Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0386960 | XP_003603985.1 | 61.780 | 191 | 44 | 3 | 217 | 378 | 28 | 218 | 1.56e-68 | 225 |
Msa0386960 | XP_003603985.1 | 98.104 | 211 | 2 | 1 | 1 | 209 | 1 | 211 | 7.78e-152 | 437 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0386960 | sp|Q9FEN9|SHL_ARATH | 69.668 | 211 | 59 | 3 | 1 | 209 | 1 | 208 | 1.58e-107 | 318 |
Msa0386960 | sp|Q9FEN9|SHL_ARATH | 49.020 | 204 | 72 | 5 | 203 | 375 | 10 | 212 | 2.95e-55 | 184 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0386960 | G7J7R0 | 61.780 | 191 | 44 | 3 | 217 | 378 | 28 | 218 | 7.46e-69 | 225 |
Msa0386960 | G7J7R0 | 98.104 | 211 | 2 | 1 | 1 | 209 | 1 | 211 | 3.71e-152 | 437 |
Gene ID | Type | Classification |
---|---|---|
Msa0386960 | TR | PHD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0386960 | Msa1412220 | 0.870587 | 1.303777e-66 | -8.615850e-47 |
Msa0386960 | Msa1460200 | 0.848699 | 5.189565e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0386960 | MtrunA17_Chr3g0145031 | 98.104 | 211 | 2 | 1 | 1 | 209 | 1 | 211 | 7.15e-156 | 437 |
Msa0386960 | MtrunA17_Chr3g0145031 | 61.780 | 191 | 44 | 3 | 217 | 378 | 28 | 218 | 1.44e-72 | 225 |
Msa0386960 | MtrunA17_Chr3g0145041 | 78.125 | 192 | 17 | 2 | 212 | 378 | 5 | 196 | 3.66e-100 | 295 |
Msa0386960 | MtrunA17_Chr3g0145041 | 68.912 | 193 | 54 | 2 | 19 | 209 | 1 | 189 | 6.28e-94 | 279 |
Msa0386960 | MtrunA17_Chr2g0316511 | 66.509 | 212 | 65 | 4 | 1 | 209 | 1 | 209 | 1.81e-95 | 284 |
Msa0386960 | MtrunA17_Chr2g0316511 | 45.550 | 191 | 75 | 4 | 217 | 378 | 26 | 216 | 9.96e-47 | 159 |
Msa0386960 | MtrunA17_Chr2g0324381 | 50.000 | 192 | 86 | 6 | 1 | 188 | 10 | 195 | 1.05e-57 | 186 |
Msa0386960 | MtrunA17_Chr2g0324381 | 42.515 | 167 | 65 | 5 | 218 | 354 | 34 | 199 | 1.69e-33 | 123 |
Msa0386960 | MtrunA17_Chr5g0447451 | 44.961 | 129 | 59 | 6 | 74 | 190 | 15 | 143 | 4.48e-27 | 104 |
Msa0386960 | MtrunA17_Chr2g0324361 | 51.000 | 100 | 43 | 4 | 27 | 124 | 12 | 107 | 4.54e-25 | 98.2 |
Msa0386960 | MtrunA17_Chr2g0324361 | 47.959 | 98 | 43 | 4 | 217 | 309 | 13 | 107 | 5.47e-18 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0386960 | AT4G39100.1 | 69.668 | 211 | 59 | 3 | 1 | 209 | 1 | 208 | 1.61e-108 | 318 |
Msa0386960 | AT4G39100.1 | 49.020 | 204 | 72 | 5 | 203 | 375 | 10 | 212 | 3.00e-56 | 184 |
Msa0386960 | AT4G22140.2 | 65.877 | 211 | 66 | 4 | 2 | 209 | 10 | 217 | 1.18e-100 | 297 |
Msa0386960 | AT4G22140.2 | 46.597 | 191 | 73 | 4 | 217 | 378 | 34 | 224 | 8.94e-52 | 172 |
Msa0386960 | AT4G22140.1 | 65.877 | 211 | 66 | 4 | 2 | 209 | 10 | 217 | 2.04e-100 | 297 |
