Msa0478610:CDS
AGCAGTGAGGGCGAGGGGCA+GGG 0.508313 3_3:-83423250 Msa0478610:CDS
GTCCAAAATCGCTAAAAGAA+GGG 0.509247 3_3:+83423101 None:intergenic
TGCAAACTGAGAGACTAGAT+AGG 0.511905 3_3:+83424042 None:intergenic
TCTCTGCCTCAGCAGTCAAA+TGG 0.511963 3_3:+83428018 None:intergenic
TGTCCTACCTTTATTCTGAA+GGG 0.513105 3_3:+83429106 None:intergenic
ATGGCATGTGCCTTTCCAAT+GGG 0.513864 3_3:-83424976 Msa0478610:CDS
TGGTAAGAAGCTTATGAAGC+TGG 0.515469 3_3:-83429919 None:intergenic
CTTACAACTTACAAGGCCTT+CGG 0.515682 3_3:+83422860 None:intergenic
CTTGCTGGACAGGCATACTC+TGG 0.520010 3_3:-83427180 Msa0478610:intron
TATCTAAATTATGATGCTGT+TGG 0.521394 3_3:-83429023 Msa0478610:CDS
AGGATGGAGACAACAGACTT+CGG 0.523433 3_3:-83423348 Msa0478610:CDS
ACCGAATAAACCTTGCGACC+AGG 0.524470 3_3:+83429164 None:intergenic
GGAACCAGGAAGAGAAGTTG+TGG 0.526060 3_3:+83428818 None:intergenic
TGGAAAGTGTGTCCTCGTGC+TGG 0.527251 3_3:-83425440 Msa0478610:CDS
GATTATTCCCTGGTGGTGCT+AGG 0.527545 3_3:-83423917 Msa0478610:CDS
GCTGATAACAACCATTGCCC+TGG 0.527913 3_3:+83426098 None:intergenic
CATTAGGTCAGACTGCTGAC+TGG 0.531529 3_3:-83428484 Msa0478610:CDS
GACAATCTCTGTCAGGGGAG+TGG 0.532484 3_3:+83429000 None:intergenic
TGCACTTCTGAAGATATCTC+AGG 0.532542 3_3:-83428741 Msa0478610:CDS
ACTGTGATGAGGCTGCTAAA+CGG 0.532832 3_3:-83423866 Msa0478610:CDS
CATTGAAGTTGGTCTTCATG+GGG 0.533371 3_3:+83429266 None:intergenic
TTTACATTCACAGATCCCAT+TGG 0.534526 3_3:+83424961 None:intergenic
TTCCGTTGTTCTGACTATGC+CGG 0.536801 3_3:-83424092 Msa0478610:CDS
GTACTGGTAAATGATGTATC+TGG 0.537760 3_3:-83424014 Msa0478610:CDS
CTCTTTAGCAGTGAGGGCGA+GGG 0.538771 3_3:-83423256 Msa0478610:CDS
GGATGAAAAGCTTGGACGGA+TGG 0.541613 3_3:-83427361 Msa0478610:CDS
TCTGACCCAGTATCTGTGTC+CGG 0.541794 3_3:-83425246 Msa0478610:CDS
GAAAAGACATCTTACCCAGC+AGG 0.542174 3_3:+83423839 None:intergenic
ACCAGTGGAACAGTCGATGC+CGG 0.542571 3_3:+83424928 None:intergenic
CTGATGAATGAGATTATGAC+CGG 0.543925 3_3:-83426964 Msa0478610:CDS
TACATATAACAGAGAGGCAG+AGG 0.544261 3_3:-83426749 Msa0478610:CDS
CAACAATCGCCAACAATTGG+AGG 0.544985 3_3:+83428771 None:intergenic
GGTGCAATAATCAGCTAATG+AGG 0.545277 3_3:+83426369 None:intergenic
CTCCCCTTGCAATCTCTGGA+AGG 0.545311 3_3:-83426809 Msa0478610:CDS
TTTAAGTCCTTAGATTTAGG+AGG 0.546056 3_3:-83423073 Msa0478610:three_prime_UTR
AGCAATGCAGCCTTCATGGT+GGG 0.547148 3_3:-83424139 Msa0478610:CDS
GATTGTCAAGCTTTGGCCGA+AGG 0.547826 3_3:-83422876 Msa0478610:three_prime_UTR
GTCCTACCTTTATTCTGAAG+GGG 0.548431 3_3:+83429107 None:intergenic
AATTACCACCGATTATTCCC+TGG 0.549459 3_3:-83423927 Msa0478610:CDS
GAAGGTTACAGAACAAGTAA+TGG 0.552663 3_3:-83427382 Msa0478610:intron
AATATTGTGCCCACTGAGGT+AGG 0.552696 3_3:+83426695 None:intergenic
TATAAGATTGGCATGCGGAA+TGG 0.552911 3_3:+83423320 None:intergenic
TCCCCTTGCAATCTCTGGAA+GGG 0.553022 3_3:-83426808 Msa0478610:CDS
TGAAGGGGCTTCAGTCGACC+AGG 0.553245 3_3:+83429122 None:intergenic
GCCTCATCATTAGTGCGCAC+AGG 0.555711 3_3:-83426142 Msa0478610:CDS
CAATCTTATAATATAGCATG+TGG 0.556156 3_3:-83423307 Msa0478610:CDS
AGGTGTCCCTGATGCCGACT+TGG 0.556403 3_3:-83428241 Msa0478610:CDS
TTGGGGAGATGAAATTGTCG+TGG 0.556577 3_3:-83423213 Msa0478610:CDS
ACTGCAGCAGTTGGAAGAAG+TGG 0.556903 3_3:-83423961 Msa0478610:CDS
GGTTCTATGACCCAGGGCAA+TGG 0.557011 3_3:-83426109 Msa0478610:CDS
TGGCTTAGAACTGGAAGATG+GGG 0.557560 3_3:-83427148 Msa0478610:CDS
ATCCAGAAGTGTGACAAGGA+TGG 0.558279 3_3:-83423364 Msa0478610:CDS
TATTCTGCATGTGGACAAGA+TGG 0.561515 3_3:-83428407 Msa0478610:CDS
ATTGGCTGTTGAGCCTGTCA+AGG 0.562386 3_3:-83428450 Msa0478610:CDS
CGAGCACCTGATAGAATGCT+TGG 0.562397 3_3:-83426298 Msa0478610:CDS
AAATACACTTGCTTGGGCAG+TGG 0.563695 3_3:-83428187 Msa0478610:CDS
TCCTCGCCATTTGACTGCTG+AGG 0.565327 3_3:-83428024 Msa0478610:CDS
GCAATGCAGCCTTCATGGTG+GGG 0.566422 3_3:-83424138 Msa0478610:CDS
GCTCCCTTCCAGAGATTGCA+AGG 0.566663 3_3:+83426805 None:intergenic
TGACTGGTTTAGGAGAGCAT+TGG 0.569656 3_3:-83428468 Msa0478610:CDS
ATCTTATAATATAGCATGTG+GGG 0.571472 3_3:-83423305 Msa0478610:CDS
TTCAATGGGGAGGTTTGGAA+AGG 0.571752 3_3:-83429250 Msa0478610:CDS
TCTTTAGCAGTGAGGGCGAG+GGG 0.572339 3_3:-83423255 Msa0478610:CDS
TGGTTTAGTCGCCTGCGAAG+TGG 0.572977 3_3:-83423193 Msa0478610:CDS
AAAGTGTGTCCTCGTGCTGG+TGG 0.573156 3_3:-83425437 Msa0478610:CDS
CTCGCCCTCACTGCTAAAGA+GGG 0.573172 3_3:+83423258 None:intergenic
ATCATTAACCATTAAAGCCA+GGG 0.573751 3_3:+83425402 None:intergenic
AATAACTTCCTAGCACCACC+AGG 0.574093 3_3:+83423909 None:intergenic
AGCGTGAATGCATGACAACA+CGG 0.574223 3_3:+83427319 None:intergenic
TTTAGGGAAATAGAAAGTAG+AGG 0.577644 3_3:-83422958 Msa0478610:three_prime_UTR
TGAGATTATGACCGGTTCCG+TGG 0.577679 3_3:-83426956 Msa0478610:CDS
TCTTGCCCCGGCAATTGCAA+TGG 0.577775 3_3:-83425001 Msa0478610:CDS
TTGGCTGTTGAGCCTGTCAA+GGG 0.578072 3_3:-83428449 Msa0478610:CDS
CTCTCTTAGAAGACAGTGGA+TGG 0.580262 3_3:-83426900 Msa0478610:CDS
AATCTTATAATATAGCATGT+GGG 0.580462 3_3:-83423306 Msa0478610:CDS
AACTACAGATCTTGTATCCA+CGG 0.582065 3_3:+83426939 None:intergenic
CTACTTCTAGGTTCTTGCCC+CGG 0.582074 3_3:-83425013 Msa0478610:intron
CAATTTCATCTCCCCAAACC+CGG 0.582561 3_3:+83423219 None:intergenic
CTAAAATGAGCGAAGGCGTG+TGG 0.582666 3_3:+83427856 None:intergenic
AACAATCGCCAACAATTGGA+GGG 0.582777 3_3:+83428772 None:intergenic
AAGTCAGAGGAAGTAACTCT+AGG 0.582858 3_3:-83426273 Msa0478610:intron
TCGCTAAAAGAAGGGGCGGA+AGG 0.585334 3_3:+83423109 None:intergenic
CAAACCCTCTTTAGCAGTGA+GGG 0.589072 3_3:-83423262 Msa0478610:CDS
TCCAAAATCGCTAAAAGAAG+GGG 0.591337 3_3:+83423102 None:intergenic
GAGAAAGCGACCTGGTCGCA+AGG 0.592980 3_3:-83429174 Msa0478610:CDS
GAATGTAAAACTGGCTACAC+CGG 0.594335 3_3:-83424947 Msa0478610:CDS
CGACCAGGCTCGTAAACCTG+TGG 0.597355 3_3:+83429137 None:intergenic
GACAGAGATTGTCGAAAAGT+CGG 0.597866 3_3:-83428990 Msa0478610:CDS
AATGGCATGTGCCTTTCCAA+TGG 0.600828 3_3:-83424977 Msa0478610:CDS
CTTGATTGGGGTCGCAACCA+AGG 0.602294 3_3:-83426847 Msa0478610:CDS
TCCTGTGCGCACTAATGATG+AGG 0.604382 3_3:+83426141 None:intergenic
CTCCCTTCCAGAGATTGCAA+GGG 0.604650 3_3:+83426806 None:intergenic
TAAAATGAGCGAAGGCGTGT+GGG 0.605040 3_3:+83427857 None:intergenic
TAATGGATGAAAAGCTTGGA+CGG 0.605604 3_3:-83427365 Msa0478610:CDS
GAACCAGGAAGAGAAGTTGT+GGG 0.607827 3_3:+83428819 None:intergenic
GCGTGAATGCATGACAACAC+GGG 0.608226 3_3:+83427320 None:intergenic
CTCAATCCAGAAGTGTGACA+AGG 0.608986 3_3:-83423368 Msa0478610:CDS
AGGTAACAAATTCAGTACCT+TGG 0.609344 3_3:+83426830 None:intergenic
ATGGCAGACCGTCTTGATTG+GGG 0.610083 3_3:-83426859 Msa0478610:CDS
GCCTCAGCAGTCAAATGGCG+AGG 0.610478 3_3:+83428023 None:intergenic
AGAGTCTCAGAATGATGTGA+AGG 0.610791 3_3:-83429060 Msa0478610:CDS
ATTCACAGATCCCATTGGAA+AGG 0.612632 3_3:+83424966 None:intergenic
TATCACAAACCCCACCATGA+AGG 0.614453 3_3:+83424129 None:intergenic
ATTGACCGGACACAGATACT+GGG 0.616861 3_3:+83425241 None:intergenic
GACCAGGCTCGTAAACCTGT+GGG 0.617423 3_3:+83429138 None:intergenic
TGAGAGACTAGATAGGAGCA+TGG 0.619676 3_3:+83424049 None:intergenic
GTACAAAGCCAATTATAGCA+TGG 0.623088 3_3:-83426878 Msa0478610:CDS
GTACGTGGTTCTATGACCCA+GGG 0.623333 3_3:-83426115 Msa0478610:CDS
TTAGAGATGAAAGGAAAAGA+CGG 0.624641 3_3:-83427837 Msa0478610:CDS
TTTAGCAGCCTCATCACAGT+AGG 0.625549 3_3:+83423869 None:intergenic
CATTACCATTGCAATTGCCG+GGG 0.627248 3_3:+83424996 None:intergenic
CTGATAACAACCATTGCCCT+GGG 0.627806 3_3:+83426099 None:intergenic
CTTGAACAGAGAAAGCGACC+TGG 0.629402 3_3:-83429182 Msa0478610:CDS
TTCATCTCTAAAATGAGCGA+AGG 0.632859 3_3:+83427849 None:intergenic
TTAAGTGGATATTCTGCATG+TGG 0.635362 3_3:-83428416 Msa0478610:CDS
TAGTGGAGACCTACCTCAGT+GGG 0.636935 3_3:-83426704 Msa0478610:CDS
AGAATATACCAGCTATAGCA+CGG 0.637096 3_3:+83428142 None:intergenic
AACACTTCACCTTACGAAGG+CGG 0.638184 3_3:+83428703 None:intergenic
TAGGGAAATAGAAAGTAGAG+GGG 0.641634 3_3:-83422956 Msa0478610:three_prime_UTR
