AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0386960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0386960 MtrunA17_Chr3g0145031 98.104 211 2 1 1 209 1 211 7.15e-156 437
Msa0386960 MtrunA17_Chr3g0145031 61.780 191 44 3 217 378 28 218 1.44e-72 225
Msa0386960 MtrunA17_Chr3g0145041 78.125 192 17 2 212 378 5 196 3.66e-100 295
Msa0386960 MtrunA17_Chr3g0145041 68.912 193 54 2 19 209 1 189 6.28e-94 279
Msa0386960 MtrunA17_Chr2g0316511 66.509 212 65 4 1 209 1 209 1.81e-95 284
Msa0386960 MtrunA17_Chr2g0316511 45.550 191 75 4 217 378 26 216 9.96e-47 159
Msa0386960 MtrunA17_Chr2g0324381 50.000 192 86 6 1 188 10 195 1.05e-57 186
Msa0386960 MtrunA17_Chr2g0324381 42.515 167 65 5 218 354 34 199 1.69e-33 123
Msa0386960 MtrunA17_Chr5g0447451 44.961 129 59 6 74 190 15 143 4.48e-27 104
Msa0386960 MtrunA17_Chr2g0324361 51.000 100 43 4 27 124 12 107 4.54e-25 98.2
Msa0386960 MtrunA17_Chr2g0324361 47.959 98 43 4 217 309 13 107 5.47e-18 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0386960 AT4G39100.1 69.668 211 59 3 1 209 1 208 1.61e-108 318
Msa0386960 AT4G39100.1 49.020 204 72 5 203 375 10 212 3.00e-56 184
Msa0386960 AT4G22140.2 65.877 211 66 4 2 209 10 217 1.18e-100 297
Msa0386960 AT4G22140.2 46.597 191 73 4 217 378 34 224 8.94e-52 172
Msa0386960 AT4G22140.1 65.877 211 66 4 2 209 10 217 2.04e-100 297
Msa0386960 AT4G22140.1 45.652 184 71 4 217 371 34 217 1.66e-47 161
Msa0386960 AT4G22140.3 65.877 211 66 4 2 209 10 217 2.04e-100 297
Msa0386960 AT4G22140.3 45.652 184 71 4 217 371 34 217 1.66e-47 161
Msa0386960 AT4G39100.2 75.758 165 36 2 1 163 1 163 8.10e-91 270
Msa0386960 AT4G39100.2 58.333 132 47 3 203 326 10 141 1.87e-44 151
Msa0386960 AT4G04260.2 57.921 202 74 5 28 225 9 203 3.86e-73 227
Msa0386960 AT4G04260.2 41.530 183 78 4 217 370 9 191 8.44e-42 145
Msa0386960 AT4G04260.1 56.853 197 74 5 33 225 1 190 6.19e-69 215
Msa0386960 AT4G04260.1 40.449 178 77 4 222 370 1 178 1.38e-38 137
Msa0386960 AT4G04260.3 69.492 118 33 2 25 140 24 140 4.96e-52 170
Msa0386960 AT4G04260.3 52.800 125 50 3 206 325 20 140 6.20e-36 128

Find 121 sgRNAs with CRISPR-Local

Find 687 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAGGAATACCTTTGTATT+TGG 0.149988 3_1:+90793274 None:intergenic
ATGACTCTAGGTTTCGCTTT+GGG 0.256713 3_1:+90801924 None:intergenic
AGAGAAGTAGAGGGGTTTGT+TGG 0.281029 3_1:+90802094 None:intergenic
AAAAGAAGGTTATGGCAATT+TGG 0.283943 3_1:+90802064 None:intergenic
AGGTTTCGCTTTGGGGCTTT+TGG 0.301619 3_1:+90801932 None:intergenic
AATGAAGTTGTCAATTCTTT+CGG 0.316759 3_1:+90793360 None:intergenic
CTTTGCCACGTAAGAGGGTT+TGG 0.340256 3_1:+90801746 None:intergenic
GAAGGAAAGTGTATTGTTCA+TGG 0.347757 3_1:-90801564 Msa0386960:CDS
TTAGGAATACCTTTGTATTT+GGG 0.355673 3_1:+90793275 None:intergenic
AAAGAAGTGGTCAAGTCTTT+CGG 0.363321 3_1:+90799108 None:intergenic
ACTCACACTGCAACTCTATC+AGG 0.365443 3_1:+90801453 None:intergenic
GAAAAGAAAGATTGAATTGA+AGG 0.367791 3_1:+90802028 None:intergenic
AAGGACCCGATGAGGATATA+TGG 0.371664 3_1:+90792228 None:intergenic
ACCATCACTTTCATCTTTGA+CGG 0.371838 3_1:+90792427 None:intergenic
TTAACGTCCGGTGGTATTAC+CGG 0.372519 3_1:-90801680 Msa0386960:CDS
AAAATGCACTGTTCACAGTT+TGG 0.374580 3_1:-90794995 Msa0386960:CDS
CACTGAACCATCAGATCATC+AGG 0.376018 3_1:+90800668 None:intergenic
TGTGAAAGTTGTTCCGTTGA+AGG 0.381340 3_1:-90799085 Msa0386960:CDS
GAAAGTCTTAATGTGTATAC+TGG 0.395769 3_1:+90792156 None:intergenic
ACTCACACTTGAACTATATC+AGG 0.399463 3_1:+90794889 None:intergenic
TGTTGGTATCCACGGTTTAG+AGG 0.405406 3_1:+90795182 None:intergenic
TTCGTGTCCGTTGGTACTAC+TGG 0.414838 3_1:-90795116 Msa0386960:CDS
CATCAGATCATCAGGGTTGT+AGG 0.418034 3_1:+90800676 None:intergenic
ATCAAAGAGTTTGACTTTCG+AGG 0.418489 3_1:+90802200 None:intergenic
GGTGTACATTAGATATATAA+TGG 0.440667 3_1:-90792407 Msa0386960:three_prime_UTR
TTCGATCTTTGCCACGTAAG+AGG 0.444854 3_1:+90801740 None:intergenic
TATGACTCTAGGTTTCGCTT+TGG 0.453882 3_1:+90801923 None:intergenic
TTGAACTACAATTCCGCTAC+TGG 0.456893 3_1:-90794922 Msa0386960:CDS
ATAGAAATAAAAGAAGGTTA+TGG 0.462193 3_1:+90802056 None:intergenic
CAAACTCTTTGATAGTAAGT+TGG 0.472062 3_1:-90802190 Msa0386960:five_prime_UTR
TTTGAGTACAATTCTGCTAC+TGG 0.478917 3_1:-90801486 Msa0386960:CDS
TGGTAGTTAAAGAGAAGTAG+AGG 0.479471 3_1:+90802084 None:intergenic
GTTTCTCCATATATCCTCAT+CGG 0.495271 3_1:-90792234 Msa0386960:three_prime_UTR
CAGAGTGCTGATACAATTGA+AGG 0.496733 3_1:-90801582 Msa0386960:CDS
AGTGTGAGGGCTGCAGTGAC+TGG 0.500549 3_1:-90800649 Msa0386960:intron
TCGATCTTTGCCACGTAAGA+GGG 0.507398 3_1:+90801741 None:intergenic
TGACTCTAGGTTTCGCTTTG+GGG 0.508250 3_1:+90801925 None:intergenic
GCCACGTAAGAGGGTTTGGA+TGG 0.509773 3_1:+90801750 None:intergenic
GAGACAGTTTCACGGTTCAA+AGG 0.514600 3_1:-90801634 Msa0386960:CDS
GATTCTCTATCTATCCCCAT+CGG 0.517084 3_1:-90798031 Msa0386960:CDS
GGTAGTTAAAGAGAAGTAGA+GGG 0.520077 3_1:+90802085 None:intergenic
TACCGGCCGGAGGAGTCAAT+TGG 0.521187 3_1:-90801663 Msa0386960:CDS
CAAGAGACGTTCGTGTCCGT+TGG 0.522823 3_1:-90795125 Msa0386960:CDS
TTTCTCCATATATCCTCATC+GGG 0.523027 3_1:-90792233 Msa0386960:three_prime_UTR
AACAAATCTGTCACAATCAA+AGG 0.523901 3_1:-90801884 Msa0386960:intron
ATCAGATCATCAGGGTTGTA+GGG 0.525800 3_1:+90800677 None:intergenic
ATCACTGTTTCCCTAGGTAG+TGG 0.526395 3_1:-90792299 Msa0386960:three_prime_UTR
CGACCCTTCTTTGTCTCCTC+CGG 0.527955 3_1:+90795093 None:intergenic
TACATGAAGCTTGATGTTGT+TGG 0.528797 3_1:-90794967 Msa0386960:CDS
GCCACATATGTTGGTATCCA+CGG 0.537762 3_1:+90795174 None:intergenic
TGCTTTGTCTTTGAGTGGCA+TGG 0.540617 3_1:+90802161 None:intergenic
CGGCCACCAATTGACTCCTC+CGG 0.542045 3_1:+90801657 None:intergenic
AAACACATCCTCCACTACCT+AGG 0.542451 3_1:+90792288 None:intergenic
GAGAAAATAGAAATAAAAGA+AGG 0.542861 3_1:+90802050 None:intergenic
CTACAACCCTGATGATCTGA+TGG 0.544719 3_1:-90800675 Msa0386960:CDS
TGATCTGATGGTTCAGTGTG+AGG 0.546259 3_1:-90800663 Msa0386960:CDS
ATTCTCTATCTATCCCCATC+GGG 0.547443 3_1:-90798030 Msa0386960:intron
CAACTGCCAACACGATTCAC+TGG 0.547820 3_1:+90792127 None:intergenic
TACATTAGATATATAATGGA+CGG 0.550351 3_1:-90792403 Msa0386960:three_prime_UTR
ACCAAGGATTTGAAAAGCTA+GGG 0.551461 3_1:+90792378 None:intergenic
TACCAAGGATTTGAAAAGCT+AGG 0.554541 3_1:+90792377 None:intergenic
CGGCCGGAGGAGTCAATTGG+TGG 0.557866 3_1:-90801660 Msa0386960:CDS
GAGGGTTTGGATGGATCAGA+TGG 0.563022 3_1:+90801759 None:intergenic
TACACTAAGCTTGATGCTGT+TGG 0.564424 3_1:-90801531 Msa0386960:CDS
AGTTTATTCAGCTCCTACCA+AGG 0.567083 3_1:+90792362 None:intergenic
CGGAGGAGTCAATTGGTGGC+CGG 0.567621 3_1:-90801656 Msa0386960:CDS
GTTTGACTGAGTATGACTCT+AGG 0.568800 3_1:+90801912 None:intergenic
CAGTGAATCGTGTTGGCAGT+TGG 0.569218 3_1:-90792126 Msa0386960:three_prime_UTR
AACACATCCTCCACTACCTA+GGG 0.569275 3_1:+90792289 None:intergenic
GTAGTTAAAGAGAAGTAGAG+GGG 0.569534 3_1:+90802086 None:intergenic
ACCGTCATGTCTATACAAGC+AGG 0.569799 3_1:+90793391 None:intergenic
AAGGGTCGGCGTCATTTCCA+TGG 0.570085 3_1:-90795078 Msa0386960:CDS
GGTGGCCGGAGACAGTTTCA+CGG 0.570440 3_1:-90801642 Msa0386960:CDS
CTGGCCGGAGGAGACAAAGA+AGG 0.572097 3_1:-90795097 Msa0386960:CDS
TAAAATGCTTTGTCTTTGAG+TGG 0.576034 3_1:+90802156 None:intergenic
ACCGTGGATACCAACATATG+TGG 0.579459 3_1:-90795175 Msa0386960:CDS
TGTCCGTTGGTACTACTGGC+CGG 0.580901 3_1:-90795112 Msa0386960:CDS
AGCTGAATAAACTCTGACAA+TGG 0.581923 3_1:-90792352 Msa0386960:three_prime_UTR
ACAGTCATGTCTATACAAGC+AGG 0.584679 3_1:+90799139 None:intergenic
CACCAATTGACTCCTCCGGC+CGG 0.585767 3_1:+90801661 None:intergenic
TCTTACGTGGCAAAGATCGA+AGG 0.586509 3_1:-90801738 Msa0386960:CDS
TCGATCATAGCCACATATGT+TGG 0.588140 3_1:+90795165 None:intergenic
ACATTAGATATATAATGGAC+GGG 0.589985 3_1:-90792402 Msa0386960:three_prime_UTR
GTAACCATCACTGTTTCCCT+AGG 0.592283 3_1:-90792305 Msa0386960:three_prime_UTR
AACAACTTTCACAAAAGAAG+TGG 0.593717 3_1:+90799095 None:intergenic
GCGTCATTTCCATGGCTCAA+AGG 0.593809 3_1:-90795070 Msa0386960:CDS
TTGAACCGTGAAACTGTCTC+CGG 0.596615 3_1:+90801637 None:intergenic
GATCTGATGGTTCAGTGTGA+GGG 0.605136 3_1:-90800662 Msa0386960:CDS
CGTGTGCTTTACACATCACA+CGG 0.608973 3_1:+90802127 None:intergenic
CAAAAGTCTGAGTATGAACA+AGG 0.609731 3_1:+90792209 None:intergenic
TATTCACCAGTGAATCGTGT+TGG 0.610674 3_1:-90792133 Msa0386960:three_prime_UTR
CGGAGGAGACAAAGAAGGGT+CGG 0.615656 3_1:-90795092 Msa0386960:CDS
CCTCCGGCCGGTAATACCAC+CGG 0.617818 3_1:+90801673 None:intergenic
TCCTGCTTGTATAGACATGA+CGG 0.620123 3_1:-90793392 Msa0386960:CDS
ACTACCTAGGGAAACAGTGA+TGG 0.626362 3_1:+90792301 None:intergenic