TCTGCATGTGGACAAGATGG+AGG 0.645384 3_3:-83428404 Msa0478610:CDS
TCCCTTCCAGAGATTGCAAG+GGG 0.647167 3_3:+83426807 None:intergenic
ATATGGAGAAAAGAATGAAG+CGG 0.647295 3_3:+83422820 None:intergenic
GCTTCCTCGTGGATATATCG+AGG 0.647865 3_3:-83428375 Msa0478610:CDS
CTTCCTCGTGGATATATCGA+GGG 0.647952 3_3:-83428374 Msa0478610:intron
AAAGAACCAAGTCGGCATCA+GGG 0.648890 3_3:+83428235 None:intergenic
AAAATCGCTAAAAGAAGGGG+CGG 0.652294 3_3:+83423105 None:intergenic
TACAGAGCTCTGGATATGCA+GGG 0.653209 3_3:+83425271 None:intergenic
TGGCAGCACCTACTGTGATG+AGG 0.653700 3_3:-83423877 Msa0478610:CDS
AGCCTGTCAAGGGGAACTTG+CGG 0.656310 3_3:-83428439 Msa0478610:CDS
GGAGGCGTGCAGCTTCCTCG+TGG 0.657724 3_3:-83428386 Msa0478610:CDS
TGGACGGATGGTCAATCGAG+TGG 0.658581 3_3:-83427349 Msa0478610:CDS
CGTGAATGCATGACAACACG+GGG 0.658852 3_3:+83427321 None:intergenic
TTCAGCTACTCTAATACACG+AGG 0.660009 3_3:-83427988 Msa0478610:intron
CACCACCAGGGAATAATCGG+TGG 0.661062 3_3:+83423922 None:intergenic
GGTTGCGACCCCAATCAAGA+CGG 0.662302 3_3:+83426851 None:intergenic
GAAGACCAACTTCAATGGGG+AGG 0.665879 3_3:-83429260 Msa0478610:CDS
TTGGCTCTCTTAGAAGACAG+TGG 0.669013 3_3:-83426904 Msa0478610:CDS
GTGCGCACAGGATTTGTACG+TGG 0.672722 3_3:-83426130 Msa0478610:CDS
GGCTTAGAACTGGAAGATGG+GGG 0.673964 3_3:-83427147 Msa0478610:CDS
CATGAAATCCAATAAAGCAG+CGG 0.673999 3_3:+83425172 None:intergenic
ACATATAACAGAGAGGCAGA+GGG 0.678098 3_3:-83426748 Msa0478610:CDS
TGGCTGTTGAGCCTGTCAAG+GGG 0.681151 3_3:-83428448 Msa0478610:CDS
CTTCCAGAGATTGCAAGGGG+AGG 0.682089 3_3:+83426810 None:intergenic
TACCACCGATTATTCCCTGG+TGG 0.689692 3_3:-83423924 Msa0478610:CDS
AGAATGCTTGGTGAAGTCAG+AGG 0.689914 3_3:-83426286 Msa0478610:CDS
AGAATAGCTCCACCAGCACG+AGG 0.692180 3_3:+83425428 None:intergenic
CCAAACCCTCTTTAGCAGTG+AGG 0.693575 3_3:-83423263 Msa0478610:CDS
CCAGGAAGAGAAGTTGTGGG+AGG 0.693692 3_3:+83428822 None:intergenic
AGTTACCAAAAGAACCAAGT+CGG 0.695935 3_3:+83428227 None:intergenic
GAGCAATGCAGCCTTCATGG+TGG 0.701413 3_3:-83424140 Msa0478610:CDS
ACCAGGCTCGTAAACCTGTG+GGG 0.702041 3_3:+83429139 None:intergenic
GCATTCACGCTACCATTATG+CGG 0.702497 3_3:-83427307 Msa0478610:intron
GAAAACACTTCACCTTACGA+AGG 0.704760 3_3:+83428700 None:intergenic
ATAACTTCCTAGCACCACCA+GGG 0.709601 3_3:+83423910 None:intergenic
ATAGTGGAGACCTACCTCAG+TGG 0.713541 3_3:-83426705 Msa0478610:CDS
ACAATTGGAGGGTTACCGTG+AGG 0.716558 3_3:+83428783 None:intergenic
AGCCCCTTCAGAATAAAGGT+AGG 0.717982 3_3:-83429109 Msa0478610:CDS
ATCCGGCATAGTCAGAACAA+CGG 0.719846 3_3:+83424090 None:intergenic
TATATTATAAGATTGGCATG+CGG 0.730538 3_3:+83423315 None:intergenic
GCGTGTGAACGGGATCAATG+GGG 0.738004 3_3:-83428165 Msa0478610:CDS
TGGCTGTACATATAACAGAG+AGG 0.739592 3_3:-83426755 Msa0478610:CDS
CATGAAGACCAACTTCAATG+GGG 0.747742 3_3:-83429263 Msa0478610:CDS
GGAAAATATTGTGCCCACTG+AGG 0.761834 3_3:+83426691 None:intergenic
GTACCCTCGATATATCCACG+AGG 0.838583 3_3:+83428371 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTTTATTTATTTTTTTGA+GGG - chr3_3:83422807-83422826 Msa0478610:three_prime_UTR 10.0%
!! GTAAATTAAAACAAATTAAA+AGG + chr3_3:83424020-83424039 None:intergenic 10.0%
!!! TTAATTTGTTTTAATTTACT+AGG - chr3_3:83424021-83424040 Msa0478610:CDS 10.0%
!!! TATATAATTAAATTTTCATC+TGG - chr3_3:83426701-83426720 Msa0478610:CDS 10.0%
!!! TTTTTTTTTTTTTTTGTTTG+AGG - chr3_3:83427034-83427053 Msa0478610:intron 10.0%
!! AGAAATCATAAAAAAAATAA+AGG - chr3_3:83428416-83428435 Msa0478610:CDS 10.0%
!! CAAGTATATATATATATATA+TGG + chr3_3:83429893-83429912 None:intergenic 10.0%
!!! GAAGTTTATTTATTTTTTTG+AGG - chr3_3:83422806-83422825 Msa0478610:three_prime_UTR 15.0%
!!! AGTTTATTTATTTTTTTGAG+GGG - chr3_3:83422808-83422827 Msa0478610:three_prime_UTR 15.0%
!!! AAATGGTAAATTTTGAAAAT+TGG - chr3_3:83423022-83423041 Msa0478610:three_prime_UTR 15.0%
!! TAATTTAGATATATCCTAAT+AGG + chr3_3:83423661-83423680 None:intergenic 15.0%
!! AGTGTTTAATATAAATGAAT+AGG - chr3_3:83423742-83423761 Msa0478610:intron 15.0%
!! AGTAAAATTTCATATTGTAT+TGG - chr3_3:83425036-83425055 Msa0478610:intron 15.0%
!!! GGATTATAAAATCTTTTATT+GGG - chr3_3:83425145-83425164 Msa0478610:intron 15.0%
!!! GATTATAAAATCTTTTATTG+GGG - chr3_3:83425146-83425165 Msa0478610:intron 15.0%
!!! ATTATAAAATCTTTTATTGG+GGG - chr3_3:83425147-83425166 Msa0478610:intron 15.0%
!! ACAATTCTTAATATATGTAT+TGG + chr3_3:83425240-83425259 None:intergenic 15.0%
!! ATAATATTATCATTACTTGT+TGG - chr3_3:83425284-83425303 Msa0478610:CDS 15.0%
!! ATATATAGCACTATATATTA+GGG + chr3_3:83426686-83426705 None:intergenic 15.0%
!! TATATATAGCACTATATATT+AGG + chr3_3:83426687-83426706 None:intergenic 15.0%
!!! ATTTTTTTTATGATTTCTCA+GGG + chr3_3:83428414-83428433 None:intergenic 15.0%
!!! TATTTTTTTTATGATTTCTC+AGG + chr3_3:83428415-83428434 None:intergenic 15.0%
!!! TGTTAAATAATTTTGTATGT+AGG - chr3_3:83428452-83428471 Msa0478610:CDS 15.0%
!! AGGAAGTTATTTAATATATT+TGG - chr3_3:83428796-83428815 Msa0478610:CDS 15.0%
!! AGAAATAATAGTTCTTTAAA+AGG - chr3_3:83429533-83429552 Msa0478610:intron 15.0%
!! AAATTGAGAAGAAAAAAAAA+AGG - chr3_3:83429768-83429787 Msa0478610:intron 15.0%
!!! GGGAATAATTGAATTTTATA+TGG - chr3_3:83422828-83422847 Msa0478610:three_prime_UTR 20.0%
!!! AAACAGAATTTTTAAGGTTA+GGG - chr3_3:83422879-83422898 Msa0478610:three_prime_UTR 20.0%
!! AATTTACCATTTACATTTGA+AGG + chr3_3:83423014-83423033 None:intergenic 20.0%
!! AAAAATACTTGATACCTTAT+TGG - chr3_3:83423128-83423147 Msa0478610:exon 20.0%
!!! AAAGTTAAGTGTTTTAATAG+TGG - chr3_3:83423194-83423213 Msa0478610:CDS 20.0%
!!! ATAATCATTCACATAGATTT+TGG - chr3_3:83424152-83424171 Msa0478610:CDS 20.0%
!! TTTGGTTATAAAAATGAGAT+TGG - chr3_3:83424740-83424759 Msa0478610:intron 20.0%
!!! TTTTCTTATAAATTCCTGAA+TGG - chr3_3:83424919-83424938 Msa0478610:intron 20.0%
!! ATGACGATAATAATAACTAT+TGG - chr3_3:83424966-83424985 Msa0478610:CDS 20.0%
!!! TGTCTTTAAAATGTATATCT+AGG - chr3_3:83425123-83425142 Msa0478610:intron 20.0%
!!! GTCTTTAAAATGTATATCTA+GGG - chr3_3:83425124-83425143 Msa0478610:intron 20.0%
!!! GGGATTATAAAATCTTTTAT+TGG - chr3_3:83425144-83425163 Msa0478610:intron 20.0%
!!! TTATAAAATCTTTTATTGGG+GGG - chr3_3:83425148-83425167 Msa0478610:intron 20.0%
!!! TTTTTTTTCTTGTCAAACTA+TGG - chr3_3:83425623-83425642 Msa0478610:intron 20.0%
!! GAAAAATCAAGATATGTAAT+AGG + chr3_3:83426201-83426220 None:intergenic 20.0%
!! TATATAGCACTATATATTAG+GGG + chr3_3:83426685-83426704 None:intergenic 20.0%
!! AAAAAAAATACTTTACTTCC+TGG + chr3_3:83426894-83426913 None:intergenic 20.0%
!!! TTTTTCTTGTGATTTTGATA+AGG - chr3_3:83426957-83426976 Msa0478610:CDS 20.0%
!! ATAACATCAATGAAAGAATT+GGG + chr3_3:83427005-83427024 None:intergenic 20.0%
!! AATAACATCAATGAAAGAAT+TGG + chr3_3:83427006-83427025 None:intergenic 20.0%
!! TTCAATTCTCAATAATTTGA+TGG - chr3_3:83427354-83427373 Msa0478610:CDS 20.0%
!!! TAGAATCTAGTCTTAAAAAT+TGG + chr3_3:83427796-83427815 None:intergenic 20.0%
!! AAACTAGTCATAATTTAACA+AGG + chr3_3:83427965-83427984 None:intergenic 20.0%
!! AATCTTATAATATAGCATGT+GGG - chr3_3:83429387-83429406 Msa0478610:intron 20.0%
!! TAATTTAAGTCCTTAGATTT+AGG - chr3_3:83429617-83429636 Msa0478610:intron 20.0%
!!! CAATTTTTCCTAAACAATTT+TGG + chr3_3:83429658-83429677 None:intergenic 20.0%
!! CAAAATTGTTTAGGAAAAAT+TGG - chr3_3:83429656-83429675 Msa0478610:intron 20.0%
!!! ATTTCAATTTTCTCTACAAA+AGG + chr3_3:83429716-83429735 None:intergenic 20.0%
!! TGTAGAGAAAATTGAAATTT+AGG - chr3_3:83429718-83429737 Msa0478610:intron 20.0%
!! GTAGAGAAAATTGAAATTTA+GGG - chr3_3:83429719-83429738 Msa0478610:intron 20.0%
! AACCTTAAAAATTCTGTTTC+AGG + chr3_3:83422878-83422897 None:intergenic 25.0%
!!! GAAACAGAATTTTTAAGGTT+AGG - chr3_3:83422878-83422897 Msa0478610:three_prime_UTR 25.0%
!! TGAAAATTGGCTTATAGATT+TGG - chr3_3:83423035-83423054 Msa0478610:three_prime_UTR 25.0%