CTAACGTTAAAGTTAACGTC+CGG 0.628228 3_1:-90801692 Msa0386960:CDS
ACTGCGTAACTTACTTACTG+TGG 0.632355 3_1:-90802241 None:intergenic
ACTGTTTCCCTAGGTAGTGG+AGG 0.634735 3_1:-90792296 Msa0386960:three_prime_UTR
TACAAGACTCGCAGATACAA+AGG 0.635448 3_1:-90799032 Msa0386960:intron
TGGCCGGAGGAGACAAAGAA+GGG 0.641254 3_1:-90795096 Msa0386960:CDS
AGTATGAACAAGGACCCGAT+GGG 0.641512 3_1:+90798016 None:intergenic
CAGAGTGTTGATACAATCGA+AGG 0.642499 3_1:-90795018 Msa0386960:CDS
AGGAGTGAGAGCACCAGTAG+CGG 0.642633 3_1:+90794909 None:intergenic
CGTCCGGTGGTATTACCGGC+CGG 0.645283 3_1:-90801676 Msa0386960:CDS
CTTACGTGGCAAAGATCGAA+GGG 0.647189 3_1:-90801737 Msa0386960:CDS
GCCGTCAAAGATGAAAGTGA+TGG 0.650227 3_1:-90792428 Msa0386960:exon
CCTCCGGCCAGTAGTACCAA+CGG 0.658998 3_1:+90795109 None:intergenic
TGCAAGACTCCCAAATACAA+AGG 0.662219 3_1:-90793284 Msa0386960:intron
AACACAACACAACACAACCA+TGG 0.662889 3_1:-90801960 Msa0386960:exon
TCCATCCAAACCCTCTTACG+TGG 0.664323 3_1:-90801751 Msa0386960:CDS
CCGGTGGTATTACCGGCCGG+AGG 0.671639 3_1:-90801673 Msa0386960:CDS
ACGTTAAAGTTAACGTCCGG+TGG 0.681208 3_1:-90801689 Msa0386960:CDS
TTGTATAGACATGACTGTGG+AGG 0.686994 3_1:-90799134 Msa0386960:CDS
GTATGAACAAGGACCCGATG+AGG 0.693701 3_1:+90792220 None:intergenic
GGGATCGAAGCTGATTCACG+AGG 0.707404 3_1:-90801717 Msa0386960:CDS
ACTGAACCATCAGATCATCA+GGG 0.710984 3_1:+90800669 None:intergenic
GCATGCGTTCCTCTAAACCG+TGG 0.713047 3_1:-90795191 Msa0386960:CDS
GTATGAACAAGGACCCGATG+GGG 0.713752 3_1:+90798017 None:intergenic
CCGTTGGTACTACTGGCCGG+AGG 0.722355 3_1:-90795109 Msa0386960:CDS
TGCTTGTATAGACATGACGG+TGG 0.750089 3_1:-90793389 Msa0386960:CDS
TGCTTGTATAGACATGACTG+TGG 0.776325 3_1:-90799137 Msa0386960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAATTTAGATTATGTTT+TGG - chr3_1:90793067-90793086 Msa0386960:intron 10.0%
!!! ATTTTATTACTTACTTTTAT+TGG - chr3_1:90795010-90795029 Msa0386960:CDS 10.0%
!! TCTTTATAATAACATAATAA+AGG + chr3_1:90795829-90795848 None:intergenic 10.0%
!! AAAATTAATGTGAAATTAAA+AGG - chr3_1:90796489-90796508 Msa0386960:intron 10.0%
!! AAATTAATGTGAAATTAAAA+GGG - chr3_1:90796490-90796509 Msa0386960:intron 10.0%
!! TTAAGATATACTTATAATAA+AGG - chr3_1:90797095-90797114 Msa0386960:intron 10.0%
!!! ATTTTTGTTTATATTAATGA+CGG + chr3_1:90797893-90797912 None:intergenic 10.0%
!!! CAAAAAAAAATTATAGTTTT+TGG - chr3_1:90798395-90798414 Msa0386960:intron 10.0%
!!! GAAAAAAAAATTATAGTTTT+TGG - chr3_1:90798486-90798505 Msa0386960:intron 10.0%
!!! GTAAAAAAAATTATAGTTTT+TGG + chr3_1:90798701-90798720 None:intergenic 10.0%
!!! AAAACTATAATTTTTTTTAC+AGG - chr3_1:90798701-90798720 Msa0386960:intron 10.0%
!!! AAACTATAATTTTTTTTACA+GGG - chr3_1:90798702-90798721 Msa0386960:intron 10.0%
!!! AAACTATAATTTTTTTTTAC+AGG - chr3_1:90798761-90798780 Msa0386960:intron 10.0%
!!! AACTATAATTTTTTTTTACA+GGG - chr3_1:90798762-90798781 Msa0386960:intron 10.0%
!! TATGGTTATTATTTAATTAA+GGG + chr3_1:90800575-90800594 None:intergenic 10.0%
!!! AAATTTTTCTTCTAAATAAA+AGG - chr3_1:90801850-90801869 Msa0386960:intron 10.0%
!!! TTTTTTTAAAATGACAAAAG+TGG + chr3_1:90793234-90793253 None:intergenic 15.0%
!!! AAACAATAATAATTCTAGTT+AGG - chr3_1:90794356-90794375 Msa0386960:intron 15.0%
!! CCATTTATATTCATTTAAAT+AGG + chr3_1:90794407-90794426 None:intergenic 15.0%
!! CCTATTTAAATGAATATAAA+TGG - chr3_1:90794404-90794423 Msa0386960:intron 15.0%
!! TATTTATAAACCATGATAAA+TGG - chr3_1:90795055-90795074 Msa0386960:CDS 15.0%
!!! GTAATTTTACTAATCAAATT+TGG + chr3_1:90797286-90797305 None:intergenic 15.0%
!!! TTTTACACTATTTTTTGTTA+AGG - chr3_1:90797468-90797487 Msa0386960:intron 15.0%
!!! TTTTTGATTGATTCATTAAA+TGG - chr3_1:90797918-90797937 Msa0386960:intron 15.0%
!!! AACTATAATTTTTTTTTGCA+GGG + chr3_1:90798643-90798662 None:intergenic 15.0%
!!! AAACTATAATTTTTTTTTGC+AGG + chr3_1:90798642-90798661 None:intergenic 15.0%
!!! AACTATAATTTTTTTTTCCA+GGG + chr3_1:90798484-90798503 None:intergenic 15.0%
!!! AAACTATAATTTTTTTTTCC+AGG + chr3_1:90798485-90798504 None:intergenic 15.0%
!!! ACTATAATTTTTTTTTTGCA+GGG + chr3_1:90798544-90798563 None:intergenic 15.0%
!!! AACTATAATTTTTTTTTTGC+AGG + chr3_1:90798545-90798564 None:intergenic 15.0%
!!! CAAAAATAAAAAATTTTGCA+GGG + chr3_1:90798574-90798593 None:intergenic 15.0%
!!! AAACTATAATTTTTTTTTGC+AGG - chr3_1:90798642-90798661 Msa0386960:intron 15.0%
!!! AACTATAATTTTTTTTTGCA+GGG - chr3_1:90798643-90798662 Msa0386960:intron 15.0%
!! AATAATAGGAAAATATGTAA+AGG + chr3_1:90799502-90799521 None:intergenic 15.0%
!! ATTGTAAAAAATAAAAGGAA+AGG - chr3_1:90800036-90800055 Msa0386960:intron 15.0%
!! ATAATTGAAATTCATTTGAA+CGG - chr3_1:90800227-90800246 Msa0386960:intron 15.0%
!!! ATTTTTTTTGACAAAATACA+CGG - chr3_1:90800357-90800376 Msa0386960:intron 15.0%
!! CAAATATAGAAAAAACTTAT+TGG - chr3_1:90800432-90800451 Msa0386960:intron 15.0%
!! CTATGGTTATTATTTAATTA+AGG + chr3_1:90800576-90800595 None:intergenic 15.0%
!!! GCAAATAAACTAATTTTTTA+TGG + chr3_1:90800815-90800834 None:intergenic 15.0%
!! TATTCTTATTCAAAATACAA+AGG + chr3_1:90801679-90801698 None:intergenic 15.0%
!! TATTTAGAAGAAAAATTTAC+AGG + chr3_1:90801848-90801867 None:intergenic 15.0%
!!! ATTGATGTTTATATTTTGTT+TGG - chr3_1:90801885-90801904 Msa0386960:CDS 15.0%
!! ATAGAAATAAAAGAAGGTTA+TGG + chr3_1:90792304-90792323 None:intergenic 20.0%
!! GAGAAAATAGAAATAAAAGA+AGG + chr3_1:90792310-90792329 None:intergenic 20.0%
!!! TAAAGATATGATTTTTGTGT+TGG - chr3_1:90792972-90792991 Msa0386960:intron 20.0%
!! TGTTATTGCAAAATAGAATT+TGG - chr3_1:90793149-90793168 Msa0386960:intron 20.0%
!! GTTATTGCAAAATAGAATTT+GGG - chr3_1:90793150-90793169 Msa0386960:intron 20.0%
!!! AGAAAACAAGTATTTTAAGT+CGG - chr3_1:90793869-90793888 Msa0386960:intron 20.0%
!! ATCAAAAGAAACATAATTCT+CGG + chr3_1:90794226-90794245 None:intergenic 20.0%
!! ATTATACTTGTAATTGTTCA+TGG - chr3_1:90794244-90794263 Msa0386960:intron 20.0%
!!! AGACAATAATAATTCTAGTT+AGG - chr3_1:90794293-90794312 Msa0386960:intron 20.0%
!! AAATATGCTCAAACAAATTA+AGG - chr3_1:90794679-90794698 Msa0386960:intron 20.0%
!! AATATGCTCAAACAAATTAA+GGG - chr3_1:90794680-90794699 Msa0386960:intron 20.0%
!! AAAATCTATCTTTCTATCTA+AGG + chr3_1:90794905-90794924 None:intergenic 20.0%
!! AATAAACAGTTTAACAAGTT+GGG + chr3_1:90794955-90794974 None:intergenic 20.0%
!! TAATAAACAGTTTAACAAGT+TGG + chr3_1:90794956-90794975 None:intergenic 20.0%
!! AAGTAATAAAATGTCATACA+AGG + chr3_1:90795002-90795021 None:intergenic 20.0%
!! TTCTATATGAGAATATAACT+AGG - chr3_1:90795514-90795533 Msa0386960:intron 20.0%
!! AACATAAATTAACCCAAAAA+AGG + chr3_1:90795657-90795676 None:intergenic 20.0%
!!! TGTTTTCTTGTAAATTTTTC+TGG - chr3_1:90795974-90795993 Msa0386960:intron 20.0%
!!! ATTAGTGCTTATATTTTGTT+TGG - chr3_1:90796019-90796038 Msa0386960:intron 20.0%
!!! TATATTTTGTTTGGTATTGT+AGG - chr3_1:90796028-90796047 Msa0386960:intron 20.0%
!!! ATTTCACATTAATTTTAGTG+TGG + chr3_1:90796485-90796504 None:intergenic 20.0%
!!! TATAAATGGAGTATCAAATA+TGG + chr3_1:90796548-90796567 None:intergenic 20.0%
!! ATTGCAATTACTTGTATAAA+TGG + chr3_1:90796562-90796581 None:intergenic 20.0%
!! AAATCAGATATTAACTTAGA+TGG + chr3_1:90796631-90796650 None:intergenic 20.0%
!!! ATTTTTTTTGTTTTTCTGTC+TGG + chr3_1:90796813-90796832 None:intergenic 20.0%
!! GAAAAACAAAAAAAATCCTT+TGG - chr3_1:90796817-90796836 Msa0386960:intron 20.0%
!!! GAATTCAAATCATTTTATAC+AGG + chr3_1:90797188-90797207 None:intergenic 20.0%
!!! ATGACTTATAAATATCGATT+AGG - chr3_1:90798070-90798089 Msa0386960:intron 20.0%
!!! TTGCAAAACGTTTTTTTTAA+AGG - chr3_1:90798182-90798201 Msa0386960:intron 20.0%
!!! TTTTTTTATAATTGGGTCAA+CGG - chr3_1:90798271-90798290 Msa0386960:intron 20.0%
!!! CCAAAAATAAAAAATTTTGC+AGG + chr3_1:90798575-90798594 None:intergenic 20.0%
!!! CCTGCAAAATTTTTTATTTT+TGG - chr3_1:90798572-90798591 Msa0386960:intron 20.0%
!!! TTATATTTTGTTTGTTTCAG+AGG - chr3_1:90799131-90799150 Msa0386960:CDS 20.0%
!!! TATATTTTGTTTGTTTCAGA+GGG - chr3_1:90799132-90799151 Msa0386960:CDS 20.0%
!!! TTCATTGCTCTAAAATTTAA+TGG - chr3_1:90799618-90799637 Msa0386960:intron 20.0%
!!! CATTTCAATGATGTTTTATT+TGG - chr3_1:90800089-90800108 Msa0386960:intron 20.0%
!! TAATTGAAATTCATTTGAAC+GGG - chr3_1:90800228-90800247 Msa0386960:intron 20.0%
!!! AAAATACACGGATTAATTAA+AGG - chr3_1:90800369-90800388 Msa0386960:intron 20.0%
!!! AAATACACGGATTAATTAAA+GGG - chr3_1:90800370-90800389 Msa0386960:intron 20.0%
!! AGATTACATTCACATTATAA+AGG + chr3_1:90800916-90800935 None:intergenic 20.0%
!! ATTAACTCAATCATACAAAA+CGG + chr3_1:90801653-90801672 None:intergenic 20.0%
!!! TATATTTTGTTTGGTATTGT+AGG - chr3_1:90796028-90796047 Msa0386960:intron 20.0%