!! GCTAGTATTAAGGTAAATTT+TGG - chr3_3:83423085-83423104 Msa0478610:three_prime_UTR 25.0%
!!! GTATTAAGGTAAATTTTGGT+AGG - chr3_3:83423089-83423108 Msa0478610:three_prime_UTR 25.0%
!!! CTGTTTTTGTTCCTTTTTTT+GGG - chr3_3:83423244-83423263 Msa0478610:CDS 25.0%
!!! TGTTTTTGTTCCTTTTTTTG+GGG - chr3_3:83423245-83423264 Msa0478610:CDS 25.0%
! TATCTAAATTATGATGCTGT+TGG - chr3_3:83423670-83423689 Msa0478610:intron 25.0%
!!! ATATTTCTAGCCATAACATT+TGG - chr3_3:83423780-83423799 Msa0478610:intron 25.0%
!!! TATTTCTAGCCATAACATTT+GGG - chr3_3:83423781-83423800 Msa0478610:intron 25.0%
!!! TTTTATTTTTATGAGCAGCT+TGG - chr3_3:83423844-83423863 Msa0478610:intron 25.0%
!!! TGTAGGTATTTTTATTTTGC+AGG - chr3_3:83424631-83424650 Msa0478610:intron 25.0%
!!! ACGAGGTTTGTTATATTTTT+TGG - chr3_3:83424722-83424741 Msa0478610:intron 25.0%
! AGACAAACATTTAATTGTTC+TGG - chr3_3:83425069-83425088 Msa0478610:intron 25.0%
! GACAAACATTTAATTGTTCT+GGG - chr3_3:83425070-83425089 Msa0478610:intron 25.0%
! ACAAACATTTAATTGTTCTG+GGG - chr3_3:83425071-83425090 Msa0478610:intron 25.0%
! GAACTATACAGAAATTTCAT+AGG - chr3_3:83425183-83425202 Msa0478610:CDS 25.0%
! TTCATAGGTACTTATTTAAG+CGG - chr3_3:83425198-83425217 Msa0478610:CDS 25.0%
!! GTTTACTGTTTTCATACTTA+AGG - chr3_3:83425453-83425472 Msa0478610:CDS 25.0%
!!! CATTTGTTGAATCTTTTGAA+GGG + chr3_3:83425481-83425500 None:intergenic 25.0%
!!! TCATTTGTTGAATCTTTTGA+AGG + chr3_3:83425482-83425501 None:intergenic 25.0%
!! TATTTTCCACAAGCTAATAA+AGG - chr3_3:83426017-83426036 Msa0478610:intron 25.0%
!! AATATACCTTTATTAGCTTG+TGG + chr3_3:83426026-83426045 None:intergenic 25.0%
! ATGTATAAACAGTTCTTTAG+AGG - chr3_3:83426622-83426641 Msa0478610:intron 25.0%
! TAAACATCGTATTAATTCCA+CGG + chr3_3:83426831-83426850 None:intergenic 25.0%
! GAAATACAAGCTTAAGAAAA+AGG + chr3_3:83427143-83427162 None:intergenic 25.0%
!!! CTCATTCATTTTTGTGATAA+AGG + chr3_3:83427195-83427214 None:intergenic 25.0%
! CTTTATCACAAAAATGAATG+AGG - chr3_3:83427193-83427212 Msa0478610:intron 25.0%
!!! CTCTTCATTTTCGTTTTTAT+AGG - chr3_3:83427387-83427406 Msa0478610:intron 25.0%
! CCATTGAAATTACATGAATT+GGG + chr3_3:83427480-83427499 None:intergenic 25.0%
! TCCATTGAAATTACATGAAT+TGG + chr3_3:83427481-83427500 None:intergenic 25.0%
! ATACGTAAGTTATAGCATAA+AGG + chr3_3:83427583-83427602 None:intergenic 25.0%
! AACAAGCACAAAAGAAAAAA+AGG + chr3_3:83427875-83427894 None:intergenic 25.0%
!! ATCTAAAGTAATAGGATATG+TGG - chr3_3:83428046-83428065 Msa0478610:intron 25.0%
!! TCTAAAGTAATAGGATATGT+GGG - chr3_3:83428047-83428066 Msa0478610:intron 25.0%
! ATTGAGCTTAATTATCCTAA+AGG + chr3_3:83428146-83428165 None:intergenic 25.0%
! TTGTGAACAAACAAAATGAA+AGG + chr3_3:83428208-83428227 None:intergenic 25.0%
!!! TTCATTTTGTTTGTTCACAA+TGG - chr3_3:83428208-83428227 Msa0478610:CDS 25.0%
! TATATTATAAGATTGGCATG+CGG + chr3_3:83429381-83429400 None:intergenic 25.0%
! CACATGCTATATTATAAGAT+TGG + chr3_3:83429388-83429407 None:intergenic 25.0%
! CAATCTTATAATATAGCATG+TGG - chr3_3:83429386-83429405 Msa0478610:intron 25.0%
! ATCTTATAATATAGCATGTG+GGG - chr3_3:83429388-83429407 Msa0478610:intron 25.0%
! TTTCTCATCCAAAATTGTTT+AGG - chr3_3:83429647-83429666 Msa0478610:intron 25.0%
!! TTTTAACCTTACAACTTACA+AGG + chr3_3:83429843-83429862 None:intergenic 25.0%
! GTCCTGAAACAGAATTTTTA+AGG - chr3_3:83422873-83422892 Msa0478610:three_prime_UTR 30.0%
TTTCTACCTGAAAACTTAAG+TGG - chr3_3:83422958-83422977 Msa0478610:three_prime_UTR 30.0%
TTACCTTAATACTAGCTCAT+CGG + chr3_3:83423081-83423100 None:intergenic 30.0%
TGATACCTTATTGGAAAGAT+AGG - chr3_3:83423137-83423156 Msa0478610:CDS 30.0%
CTATACCTATCTTTCCAATA+AGG + chr3_3:83423145-83423164 None:intergenic 30.0%
CTTATTGGAAAGATAGGTAT+AGG - chr3_3:83423143-83423162 Msa0478610:CDS 30.0%
AAAAAGGAACAAAAACAGGA+AGG + chr3_3:83423242-83423261 None:intergenic 30.0%
CCAAAAAAAGGAACAAAAAC+AGG + chr3_3:83423246-83423265 None:intergenic 30.0%
!!! CCTGTTTTTGTTCCTTTTTT+TGG - chr3_3:83423243-83423262 Msa0478610:CDS 30.0%
!! TAGAACATCGTTGTTTCTTA+AGG - chr3_3:83423270-83423289 Msa0478610:CDS 30.0%
TGTGCAGATCATATTGATAT+TGG - chr3_3:83423378-83423397 Msa0478610:intron 30.0%
CATATTGATATTGGCATCTT+TGG - chr3_3:83423387-83423406 Msa0478610:intron 30.0%
TGAGATATTCCCAAATGTTA+TGG + chr3_3:83423793-83423812 None:intergenic 30.0%
AACAGCTTATTACATCTCTT+TGG - chr3_3:83424092-83424111 Msa0478610:CDS 30.0%
ACAGCTTATTACATCTCTTT+GGG - chr3_3:83424093-83424112 Msa0478610:CDS 30.0%
CTAGAAACATATGTTTGTAG+AGG - chr3_3:83424572-83424591 Msa0478610:intron 30.0%
TATAAAAATGAGATTGGAGC+AGG - chr3_3:83424746-83424765 Msa0478610:intron 30.0%
ATAAAAATGAGATTGGAGCA+GGG - chr3_3:83424747-83424766 Msa0478610:intron 30.0%
TTAGAGATGAAAGGAAAAGA+CGG - chr3_3:83424856-83424875 Msa0478610:intron 30.0%
TGAGCAAAAATATTCCATTC+AGG + chr3_3:83424936-83424955 None:intergenic 30.0%
TGCATGTCATATACTTTCAA+TGG - chr3_3:83425427-83425446 Msa0478610:CDS 30.0%
!!! AAATTTTACTGGCTTAGAAC+TGG - chr3_3:83425536-83425555 Msa0478610:intron 30.0%
! AGAGTTTTCTAAATGACTTC+AGG - chr3_3:83425684-83425703 Msa0478610:intron 30.0%
! GAGTTTTCTAAATGACTTCA+GGG - chr3_3:83425685-83425704 Msa0478610:intron 30.0%
TGTAGTTTCAAAAATGACGT+TGG - chr3_3:83425770-83425789 Msa0478610:intron 30.0%
GAGATAACATAACAGAGAAA+AGG + chr3_3:83426090-83426109 None:intergenic 30.0%
!!! TTGCCAACTGTTATTTCTTT+TGG - chr3_3:83426515-83426534 Msa0478610:intron 30.0%
CATCCAAAAGAAATAACAGT+TGG + chr3_3:83426521-83426540 None:intergenic 30.0%
! TAAACAGTTCTTTAGAGGTA+TGG - chr3_3:83426627-83426646 Msa0478610:intron 30.0%
ATGTACATTCCATTAATTCC+AGG - chr3_3:83426873-83426892 Msa0478610:CDS 30.0%
ACTTTACTTCCTGGAATTAA+TGG + chr3_3:83426885-83426904 None:intergenic 30.0%
TTCCTTCATTTAGATTTGAG+CGG - chr3_3:83427102-83427121 Msa0478610:intron 30.0%
ATCATTAACCATTAAAGCCA+GGG + chr3_3:83427294-83427313 None:intergenic 30.0%
TATCATTAACCATTAAAGCC+AGG + chr3_3:83427295-83427314 None:intergenic 30.0%
CCCAATTCATGTAATTTCAA+TGG - chr3_3:83427477-83427496 Msa0478610:intron 30.0%
GTAAGTTATAGCATAAAGGT+GGG + chr3_3:83427579-83427598 None:intergenic 30.0%
AAGAACCTAGAAGTAGTTAA+GGG + chr3_3:83427676-83427695 None:intergenic 30.0%
GTCATAATTTAACAAGGCAA+GGG + chr3_3:83427959-83427978 None:intergenic 30.0%
AGTCATAATTTAACAAGGCA+AGG + chr3_3:83427960-83427979 None:intergenic 30.0%
! TGCAATTCCTTGTTATAATC+AGG + chr3_3:83428027-83428046 None:intergenic 30.0%
! GGAATTGCATCTAAAGTAAT+AGG - chr3_3:83428038-83428057 Msa0478610:CDS 30.0%
CTAAAGTAATAGGATATGTG+GGG - chr3_3:83428048-83428067 Msa0478610:intron 30.0%
!! TTTCAGGTTAAAGCATGAAT+AGG + chr3_3:83428927-83428946 None:intergenic 30.0%
! TTCCTATTTTCATTCCTACT+TGG - chr3_3:83428981-83429000 Msa0478610:CDS 30.0%
TTGTAATGTATAGACCAAGT+AGG + chr3_3:83428998-83429017 None:intergenic 30.0%
GAATATCTAACCGACAAAAT+GGG + chr3_3:83429066-83429085 None:intergenic 30.0%
TGAATATCTAACCGACAAAA+TGG + chr3_3:83429067-83429086 None:intergenic 30.0%
AAAGCAGTAGGATTATTTCA+TGG + chr3_3:83429109-83429128 None:intergenic 30.0%
AAAATCAGTCTCATGTTCTT+TGG + chr3_3:83429202-83429221 None:intergenic 30.0%
TTTAGATATTAGAGCACAGT+TGG - chr3_3:83429256-83429275 Msa0478610:CDS 30.0%
AAGGAATGTCTGTAAGATAT+AGG - chr3_3:83429552-83429571 Msa0478610:intron 30.0%
TTTAAGTCCTTAGATTTAGG+AGG - chr3_3:83429620-83429639 Msa0478610:intron 30.0%
TTTAGGGAAATAGAAAGTAG+AGG - chr3_3:83429735-83429754 Msa0478610:intron 30.0%
TTAGGGAAATAGAAAGTAGA+GGG - chr3_3:83429736-83429755 Msa0478610:intron 30.0%
ATATGGAGAAAAGAATGAAG+CGG + chr3_3:83429876-83429895 None:intergenic 30.0%
! CAGTTTCCACTTAAGTTTTC+AGG + chr3_3:83422967-83422986 None:intergenic 35.0%
! AACTGTTCAACTAGCTTCTT+TGG - chr3_3:83422982-83423001 Msa0478610:three_prime_UTR 35.0%
CGGTTACCTTCAAATGTAAA+TGG - chr3_3:83423005-83423024 Msa0478610:three_prime_UTR 35.0%