!!! TACATTAGATATATAATGGA+CGG - chr3_1:90801954-90801973 Msa0386960:exon 20.0%
! GAAAAGAAAGATTGAATTGA+AGG + chr3_1:90792332-90792351 None:intergenic 25.0%
! AAAGAGAAAGAGAAAATTAG+AGG + chr3_1:90792528-90792547 None:intergenic 25.0%
!! TATGATTTTTGTGTTGGAAA+TGG - chr3_1:90792978-90792997 Msa0386960:intron 25.0%
!!! TTTTGGTTAATGACAACTTT+AGG - chr3_1:90793084-90793103 Msa0386960:intron 25.0%
! AAGGAGCAAATAATAGATTT+CGG + chr3_1:90793301-90793320 None:intergenic 25.0%
! TCAATCATAACATAATCCAA+GGG + chr3_1:90793487-90793506 None:intergenic 25.0%
! TTCAATCATAACATAATCCA+AGG + chr3_1:90793488-90793507 None:intergenic 25.0%
!!! TATGATTGAAGCATTTTGAT+TGG - chr3_1:90793498-90793517 Msa0386960:intron 25.0%
!! TTCATTGCTCAAATTTTTCA+TGG - chr3_1:90793635-90793654 Msa0386960:intron 25.0%
!! AACTCTTTCCTATGATATTT+TGG - chr3_1:90793930-90793949 Msa0386960:intron 25.0%
! TCAAAAGAAACATAATTCTC+GGG + chr3_1:90794225-90794244 None:intergenic 25.0%
!! CAATAATAATTCTAGTTAGG+TGG - chr3_1:90794296-90794315 Msa0386960:intron 25.0%
!! TAATTCTAGTTAGGTGATTA+TGG - chr3_1:90794365-90794384 Msa0386960:intron 25.0%
! TTCATTTAAATAGGCTAACT+GGG + chr3_1:90794398-90794417 None:intergenic 25.0%
! ATTCATTTAAATAGGCTAAC+TGG + chr3_1:90794399-90794418 None:intergenic 25.0%
! ACTACGAATTGAATATATGA+TGG - chr3_1:90794444-90794463 Msa0386960:intron 25.0%
! ATTGAACAAATTAACGTAGT+TGG - chr3_1:90794483-90794502 Msa0386960:intron 25.0%
! ATGCTTAAAATTCACTTGAA+TGG - chr3_1:90794590-90794609 Msa0386960:intron 25.0%
! TGCTTAAAATTCACTTGAAT+GGG - chr3_1:90794591-90794610 Msa0386960:intron 25.0%
!! GAAGAGGATTAATTCTTTTT+GGG - chr3_1:90794776-90794795 Msa0386960:intron 25.0%
!! AAGAGGATTAATTCTTTTTG+GGG - chr3_1:90794777-90794796 Msa0386960:intron 25.0%
!! CAAATCTTTTCCATTTATCA+TGG + chr3_1:90795068-90795087 None:intergenic 25.0%
! TGATAAATGGAAAAGATTTG+AGG - chr3_1:90795068-90795087 Msa0386960:CDS 25.0%
! AAGCATAATATTTGTGATTC+AGG - chr3_1:90795189-90795208 Msa0386960:CDS 25.0%
! AAGATATCAAAGATCTTAAG+TGG + chr3_1:90795427-90795446 None:intergenic 25.0%
! TCTAATAATACATCTTACAC+AGG + chr3_1:90795460-90795479 None:intergenic 25.0%
!!! AGATTATCTGTTTTTAGACT+TGG - chr3_1:90795477-90795496 Msa0386960:intron 25.0%
! ATAAATTAACCCAAAAAAGG+TGG + chr3_1:90795654-90795673 None:intergenic 25.0%
! GGTTAATTTATGTTTCTTCA+AGG - chr3_1:90795663-90795682 Msa0386960:intron 25.0%
!! TCAAGGTTAATGCTAATTTT+AGG - chr3_1:90795680-90795699 Msa0386960:intron 25.0%
! AAATGTAGACCAAATATAGT+GGG + chr3_1:90795793-90795812 None:intergenic 25.0%
! AAAATGTAGACCAAATATAG+TGG + chr3_1:90795794-90795813 None:intergenic 25.0%
! CTAATTTAAAAGTCTGTCAA+TGG - chr3_1:90796228-90796247 Msa0386960:intron 25.0%
!!! TTTTTGAGAATCAAACAAGT+TGG - chr3_1:90796599-90796618 Msa0386960:intron 25.0%
!!! TTTTGAGAATCAAACAAGTT+GGG - chr3_1:90796600-90796619 Msa0386960:intron 25.0%
! ATATTCCAGATAAAACATGT+CGG + chr3_1:90796785-90796804 None:intergenic 25.0%
!! AAAATATACAGTTTTGCCAA+AGG + chr3_1:90796836-90796855 None:intergenic 25.0%
! GTAATGAAAAAGTTAAGATG+AGG + chr3_1:90796952-90796971 None:intergenic 25.0%
! TACATATGCTAACACAAAAA+TGG + chr3_1:90797595-90797614 None:intergenic 25.0%
!! AGTTGTAATGAAAACTGTTT+TGG - chr3_1:90797639-90797658 Msa0386960:intron 25.0%
!! TTGTTTATATTAATGACGGA+GGG + chr3_1:90797889-90797908 None:intergenic 25.0%
! TTTGTTTATATTAATGACGG+AGG + chr3_1:90797890-90797909 None:intergenic 25.0%
!! GACAATAGTTAACTCTATTT+TGG - chr3_1:90798139-90798158 Msa0386960:intron 25.0%
!!! TCTTTTGTGTCAGTTTTTTT+TGG - chr3_1:90798222-90798241 Msa0386960:intron 25.0%
!! TCAAAGATGTTGAACTTTTT+GGG - chr3_1:90798318-90798337 Msa0386960:intron 25.0%
! ACAAAAAGTTGGCTAAAATA+TGG + chr3_1:90798826-90798845 None:intergenic 25.0%
!!! AGCCAACTTTTTGTTATAAT+TGG - chr3_1:90798832-90798851 Msa0386960:intron 25.0%
!!! GCCAACTTTTTGTTATAATT+GGG - chr3_1:90798833-90798852 Msa0386960:intron 25.0%
! ACCCAATTATAACAAAAAGT+TGG + chr3_1:90798837-90798856 None:intergenic 25.0%
! AACTTGATTAGAACTTACTA+CGG + chr3_1:90799020-90799039 None:intergenic 25.0%
!! AACTTAGAGAGTGTAATAAT+AGG + chr3_1:90799516-90799535 None:intergenic 25.0%
!!! CTTTTTTGTTACAATGAAGA+AGG - chr3_1:90799559-90799578 Msa0386960:intron 25.0%
! TTTCTGTGTAATTATTTCAG+TGG - chr3_1:90800298-90800317 Msa0386960:intron 25.0%
!! TAGAGAATCTTTCTTCTTTT+AGG - chr3_1:90800511-90800530 Msa0386960:intron 25.0%
!!! ATTTTTTATGGTTTGTGAAG+AGG + chr3_1:90800803-90800822 None:intergenic 25.0%
!! TTAGTTTATTTGCTAAACCA+TGG - chr3_1:90800822-90800841 Msa0386960:intron 25.0%
!! TATGTAAATCCTTTTCAAAC+AGG + chr3_1:90800876-90800895 None:intergenic 25.0%
! AATGAAGTTGTCAATTCTTT+CGG + chr3_1:90801000-90801019 None:intergenic 25.0%
!!! TTGCAACTTTTTTTGAACTT+CGG + chr3_1:90801039-90801058 None:intergenic 25.0%
! TTAGGAATACCTTTGTATTT+GGG + chr3_1:90801085-90801104 None:intergenic 25.0%
! CTGATACCATCTTAAAATTT+GGG + chr3_1:90801450-90801469 None:intergenic 25.0%
! TCTGATACCATCTTAAAATT+TGG + chr3_1:90801451-90801470 None:intergenic 25.0%
! TTAACTCAATCATACAAAAC+GGG + chr3_1:90801652-90801671 None:intergenic 25.0%
! TCTATTTCACATAAGTCATT+AGG + chr3_1:90801815-90801834 None:intergenic 25.0%
! GGTGTACATTAGATATATAA+TGG - chr3_1:90801950-90801969 Msa0386960:exon 25.0%
!!! ACATTAGATATATAATGGAC+GGG - chr3_1:90801955-90801974 Msa0386960:exon 25.0%
!!! ATGGTTTGAAATTTTGTCAA+TGG - chr3_1:90802024-90802043 Msa0386960:five_prime_UTR 25.0%
!!! TTTGAAATTTTGTCAATGGT+TGG - chr3_1:90802028-90802047 Msa0386960:five_prime_UTR 25.0%
! CAAACTCTTTGATAGTAAGT+TGG - chr3_1:90792167-90792186 Msa0386960:three_prime_UTR 30.0%
TAAAATGCTTTGTCTTTGAG+TGG + chr3_1:90792204-90792223 None:intergenic 30.0%
AAAAGAAGGTTATGGCAATT+TGG + chr3_1:90792296-90792315 None:intergenic 30.0%
AACAAATCTGTCACAATCAA+AGG - chr3_1:90792473-90792492 Msa0386960:intron 30.0%
!! TGATTTTTGTTTGTTTCAGC+TGG - chr3_1:90792556-90792575 Msa0386960:intron 30.0%
!! GATTTTTGTTTGTTTCAGCT+GGG - chr3_1:90792557-90792576 Msa0386960:intron 30.0%
!! ATTTTTGTTTGTTTCAGCTG+GGG - chr3_1:90792558-90792577 Msa0386960:intron 30.0%
! CCTAATAGCTTTCATTTTAG+AGG + chr3_1:90793267-90793286 None:intergenic 30.0%
!! CCTCTAAAATGAAAGCTATT+AGG - chr3_1:90793264-90793283 Msa0386960:intron 30.0%
CAATCATAACATAATCCAAG+GGG + chr3_1:90793486-90793505 None:intergenic 30.0%
TTCAACAATGGATCTTTATC+TGG - chr3_1:90793594-90793613 Msa0386960:intron 30.0%
!! TCAGTATCTGTTTGATTTTC+TGG - chr3_1:90793798-90793817 Msa0386960:intron 30.0%
!! ATACTTGTTTTCTTCACATG+AGG + chr3_1:90793862-90793881 None:intergenic 30.0%
!!! TCCTATGATATTTTGGTACT+TGG - chr3_1:90793937-90793956 Msa0386960:intron 30.0%
ACCAAGTACCAAAATATCAT+AGG + chr3_1:90793941-90793960 None:intergenic 30.0%
!!! TATGATATTTTGGTACTTGG+TGG - chr3_1:90793940-90793959 Msa0386960:intron 30.0%
AATTCTTAATAGCAGCTCAT+AGG - chr3_1:90793983-90794002 Msa0386960:intron 30.0%
TAGATATGTGTATGCTTGTT+TGG - chr3_1:90794175-90794194 Msa0386960:intron 30.0%
CATGGCATATGATATGATAT+AGG - chr3_1:90794262-90794281 Msa0386960:intron 30.0%
!! GTCATGTTATTTAGCTTTGT+TGG - chr3_1:90794318-90794337 Msa0386960:intron 30.0%
TCCACTTGGATAGATATTTA+CGG + chr3_1:90794653-90794672 None:intergenic 30.0%
GCATATTTCAAATATCCACT+TGG + chr3_1:90794667-90794686 None:intergenic 30.0%
TCAAACAAATTAAGGGTAAG+TGG - chr3_1:90794687-90794706 Msa0386960:intron 30.0%
! TAATGAAGATCTGAAATGCT+GGG - chr3_1:90794711-90794730 Msa0386960:intron 30.0%
!! GTTCTTTTTAGAAGAAGAAG+AGG - chr3_1:90794751-90794770 Msa0386960:intron 30.0%
! GGAAGAGGATTAATTCTTTT+TGG - chr3_1:90794775-90794794 Msa0386960:intron 30.0%
ATCTAGTCCTTTCTTATTCT+GGG - chr3_1:90794800-90794819 Msa0386960:intron 30.0%
ATCTTCTGTGTAATTATTCC+TGG - chr3_1:90794829-90794848 Msa0386960:intron 30.0%
TATTGGAGACATGATCAATT+TGG - chr3_1:90795027-90795046 Msa0386960:intron 30.0%
! ATGGAAAAGATTTGAGGTTT+CGG - chr3_1:90795074-90795093 Msa0386960:CDS 30.0%
TTTGCAAGAGACCTTTATAA+TGG - chr3_1:90795135-90795154 Msa0386960:CDS 30.0%
TTGCAAGAGACCTTTATAAT+GGG - chr3_1:90795136-90795155 Msa0386960:CDS 30.0%
AACAACTTTCACAAAAGAAG+TGG + chr3_1:90795265-90795284 None:intergenic 30.0%
TATGAGAATATAACTAGGCA+TGG - chr3_1:90795519-90795538 Msa0386960:intron 30.0%
!!! TATCTACTTCCACCTTTTTT+GGG - chr3_1:90795642-90795661 Msa0386960:intron 30.0%
! CCATATATGATTGTTTTCCA+TGG + chr3_1:90795913-90795932 None:intergenic 30.0%
CCATGGAAAACAATCATATA+TGG - chr3_1:90795910-90795929 Msa0386960:intron 30.0%
!! TTTTTCTGGTGACAAAAGAA+AGG - chr3_1:90795988-90796007 Msa0386960:intron 30.0%
!! ATTTTGTTTGGTATTGTAGG+TGG - chr3_1:90796031-90796050 Msa0386960:intron 30.0%
GTTATGTAAGGCTTAAAAAG+AGG - chr3_1:90796084-90796103 Msa0386960:intron 30.0%
AAAAAGAGGTAGATCTGTAA+TGG - chr3_1:90796098-90796117 Msa0386960:intron 30.0%
ATAGTCTTTCTCTACTTTCA+TGG - chr3_1:90796194-90796213 Msa0386960:intron 30.0%
TTTACTAAAGTAGTGTCTAC+TGG + chr3_1:90796401-90796420 None:intergenic 30.0%
AGTAGACACTACTTTAGTAA+AGG - chr3_1:90796400-90796419 Msa0386960:intron 30.0%
GAAATTAAAAGGGACAAAAC+TGG - chr3_1:90796500-90796519 Msa0386960:intron 30.0%
TTTGAGAATCAAACAAGTTG+GGG - chr3_1:90796601-90796620 Msa0386960:intron 30.0%
! TAAAACATGTCGGGATATTT+TGG + chr3_1:90796775-90796794 None:intergenic 30.0%
TATTCCAGATAAAACATGTC+GGG + chr3_1:90796784-90796803 None:intergenic 30.0%
TAACAGTCTTAATGACATAG+AGG + chr3_1:90796881-90796900 None:intergenic 30.0%
AATAAACTTAAGCGTGTTGA+GGG + chr3_1:90796974-90796993 None:intergenic 30.0%
TAATAAACTTAAGCGTGTTG+AGG + chr3_1:90796975-90796994 None:intergenic 30.0%
TGTCTGATACTTCATGTTTA+CGG - chr3_1:90797027-90797046 Msa0386960:intron 30.0%
TCACTAAAACATCACTTGAT+GGG + chr3_1:90797348-90797367 None:intergenic 30.0%
TTGATCTCCACTAAAAATGA+AGG - chr3_1:90797492-90797511 Msa0386960:intron 30.0%
TGTGTTAGCATATGTAACTA+TGG - chr3_1:90797599-90797618 Msa0386960:intron 30.0%
TTCACATATAACGTCAATGT+TGG + chr3_1:90797811-90797830 None:intergenic 30.0%
!! TTTTAATTGGGATTAACGGT+AGG + chr3_1:90797856-90797875 None:intergenic 30.0%
!! GCACTTTTAATTGGGATTAA+CGG + chr3_1:90797860-90797879 None:intergenic 30.0%
GATTCATTAAATGGTGTATG+TGG - chr3_1:90797927-90797946 Msa0386960:intron 30.0%
TTGTTTATAATAGTGACTGC+AGG - chr3_1:90797992-90798011 Msa0386960:intron 30.0%
TGTTTATAATAGTGACTGCA+GGG - chr3_1:90797993-90798012 Msa0386960:intron 30.0%
! GTCAAAGATGTTGAACTTTT+TGG - chr3_1:90798317-90798336 Msa0386960:intron 30.0%
!! GAACTTTTTGGGCTAAAATA+TGG - chr3_1:90798329-90798348 Msa0386960:intron 30.0%
TTTGGGCTAAAATATGGTAT+TGG - chr3_1:90798335-90798354 Msa0386960:intron 30.0%
!!! TTATTTTTGGAAATAGTCCC+TGG - chr3_1:90798585-90798604 Msa0386960:intron 30.0%
!!! TTGTCACTTTTGTGCATATT+GGG + chr3_1:90798612-90798631 None:intergenic 30.0%
!!! TTTGTCACTTTTGTGCATAT+TGG + chr3_1:90798613-90798632 None:intergenic 30.0%
AGTTGGCTAAAATATGGTAT+TGG + chr3_1:90798820-90798839 None:intergenic 30.0%
AAAACAACAAAGGTGATAAG+GGG + chr3_1:90798920-90798939 None:intergenic 30.0%
CAAAACAACAAAGGTGATAA+GGG + chr3_1:90798921-90798940 None:intergenic 30.0%
ACAAAACAACAAAGGTGATA+AGG + chr3_1:90798922-90798941 None:intergenic 30.0%
! AAGAGAGTACAAAACAACAA+AGG + chr3_1:90798930-90798949 None:intergenic 30.0%
! CTCTGATTAATTGTACTGAT+AGG - chr3_1:90799064-90799083 Msa0386960:CDS 30.0%
TTGTTTGAATTTCAGACTTC+TGG - chr3_1:90799774-90799793 Msa0386960:intron 30.0%
TTGTTCATGACATGTGATAT+AGG - chr3_1:90799841-90799860 Msa0386960:intron 30.0%
! AGACAACAATACTTCTAGTT+AGG - chr3_1:90799872-90799891 Msa0386960:intron 30.0%
!!! TGAGGGGTGTTTTTTTTTTT+GGG + chr3_1:90800700-90800719 None:intergenic 30.0%
!!! TTGAGGGGTGTTTTTTTTTT+TGG + chr3_1:90800701-90800720 None:intergenic 30.0%
! ATTTGCTAAACCATGGTAAA+TGG - chr3_1:90800829-90800848 Msa0386960:intron 30.0%
TTTGCTAAACCATGGTAAAT+GGG - chr3_1:90800830-90800849 Msa0386960:intron 30.0%
CAAATATTTCCCATTTACCA+TGG + chr3_1:90800842-90800861 None:intergenic 30.0%
TGGTAAATGGGAAATATTTG+AGG - chr3_1:90800842-90800861 Msa0386960:intron 30.0%
!! GTTTTAGTACCTGTTTGAAA+AGG - chr3_1:90800864-90800883 Msa0386960:intron 30.0%
CAGCATAATATTTGTGATTC+AGG - chr3_1:90800937-90800956 Msa0386960:intron 30.0%
GTTAGGAATACCTTTGTATT+TGG + chr3_1:90801086-90801105 None:intergenic 30.0%
CTAAAACTGTCAAACAATAG+TGG + chr3_1:90801108-90801127 None:intergenic 30.0%
!! GGTATTAAGTGTTGAAAACA+AGG + chr3_1:90801136-90801155 None:intergenic 30.0%
ACCATTTGAATTTACTTACC+TGG - chr3_1:90801153-90801172 Msa0386960:intron 30.0%
GATGAAGATATCAAAGATCT+CGG + chr3_1:90801182-90801201 None:intergenic 30.0%
TAATTCCTATTCCAATGTGT+TGG - chr3_1:90801220-90801239 Msa0386960:intron 30.0%
AATTTCCAACACATTGGAAT+AGG + chr3_1:90801228-90801247 None:intergenic 30.0%
AAACAGAATTTCCAACACAT+TGG + chr3_1:90801234-90801253 None:intergenic 30.0%
! ACCATCTTAAAATTTGGGTT+GGG + chr3_1:90801445-90801464 None:intergenic 30.0%
TACCATCTTAAAATTTGGGT+TGG + chr3_1:90801446-90801465 None:intergenic 30.0%
! CATAACACTTCAGGTTTATT+GGG + chr3_1:90801542-90801561 None:intergenic 30.0%
ATATATCCATATTTCTCAGC+TGG + chr3_1:90801717-90801736 None:intergenic 30.0%
GCTGAGAAATATGGATATAT+CGG - chr3_1:90801717-90801736 Msa0386960:CDS 30.0%
TATAAGATTGTGTCTTTCCA+TGG + chr3_1:90801764-90801783 None:intergenic 30.0%
!! ATTTTGTTTGGTATTGTAGG+TGG - chr3_1:90796031-90796050 Msa0386960:intron 30.0%
GAAAGTCTTAATGTGTATAC+TGG + chr3_1:90802204-90802223 None:intergenic 30.0%
! ATCAAAGAGTTTGACTTTCG+AGG + chr3_1:90792160-90792179 None:intergenic 35.0%
GTAGTTAAAGAGAAGTAGAG+GGG + chr3_1:90792274-90792293 None:intergenic 35.0%
GGTAGTTAAAGAGAAGTAGA+GGG + chr3_1:90792275-90792294 None:intergenic 35.0%
TGGTAGTTAAAGAGAAGTAG+AGG + chr3_1:90792276-90792295 None:intergenic 35.0%
CTAACGTTAAAGTTAACGTC+CGG - chr3_1:90792665-90792684 Msa0386960:intron 35.0%
! GAAGGAAAGTGTATTGTTCA+TGG - chr3_1:90792793-90792812 Msa0386960:intron 35.0%
TTTGAGTACAATTCTGCTAC+TGG - chr3_1:90792871-90792890 Msa0386960:intron 35.0%
CTATTATTTGCTCCTTCGAT+TGG - chr3_1:90793305-90793324 Msa0386960:CDS 35.0%
ATGGATCTTTATCTGGATTC+TGG - chr3_1:90793601-90793620 Msa0386960:intron 35.0%
! TTGCTCAAATTTTTCATGGC+AGG - chr3_1:90793639-90793658 Msa0386960:intron 35.0%
TTTAAGTCGGCATTAACCAT+AGG - chr3_1:90793882-90793901 Msa0386960:intron 35.0%
AAGGAAAAATGATGCTCCTA+TGG + chr3_1:90793901-90793920 None:intergenic 35.0%
GTCCTGTATAAGAAGAACAA+GGG + chr3_1:90794129-90794148 None:intergenic 35.0%
AGTCCTGTATAAGAAGAACA+AGG + chr3_1:90794130-90794149 None:intergenic 35.0%
GTGTATGCTTGTTTGGATTA+TGG - chr3_1:90794182-90794201 Msa0386960:intron 35.0%
AGAAATAAGCAATGAGACAC+CGG + chr3_1:90794532-90794551 None:intergenic 35.0%
CCACTTGGATAGATATTTAC+GGG + chr3_1:90794652-90794671 None:intergenic 35.0%
! CTAATGAAGATCTGAAATGC+TGG - chr3_1:90794710-90794729 Msa0386960:intron 35.0%
!! CTTTTTAGAAGAAGAAGAGG+AGG - chr3_1:90794754-90794773 Msa0386960:intron 35.0%
GATCTAGTCCTTTCTTATTC+TGG - chr3_1:90794799-90794818 Msa0386960:intron 35.0%
TTCTGTGTAATTATTCCTGG+TGG - chr3_1:90794832-90794851 Msa0386960:intron 35.0%
! CTTTAATTAGTCTGTGCATG+TGG + chr3_1:90794877-90794896 None:intergenic 35.0%
CTGTTGTGACAAACTTAATG+TGG - chr3_1:90794925-90794944 Msa0386960:CDS 35.0%
TGCAAGAGACCTTTATAATG+GGG - chr3_1:90795137-90795156 Msa0386960:CDS 35.0%
! ACCTTTATAATGGGGATATC+AGG - chr3_1:90795145-90795164 Msa0386960:CDS 35.0%
AAAGAAGTGGTCAAGTCTTT+CGG + chr3_1:90795252-90795271 None:intergenic 35.0%
CTCATACTATCAAACAACAG+TGG + chr3_1:90795362-90795381 None:intergenic 35.0%
ATCAAAGATCTTAAGTGGTC+AGG + chr3_1:90795422-90795441 None:intergenic 35.0%
!!! GTATCTACTTCCACCTTTTT+TGG - chr3_1:90795641-90795660 Msa0386960:intron 35.0%
GAAGCTTTGCCTACTTTAAT+GGG + chr3_1:90795738-90795757 None:intergenic 35.0%
CAAAAGTCTGAGTATGAACA+AGG + chr3_1:90796354-90796373 None:intergenic 35.0%
! TTGAGAATCAAACAAGTTGG+GGG - chr3_1:90796602-90796621 Msa0386960:intron 35.0%
CTTATAGAGCATATCTAGCA+TGG - chr3_1:90796680-90796699 Msa0386960:intron 35.0%
ATCTAGCATGGAGAAATTAG+TGG - chr3_1:90796692-90796711 Msa0386960:intron 35.0%
! GGGTAATTTCAGATTTTCGA+GGG + chr3_1:90796747-90796766 None:intergenic 35.0%
! GAAAATCTGAAATTACCCGT+TGG - chr3_1:90796749-90796768 Msa0386960:intron 35.0%
! ATATCCCGACATGTTTTATC+TGG - chr3_1:90796777-90796796 Msa0386960:intron 35.0%
! ATATTTTGCTCATCCAGATG+TGG - chr3_1:90796849-90796868 Msa0386960:intron 35.0%
! AGTAACTCACTCGTGTATTT+TGG + chr3_1:90797217-90797236 None:intergenic 35.0%
CTCACTAAAACATCACTTGA+TGG + chr3_1:90797349-90797368 None:intergenic 35.0%
ACACACACACATTTCAGTTT+AGG - chr3_1:90797399-90797418 Msa0386960:intron 35.0%
ATCTCCACTAAAAATGAAGG+AGG - chr3_1:90797495-90797514 Msa0386960:intron 35.0%
!! TGATCCTCCTTCATTTTTAG+TGG + chr3_1:90797502-90797521 None:intergenic 35.0%
AAGGAGGATCAACTGAAATT+AGG - chr3_1:90797511-90797530 Msa0386960:intron 35.0%
ATGCTAACACAAAAATGGCA+TGG + chr3_1:90797590-90797609 None:intergenic 35.0%
!! GTATGGTTGATGAATCAGAT+TGG - chr3_1:90797672-90797691 Msa0386960:intron 35.0%
GATTGCAAATACAGATCAAG+TGG - chr3_1:90797766-90797785 Msa0386960:intron 35.0%
!! GGTGTAGAGCACTTTTAATT+GGG + chr3_1:90797868-90797887 None:intergenic 35.0%