!! ATAGATTTGGCTCTAGATAG+TGG - chr3_3:83423048-83423067 Msa0478610:three_prime_UTR 35.0%
ATGTTCTACACCCCAAAAAA+AGG + chr3_3:83423258-83423277 None:intergenic 35.0%
ACACTATCGTTACTCAAGTT+GGG - chr3_3:83423329-83423348 Msa0478610:CDS 35.0%
TGTCCTACCTTTATTCTGAA+GGG + chr3_3:83423590-83423609 None:intergenic 35.0%
TTGTCCTACCTTTATTCTGA+AGG + chr3_3:83423591-83423610 None:intergenic 35.0%
ATGATGTGAAGGAACCTATT+AGG - chr3_3:83423644-83423663 Msa0478610:intron 35.0%
! TAAACTTGATGACTTACTGC+AGG - chr3_3:83424186-83424205 Msa0478610:intron 35.0%
TTAAGTGGATATTCTGCATG+TGG - chr3_3:83424277-83424296 Msa0478610:intron 35.0%
AGTTACCAAAAGAACCAAGT+CGG + chr3_3:83424469-83424488 None:intergenic 35.0%
AACTGGAAATACACTTGCTT+GGG - chr3_3:83424500-83424519 Msa0478610:intron 35.0%
AGAATATACCAGCTATAGCA+CGG + chr3_3:83424554-83424573 None:intergenic 35.0%
ATCGCTTTCATTTCGCATTT+GGG - chr3_3:83424597-83424616 Msa0478610:intron 35.0%
TAAAAATGAGATTGGAGCAG+GGG - chr3_3:83424748-83424767 Msa0478610:intron 35.0%
! CTTCATGTTTGACCTTTTTC+AGG - chr3_3:83424791-83424810 Msa0478610:intron 35.0%
GAACATGCATAACCTGAAAA+AGG + chr3_3:83424806-83424825 None:intergenic 35.0%
!! TTTCAGGTTATGCATGTTCT+TGG - chr3_3:83424807-83424826 Msa0478610:intron 35.0%
!! TTCATCTCTAAAATGAGCGA+AGG + chr3_3:83424847-83424866 None:intergenic 35.0%
!! TCGCTCATTTTAGAGATGAA+AGG - chr3_3:83424847-83424866 Msa0478610:intron 35.0%
CACTTCATTTCTCAGTTCTA+AGG + chr3_3:83424998-83425017 None:intergenic 35.0%
!! CATTTAATTGTTCTGGGGAA+TGG - chr3_3:83425076-83425095 Msa0478610:intron 35.0%
! TCATTACTTGTTGGAACTGA+AGG - chr3_3:83425293-83425312 Msa0478610:intron 35.0%
GAAGGTTACAGAACAAGTAA+TGG - chr3_3:83425311-83425330 Msa0478610:intron 35.0%
!! CAAGTAATGGATGAAAAGCT+TGG - chr3_3:83425324-83425343 Msa0478610:intron 35.0%
! TAATGGATGAAAAGCTTGGA+CGG - chr3_3:83425328-83425347 Msa0478610:intron 35.0%
! ATGACTAATTAGTGACTTGC+TGG - chr3_3:83425498-83425517 Msa0478610:intron 35.0%
!! GCATACTCTGGAAATTTTAC+TGG - chr3_3:83425525-83425544 Msa0478610:intron 35.0%
TACCAAAGCAACACTCAATA+TGG - chr3_3:83425655-83425674 Msa0478610:intron 35.0%
!! AACCATATTGAGTGTTGCTT+TGG + chr3_3:83425660-83425679 None:intergenic 35.0%
CTGATGAATGAGATTATGAC+CGG - chr3_3:83425729-83425748 Msa0478610:intron 35.0%
AACTACAGATCTTGTATCCA+CGG + chr3_3:83425757-83425776 None:intergenic 35.0%
GTACAAAGCCAATTATAGCA+TGG - chr3_3:83425815-83425834 Msa0478610:intron 35.0%
AGGTAACAAATTCAGTACCT+TGG + chr3_3:83425866-83425885 None:intergenic 35.0%
TGCAACACAACACAATATTC+TGG - chr3_3:83425918-83425937 Msa0478610:intron 35.0%
CTCCACTATATGTTAGGATT+GGG + chr3_3:83425977-83425996 None:intergenic 35.0%
TCTCCACTATATGTTAGGAT+TGG + chr3_3:83425978-83425997 None:intergenic 35.0%
AACAATGAGTAGTGACAAGA+GGG + chr3_3:83426246-83426265 None:intergenic 35.0%
! GTTCACACGAAATTGTGTTT+TGG - chr3_3:83426263-83426282 Msa0478610:intron 35.0%
ATCAGAGTACGCAACAAAAT+AGG + chr3_3:83426348-83426367 None:intergenic 35.0%
! TATTTTGTTGCGTACTCTGA+TGG - chr3_3:83426347-83426366 Msa0478610:CDS 35.0%
AAAGCAAATGTAAAGCAGTC+TGG + chr3_3:83426472-83426491 None:intergenic 35.0%
! TTGCTTTATTGACAACAAGC+AGG - chr3_3:83426485-83426504 Msa0478610:intron 35.0%
!!! CTGTTATTTCTTTTGGATGC+AGG - chr3_3:83426522-83426541 Msa0478610:intron 35.0%
! AGTTCTTTAGAGGTATGGTT+TGG - chr3_3:83426632-83426651 Msa0478610:intron 35.0%
TTTAGCAACCATGTTTGAGT+AGG - chr3_3:83427075-83427094 Msa0478610:intron 35.0%
! GGAATTTTCCTACTCAAACA+TGG + chr3_3:83427086-83427105 None:intergenic 35.0%
GATAAAGGAAAAAGAAGCGA+AGG + chr3_3:83427180-83427199 None:intergenic 35.0%
CATGAAATCCAATAAAGCAG+CGG + chr3_3:83427524-83427543 None:intergenic 35.0%
CGTAAGTTATAGCATAAAGG+TGG + chr3_3:83427580-83427599 None:intergenic 35.0%
!!! AGGGAAGGCATTTTTAGAAA+AGG + chr3_3:83427657-83427676 None:intergenic 35.0%
CAAGAACCTAGAAGTAGTTA+AGG + chr3_3:83427677-83427696 None:intergenic 35.0%
TTTACATTCACAGATCCCAT+TGG + chr3_3:83427735-83427754 None:intergenic 35.0%
TATAAGACGTCCTCATTTCT+GGG - chr3_3:83427843-83427862 Msa0478610:CDS 35.0%
CTTGTTTCGTTCTATCTTGT+GGG - chr3_3:83427889-83427908 Msa0478610:intron 35.0%
! TTGATAATACGTTTGAGTGC+TGG - chr3_3:83428116-83428135 Msa0478610:intron 35.0%
TGATAATACGTTTGAGTGCT+GGG - chr3_3:83428117-83428136 Msa0478610:intron 35.0%
CAATCACTTTCATGTGATTG+AGG - chr3_3:83428162-83428181 Msa0478610:CDS 35.0%
!! TGGTGGTTGACTTTTCTTTT+GGG + chr3_3:83428271-83428290 None:intergenic 35.0%
!! TTGGTGGTTGACTTTTCTTT+TGG + chr3_3:83428272-83428291 None:intergenic 35.0%
AAAGAAAAGTCAACCACCAA+TGG - chr3_3:83428272-83428291 Msa0478610:intron 35.0%
AAGAAAAGTCAACCACCAAT+GGG - chr3_3:83428273-83428292 Msa0478610:intron 35.0%
AAACTACAAGTGGTGTCTTT+AGG + chr3_3:83428315-83428334 None:intergenic 35.0%
! AAAGACACCACTTGTAGTTT+TGG - chr3_3:83428315-83428334 Msa0478610:intron 35.0%
! AAGACACCACTTGTAGTTTT+GGG - chr3_3:83428316-83428335 Msa0478610:intron 35.0%
!! TGTATTGATTCATGCCTGAA+TGG - chr3_3:83428350-83428369 Msa0478610:intron 35.0%
GTTCTTGCAGAAACATGAAT+TGG - chr3_3:83428490-83428509 Msa0478610:intron 35.0%
CTCAGTTTGCAAAAATGTAC+TGG - chr3_3:83428663-83428682 Msa0478610:intron 35.0%
! GTACTGGTAAATGATGTATC+TGG - chr3_3:83428679-83428698 Msa0478610:intron 35.0%
TGATCGCAAAACAGAATTTC+AGG + chr3_3:83428943-83428962 None:intergenic 35.0%
GACCAAGTAGGAATGAAAAT+AGG + chr3_3:83428986-83429005 None:intergenic 35.0%
! TAGTGTTAGTCCCATTTTGT+CGG - chr3_3:83429053-83429072 Msa0478610:CDS 35.0%
! TGTCGGTTAGATATTCAATG+AGG - chr3_3:83429070-83429089 Msa0478610:CDS 35.0%
! AACTTGACTTGAAAAGCAGT+AGG + chr3_3:83429121-83429140 None:intergenic 35.0%
TCCAAAATCGCTAAAAGAAG+GGG + chr3_3:83429594-83429613 None:intergenic 35.0%
GTCCAAAATCGCTAAAAGAA+GGG + chr3_3:83429595-83429614 None:intergenic 35.0%
AGTCCAAAATCGCTAAAAGA+AGG + chr3_3:83429596-83429615 None:intergenic 35.0%
AAAGCAACCTCCTAAATCTA+AGG + chr3_3:83429630-83429649 None:intergenic 35.0%
ATTGGATGAGATTGCAGATT+TGG - chr3_3:83429674-83429693 Msa0478610:intron 35.0%
TAGGGAAATAGAAAGTAGAG+GGG - chr3_3:83429737-83429756 Msa0478610:intron 35.0%
ATGATACGATTGTCAAGCTT+TGG - chr3_3:83429810-83429829 Msa0478610:intron 35.0%
! TGTTCAACTAGCTTCTTTGG+CGG - chr3_3:83422985-83423004 Msa0478610:three_prime_UTR 40.0%
!! AGGTAAATTTTGGTAGGACC+CGG - chr3_3:83423095-83423114 Msa0478610:three_prime_UTR 40.0%
! AGTATTTTTCCCCCCTTTTC+CGG + chr3_3:83423117-83423136 None:intergenic 40.0%
GACACTATCGTTACTCAAGT+TGG - chr3_3:83423328-83423347 Msa0478610:CDS 40.0%
!! CATTGAAGTTGGTCTTCATG+GGG + chr3_3:83423430-83423449 None:intergenic 40.0%
!! CCATTGAAGTTGGTCTTCAT+GGG + chr3_3:83423431-83423450 None:intergenic 40.0%
CCATGAAGACCAACTTCAAT+GGG - chr3_3:83423429-83423448 Msa0478610:intron 40.0%
CATGAAGACCAACTTCAATG+GGG - chr3_3:83423430-83423449 Msa0478610:intron 40.0%
GCTTTCTCTGTTCAAGAATC+TGG + chr3_3:83423507-83423526 None:intergenic 40.0%
! GTCCTACCTTTATTCTGAAG+GGG + chr3_3:83423589-83423608 None:intergenic 40.0%
AGAGTCTCAGAATGATGTGA+AGG - chr3_3:83423633-83423652 Msa0478610:intron 40.0%
! TTTTCGACAATCTCTGTCAG+GGG + chr3_3:83423701-83423720 None:intergenic 40.0%
! CTTTTCGACAATCTCTGTCA+GGG + chr3_3:83423702-83423721 None:intergenic 40.0%
! ACTTTTCGACAATCTCTGTC+AGG + chr3_3:83423703-83423722 None:intergenic 40.0%
GACAGAGATTGTCGAAAAGT+CGG - chr3_3:83423703-83423722 Msa0478610:intron 40.0%
TACCGTGAGGATTGCAAAAA+GGG + chr3_3:83423900-83423919 None:intergenic 40.0%
TTACCGTGAGGATTGCAAAA+AGG + chr3_3:83423901-83423920 None:intergenic 40.0%
AACAATCGCCAACAATTGGA+GGG + chr3_3:83423924-83423943 None:intergenic 40.0%
TACCAACAATCGCCAACAAT+TGG + chr3_3:83423928-83423947 None:intergenic 40.0%
! TGCACTTCTGAAGATATCTC+AGG - chr3_3:83423952-83423971 Msa0478610:CDS 40.0%
GAAAACACTTCACCTTACGA+AGG + chr3_3:83423996-83424015 None:intergenic 40.0%