! ATTTTGGATTGTAAAAGCCG+TGG - chr3_1:90798155-90798174 Msa0386960:intron 35.0%
! AAACGTTTTGCAAAAGACCA+CGG + chr3_1:90798175-90798194 None:intergenic 35.0%
!!! AAATAGGCCAGTTTTGGTTT+TGG - chr3_1:90798366-90798385 Msa0386960:intron 35.0%
!!! AAATAGGCCAGTTTTGGTTT+TGG - chr3_1:90798366-90798385 Msa0386960:intron 35.0%
! CAAAACTGACCTATTTTGCA+GGG + chr3_1:90798513-90798532 None:intergenic 35.0%
!!! TGTCACTTTTGTGCATATTG+GGG + chr3_1:90798611-90798630 None:intergenic 35.0%
!! CAAAACTGGCCTATTTTGTA+GGG - chr3_1:90798674-90798693 Msa0386960:intron 35.0%
!!! GTTTTTGGTCCCTACAAAAT+AGG + chr3_1:90798686-90798705 None:intergenic 35.0%
!! CAAAACTGGTCTATTTTGCA+GGG - chr3_1:90798733-90798752 Msa0386960:intron 35.0%
!!! AAATAGGCCAGTTTTGGTTT+TGG + chr3_1:90798366-90798385 None:intergenic 35.0%
AACGGCATATCTGAATTCAT+TGG + chr3_1:90798997-90799016 None:intergenic 35.0%
GATTAGAACTTACTACGGAA+CGG + chr3_1:90799015-90799034 None:intergenic 35.0%
AAAATGCACTGTTCACAGTT+TGG - chr3_1:90799362-90799381 Msa0386960:intron 35.0%
TACATGAAGCTTGATGTTGT+TGG - chr3_1:90799390-90799409 Msa0386960:intron 35.0%
ACTCACACTTGAACTATATC+AGG + chr3_1:90799471-90799490 None:intergenic 35.0%
TTGTTACAATGAAGAAGGTG+TGG - chr3_1:90799564-90799583 Msa0386960:intron 35.0%
! TGTTACAATGAAGAAGGTGT+GGG - chr3_1:90799565-90799584 Msa0386960:intron 35.0%
ATAACTTCATCAGGGTTGTA+GGG + chr3_1:90799666-90799685 None:intergenic 35.0%
ACTGGATCATAACTTCATCA+GGG + chr3_1:90799674-90799693 None:intergenic 35.0%
GAACTGTATAAGCAGAACAA+GGG + chr3_1:90799729-90799748 None:intergenic 35.0%
AGAACTGTATAAGCAGAACA+AGG + chr3_1:90799730-90799749 None:intergenic 35.0%
! CAACAATACTTCTAGTTAGG+TGG - chr3_1:90799875-90799894 Msa0386960:intron 35.0%
ATATGTCGTGCTAAAGTTCA+TGG - chr3_1:90799916-90799935 Msa0386960:intron 35.0%
CTTAGAGCTAAGGAAGAAAT+TGG + chr3_1:90800263-90800282 None:intergenic 35.0%
!! CAATTTCTTCCTTAGCTCTA+AGG - chr3_1:90800261-90800280 Msa0386960:intron 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG + chr3_1:90800411-90800430 None:intergenic 35.0%
!! AATCATTAACTTGTGCCTTG+AGG + chr3_1:90800412-90800431 None:intergenic 35.0%
!! AGTGTTAACTTGTGTCCTTA+GGG + chr3_1:90800551-90800570 None:intergenic 35.0%
!! TAGTGTTAACTTGTGTCCTT+AGG + chr3_1:90800552-90800571 None:intergenic 35.0%
!! TTTGGTGGGTTATCTATCTA+TGG + chr3_1:90800593-90800612 None:intergenic 35.0%
!! TTTTTAGGGGTGATGAGTTT+TGG + chr3_1:90800611-90800630 None:intergenic 35.0%
!! ACAATGCTTGCTTTTGTGAA+GGG + chr3_1:90800639-90800658 None:intergenic 35.0%
!! AACAATGCTTGCTTTTGTGA+AGG + chr3_1:90800640-90800659 None:intergenic 35.0%
!!! GAGGGGTGTTTTTTTTTTTG+GGG + chr3_1:90800699-90800718 None:intergenic 35.0%
ACTGTCAAACAATAGTGGTT+AGG + chr3_1:90801103-90801122 None:intergenic 35.0%
GCCAGGTAAGTAAATTCAAA+TGG + chr3_1:90801157-90801176 None:intergenic 35.0%
TGGCATATGCAGTGTTTATA+AGG - chr3_1:90801375-90801394 Msa0386960:intron 35.0%
TATGCAGTGTTTATAAGGCT+TGG - chr3_1:90801380-90801399 Msa0386960:intron 35.0%
ATGCAGTGTTTATAAGGCTT+GGG - chr3_1:90801381-90801400 Msa0386960:intron 35.0%
!!! GTTACCTTACTGGTTTTGTT+AGG - chr3_1:90801409-90801428 Msa0386960:intron 35.0%
TCAACCTAACAAAACCAGTA+AGG + chr3_1:90801416-90801435 None:intergenic 35.0%
AGCCTATCTTATATCTGTTG+TGG - chr3_1:90801470-90801489 Msa0386960:CDS 35.0%
AGCCACAACAGATATAAGAT+AGG + chr3_1:90801475-90801494 None:intergenic 35.0%
AGGTTTATTGGGATAACACT+CGG + chr3_1:90801531-90801550 None:intergenic 35.0%
! CCATAACACTTCAGGTTTAT+TGG + chr3_1:90801543-90801562 None:intergenic 35.0%
! CCAATAAACCTGAAGTGTTA+TGG - chr3_1:90801540-90801559 Msa0386960:CDS 35.0%
! ATAAACCTGAAGTGTTATGG+TGG - chr3_1:90801543-90801562 Msa0386960:CDS 35.0%
GCAACACAAATGCCTTAATT+AGG + chr3_1:90801602-90801621 None:intergenic 35.0%
ACCATCACTTTCATCTTTGA+CGG + chr3_1:90801933-90801952 None:intergenic 35.0%
ACCAAGGATTTGAAAAGCTA+GGG + chr3_1:90801982-90802001 None:intergenic 35.0%
TACCAAGGATTTGAAAAGCT+AGG + chr3_1:90801983-90802002 None:intergenic 35.0%
! TAGCTTTTCAAATCCTTGGT+AGG - chr3_1:90801982-90802001 Msa0386960:five_prime_UTR 35.0%
AGCTGAATAAACTCTGACAA+TGG - chr3_1:90802005-90802024 Msa0386960:five_prime_UTR 35.0%
GTTTCTCCATATATCCTCAT+CGG - chr3_1:90802123-90802142 Msa0386960:five_prime_UTR 35.0%
TTTCTCCATATATCCTCATC+GGG - chr3_1:90802124-90802143 Msa0386960:five_prime_UTR 35.0%
CAAAAGTCTGAGTATGAACA+AGG + chr3_1:90796354-90796373 None:intergenic 35.0%
AACACAACACAACACAACCA+TGG - chr3_1:90792397-90792416 Msa0386960:three_prime_UTR 40.0%
ATGACTCTAGGTTTCGCTTT+GGG + chr3_1:90792436-90792455 None:intergenic 40.0%
TATGACTCTAGGTTTCGCTT+TGG + chr3_1:90792437-90792456 None:intergenic 40.0%
GTTTGACTGAGTATGACTCT+AGG + chr3_1:90792448-90792467 None:intergenic 40.0%
!! CAGAGTGCTGATACAATTGA+AGG - chr3_1:90792775-90792794 Msa0386960:intron 40.0%
TACACTAAGCTTGATGCTGT+TGG - chr3_1:90792826-90792845 Msa0386960:intron 40.0%
AGGTTTCATTCTCCAATCGA+AGG + chr3_1:90793320-90793339 None:intergenic 40.0%
! TACAGAGTTGATCACCTGAA+TGG - chr3_1:90793363-90793382 Msa0386960:CDS 40.0%
AAGAAGGATCATCACCATTC+AGG + chr3_1:90793380-90793399 None:intergenic 40.0%
ATCCTTCTTCTCCAATGCAA+AGG - chr3_1:90793391-90793410 Msa0386960:CDS 40.0%
TCCTTCTTCTCCAATGCAAA+GGG - chr3_1:90793392-90793411 Msa0386960:CDS 40.0%
TGAACTGAGGATAAGGATGA+TGG + chr3_1:90793530-90793549 None:intergenic 40.0%
CATCCAAATCAGGTTTACAG+CGG + chr3_1:90793556-90793575 None:intergenic 40.0%
!! CTGTAAACCTGATTTGGATG+AGG - chr3_1:90793556-90793575 Msa0386960:intron 40.0%
ATCAGATCATCAGGGTTGTA+GGG + chr3_1:90793683-90793702 None:intergenic 40.0%
ACTGAACCATCAGATCATCA+GGG + chr3_1:90793691-90793710 None:intergenic 40.0%
TTTCTGGACTCTTGTATGTC+TGG - chr3_1:90793814-90793833 Msa0386960:intron 40.0%
GGAAAGAGTTGTCTTACTCA+AGG + chr3_1:90793920-90793939 None:intergenic 40.0%
!! GATTCTGCTTTGTTTCCTTC+TGG - chr3_1:90794036-90794055 Msa0386960:intron 40.0%
TAAGAAGAACAAGGGAGAGT+AGG + chr3_1:90794121-90794140 None:intergenic 40.0%
CTCCCTTGTTCTTCTTATAC+AGG - chr3_1:90794124-90794143 Msa0386960:intron 40.0%
GCATGACATTTCTTTCACAC+TGG - chr3_1:90794505-90794524 Msa0386960:intron 40.0%
ACATTTCTTTCACACTGGTC+CGG - chr3_1:90794510-90794529 Msa0386960:intron 40.0%
GATAGATATTTACGGGACCT+CGG + chr3_1:90794645-90794664 None:intergenic 40.0%
CCCGTAAATATCTATCCAAG+TGG - chr3_1:90794649-90794668 Msa0386960:intron 40.0%
AAATGCTGGGAAAGATTCAG+AGG - chr3_1:90794724-90794743 Msa0386960:intron 40.0%
TAGTCCTTTCTTATTCTGGG+AGG - chr3_1:90794803-90794822 Msa0386960:intron 40.0%
! AGTCCTTTCTTATTCTGGGA+GGG - chr3_1:90794804-90794823 Msa0386960:intron 40.0%
GGAGACATGATCAATTTGGA+TGG - chr3_1:90795031-90795050 Msa0386960:intron 40.0%
CATATAAACCCTCATCGAAC+AGG + chr3_1:90795102-90795121 None:intergenic 40.0%
GCCTGATATCCCCATTATAA+AGG + chr3_1:90795149-90795168 None:intergenic 40.0%
ACAGTCATGTCTATACAAGC+AGG + chr3_1:90795221-90795240 None:intergenic 40.0%
TGCTTGTATAGACATGACTG+TGG - chr3_1:90795220-90795239 Msa0386960:intron 40.0%
TTGTATAGACATGACTGTGG+AGG - chr3_1:90795223-90795242 Msa0386960:intron 40.0%
TGTGAAAGTTGTTCCGTTGA+AGG - chr3_1:90795272-90795291 Msa0386960:intron 40.0%
!!! CAGCTGTTTTTGACCTTCAA+CGG + chr3_1:90795288-90795307 None:intergenic 40.0%
TACAAGACTCGCAGATACAA+AGG - chr3_1:90795325-90795344 Msa0386960:intron 40.0%
CTTAAGCTGCCCATTAAAGT+AGG - chr3_1:90795726-90795745 Msa0386960:intron 40.0%
CGAAGCTTTGCCTACTTTAA+TGG + chr3_1:90795739-90795758 None:intergenic 40.0%
ATATCTGCATGCTTCTCCTT+AGG - chr3_1:90795882-90795901 Msa0386960:intron 40.0%
CATAACATCGCTTCTACCTT+CGG + chr3_1:90796070-90796089 None:intergenic 40.0%
GGTAGAAGCGATGTTATGTA+AGG - chr3_1:90796072-90796091 Msa0386960:intron 40.0%
AAGAGGTAGATCTGTAATGG+AGG - chr3_1:90796101-90796120 Msa0386960:intron 40.0%
! AGAGGTAGATCTGTAATGGA+GGG - chr3_1:90796102-90796121 Msa0386960:intron 40.0%
!! ACCCTTGCTTTTGTAATCCT+GGG - chr3_1:90796126-90796145 Msa0386960:intron 40.0%
ACCCAGGATTACAAAAGCAA+GGG + chr3_1:90796130-90796149 None:intergenic 40.0%
TACCCAGGATTACAAAAGCA+AGG + chr3_1:90796131-90796150 None:intergenic 40.0%
!! TTGCTTTTGTAATCCTGGGT+AGG - chr3_1:90796130-90796149 Msa0386960:intron 40.0%
CTGAACAAACTCTGTGACAA+TGG - chr3_1:90796155-90796174 Msa0386960:intron 40.0%
GATTCTCTATCTATCCCCAT+CGG - chr3_1:90796326-90796345 Msa0386960:intron 40.0%
ATTCTCTATCTATCCCCATC+GGG - chr3_1:90796327-90796346 Msa0386960:intron 40.0%
TACTTGACACGCTGCTAATT+TGG - chr3_1:90796651-90796670 Msa0386960:intron 40.0%
! CGGGTAATTTCAGATTTTCG+AGG + chr3_1:90796748-90796767 None:intergenic 40.0%
AAATGGCATGGATCATGTTG+TGG + chr3_1:90797578-90797597 None:intergenic 40.0%
!!! AAACTGTTTTGGTCCTACGT+TGG - chr3_1:90797650-90797669 Msa0386960:intron 40.0%
TTCATCAACCATACCAACGT+AGG + chr3_1:90797666-90797685 None:intergenic 40.0%
!! GGGTGTAGAGCACTTTTAAT+TGG + chr3_1:90797869-90797888 None:intergenic 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG + chr3_1:90798793-90798812 None:intergenic 40.0%
!!! GTTTTTGGTCCCTGCAAAAT+AGG - chr3_1:90798410-90798429 Msa0386960:intron 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG + chr3_1:90798793-90798812 None:intergenic 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG + chr3_1:90798793-90798812 None:intergenic 40.0%
!!! GTTTTTGGTCCCTGCAAAAT+AGG - chr3_1:90798410-90798429 Msa0386960:intron 40.0%
! CCAAAACTGACCTATTTTGC+AGG + chr3_1:90798514-90798533 None:intergenic 40.0%
! CCTGCAAAATAGGTCAGTTT+TGG - chr3_1:90798511-90798530 Msa0386960:intron 40.0%
! CCTACAAAATAGGCCAGTTT+TGG + chr3_1:90798676-90798695 None:intergenic 40.0%
!! CCAAAACTGGCCTATTTTGT+AGG - chr3_1:90798673-90798692 Msa0386960:intron 40.0%
ACAGGGACTAAAACCAAAAC+TGG - chr3_1:90798719-90798738 Msa0386960:intron 40.0%
! CCTGCAAAATAGACCAGTTT+TGG + chr3_1:90798735-90798754 None:intergenic 40.0%
!! CCAAAACTGGTCTATTTTGC+AGG - chr3_1:90798732-90798751 Msa0386960:intron 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG - chr3_1:90798793-90798812 Msa0386960:intron 40.0%
TCGATCATAGCCACATATGT+TGG + chr3_1:90799195-90799214 None:intergenic 40.0%
!! CAGAGTGTTGATACAATCGA+AGG - chr3_1:90799339-90799358 Msa0386960:intron 40.0%
TTGAACTACAATTCCGCTAC+TGG - chr3_1:90799435-90799454 Msa0386960:intron 40.0%
CATAACTTCATCAGGGTTGT+AGG + chr3_1:90799667-90799686 None:intergenic 40.0%
CACTGGATCATAACTTCATC+AGG + chr3_1:90799675-90799694 None:intergenic 40.0%
GAATCAGCAGATTGTACGAT+TGG - chr3_1:90799951-90799970 Msa0386960:intron 40.0%
AGAAGTAATGAGACACCAGA+CGG + chr3_1:90800163-90800182 None:intergenic 40.0%
CTCAAGTAGTAGCACATACA+CGG - chr3_1:90800324-90800343 Msa0386960:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - chr3_1:90800394-90800413 Msa0386960:intron 40.0%
GTTTCTTAACATGTGCCCTA+AGG - chr3_1:90800533-90800552 Msa0386960:intron 40.0%
!!! TGTGAAGGGGTCTGTTTTTA+GGG + chr3_1:90800625-90800644 None:intergenic 40.0%
!! TTGTGAAGGGGTCTGTTTTT+AGG + chr3_1:90800626-90800645 None:intergenic 40.0%
!! CAATGCTTGCTTTTGTGAAG+GGG + chr3_1:90800638-90800657 None:intergenic 40.0%
ACCCCTCAAAATAAAACACC+CGG - chr3_1:90800712-90800731 Msa0386960:intron 40.0%
!!! ACCGGGTGTTTTATTTTGAG+GGG + chr3_1:90800716-90800735 None:intergenic 40.0%
!!! GACCGGGTGTTTTATTTTGA+GGG + chr3_1:90800717-90800736 None:intergenic 40.0%
TCCTTAGGATAAGTGCTCTT+CGG + chr3_1:90800763-90800782 None:intergenic 40.0%
! TATGGTTTGTGAAGAGGTGT+GGG + chr3_1:90800797-90800816 None:intergenic 40.0%
! TTATGGTTTGTGAAGAGGTG+TGG + chr3_1:90800798-90800817 None:intergenic 40.0%
TCCTGCTTGTATAGACATGA+CGG - chr3_1:90795217-90795236 Msa0386960:intron 40.0%
TGCAAGACTCCCAAATACAA+AGG - chr3_1:90801073-90801092 Msa0386960:intron 40.0%
GAAGATATCAAAGATCTCGG+AGG + chr3_1:90801179-90801198 None:intergenic 40.0%
!! GCCCAACCCAAATTTTAAGA+TGG - chr3_1:90801441-90801460 Msa0386960:intron 40.0%
GTCTACACTTCAGGCTTATT+GGG - chr3_1:90801504-90801523 Msa0386960:CDS 40.0%
ACTTTCCACCATAACACTTC+AGG + chr3_1:90801551-90801570 None:intergenic 40.0%
ATGCCTTAATTAGGCAGCTA+GGG + chr3_1:90801593-90801612 None:intergenic 40.0%
AATGCCTTAATTAGGCAGCT+AGG + chr3_1:90801594-90801613 None:intergenic 40.0%
! ATCATACAAAACGGGCTTGA+GGG + chr3_1:90801644-90801663 None:intergenic 40.0%
! AATCATACAAAACGGGCTTG+AGG + chr3_1:90801645-90801664 None:intergenic 40.0%
GTTTGACCAGCTGAGAAATA+TGG - chr3_1:90801708-90801727 Msa0386960:CDS 40.0%
ATATCGGCATGCTTCTCTAT+AGG - chr3_1:90801733-90801752 Msa0386960:CDS 40.0%
!! ACCCTAGCTTTTCAAATCCT+TGG - chr3_1:90801978-90801997 Msa0386960:five_prime_UTR 40.0%
AGTTTATTCAGCTCCTACCA+AGG + chr3_1:90801998-90802017 None:intergenic 40.0%
TATTCACCAGTGAATCGTGT+TGG - chr3_1:90802224-90802243 Msa0386960:five_prime_UTR 40.0%
TGCTTTGTCTTTGAGTGGCA+TGG + chr3_1:90792199-90792218 None:intergenic 45.0%
CGTGTGCTTTACACATCACA+CGG + chr3_1:90792233-90792252 None:intergenic 45.0%
AGAGAAGTAGAGGGGTTTGT+TGG + chr3_1:90792266-90792285 None:intergenic 45.0%
TGACTCTAGGTTTCGCTTTG+GGG + chr3_1:90792435-90792454 None:intergenic 45.0%
TCGATCTTTGCCACGTAAGA+GGG + chr3_1:90792619-90792638 None:intergenic 45.0%
TTCGATCTTTGCCACGTAAG+AGG + chr3_1:90792620-90792639 None:intergenic 45.0%
TCTTACGTGGCAAAGATCGA+AGG - chr3_1:90792619-90792638 Msa0386960:intron 45.0%
CTTACGTGGCAAAGATCGAA+GGG - chr3_1:90792620-90792639 Msa0386960:intron 45.0%
ACGTTAAAGTTAACGTCCGG+TGG - chr3_1:90792668-90792687 Msa0386960:intron 45.0%
TTAACGTCCGGTGGTATTAC+CGG - chr3_1:90792677-90792696 Msa0386960:intron 45.0%
TTGAACCGTGAAACTGTCTC+CGG + chr3_1:90792723-90792742 None:intergenic 45.0%
GAGACAGTTTCACGGTTCAA+AGG - chr3_1:90792723-90792742 Msa0386960:intron 45.0%
ACTCACACTGCAACTCTATC+AGG + chr3_1:90792907-90792926 None:intergenic 45.0%
GTGATCAACTCTGTATTCCG+AGG + chr3_1:90793358-90793377 None:intergenic 45.0%
CCTTCTTCTCCAATGCAAAG+GGG - chr3_1:90793393-90793412 Msa0386960:CDS 45.0%
AAGTGTCTACCCCTTTGCAT+TGG + chr3_1:90793405-90793424 None:intergenic 45.0%
GACACTTCGATGTCAAAGTG+AGG - chr3_1:90793418-90793437 Msa0386960:intron 45.0%
TTCGATGTCAAAGTGAGGCA+GGG - chr3_1:90793423-90793442 Msa0386960:intron 45.0%
CTCTAGTCCTCATCCAAATC+AGG + chr3_1:90793566-90793585 None:intergenic 45.0%
CATCAGATCATCAGGGTTGT+AGG + chr3_1:90793684-90793703 None:intergenic 45.0%
CTACAACCCTGATGATCTGA+TGG - chr3_1:90793682-90793701 Msa0386960:intron 45.0%
CACTGAACCATCAGATCATC+AGG + chr3_1:90793692-90793711 None:intergenic 45.0%
TGATCTGATGGTTCAGTGTG+AGG - chr3_1:90793694-90793713 Msa0386960:intron 45.0%
GATCTGATGGTTCAGTGTGA+GGG - chr3_1:90793695-90793714 Msa0386960:intron 45.0%
!! CTCTTGTATGTCTGGTTCTG+TGG - chr3_1:90793822-90793841 Msa0386960:intron 45.0%
AACAAGGGAGAGTAGGTTTG+GGG + chr3_1:90794114-90794133 None:intergenic 45.0%
GAACAAGGGAGAGTAGGTTT+GGG + chr3_1:90794115-90794134 None:intergenic 45.0%
AGAACAAGGGAGAGTAGGTT+TGG + chr3_1:90794116-90794135 None:intergenic 45.0%
CTCGGAGTTAAGGCAGAATT+TGG + chr3_1:90794627-90794646 None:intergenic 45.0%
CAAATTCTGCCTTAACTCCG+AGG - chr3_1:90794625-90794644 Msa0386960:intron 45.0%
AGAAGAAGAAGAGGAGGAAG+AGG - chr3_1:90794760-90794779 Msa0386960:intron 45.0%
! GTCCTTTCTTATTCTGGGAG+GGG - chr3_1:90794805-90794824 Msa0386960:intron 45.0%
TTCCCCTCCCAGAATAAGAA+AGG + chr3_1:90794810-90794829 None:intergenic 45.0%
TTTCGGTACCTGTTCGATGA+GGG - chr3_1:90795091-90795110 Msa0386960:CDS 45.0%
TGCTTGAATGCCTAATGAGC+AGG - chr3_1:90795767-90795786 Msa0386960:intron 45.0%
!! ATATAGTGGGCCTGCTCATT+AGG + chr3_1:90795780-90795799 None:intergenic 45.0%
ATGAGCAGGCCCACTATATT+TGG - chr3_1:90795781-90795800 Msa0386960:intron 45.0%
! GTTTTCCATGGCTATGCCTA+AGG + chr3_1:90795901-90795920 None:intergenic 45.0%
! GAGGTAGATCTGTAATGGAG+GGG - chr3_1:90796103-90796122 Msa0386960:intron 45.0%
!! GACCCTTGCTTTTGTAATCC+TGG - chr3_1:90796125-90796144 Msa0386960:intron 45.0%
AGTATCATCCCTGTTTCCCT+TGG - chr3_1:90796255-90796274 Msa0386960:intron 45.0%
AACACATCCTCCACTTCCAA+GGG + chr3_1:90796274-90796293 None:intergenic 45.0%
AAACACATCCTCCACTTCCA+AGG + chr3_1:90796275-90796294 None:intergenic 45.0%
AGTATGAACAAGGACCCGAT+GGG + chr3_1:90796344-90796363 None:intergenic 45.0%
GATGTCATCGTGTTCGTAGT+TGG - chr3_1:90796446-90796465 Msa0386960:intron 45.0%
TTTCGAGGGTCACTAGAACT+GGG + chr3_1:90796733-90796752 None:intergenic 45.0%
!! TTTTCGAGGGTCACTAGAAC+TGG + chr3_1:90796734-90796753 None:intergenic 45.0%
!!! TGTCGGGATATTTTGGCCAA+CGG + chr3_1:90796768-90796787 None:intergenic 45.0%
ATAGAGGATGATGCCACATC+TGG + chr3_1:90796865-90796884 None:intergenic 45.0%
! CTACTCCATAGTTGAGTTGC+AGG - chr3_1:90797053-90797072 Msa0386960:intron 45.0%
TACCTCCTGCAACTCAACTA+TGG + chr3_1:90797061-90797080 None:intergenic 45.0%
!! GTTTTGGTCCTACGTTGGTA+TGG - chr3_1:90797655-90797674 Msa0386960:intron 45.0%
!! GGTATTGGTCCCTGCAAAAT+AGG - chr3_1:90798350-90798369 Msa0386960:intron 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG + chr3_1:90798792-90798811 None:intergenic 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG - chr3_1:90798360-90798379 Msa0386960:intron 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG + chr3_1:90798792-90798811 None:intergenic 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG - chr3_1:90798360-90798379 Msa0386960:intron 45.0%