! TTTTCCCGTGGGAGAATTAT+TGG - chr3_3:83424053-83424072 Msa0478610:CDS 40.0%
TTTCCCGTGGGAGAATTATT+GGG - chr3_3:83424054-83424073 Msa0478610:CDS 40.0%
TATTACATCTCTTTGGGCAG+TGG - chr3_3:83424099-83424118 Msa0478610:CDS 40.0%
ATTACATCTCTTTGGGCAGT+GGG - chr3_3:83424100-83424119 Msa0478610:CDS 40.0%
TATTCTGCATGTGGACAAGA+TGG - chr3_3:83424286-83424305 Msa0478610:intron 40.0%
GTAACTACAAGACCTACAAC+TGG - chr3_3:83424483-83424502 Msa0478610:intron 40.0%
GCAAGTGTATTTCCAGTTGT+AGG + chr3_3:83424498-83424517 None:intergenic 40.0%
CAACTGGAAATACACTTGCT+TGG - chr3_3:83424499-83424518 Msa0478610:intron 40.0%
GATCGCTTTCATTTCGCATT+TGG - chr3_3:83424596-83424615 Msa0478610:intron 40.0%
TTCAGCTACTCTAATACACG+AGG - chr3_3:83424705-83424724 Msa0478610:intron 40.0%
TGCAAGCAAATACCGCATAA+TGG + chr3_3:83425401-83425420 None:intergenic 40.0%
!! TAATTAGTGACTTGCTGGAC+AGG - chr3_3:83425503-83425522 Msa0478610:intron 40.0%
AAATGACTTCAGGGTCTCAT+TGG - chr3_3:83425694-83425713 Msa0478610:intron 40.0%
AATGACTTCAGGGTCTCATT+GGG - chr3_3:83425695-83425714 Msa0478610:intron 40.0%
TGGCTGTACATATAACAGAG+AGG - chr3_3:83425938-83425957 Msa0478610:intron 40.0%
TACATATAACAGAGAGGCAG+AGG - chr3_3:83425944-83425963 Msa0478610:intron 40.0%
ACATATAACAGAGAGGCAGA+GGG - chr3_3:83425945-83425964 Msa0478610:intron 40.0%
TGCCCAATCCTAACATATAG+TGG - chr3_3:83425972-83425991 Msa0478610:intron 40.0%
GTAGGTCTCCACTATATGTT+AGG + chr3_3:83425983-83426002 None:intergenic 40.0%
TCAATCAGAATACAGTAGCG+TGG + chr3_3:83426155-83426174 None:intergenic 40.0%
GAACAATGAGTAGTGACAAG+AGG + chr3_3:83426247-83426266 None:intergenic 40.0%
!!! ACACGAAATTGTGTTTTGGC+TGG - chr3_3:83426267-83426286 Msa0478610:intron 40.0%
GGTGCAATAATCAGCTAATG+AGG + chr3_3:83426327-83426346 None:intergenic 40.0%
ACTTCACCAAGCATTCTATC+AGG + chr3_3:83426404-83426423 None:intergenic 40.0%
AAGTCAGAGGAAGTAACTCT+AGG - chr3_3:83426420-83426439 Msa0478610:intron 40.0%
! TTCTTTTGGATGCAGGTGTA+TGG - chr3_3:83426529-83426548 Msa0478610:intron 40.0%
CGTATTAATTCCACGGAGTA+GGG + chr3_3:83426824-83426843 None:intergenic 40.0%
TCGTATTAATTCCACGGAGT+AGG + chr3_3:83426825-83426844 None:intergenic 40.0%
AGAATTGGGAGCAATAGTCA+TGG + chr3_3:83426991-83427010 None:intergenic 40.0%
AGCCGCTCAAATCTAAATGA+AGG + chr3_3:83427107-83427126 None:intergenic 40.0%
!! ATTCTGTTCCCTGGCTTTAA+TGG - chr3_3:83427283-83427302 Msa0478610:intron 40.0%
ACATGAATTGGGACATTGAC+CGG + chr3_3:83427469-83427488 None:intergenic 40.0%
TTCAATGGAGATTGTGTCGA+TGG - chr3_3:83427492-83427511 Msa0478610:intron 40.0%
! CGCTGCTTTATTGGATTTCA+TGG - chr3_3:83427522-83427541 Msa0478610:intron 40.0%
ACCTAGAAGTAGTTAAGGGA+AGG + chr3_3:83427672-83427691 None:intergenic 40.0%
ATTCACAGATCCCATTGGAA+AGG + chr3_3:83427730-83427749 None:intergenic 40.0%
GGGATCTGTGAATGTAAAAC+TGG - chr3_3:83427737-83427756 Msa0478610:intron 40.0%
GAATGTAAAACTGGCTACAC+CGG - chr3_3:83427746-83427765 Msa0478610:intron 40.0%
GTATAAGACGTCCTCATTTC+TGG - chr3_3:83427842-83427861 Msa0478610:CDS 40.0%
GCTTGTTTCGTTCTATCTTG+TGG - chr3_3:83427888-83427907 Msa0478610:intron 40.0%
TTTCGTTCTATCTTGTGGGT+TGG - chr3_3:83427893-83427912 Msa0478610:intron 40.0%
TTCGTTCTATCTTGTGGGTT+GGG - chr3_3:83427894-83427913 Msa0478610:intron 40.0%
! CCTTGTTATAATCAGGCATG+AGG + chr3_3:83428020-83428039 None:intergenic 40.0%
CCTCATGCCTGATTATAACA+AGG - chr3_3:83428017-83428036 Msa0478610:CDS 40.0%
ATGTAACCCAGTATGAGTGT+TGG - chr3_3:83428088-83428107 Msa0478610:intron 40.0%
AGTACTCCAACACTCATACT+GGG + chr3_3:83428097-83428116 None:intergenic 40.0%
AAGTACTCCAACACTCATAC+TGG + chr3_3:83428098-83428117 None:intergenic 40.0%
! GATAATACGTTTGAGTGCTG+GGG - chr3_3:83428118-83428137 Msa0478610:intron 40.0%
!! AGACACCACTTGTAGTTTTG+GGG - chr3_3:83428317-83428336 Msa0478610:intron 40.0%
! GATTCATGCCTGAATGGATT+AGG - chr3_3:83428356-83428375 Msa0478610:intron 40.0%
TGCAAACTGAGAGACTAGAT+AGG + chr3_3:83428654-83428673 None:intergenic 40.0%
GGGAATAATCGGTGGTAATT+TGG + chr3_3:83428766-83428785 None:intergenic 40.0%
! AATTACCACCGATTATTCCC+TGG - chr3_3:83428766-83428785 Msa0478610:CDS 40.0%
AAAAAACCGTGGTAGGACTA+GGG + chr3_3:83429177-83429196 None:intergenic 40.0%
TTTGGTCAAAAAACCGTGGT+AGG + chr3_3:83429184-83429203 None:intergenic 40.0%
GTTCTTTGGTCAAAAAACCG+TGG + chr3_3:83429188-83429207 None:intergenic 40.0%
GCCTATTTGTCTGAAGACTT+CGG - chr3_3:83429286-83429305 Msa0478610:CDS 40.0%
TATAAGATTGGCATGCGGAA+TGG + chr3_3:83429376-83429395 None:intergenic 40.0%
TCAAAGAAAAACCACTTCGC+AGG + chr3_3:83429514-83429533 None:intergenic 40.0%
AAAATCGCTAAAAGAAGGGG+CGG + chr3_3:83429591-83429610 None:intergenic 40.0%
!!! TGCAGATTTGGTTTTCCAAG+AGG - chr3_3:83429686-83429705 Msa0478610:intron 40.0%
CTTACAACTTACAAGGCCTT+CGG + chr3_3:83429836-83429855 None:intergenic 40.0%
!!! GGGTTTTGTTCTGAGAGCAA+TGG - chr3_3:83422899-83422918 Msa0478610:three_prime_UTR 45.0%
!! GATTTGGCTCTAGATAGTGG+TGG - chr3_3:83423051-83423070 Msa0478610:three_prime_UTR 45.0%
CCTTAATACTAGCTCATCGG+AGG + chr3_3:83423078-83423097 None:intergenic 45.0%
CCTCCGATGAGCTAGTATTA+AGG - chr3_3:83423075-83423094 Msa0478610:three_prime_UTR 45.0%
!! ATTTTGGTAGGACCCGGAAA+AGG - chr3_3:83423101-83423120 Msa0478610:three_prime_UTR 45.0%
! TTTTGGTAGGACCCGGAAAA+GGG - chr3_3:83423102-83423121 Msa0478610:three_prime_UTR 45.0%
! GTATTTTTCCCCCCTTTTCC+GGG + chr3_3:83423116-83423135 None:intergenic 45.0%
TTCATGGGGCTTTGCATTGT+GGG + chr3_3:83423416-83423435 None:intergenic 45.0%
CCCATGAAGACCAACTTCAA+TGG - chr3_3:83423428-83423447 Msa0478610:intron 45.0%
!! CCCATTGAAGTTGGTCTTCA+TGG + chr3_3:83423432-83423451 None:intergenic 45.0%
TTCAATGGGGAGGTTTGGAA+AGG - chr3_3:83423443-83423462 Msa0478610:intron 45.0%
ACCTGGTCGCAAGGTTTATT+CGG - chr3_3:83423528-83423547 Msa0478610:intron 45.0%
CTGAAGCCCCTTCAGAATAA+AGG - chr3_3:83423580-83423599 Msa0478610:intron 45.0%
AGCCCCTTCAGAATAAAGGT+AGG - chr3_3:83423584-83423603 Msa0478610:intron 45.0%
GAACCAGGAAGAGAAGTTGT+GGG + chr3_3:83423877-83423896 None:intergenic 45.0%
! TCCCCTTTTTGCAATCCTCA+CGG - chr3_3:83423895-83423914 Msa0478610:CDS 45.0%
ACCGTGAGGATTGCAAAAAG+GGG + chr3_3:83423899-83423918 None:intergenic 45.0%
CAACAATCGCCAACAATTGG+AGG + chr3_3:83423925-83423944 None:intergenic 45.0%
CTCCAATTGTTGGCGATTGT+TGG - chr3_3:83423923-83423942 Msa0478610:CDS 45.0%
AACACTTCACCTTACGAAGG+CGG + chr3_3:83423993-83424012 None:intergenic 45.0%
! AGGCTGATAATCTTTTCCCG+TGG - chr3_3:83424041-83424060 Msa0478610:CDS 45.0%
! GGCTGATAATCTTTTCCCGT+GGG - chr3_3:83424042-83424061 Msa0478610:CDS 45.0%
AGCACCCAATAATTCTCCCA+CGG + chr3_3:83424061-83424080 None:intergenic 45.0%
GATGACTTACTGCAGGCATT+AGG - chr3_3:83424193-83424212 Msa0478610:intron 45.0%
!! TGACTGGTTTAGGAGAGCAT+TGG - chr3_3:83424225-83424244 Msa0478610:intron 45.0%
CTTCCTCGTGGATATATCGA+GGG - chr3_3:83424319-83424338 Msa0478610:intron 45.0%
TCTGGTGAAGATGAACAAGC+AGG + chr3_3:83424432-83424451 None:intergenic 45.0%
GCTTGTTCATCTTCACCAGA+AGG - chr3_3:83424432-83424451 Msa0478610:intron 45.0%
AAAGAACCAAGTCGGCATCA+GGG + chr3_3:83424461-83424480 None:intergenic 45.0%
AAAAGAACCAAGTCGGCATC+AGG + chr3_3:83424462-83424481 None:intergenic 45.0%
!!! TGATGCCGACTTGGTTCTTT+TGG - chr3_3:83424461-83424480 Msa0478610:intron 45.0%
AAATACACTTGCTTGGGCAG+TGG - chr3_3:83424506-83424525 Msa0478610:intron 45.0%
! TTTGGGATGCTCAGAACTGT+AGG - chr3_3:83424614-83424633 Msa0478610:intron 45.0%
! TAAAATGAGCGAAGGCGTGT+GGG + chr3_3:83424839-83424858 None:intergenic 45.0%
AGCGTGAATGCATGACAACA+CGG + chr3_3:83425377-83425396 None:intergenic 45.0%
GCATTCACGCTACCATTATG+CGG - chr3_3:83425386-83425405 Msa0478610:intron 45.0%
! ACTGGCTTAGAACTGGAAGA+TGG - chr3_3:83425543-83425562 Msa0478610:intron 45.0%
CTGGCTTAGAACTGGAAGAT+GGG - chr3_3:83425544-83425563 Msa0478610:intron 45.0%
TGGCTTAGAACTGGAAGATG+GGG - chr3_3:83425545-83425564 Msa0478610:intron 45.0%