!! GGTTTTGGTCCCTGCAAAAT+AGG - chr3_1:90798441-90798460 Msa0386960:intron 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG + chr3_1:90798792-90798811 None:intergenic 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG - chr3_1:90798360-90798379 Msa0386960:intron 45.0%
! TTTTGTGCATATTGGGGCCA+GGG + chr3_1:90798605-90798624 None:intergenic 45.0%
GCAGGGACTAAAACCAAAAC+TGG - chr3_1:90798660-90798679 Msa0386960:intron 45.0%
ACAGGGACCAAAACCAAAAC+TGG - chr3_1:90798779-90798798 Msa0386960:intron 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG + chr3_1:90798360-90798379 None:intergenic 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG - chr3_1:90798792-90798811 Msa0386960:intron 45.0%
!! GGTATTGGTCCCTGCAAAAT+AGG + chr3_1:90798350-90798369 None:intergenic 45.0%
TGTTGGTATCCACGGTTTAG+AGG + chr3_1:90799178-90799197 None:intergenic 45.0%
ACCGTGGATACCAACATATG+TGG - chr3_1:90799182-90799201 Msa0386960:intron 45.0%
GCCACATATGTTGGTATCCA+CGG + chr3_1:90799186-90799205 None:intergenic 45.0%
GAAAAAGCTCCTTTGAGCCA+TGG + chr3_1:90799299-90799318 None:intergenic 45.0%
GAAGTAATGAGACACCAGAC+GGG + chr3_1:90800162-90800181 None:intergenic 45.0%
!! TTCCTTAGCTCTAAGGTCCT+GGG - chr3_1:90800268-90800287 Msa0386960:intron 45.0%
TACACAGAAATTCTCCTCCC+AGG + chr3_1:90800288-90800307 None:intergenic 45.0%
!! TAGGGGTGATGAGTTTTGGT+GGG + chr3_1:90800607-90800626 None:intergenic 45.0%
!! TTAGGGGTGATGAGTTTTGG+TGG + chr3_1:90800608-90800627 None:intergenic 45.0%
!!! GTGAAGGGGTCTGTTTTTAG+GGG + chr3_1:90800624-90800643 None:intergenic 45.0%
! GTAGTGACGATGAGTGGTTT+TGG + chr3_1:90800673-90800692 None:intergenic 45.0%
!!! GGACCGGGTGTTTTATTTTG+AGG + chr3_1:90800718-90800737 None:intergenic 45.0%
!!! TCAGGTTTGGTTTTAGGACC+GGG + chr3_1:90800733-90800752 None:intergenic 45.0%
!!! CTCAGGTTTGGTTTTAGGAC+CGG + chr3_1:90800734-90800753 None:intergenic 45.0%
!!! TGTGGCTCAGGTTTGGTTTT+AGG + chr3_1:90800739-90800758 None:intergenic 45.0%
!! TCCGAAGAGCACTTATCCTA+AGG - chr3_1:90800759-90800778 Msa0386960:intron 45.0%
ACCGTCATGTCTATACAAGC+AGG + chr3_1:90800969-90800988 None:intergenic 45.0%
TGCTTGTATAGACATGACGG+TGG - chr3_1:90800968-90800987 Msa0386960:intron 45.0%
AGGATGCAATGAAGACAACC+CGG + chr3_1:90801294-90801313 None:intergenic 45.0%
TCCAACACCTTCGTTGTGTT+GGG - chr3_1:90801313-90801332 Msa0386960:intron 45.0%
TGATTTAGTCCCACTTTGCC+TGG - chr3_1:90801347-90801366 Msa0386960:intron 45.0%
ACTGCATATGCCATATGTCC+AGG + chr3_1:90801368-90801387 None:intergenic 45.0%
TTGGGTAGCAGTTACCTTAC+TGG - chr3_1:90801399-90801418 Msa0386960:intron 45.0%
TTTCGCATCGTCTACACTTC+AGG - chr3_1:90801495-90801514 Msa0386960:CDS 45.0%
CGTCTACACTTCAGGCTTAT+TGG - chr3_1:90801503-90801522 Msa0386960:CDS 45.0%
TGCCTTAATTAGGCAGCTAG+GGG + chr3_1:90801592-90801611 None:intergenic 45.0%
CTTCTCTATAGGCATAGCCA+TGG - chr3_1:90801744-90801763 Msa0386960:CDS 45.0%
GCCGTCAAAGATGAAAGTGA+TGG - chr3_1:90801929-90801948 Msa0386960:CDS 45.0%
GTAACCATCACTGTTTCCCT+AGG - chr3_1:90802052-90802071 Msa0386960:five_prime_UTR 45.0%
ACTACCTAGGGAAACAGTGA+TGG + chr3_1:90802059-90802078 None:intergenic 45.0%
ATCACTGTTTCCCTAGGTAG+TGG - chr3_1:90802058-90802077 Msa0386960:five_prime_UTR 45.0%
AACACATCCTCCACTACCTA+GGG + chr3_1:90802071-90802090 None:intergenic 45.0%
AAACACATCCTCCACTACCT+AGG + chr3_1:90802072-90802091 None:intergenic 45.0%
AAGGACCCGATGAGGATATA+TGG + chr3_1:90802132-90802151 None:intergenic 45.0%
!!! TATAAATTTTTCATTAAAAA+AGG + chr3_1:90793014-90793033 None:intergenic 5.0%
!!! TTTTAATGAAAAATTTATAT+TGG - chr3_1:90793015-90793034 Msa0386960:intron 5.0%
!! TTTAATGAAAAATTTATATT+GGG - chr3_1:90793016-90793035 Msa0386960:intron 5.0%
!!! TTATTGATTTTTTTTATAAT+TGG - chr3_1:90798263-90798282 Msa0386960:intron 5.0%
!!! TATTGATTTTTTTTATAATT+GGG - chr3_1:90798264-90798283 Msa0386960:intron 5.0%
!!! TAGTTTATTTTATTTATAAT+TGG - chr3_1:90798294-90798313 Msa0386960:intron 5.0%
!!! AGTTTATTTTATTTATAATT+GGG - chr3_1:90798295-90798314 Msa0386960:intron 5.0%
!!! AAAAAAAAAATTATAGTTTT+TGG - chr3_1:90798547-90798566 Msa0386960:intron 5.0%
!!! TAAAAAAAAATTATAGTTTT+TGG + chr3_1:90798760-90798779 None:intergenic 5.0%
!! TATAAATTGTAAAAAATAAA+AGG - chr3_1:90800031-90800050 Msa0386960:intron 5.0%
!!! TGGGGCTTTTGGTTTAGCCA+TGG + chr3_1:90792417-90792436 None:intergenic 50.0%
!!! AGGTTTCGCTTTGGGGCTTT+TGG + chr3_1:90792428-90792447 None:intergenic 50.0%
GAGGGTTTGGATGGATCAGA+TGG + chr3_1:90792601-90792620 None:intergenic 50.0%
TCCATCCAAACCCTCTTACG+TGG - chr3_1:90792606-90792625 Msa0386960:intron 50.0%
CTTTGCCACGTAAGAGGGTT+TGG + chr3_1:90792614-90792633 None:intergenic 50.0%
GAATGAAACCTGTTCCTGCC+TGG - chr3_1:90793329-90793348 Msa0386960:CDS 50.0%
CCCCTTTGCATTGGAGAAGA+AGG + chr3_1:90793396-90793415 None:intergenic 50.0%
CTTCGATGTCAAAGTGAGGC+AGG - chr3_1:90793422-90793441 Msa0386960:intron 50.0%
AGTGAGGCAGGGTGAAGAAT+AGG - chr3_1:90793434-90793453 Msa0386960:intron 50.0%
GTGAGGCAGGGTGAAGAATA+GGG - chr3_1:90793435-90793454 Msa0386960:intron 50.0%
AGGGTGAAGAATAGGGCTTG+AGG - chr3_1:90793442-90793461 Msa0386960:intron 50.0%
GGGTGAAGAATAGGGCTTGA+GGG - chr3_1:90793443-90793462 Msa0386960:intron 50.0%
AGGGCTTGAGGGATTAAACC+TGG - chr3_1:90793454-90793473 Msa0386960:intron 50.0%
GGGCTTGAGGGATTAAACCT+GGG - chr3_1:90793455-90793474 Msa0386960:intron 50.0%
GGCTTGAGGGATTAAACCTG+GGG - chr3_1:90793456-90793475 Msa0386960:intron 50.0%
TAAACCTGGGGTTATCCCCT+TGG - chr3_1:90793468-90793487 Msa0386960:intron 50.0%
TAATCCAAGGGGATAACCCC+AGG + chr3_1:90793475-90793494 None:intergenic 50.0%
TTTACAGCGGAGCTGAACTG+AGG + chr3_1:90793543-90793562 None:intergenic 50.0%
GCTCCGCTGTAAACCTGATT+TGG - chr3_1:90793550-90793569 Msa0386960:intron 50.0%
!! AGAGTGCTGCGCTTCAACAA+TGG - chr3_1:90793582-90793601 Msa0386960:intron 50.0%
TTTACGGGACCTCGGAGTTA+AGG + chr3_1:90794637-90794656 None:intergenic 50.0%
GTTTCGGTACCTGTTCGATG+AGG - chr3_1:90795090-90795109 Msa0386960:CDS 50.0%
CTTCTCCTTAGGCATAGCCA+TGG - chr3_1:90795893-90795912 Msa0386960:intron 50.0%
AACATCGCTTCTACCTTCGG+CGG + chr3_1:90796067-90796086 None:intergenic 50.0%
! AGTTTGTTCAGCTCCTACCC+AGG + chr3_1:90796146-90796165 None:intergenic 50.0%
ATCCCTGTTTCCCTTGGAAG+TGG - chr3_1:90796261-90796280 Msa0386960:intron 50.0%
CTCCACTTCCAAGGGAAACA+GGG + chr3_1:90796266-90796285 None:intergenic 50.0%
GTATGAACAAGGACCCGATG+GGG + chr3_1:90796343-90796362 None:intergenic 50.0%
GAGTATGAACAAGGACCCGA+TGG + chr3_1:90796345-90796364 None:intergenic 50.0%
TTCGAGGGTCACTAGAACTG+GGG + chr3_1:90796732-90796751 None:intergenic 50.0%
!!! GTCGGGATATTTTGGCCAAC+GGG + chr3_1:90796767-90796786 None:intergenic 50.0%
! CTCCATAGTTGAGTTGCAGG+AGG - chr3_1:90797056-90797075 Msa0386960:intron 50.0%
GCAGGGACCAAAACCAAAAC+TGG + chr3_1:90798376-90798395 None:intergenic 50.0%
GCAGGGACCAAAACCAAAAC+TGG + chr3_1:90798376-90798395 None:intergenic 50.0%
CCAGGGACGAAAACCAAAAC+TGG + chr3_1:90798467-90798486 None:intergenic 50.0%
!!! CCAGTTTTGGTTTTCGTCCC+TGG - chr3_1:90798464-90798483 Msa0386960:intron 50.0%
! CTTTTGTGCATATTGGGGCC+AGG + chr3_1:90798606-90798625 None:intergenic 50.0%
TTCGTGTCCGTTGGTACTAC+TGG - chr3_1:90799241-90799260 Msa0386960:intron 50.0%
GCGTCATTTCCATGGCTCAA+AGG - chr3_1:90799287-90799306 Msa0386960:intron 50.0%
AATCAGTGCAGCGATCACAC+TGG + chr3_1:90799692-90799711 None:intergenic 50.0%
! AGTGTGATCGCTGCACTGAT+TGG - chr3_1:90799691-90799710 Msa0386960:intron 50.0%
CGGGTGCGAAAGACATATCA+TGG + chr3_1:90800143-90800162 None:intergenic 50.0%
ATATGTCTTTCGCACCCGTC+TGG - chr3_1:90800145-90800164 Msa0386960:intron 50.0%
!! CTTCCTTAGCTCTAAGGTCC+TGG - chr3_1:90800267-90800286 Msa0386960:intron 50.0%
GGATAAGTGCTCTTCGGATG+TGG + chr3_1:90800757-90800776 None:intergenic 50.0%
TGGGCAGCTGTTTGATCCTT+AGG + chr3_1:90800778-90800797 None:intergenic 50.0%
TATCAAAGATCTCGGAGGCC+AGG + chr3_1:90801174-90801193 None:intergenic 50.0%
!! CAACACAACGAAGGTGTTGG+AGG + chr3_1:90801314-90801333 None:intergenic 50.0%
CTCCAACACCTTCGTTGTGT+TGG - chr3_1:90801312-90801331 Msa0386960:intron 50.0%
! ACCCAACACAACGAAGGTGT+TGG + chr3_1:90801317-90801336 None:intergenic 50.0%
CTTCACACCCAACACAACGA+AGG + chr3_1:90801323-90801342 None:intergenic 50.0%
TCGTTGTGTTGGGTGTGAAG+AGG - chr3_1:90801323-90801342 Msa0386960:intron 50.0%
TCCCACTTTGCCTGGACATA+TGG - chr3_1:90801355-90801374 Msa0386960:intron 50.0%
GCCATATGTCCAGGCAAAGT+GGG + chr3_1:90801359-90801378 None:intergenic 50.0%
TGCCATATGTCCAGGCAAAG+TGG + chr3_1:90801360-90801379 None:intergenic 50.0%
CTTAATTAGGCAGCTAGGGG+AGG + chr3_1:90801589-90801608 None:intergenic 50.0%
CTCCCCTAGCTGCCTAATTA+AGG - chr3_1:90801587-90801606 Msa0386960:intron 50.0%
GGGATGCATAGCTGCAATGA+AGG + chr3_1:90801624-90801643 None:intergenic 50.0%
! ACTGTTTCCCTAGGTAGTGG+AGG - chr3_1:90802061-90802080 Msa0386960:five_prime_UTR 50.0%
GTATGAACAAGGACCCGATG+AGG + chr3_1:90796343-90796362 None:intergenic 50.0%
CAACTGCCAACACGATTCAC+TGG + chr3_1:90802233-90802252 None:intergenic 50.0%
! CAGTGAATCGTGTTGGCAGT+TGG - chr3_1:90802231-90802250 Msa0386960:five_prime_UTR 50.0%
GCCACGTAAGAGGGTTTGGA+TGG + chr3_1:90792610-90792629 None:intergenic 55.0%
! GGGATCGAAGCTGATTCACG+AGG - chr3_1:90792640-90792659 Msa0386960:intron 55.0%
GCGGAGCTGAACTGAGGATA+AGG + chr3_1:90793537-90793556 None:intergenic 55.0%
GGCTGCAGTGACTGGTAAGT+TGG - chr3_1:90793716-90793735 Msa0386960:intron 55.0%
AGAGTAGGTTTGGGGAGCAG+GGG + chr3_1:90794106-90794125 None:intergenic 55.0%
GAGAGTAGGTTTGGGGAGCA+GGG + chr3_1:90794107-90794126 None:intergenic 55.0%
! GTGCTACTAGAGTTGCCACC+AGG + chr3_1:90794850-90794869 None:intergenic 55.0%
TGGATACTAAACGCCGCCGA+AGG - chr3_1:90796051-90796070 Msa0386960:intron 55.0%
CCTCCACTTCCAAGGGAAAC+AGG + chr3_1:90796267-90796286 None:intergenic 55.0%
CCTGTTTCCCTTGGAAGTGG+AGG - chr3_1:90796264-90796283 Msa0386960:intron 55.0%
GGGTCACTAGAACTGGGGAT+GGG + chr3_1:90796727-90796746 None:intergenic 55.0%
AGGGTCACTAGAACTGGGGA+TGG + chr3_1:90796728-90796747 None:intergenic 55.0%
GCATGCGTTCCTCTAAACCG+TGG - chr3_1:90799166-90799185 Msa0386960:intron 55.0%
CAAGAGACGTTCGTGTCCGT+TGG - chr3_1:90799232-90799251 Msa0386960:intron 55.0%
TGTCCGTTGGTACTACTGGC+CGG - chr3_1:90799245-90799264 Msa0386960:intron 55.0%
TGGCCGGAGGAGACAAAGAA+GGG - chr3_1:90799261-90799280 Msa0386960:intron 55.0%
CGACCCTTCTTTGTCTCCTC+CGG + chr3_1:90799267-90799286 None:intergenic 55.0%
CGGAGGAGACAAAGAAGGGT+CGG - chr3_1:90799265-90799284 Msa0386960:intron 55.0%
AAGGGTCGGCGTCATTTCCA+TGG - chr3_1:90799279-90799298 Msa0386960:intron 55.0%
!! AGGAGTGAGAGCACCAGTAG+CGG + chr3_1:90799451-90799470 None:intergenic 55.0%
CTCCCAGGACCTTAGAGCTA+AGG + chr3_1:90800273-90800292 None:intergenic 55.0%
!! CTTAGCTCTAAGGTCCTGGG+AGG - chr3_1:90800271-90800290 Msa0386960:intron 55.0%
GGGTGAGTAGTGACGATGAG+TGG + chr3_1:90800679-90800698 None:intergenic 55.0%
CTTCGGATGTGGCTCAGGTT+TGG + chr3_1:90800746-90800765 None:intergenic 55.0%
ATGCTGCAGTTAGGCGGCTA+GGG + chr3_1:90801271-90801290 None:intergenic 55.0%
ACAACCCGGATGCTGCAGTT+AGG + chr3_1:90801280-90801299 None:intergenic 55.0%
TACCGGCCGGAGGAGTCAAT+TGG - chr3_1:90792694-90792713 Msa0386960:intron 60.0%
! CACCAATTGACTCCTCCGGC+CGG + chr3_1:90792699-90792718 None:intergenic 60.0%
! CGGCCACCAATTGACTCCTC+CGG + chr3_1:90792703-90792722 None:intergenic 60.0%
! CGGAGGAGTCAATTGGTGGC+CGG - chr3_1:90792701-90792720 Msa0386960:intron 60.0%
GGTGGCCGGAGACAGTTTCA+CGG - chr3_1:90792715-90792734 Msa0386960:intron 60.0%
CTCTGTATTCCGAGGCAGCC+AGG + chr3_1:90793350-90793369 None:intergenic 60.0%
AGTGTGAGGGCTGCAGTGAC+TGG - chr3_1:90793708-90793727 Msa0386960:intron 60.0%
GACAGAAGCAGCGAGCCAGA+AGG + chr3_1:90794054-90794073 None:intergenic 60.0%
GGAGAGTAGGTTTGGGGAGC+AGG + chr3_1:90794108-90794127 None:intergenic 60.0%
CCTCCGGCCAGTAGTACCAA+CGG + chr3_1:90799251-90799270 None:intergenic 60.0%
CTGGCCGGAGGAGACAAAGA+AGG - chr3_1:90799260-90799279 Msa0386960:intron 60.0%
GTGCTCTTCGGATGTGGCTC+AGG + chr3_1:90800751-90800770 None:intergenic 60.0%
TGCTGCAGTTAGGCGGCTAG+GGG + chr3_1:90801270-90801289 None:intergenic 60.0%
GATGCTGCAGTTAGGCGGCT+AGG + chr3_1:90801272-90801291 None:intergenic 60.0%
AGCCGCCTAACTGCAGCATC+CGG - chr3_1:90801272-90801291 Msa0386960:intron 60.0%
ACCCGGATGCTGCAGTTAGG+CGG + chr3_1:90801277-90801296 None:intergenic 60.0%
CGTCCGGTGGTATTACCGGC+CGG - chr3_1:90792681-90792700 Msa0386960:intron 65.0%
CCTCCGGCCGGTAATACCAC+CGG + chr3_1:90792687-90792706 None:intergenic 65.0%
CGGCCGGAGGAGTCAATTGG+TGG - chr3_1:90792697-90792716 Msa0386960:intron 65.0%
CTGTTCCTGCCTGGCTGCCT+CGG - chr3_1:90793338-90793357 Msa0386960:CDS 65.0%
GTATTCCGAGGCAGCCAGGC+AGG + chr3_1:90793346-90793365 None:intergenic 65.0%
CCGTTGGTACTACTGGCCGG+AGG - chr3_1:90799248-90799267 Msa0386960:intron 65.0%
GCCGCCTAACTGCAGCATCC+GGG - chr3_1:90801273-90801292 Msa0386960:intron 65.0%
GCTAGGGGAGGTCGCAAGGA+TGG + chr3_1:90801577-90801596 None:intergenic 65.0%
CCGGTGGTATTACCGGCCGG+AGG - chr3_1:90792684-90792703 Msa0386960:intron 70.0%
CGAGGCAGCCAGGCAGGAAC+AGG + chr3_1:90793340-90793359 None:intergenic 70.0%
GGCAGCTAGGGGAGGTCGCA+AGG + chr3_1:90801581-90801600 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 90792125 90802254 90792125 ID=Msa0386960;Name=Msa0386960
chr3_1 mRNA 90792125 90802254 90792125 ID=Msa0386960-mRNA-1;Parent=Msa0386960;Name=Msa0386960-mRNA-1;_AED=0.19;_eAED=0.20;_QI=291|0.44|0.4|1|0.44|0.5|10|312|378
chr3_1 exon 90792125 90792463 90792125 ID=Msa0386960-mRNA-1:exon:25215;Parent=Msa0386960-mRNA-1
chr3_1 exon 90793285 90793420 90793285 ID=Msa0386960-mRNA-1:exon:25214;Parent=Msa0386960-mRNA-1
chr3_1 exon 90794895 90795037 90794895 ID=Msa0386960-mRNA-1:exon:25213;Parent=Msa0386960-mRNA-1
chr3_1 exon 90795044 90795228 90795044 ID=Msa0386960-mRNA-1:exon:25212;Parent=Msa0386960-mRNA-1
chr3_1 exon 90798031 90798052 90798031 ID=Msa0386960-mRNA-1:exon:25211;Parent=Msa0386960-mRNA-1
chr3_1 exon 90799033 90799168 90799033 ID=Msa0386960-mRNA-1:exon:25210;Parent=Msa0386960-mRNA-1
chr3_1 exon 90800650 90800718 90800650 ID=Msa0386960-mRNA-1:exon:25209;Parent=Msa0386960-mRNA-1
chr3_1 exon 90801459 90801601 90801459 ID=Msa0386960-mRNA-1:exon:25208;Parent=Msa0386960-mRNA-1
chr3_1 exon 90801608 90801804 90801608 ID=Msa0386960-mRNA-1:exon:25207;Parent=Msa0386960-mRNA-1
chr3_1 exon 90801885 90802254 90801885 ID=Msa0386960-mRNA-1:exon:25206;Parent=Msa0386960-mRNA-1
chr3_1 five_prime_UTR 90801964 90802254 90801964 ID=Msa0386960-mRNA-1:five_prime_utr;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90801885 90801963 90801885 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90801608 90801804 90801608 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90801459 90801601 90801459 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90800650 90800718 90800650 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90799033 90799168 90799033 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90798031 90798052 90798031 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90795044 90795228 90795044 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90794895 90795037 90794895 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90793285 90793420 90793285 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 CDS 90792437 90792463 90792437 ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1
chr3_1 three_prime_UTR 90792125 90792436 90792125 ID=Msa0386960-mRNA-1:three_prime_utr;Parent=Msa0386960-mRNA-1
Gene Sequence

>Msa0386960

ATGGCTAAACCAAAAGCCCCAAAGCGAAACCTAGAGTCATACTCAGTCAAACATATGAACAAATCTGTCACAATCAAAGCTGGGGATTGTGTGCTTATGCGTCCATCTGATCCATCCAAACCCTCTTACGTGGCAAAGATCGAAGGGATCGAAGCTGATTCACGAGGTGCTAACGTTAAAGTTAACGTCCGGTGGTATTACCGGCCGGAGGAGTCAATTGGTGGCCGGAGACAGTTTCACGGTTCAAAGGAGCTTTTTCTGTCAGATCATTTTGATAGTGCTGATACAATTGAAGGAAAGTGTATTGTTCATGGTTTCAAGAGCTACACTAAGCTTGATGCTGTTGGTAATGATGATTTCTTCTGTCGATTTGAGTACAATTCTGCTACTGGTGCTTTCAATCCTGATAGAGTTGCAGTGTATTGTAAATGTGAGATGCCCTACAACCCTGATGATCTGATGGTTCAGTGTGAGGGCTGCAGTGACTGGTTTCATCCTGCTTGTATAGACATGACTGTGGAGGAAGCCGAAAGACTTGACCACTTCTTTTGTGAAAGTTGTTCCGTTGAAGGTCAAAAACAGCTGCAAAATTCTCATTCTGCTACAAGACTCGCAGATACAAAGATTCTCTATCTATCCCCATCGGAGGGTGATTGTGTACGCATGCGTTCCTCTAAACCGTGGATACCAACATATGTGGCTATGATCGAAGAGATGAAAGCTGATTCAAGAGACGTTCGTGTCCGTTGGTACTACTGGCCGGAGGAGACAAAGAAGGGTCGGCGTCATTTCCATGGCTCAAAGGAGCTTTTTCTATCTGATCATTTAGATAGTGTTGATACAATCGAAGGAAAATGCACTGTTCACAGTTTGGAGAACTACATGAAGCTTGATGTTGTTGGTGATGATGATTTCTTCTGTCGATTGAACTACAATTCCGCTACTGGTGCTCTCACTCCTGATATAGTTCAAGTGTTTCATCCTGCTTGTATAGACATGACGGTGGAAGAAGCCGAAAGAATTGACAACTTCATTTGTGAAAGTTGTTCTGCCGAAGTTCAAAAAAAGTTGCAAGATTCTCATTCTGCTGCAAGACTCCCAAATACAAAGGTGGATACTAAACGCCGTCAAAGATGA

Protein sequence

>Msa0386960

MAKPKAPKRNLESYSVKHMNKSVTIKAGDCVLMRPSDPSKPSYVAKIEGIEADSRGANVKVNVRWYYRPEESIGGRRQFHGSKELFLSDHFDSADTIEGKCIVHGFKSYTKLDAVGNDDFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAERLDHFFCESCSVEGQKQLQNSHSATRLADTKILYLSPSEGDCVRMRSSKPWIPTYVAMIEEMKADSRDVRVRWYYWPEETKKGRRHFHGSKELFLSDHLDSVDTIEGKCTVHSLENYMKLDVVGDDDFFCRLNYNSATGALTPDIVQVFHPACIDMTVEEAERIDNFICESCSAEVQKKLQDSHSAARLPNTKVDTKRRQR*