AGATCTTGTATCCACGGAAC+CGG + chr3_3:83425751-83425770 None:intergenic 45.0%
! TTGGCTCTCTTAGAAGACAG+TGG - chr3_3:83425789-83425808 Msa0478610:intron 45.0%
CTCTCTTAGAAGACAGTGGA+TGG - chr3_3:83425793-83425812 Msa0478610:intron 45.0%
ACGGTCTGCCATGCTATAAT+TGG + chr3_3:83425826-83425845 None:intergenic 45.0%
AATATTGTGCCCACTGAGGT+AGG + chr3_3:83426001-83426020 None:intergenic 45.0%
GGAAAATATTGTGCCCACTG+AGG + chr3_3:83426005-83426024 None:intergenic 45.0%
TCTGATTGATGTGTAGCTGC+TGG - chr3_3:83426166-83426185 Msa0478610:intron 45.0%
AATGAGTAGTGACAAGAGGG+TGG + chr3_3:83426243-83426262 None:intergenic 45.0%
! AGAATGCTTGGTGAAGTCAG+AGG - chr3_3:83426407-83426426 Msa0478610:intron 45.0%
CTGATAACAACCATTGCCCT+GGG + chr3_3:83426597-83426616 None:intergenic 45.0%
AGCAACCTGCAGGAAAAACA+TGG + chr3_3:83427221-83427240 None:intergenic 45.0%
!! TACAGAGCTCTGGATATGCA+GGG + chr3_3:83427425-83427444 None:intergenic 45.0%
!! TTACAGAGCTCTGGATATGC+AGG + chr3_3:83427426-83427445 None:intergenic 45.0%
ATTGACCGGACACAGATACT+GGG + chr3_3:83427455-83427474 None:intergenic 45.0%
! AGTGAGTACTGCATTGCTGA+AGG + chr3_3:83427630-83427649 None:intergenic 45.0%
GCCTTCCCTTAACTACTTCT+AGG - chr3_3:83427668-83427687 Msa0478610:intron 45.0%
CATTACCATTGCAATTGCCG+GGG + chr3_3:83427700-83427719 None:intergenic 45.0%
CCATTACCATTGCAATTGCC+GGG + chr3_3:83427701-83427720 None:intergenic 45.0%
GCCATTACCATTGCAATTGC+CGG + chr3_3:83427702-83427721 None:intergenic 45.0%
AATGGCATGTGCCTTTCCAA+TGG - chr3_3:83427716-83427735 Msa0478610:intron 45.0%
ATGGCATGTGCCTTTCCAAT+GGG - chr3_3:83427717-83427736 Msa0478610:intron 45.0%
AAGGTCAGATCCCAGAAATG+AGG + chr3_3:83427856-83427875 None:intergenic 45.0%
!! CAACCACCAATGGGTTACAT+AGG - chr3_3:83428282-83428301 Msa0478610:intron 45.0%
!!! ACCACTTGTAGTTTTGGGGA+GGG - chr3_3:83428321-83428340 Msa0478610:intron 45.0%
TGAGTGAGCCTAATCCATTC+AGG + chr3_3:83428367-83428386 None:intergenic 45.0%
CACAGCTGCATGTGATATGA+AGG + chr3_3:83428527-83428546 None:intergenic 45.0%
TATCACAAACCCCACCATGA+AGG + chr3_3:83428567-83428586 None:intergenic 45.0%
! CATGGTGGGGTTTGTGATAA+TGG - chr3_3:83428568-83428587 Msa0478610:intron 45.0%
TTCCGTTGTTCTGACTATGC+CGG - chr3_3:83428601-83428620 Msa0478610:intron 45.0%
ATCCGGCATAGTCAGAACAA+CGG + chr3_3:83428606-83428625 None:intergenic 45.0%
TGAGAGACTAGATAGGAGCA+TGG + chr3_3:83428647-83428666 None:intergenic 45.0%
TAGCACCACCAGGGAATAAT+CGG + chr3_3:83428777-83428796 None:intergenic 45.0%
ATAACTTCCTAGCACCACCA+GGG + chr3_3:83428786-83428805 None:intergenic 45.0%
AATAACTTCCTAGCACCACC+AGG + chr3_3:83428787-83428806 None:intergenic 45.0%
TTTAGCAGCCTCATCACAGT+AGG + chr3_3:83428827-83428846 None:intergenic 45.0%
ACTGTGATGAGGCTGCTAAA+CGG - chr3_3:83428827-83428846 Msa0478610:CDS 45.0%
GAAAAGACATCTTACCCAGC+AGG + chr3_3:83428857-83428876 None:intergenic 45.0%
CAAAAAACCGTGGTAGGACT+AGG + chr3_3:83429178-83429197 None:intergenic 45.0%
GCCGAAGTCTTCAGACAAAT+AGG + chr3_3:83429290-83429309 None:intergenic 45.0%
! CTCAATCCAGAAGTGTGACA+AGG - chr3_3:83429325-83429344 Msa0478610:intron 45.0%
! ATCCAGAAGTGTGACAAGGA+TGG - chr3_3:83429329-83429348 Msa0478610:intron 45.0%
AGGATGGAGACAACAGACTT+CGG - chr3_3:83429345-83429364 Msa0478610:intron 45.0%
CAAACCCTCTTTAGCAGTGA+GGG - chr3_3:83429431-83429450 Msa0478610:intron 45.0%
CAATTTCATCTCCCCAAACC+CGG + chr3_3:83429477-83429496 None:intergenic 45.0%
TTGGGGAGATGAAATTGTCG+TGG - chr3_3:83429480-83429499 Msa0478610:intron 45.0%
! GCCCCTTCTTTTAGCGATTT+TGG - chr3_3:83429590-83429609 Msa0478610:intron 45.0%
TCTACAAAAGGCTCTCCTCT+TGG + chr3_3:83429704-83429723 None:intergenic 45.0%
! CGAAGGCCTTGTAAGTTGTA+AGG - chr3_3:83429834-83429853 Msa0478610:intron 45.0%
TTTGGTAGGACCCGGAAAAG+GGG - chr3_3:83423103-83423122 Msa0478610:three_prime_UTR 50.0%
CTTCATGGGGCTTTGCATTG+TGG + chr3_3:83423417-83423436 None:intergenic 50.0%
GAAGACCAACTTCAATGGGG+AGG - chr3_3:83423433-83423452 Msa0478610:intron 50.0%
CCAAACCTCCCCATTGAAGT+TGG + chr3_3:83423441-83423460 None:intergenic 50.0%
CCAACTTCAATGGGGAGGTT+TGG - chr3_3:83423438-83423457 Msa0478610:intron 50.0%
CTTGAACAGAGAAAGCGACC+TGG - chr3_3:83423511-83423530 Msa0478610:intron 50.0%
ACCGAATAAACCTTGCGACC+AGG + chr3_3:83423532-83423551 None:intergenic 50.0%
GGTTTATTCGGTTACCCCAC+AGG - chr3_3:83423540-83423559 Msa0478610:intron 50.0%
GGAACCAGGAAGAGAAGTTG+TGG + chr3_3:83423878-83423897 None:intergenic 50.0%
GGATTGCAAAAAGGGGAACC+AGG + chr3_3:83423892-83423911 None:intergenic 50.0%
ACAATTGGAGGGTTACCGTG+AGG + chr3_3:83423913-83423932 None:intergenic 50.0%
CACGGTAACCCTCCAATTGT+TGG - chr3_3:83423913-83423932 Msa0478610:CDS 50.0%
GCACCCAATAATTCTCCCAC+GGG + chr3_3:83424060-83424079 None:intergenic 50.0%
CATTAGGTCAGACTGCTGAC+TGG - chr3_3:83424209-83424228 Msa0478610:intron 50.0%
!! GTCAGACTGCTGACTGGTTT+AGG - chr3_3:83424215-83424234 Msa0478610:intron 50.0%
ATTGGCTGTTGAGCCTGTCA+AGG - chr3_3:83424243-83424262 Msa0478610:intron 50.0%
TTGGCTGTTGAGCCTGTCAA+GGG - chr3_3:83424244-83424263 Msa0478610:intron 50.0%
AAGGGGAACTTGCGGTTAAG+TGG - chr3_3:83424262-83424281 Msa0478610:intron 50.0%
TCTGCATGTGGACAAGATGG+AGG - chr3_3:83424289-83424308 Msa0478610:intron 50.0%
GCTTCCTCGTGGATATATCG+AGG - chr3_3:83424318-83424337 Msa0478610:intron 50.0%
GTACCCTCGATATATCCACG+AGG + chr3_3:83424325-83424344 None:intergenic 50.0%
TCTCTGCCTCAGCAGTCAAA+TGG + chr3_3:83424678-83424697 None:intergenic 50.0%
AAATGAGATTGGAGCAGGGG+AGG - chr3_3:83424751-83424770 Msa0478610:intron 50.0%
! GAGCAGGGGAGGTAATTTGT+AGG - chr3_3:83424762-83424781 Msa0478610:intron 50.0%
! CTAAAATGAGCGAAGGCGTG+TGG + chr3_3:83424840-83424859 None:intergenic 50.0%
AAGGAAAAGACGGCGTGATC+AGG - chr3_3:83424866-83424885 Msa0478610:intron 50.0%
AGACGGCGTGATCAGGTATA+TGG - chr3_3:83424873-83424892 Msa0478610:intron 50.0%
GGATGAAAAGCTTGGACGGA+TGG - chr3_3:83425332-83425351 Msa0478610:intron 50.0%
CGTGAATGCATGACAACACG+GGG + chr3_3:83425375-83425394 None:intergenic 50.0%
GCGTGAATGCATGACAACAC+GGG + chr3_3:83425376-83425395 None:intergenic 50.0%
GGCTTAGAACTGGAAGATGG+GGG - chr3_3:83425546-83425565 Msa0478610:intron 50.0%
TTAGAACTGGAAGATGGGGG+AGG - chr3_3:83425549-83425568 Msa0478610:intron 50.0%
CAGGGTCTCATTGGGAGAAA+AGG - chr3_3:83425703-83425722 Msa0478610:intron 50.0%
! TGAGATTATGACCGGTTCCG+TGG - chr3_3:83425737-83425756 Msa0478610:intron 50.0%
CATGGCAGACCGTCTTGATT+GGG - chr3_3:83425833-83425852 Msa0478610:intron 50.0%
ATGGCAGACCGTCTTGATTG+GGG - chr3_3:83425834-83425853 Msa0478610:intron 50.0%
TTACCTCCCCTTGCAATCTC+TGG - chr3_3:83425880-83425899 Msa0478610:intron 50.0%
! TCCCCTTGCAATCTCTGGAA+GGG - chr3_3:83425885-83425904 Msa0478610:intron 50.0%
TCCCTTCCAGAGATTGCAAG+GGG + chr3_3:83425889-83425908 None:intergenic 50.0%
CTCCCTTCCAGAGATTGCAA+GGG + chr3_3:83425890-83425909 None:intergenic 50.0%
! ATAGTGGAGACCTACCTCAG+TGG - chr3_3:83425988-83426007 Msa0478610:intron 50.0%
TAGTGGAGACCTACCTCAGT+GGG - chr3_3:83425989-83426008 Msa0478610:intron 50.0%
TAACCTCCACTCGTTGATGC+AGG - chr3_3:83426293-83426312 Msa0478610:CDS 50.0%
ATCAGGTGCTCGTGCACTAT+TGG + chr3_3:83426387-83426406 None:intergenic 50.0%
CGAGCACCTGATAGAATGCT+TGG - chr3_3:83426395-83426414 Msa0478610:intron 50.0%
GCAGTCTGGTGCACAATTTG+CGG + chr3_3:83426458-83426477 None:intergenic 50.0%
TCCTGTGCGCACTAATGATG+AGG + chr3_3:83426555-83426574 None:intergenic 50.0%
! TGTACGTGGTTCTATGACCC+AGG - chr3_3:83426577-83426596 Msa0478610:intron 50.0%
! GTACGTGGTTCTATGACCCA+GGG - chr3_3:83426578-83426597 Msa0478610:intron 50.0%
GCTGATAACAACCATTGCCC+TGG + chr3_3:83426598-83426617 None:intergenic 50.0%
TTGGGAGCAATAGTCATGGC+AGG + chr3_3:83426987-83427006 None:intergenic 50.0%
! AGGCTCCATGTTTTTCCTGC+AGG - chr3_3:83427213-83427232 Msa0478610:intron 50.0%
! GTTTTTCCTGCAGGTTGCTG+TGG - chr3_3:83427222-83427241 Msa0478610:intron 50.0%
AGGTTGCTGTGGATGGTATC+TGG - chr3_3:83427233-83427252 Msa0478610:intron 50.0%
TCTGACCCAGTATCTGTGTC+CGG - chr3_3:83427447-83427466 Msa0478610:intron 50.0%
CATTGACCGGACACAGATAC+TGG + chr3_3:83427456-83427475 None:intergenic 50.0%
! GGAAGATGCCGCTGCTTTAT+TGG - chr3_3:83427513-83427532 Msa0478610:intron 50.0%
CTACTTCTAGGTTCTTGCCC+CGG - chr3_3:83427680-83427699 Msa0478610:intron 50.0%
CCCGGCAATTGCAATGGTAA+TGG - chr3_3:83427698-83427717 Msa0478610:intron 50.0%
!! TTGAGTGCTGGGGTTCCTTT+AGG - chr3_3:83428128-83428147 Msa0478610:intron 50.0%
CAGCCTATGTAACCCATTGG+TGG + chr3_3:83428288-83428307 None:intergenic 50.0%
!! CACCAATGGGTTACATAGGC+TGG - chr3_3:83428286-83428305 Msa0478610:intron 50.0%
CACCAGCCTATGTAACCCAT+TGG + chr3_3:83428291-83428310 None:intergenic 50.0%
!!! CACCACTTGTAGTTTTGGGG+AGG - chr3_3:83428320-83428339 Msa0478610:intron 50.0%
GATGAGCAATGCAGCCTTCA+TGG - chr3_3:83428550-83428569 Msa0478610:intron 50.0%
AGCAATGCAGCCTTCATGGT+GGG - chr3_3:83428554-83428573 Msa0478610:intron 50.0%
GCTGTTCTGGCATGTGTATC+CGG + chr3_3:83428623-83428642 None:intergenic 50.0%
! ATAGGAGCATGGAGCTGTTC+TGG + chr3_3:83428636-83428655 None:intergenic 50.0%
TCCAACTGCTGCAGTATGCT+AGG + chr3_3:83428727-83428746 None:intergenic 50.0%
ACTGCAGCAGTTGGAAGAAG+TGG - chr3_3:83428732-83428751 Msa0478610:CDS 50.0%
! TACCACCGATTATTCCCTGG+TGG - chr3_3:83428769-83428788 Msa0478610:CDS 50.0%
! GATTATTCCCTGGTGGTGCT+AGG - chr3_3:83428776-83428795 Msa0478610:CDS 50.0%
ATACCTCCCTAGTCCTACCA+CGG - chr3_3:83429168-83429187 Msa0478610:CDS 50.0%
CTCCATCCTTGTCACACTTC+TGG + chr3_3:83429334-83429353 None:intergenic 50.0%
GGATGGAGACAACAGACTTC+GGG - chr3_3:83429346-83429365 Msa0478610:intron 50.0%
CCTCACTGCTAAAGAGGGTT+TGG + chr3_3:83429433-83429452 None:intergenic 50.0%
CCAAACCCTCTTTAGCAGTG+AGG - chr3_3:83429430-83429449 Msa0478610:intron 50.0%
! GATTGTCAAGCTTTGGCCGA+AGG - chr3_3:83429817-83429836 Msa0478610:intron 50.0%
TTGGTAGGACCCGGAAAAGG+GGG - chr3_3:83423104-83423123 Msa0478610:three_prime_UTR 55.0%
ACCAGGCTCGTAAACCTGTG+GGG + chr3_3:83423557-83423576 None:intergenic 55.0%
GACCAGGCTCGTAAACCTGT+GGG + chr3_3:83423558-83423577 None:intergenic 55.0%
GACAATCTCTGTCAGGGGAG+TGG + chr3_3:83423696-83423715 None:intergenic 55.0%
CCAGGAAGAGAAGTTGTGGG+AGG + chr3_3:83423874-83423893 None:intergenic 55.0%
CCTCCCACAACTTCTCTTCC+TGG - chr3_3:83423871-83423890 Msa0478610:CDS 55.0%
!! CAAAAAGCGCCGCCTTCGTA+AGG - chr3_3:83423981-83424000 Msa0478610:CDS 55.0%
ACATCTCTTTGGGCAGTGGG+AGG - chr3_3:83424103-83424122 Msa0478610:CDS 55.0%
CATCTCTTTGGGCAGTGGGA+GGG - chr3_3:83424104-83424123 Msa0478610:CDS 55.0%
ATCTCTTTGGGCAGTGGGAG+GGG - chr3_3:83424105-83424124 Msa0478610:CDS 55.0%
TGGCTGTTGAGCCTGTCAAG+GGG - chr3_3:83424245-83424264 Msa0478610:intron 55.0%
AGCCTGTCAAGGGGAACTTG+CGG - chr3_3:83424254-83424273 Msa0478610:intron 55.0%
AACCGCAAGTTCCCCTTGAC+AGG + chr3_3:83424259-83424278 None:intergenic 55.0%
TGGCGTGTGAACGGGATCAA+TGG - chr3_3:83424526-83424545 Msa0478610:intron 55.0%
GGCGTGTGAACGGGATCAAT+GGG - chr3_3:83424527-83424546 Msa0478610:intron 55.0%
GCGTGTGAACGGGATCAATG+GGG - chr3_3:83424528-83424547 Msa0478610:intron 55.0%
TCCTCGCCATTTGACTGCTG+AGG - chr3_3:83424669-83424688 Msa0478610:intron 55.0%
TGGACGGATGGTCAATCGAG+TGG - chr3_3:83425344-83425363 Msa0478610:intron 55.0%
CTTGCTGGACAGGCATACTC+TGG - chr3_3:83425513-83425532 Msa0478610:intron 55.0%
GCATGGCAGACCGTCTTGAT+TGG - chr3_3:83425832-83425851 Msa0478610:intron 55.0%
GGTTGCGACCCCAATCAAGA+CGG + chr3_3:83425845-83425864 None:intergenic 55.0%
CTTGATTGGGGTCGCAACCA+AGG - chr3_3:83425846-83425865 Msa0478610:intron 55.0%
CTTCCAGAGATTGCAAGGGG+AGG + chr3_3:83425886-83425905 None:intergenic 55.0%
CTCCCCTTGCAATCTCTGGA+AGG - chr3_3:83425884-83425903 Msa0478610:intron 55.0%
GCTCCCTTCCAGAGATTGCA+AGG + chr3_3:83425891-83425910 None:intergenic 55.0%
TGTCCACCTGCATCAACGAG+TGG + chr3_3:83426302-83426321 None:intergenic 55.0%
GCCTCATCATTAGTGCGCAC+AGG - chr3_3:83426551-83426570 Msa0478610:intron 55.0%
GTGCGCACAGGATTTGTACG+TGG - chr3_3:83426563-83426582 Msa0478610:intron 55.0%
GGTTCTATGACCCAGGGCAA+TGG - chr3_3:83426584-83426603 Msa0478610:intron 55.0%
TTCCTGCAGGTTGCTGTGGA+TGG - chr3_3:83427226-83427245 Msa0478610:intron 55.0%
TACCATCCACAGCAACCTGC+AGG + chr3_3:83427231-83427250 None:intergenic 55.0%
! TGGAAAGTGTGTCCTCGTGC+TGG - chr3_3:83427253-83427272 Msa0478610:intron 55.0%
AAAGTGTGTCCTCGTGCTGG+TGG - chr3_3:83427256-83427275 Msa0478610:intron 55.0%
AGAATAGCTCCACCAGCACG+AGG + chr3_3:83427268-83427287 None:intergenic 55.0%
GGTGGAGCTATTCTGTTCCC+TGG - chr3_3:83427274-83427293 Msa0478610:intron 55.0%
GGGTCAGAGTTACAGAGCTC+TGG + chr3_3:83427435-83427454 None:intergenic 55.0%
TCTTGCCCCGGCAATTGCAA+TGG - chr3_3:83427692-83427711 Msa0478610:intron 55.0%
GCCCTCCCCAAAACTACAAG+TGG + chr3_3:83428325-83428344 None:intergenic 55.0%
TTAGGCTCACTCACACCCCA+AGG - chr3_3:83428374-83428393 Msa0478610:intron 55.0%
TAGGCTCACTCACACCCCAA+GGG - chr3_3:83428375-83428394 Msa0478610:CDS 55.0%
!! ACTCACACCCCAAGGGTACT+GGG - chr3_3:83428382-83428401 Msa0478610:CDS 55.0%
GTATCCTCCCAGTACCCTTG+GGG + chr3_3:83428392-83428411 None:intergenic 55.0%
GGTATCCTCCCAGTACCCTT+GGG + chr3_3:83428393-83428412 None:intergenic 55.0%
GAGCAATGCAGCCTTCATGG+TGG - chr3_3:83428553-83428572 Msa0478610:intron 55.0%
GCAATGCAGCCTTCATGGTG+GGG - chr3_3:83428555-83428574 Msa0478610:intron 55.0%
TGCAGTATGCTAGGCTCGCT+GGG + chr3_3:83428718-83428737 None:intergenic 55.0%
GCCTAGCATACTGCAGCAGT+TGG - chr3_3:83428723-83428742 Msa0478610:CDS 55.0%
CACCACCAGGGAATAATCGG+TGG + chr3_3:83428774-83428793 None:intergenic 55.0%
TGGCAGCACCTACTGTGATG+AGG - chr3_3:83428816-83428835 Msa0478610:CDS 55.0%
TGCTAAACGGCTTGCCTGCT+GGG - chr3_3:83428840-83428859 Msa0478610:intron 55.0%
AAACCGTGGTAGGACTAGGG+AGG + chr3_3:83429174-83429193 None:intergenic 55.0%
CTCGCCCTCACTGCTAAAGA+GGG + chr3_3:83429438-83429457 None:intergenic 55.0%
CTCTTTAGCAGTGAGGGCGA+GGG - chr3_3:83429437-83429456 Msa0478610:intron 55.0%
TCTTTAGCAGTGAGGGCGAG+GGG - chr3_3:83429438-83429457 Msa0478610:intron 55.0%
TGGTTTAGTCGCCTGCGAAG+TGG - chr3_3:83429500-83429519 Msa0478610:intron 55.0%
TCGCTAAAAGAAGGGGCGGA+AGG + chr3_3:83429587-83429606 None:intergenic 55.0%
TGGTAGGACCCGGAAAAGGG+GGG - chr3_3:83423105-83423124 Msa0478610:three_prime_UTR 60.0%
GAGAAAGCGACCTGGTCGCA+AGG - chr3_3:83423519-83423538 Msa0478610:intron 60.0%
ACCCCACAGGTTTACGAGCC+TGG - chr3_3:83423553-83423572 Msa0478610:intron 60.0%
CGACCAGGCTCGTAAACCTG+TGG + chr3_3:83423559-83423578 None:intergenic 60.0%
TGAAGGGGCTTCAGTCGACC+AGG + chr3_3:83423574-83423593 None:intergenic 60.0%
TCGGCATCAGGGACACCTTC+TGG + chr3_3:83424450-83424469 None:intergenic 60.0%
! AGGTGTCCCTGATGCCGACT+TGG - chr3_3:83424452-83424471 Msa0478610:intron 60.0%
CTTGGGCAGTGGCGTGTGAA+CGG - chr3_3:83424517-83424536 Msa0478610:intron 60.0%
TTGGGCAGTGGCGTGTGAAC+GGG - chr3_3:83424518-83424537 Msa0478610:intron 60.0%
CAATGGGGCCGTGCTATAGC+TGG - chr3_3:83424543-83424562 Msa0478610:intron 60.0%
GCCTCAGCAGTCAAATGGCG+AGG + chr3_3:83424673-83424692 None:intergenic 60.0%
CCACCTGCATCAACGAGTGG+AGG + chr3_3:83426299-83426318 None:intergenic 60.0%
CCTCCACTCGTTGATGCAGG+TGG - chr3_3:83426296-83426315 Msa0478610:CDS 60.0%
ATCGCATCAGCCCTACTCCG+TGG - chr3_3:83426811-83426830 Msa0478610:CDS 60.0%
! CACTCACACCCCAAGGGTAC+TGG - chr3_3:83428381-83428400 Msa0478610:CDS 60.0%
GGGTATCCTCCCAGTACCCT+TGG + chr3_3:83428394-83428413 None:intergenic 60.0%
CTGCAGTATGCTAGGCTCGC+TGG + chr3_3:83428719-83428738 None:intergenic 60.0%
CTGCTAAACGGCTTGCCTGC+TGG - chr3_3:83428839-83428858 Msa0478610:intron 60.0%
CCTCGCCCTCACTGCTAAAG+AGG + chr3_3:83429439-83429458 None:intergenic 60.0%
CCTCTTTAGCAGTGAGGGCG+AGG - chr3_3:83429436-83429455 Msa0478610:intron 60.0%
AGGGTCAGTGCACCGGGTTT+GGG - chr3_3:83429462-83429481 Msa0478610:intron 60.0%
CTGGAAGATGGGGGAGGACG+CGG - chr3_3:83425555-83425574 Msa0478610:intron 65.0%
!! CACACCCCAAGGGTACTGGG+AGG - chr3_3:83428385-83428404 Msa0478610:CDS 65.0%
CAGGGTCAGTGCACCGGGTT+TGG - chr3_3:83429461-83429480 Msa0478610:intron 65.0%
GGGTCAGTGCACCGGGTTTG+GGG - chr3_3:83429463-83429482 Msa0478610:intron 65.0%
! GGAGGCGTGCAGCTTCCTCG+TGG - chr3_3:83424307-83424326 Msa0478610:intron 70.0%
TAGCAGTGAGGGCGAGGGGC+AGG - chr3_3:83429442-83429461 Msa0478610:intron 70.0%
AGCAGTGAGGGCGAGGGGCA+GGG - chr3_3:83429443-83429462 Msa0478610:intron 70.0%
GAGGGGCAGGGTCAGTGCAC+CGG - chr3_3:83429455-83429474 Msa0478610:intron 70.0%
AGGGGCAGGGTCAGTGCACC+GGG - chr3_3:83429456-83429475 Msa0478610:intron 70.0%
GGGGGAGGACGCGGCACATC+AGG - chr3_3:83425564-83425583 Msa0478610:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 83422787 83429928 83422787 ID=Msa0478610;Name=Msa0478610
chr3_3 mRNA 83422787 83429928 83422787 ID=Msa0478610-mRNA-1;Parent=Msa0478610;Name=Msa0478610-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.93|0.94|0.94|1|1|17|345|837
chr3_3 exon 83422787 83423392 83422787 ID=Msa0478610-mRNA-1:exon:23460;Parent=Msa0478610-mRNA-1
chr3_3 exon 83423854 83424173 83423854 ID=Msa0478610-mRNA-1:exon:23459;Parent=Msa0478610-mRNA-1
chr3_3 exon 83424930 83425025 83424930 ID=Msa0478610-mRNA-1:exon:23458;Parent=Msa0478610-mRNA-1
chr3_3 exon 83425154 83425306 83425154 ID=Msa0478610-mRNA-1:exon:23457;Parent=Msa0478610-mRNA-1
chr3_3 exon 83425411 83425480 83425411 ID=Msa0478610-mRNA-1:exon:23456;Parent=Msa0478610-mRNA-1
chr3_3 exon 83426072 83426171 83426072 ID=Msa0478610-mRNA-1:exon:23455;Parent=Msa0478610-mRNA-1
chr3_3 exon 83426274 83426400 83426274 ID=Msa0478610-mRNA-1:exon:23454;Parent=Msa0478610-mRNA-1
chr3_3 exon 83426677 83427009 83426677 ID=Msa0478610-mRNA-1:exon:23453;Parent=Msa0478610-mRNA-1
chr3_3 exon 83427130 83427190 83427130 ID=Msa0478610-mRNA-1:exon:23452;Parent=Msa0478610-mRNA-1
chr3_3 exon 83427308 83427400 83427308 ID=Msa0478610-mRNA-1:exon:23451;Parent=Msa0478610-mRNA-1
chr3_3 exon 83427828 83427902 83427828 ID=Msa0478610-mRNA-1:exon:23450;Parent=Msa0478610-mRNA-1
chr3_3 exon 83427989 83428062 83427989 ID=Msa0478610-mRNA-1:exon:23449;Parent=Msa0478610-mRNA-1
chr3_3 exon 83428151 83428264 83428151 ID=Msa0478610-mRNA-1:exon:23448;Parent=Msa0478610-mRNA-1
chr3_3 exon 83428375 83428507 83428375 ID=Msa0478610-mRNA-1:exon:23447;Parent=Msa0478610-mRNA-1
chr3_3 exon 83428713 83428853 83428713 ID=Msa0478610-mRNA-1:exon:23446;Parent=Msa0478610-mRNA-1
chr3_3 exon 83428977 83429330 83428977 ID=Msa0478610-mRNA-1:exon:23445;Parent=Msa0478610-mRNA-1
chr3_3 exon 83429920 83429928 83429920 ID=Msa0478610-mRNA-1:exon:23444;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83429920 83429928 83429920 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83428977 83429330 83428977 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83428713 83428853 83428713 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83428375 83428507 83428375 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83428151 83428264 83428151 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83427989 83428062 83427989 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83427828 83427902 83427828 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83427308 83427400 83427308 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83427130 83427190 83427130 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83426677 83427009 83426677 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83426274 83426400 83426274 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83426072 83426171 83426072 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83425411 83425480 83425411 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83425154 83425306 83425154 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83424930 83425025 83424930 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83423854 83424173 83423854 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 CDS 83423132 83423392 83423132 ID=Msa0478610-mRNA-1:cds;Parent=Msa0478610-mRNA-1
chr3_3 three_prime_UTR 83422787 83423131 83422787 ID=Msa0478610-mRNA-1:three_prime_utr;Parent=Msa0478610-mRNA-1
Gene Sequence

>Msa0478610

ATGAAGCTGATCATATTGATATTGGCATCTTTGGAAGCCCACAATGCAAAGCCCCATGAAGACCAACTTCAATGGGGAGGTTTGGAAAGGAATACAAACAACATTGTCTCACACTCTTGTATACATGACCAGATTCTTGAACAGAGAAAGCGACCTGGTCGCAAGGTTTATTCGGTTACCCCACAGGTTTACGAGCCTGGTCGACTGAAGCCCCTTCAGAATAAAGGTAGGACAATTCTTGAAGTGTCAACATCATCAGAGTCTCAGAATGATGTGAAGGAACCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGAGATTGTCGAAAAGTCGGTGCTGTTGTTAAACTTGGAGAGCCTCCCACAACTTCTCTTCCTGGTTCCCCTTTTTGCAATCCTCACGGTAACCCTCCAATTGTTGGCGATTGTTGGTACAACTGCACTTCTGAAGATATCTCAGGTGAAGACAAAAAGCGCCGCCTTCGTAAGGCATTAGGTCAGACTGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGGAACTTGCGGTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCGTGGATATATCGAGGAAGGTGTCCCTGATGCCGACTTGGTTCTTTTGGTAACTACAAGACCTACAACTGGAAATACACTTGCTTGGGCAGTGGCGTGTGAACGGGATCAATGGGGCCGTGCTATAGCTGGACATGTGAATGTTGCTCCTCGCCATTTGACTGCTGAGGCAGAGACTTTGCTTTCAGCTACTCTAATACACGAGGTTATGCATGTTCTTGGTTTTGACCCACACGCCTTCGCTCATTTTAGAGATGAAAGGAAAAGACGGCGTGATCAGGTTACAGAACAAGTAATGGATGAAAAGCTTGGACGGATGGTCAATCGAGTGGTGCTTCCCCGTGTTGTCATGCATTCACGCTACCATTATGCGGCATACTCTGGAAATTTTACTGGCTTAGAACTGGAAGATGGGGGAGGACGCGGCACATCAGGGTCTCATTGGGAGAAAAGGCTTCTGATGAATGAGATTATGACCGGTTCCGTGGATACAAGATCTGTAGTTTCAAAAATGACGTTGGCTCTCTTAGAAGACAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGTCGCAACCAAGGTACTGAATTTGTTACCTCCCCTTGCAATCTCTGGAAGGGAGCTTATCGTTGCAACACAACACAATATTCTGGCTGTACATATAACAGAGAGGCAGAGGGATACTGCCCAATCCTAACATATAGTGGAGACCTACCTCAGTGGGCACAATATTTTCCACAAGCTAATAAAGGTGGACAATCCTCATTAGCTGATTATTGCACCTATTTTGTTGCGTACTCTGATGGATCATGTACAGACACCAATAGTGCACGAGCACCTGATAGAATGCTTGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGTGGTTCTATGACCCAGGGCAATGGTTGTTATCAGCACAGATGTATAAACAGTTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCGTGCTGGTGGAGCTATTCTGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATATCCAGAGCTCTGTAACTCTGACCCAGTATCTGTGTCCGGTCAATGTCCCAATTCATGTAATTTCAATGGAGATTGTGTCGATGGAAGATGCCGCTGCTTTATTGGATTTCATGGACACGATTGCAGTAGACGTTCTTGCCCCGGCAATTGCAATGGTAATGGCATGTGCCTTTCCAATGGGATCTGTGAATGTAAAACTGGCTACACCGGCATCGACTGTTCCACTGCTGTGTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCCGGATACACATGCCAGAACAGCTCCATGCTCCTATCTAGTCTCTCAGTTTGCAAAAATGTACTGGTAAATGATGTATCTGGTCAGCATTGTGCACCCAGCGAGCCTAGCATACTGCAGCAGTTGGAAGAAGTGGTTGTTATGCCAAATTACCACCGATTATTCCCTGGTGGTGCTAGGAAGTTATTTAATATATTTGGCAGCACCTACTGTGATGAGGCTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAAGGATGGAGACAACAGACTTCGGGTATGCCATTCCGCATGCCAATCTTATAATATAGCATGTGGGGCTTCACTTGAGTGCTCTGACCAAACCCTCTTTAGCAGTGAGGGCGAGGGGCAGGGTCAGTGCACCGGGTTTGGGGAGATGAAATTGTCGTGGTTTAGTCGCCTGCGAAGTGGTTTTTCTTTGAGAAATAATAGTTCTTTAAAAGGAATGTCTGTAAGATATAGGAAGCTTTAA
Protein sequence

>Msa0478610

MKLIILILASLEAHNAKPHEDQLQWGGLERNTNNIVSHSCIHDQILEQRKRPGRKVYSVTPQVYEPGRLKPLQNKGRTILEVSTSSESQNDVKEPIRIYLNYDAVGHSPDRDCRKVGAVVKLGEPPTTSLPGSPFCNPHGNPPIVGDCWYNCTSEDISGEDKKRRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVPDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRDQVTEQVMDEKLGRMVNRVVLPRVVMHSRYHYAAYSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYRCNTTQYSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINSSLEVAVDGIWKVCPRAGGAILFPGFNGELICPAYPELCNSDPVSVSGQCPNSCNFNGDCVDGRCRCFIGFHGHDCSRRSCPGNCNGNGMCLSNGICECKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLVNDVSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNIACGASLECSDQTLFSSEGEGQGQCTGFGEMKLSWFSRLRSGFSLRNNSSLKGMSVRYRKL*