Msa0386960 | AT4G22140.1 | 45.652 | 184 | 71 | 4 | 217 | 371 | 34 | 217 | 1.66e-47 | 161 |
Msa0386960 | AT4G22140.3 | 65.877 | 211 | 66 | 4 | 2 | 209 | 10 | 217 | 2.04e-100 | 297 |
Msa0386960 | AT4G22140.3 | 45.652 | 184 | 71 | 4 | 217 | 371 | 34 | 217 | 1.66e-47 | 161 |
Msa0386960 | AT4G39100.2 | 75.758 | 165 | 36 | 2 | 1 | 163 | 1 | 163 | 8.10e-91 | 270 |
Msa0386960 | AT4G39100.2 | 58.333 | 132 | 47 | 3 | 203 | 326 | 10 | 141 | 1.87e-44 | 151 |
Msa0386960 | AT4G04260.2 | 57.921 | 202 | 74 | 5 | 28 | 225 | 9 | 203 | 3.86e-73 | 227 |
Msa0386960 | AT4G04260.2 | 41.530 | 183 | 78 | 4 | 217 | 370 | 9 | 191 | 8.44e-42 | 145 |
Msa0386960 | AT4G04260.1 | 56.853 | 197 | 74 | 5 | 33 | 225 | 1 | 190 | 6.19e-69 | 215 |
Msa0386960 | AT4G04260.1 | 40.449 | 178 | 77 | 4 | 222 | 370 | 1 | 178 | 1.38e-38 | 137 |
Msa0386960 | AT4G04260.3 | 69.492 | 118 | 33 | 2 | 25 | 140 | 24 | 140 | 4.96e-52 | 170 |
Msa0386960 | AT4G04260.3 | 52.800 | 125 | 50 | 3 | 206 | 325 | 20 | 140 | 6.20e-36 | 128 |
Find 121 sgRNAs with CRISPR-Local
Find 687 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTAGGAATACCTTTGTATT+TGG | 0.149988 | 3_1:+90793274 | None:intergenic |
ATGACTCTAGGTTTCGCTTT+GGG | 0.256713 | 3_1:+90801924 | None:intergenic |
AGAGAAGTAGAGGGGTTTGT+TGG | 0.281029 | 3_1:+90802094 | None:intergenic |
AAAAGAAGGTTATGGCAATT+TGG | 0.283943 | 3_1:+90802064 | None:intergenic |
AGGTTTCGCTTTGGGGCTTT+TGG | 0.301619 | 3_1:+90801932 | None:intergenic |
AATGAAGTTGTCAATTCTTT+CGG | 0.316759 | 3_1:+90793360 | None:intergenic |
CTTTGCCACGTAAGAGGGTT+TGG | 0.340256 | 3_1:+90801746 | None:intergenic |
GAAGGAAAGTGTATTGTTCA+TGG | 0.347757 | 3_1:-90801564 | Msa0386960:CDS |
TTAGGAATACCTTTGTATTT+GGG | 0.355673 | 3_1:+90793275 | None:intergenic |
AAAGAAGTGGTCAAGTCTTT+CGG | 0.363321 | 3_1:+90799108 | None:intergenic |
ACTCACACTGCAACTCTATC+AGG | 0.365443 | 3_1:+90801453 | None:intergenic |
GAAAAGAAAGATTGAATTGA+AGG | 0.367791 | 3_1:+90802028 | None:intergenic |
AAGGACCCGATGAGGATATA+TGG | 0.371664 | 3_1:+90792228 | None:intergenic |
ACCATCACTTTCATCTTTGA+CGG | 0.371838 | 3_1:+90792427 | None:intergenic |
TTAACGTCCGGTGGTATTAC+CGG | 0.372519 | 3_1:-90801680 | Msa0386960:CDS |
AAAATGCACTGTTCACAGTT+TGG | 0.374580 | 3_1:-90794995 | Msa0386960:CDS |
CACTGAACCATCAGATCATC+AGG | 0.376018 | 3_1:+90800668 | None:intergenic |
TGTGAAAGTTGTTCCGTTGA+AGG | 0.381340 | 3_1:-90799085 | Msa0386960:CDS |
GAAAGTCTTAATGTGTATAC+TGG | 0.395769 | 3_1:+90792156 | None:intergenic |
ACTCACACTTGAACTATATC+AGG | 0.399463 | 3_1:+90794889 | None:intergenic |
TGTTGGTATCCACGGTTTAG+AGG | 0.405406 | 3_1:+90795182 | None:intergenic |
TTCGTGTCCGTTGGTACTAC+TGG | 0.414838 | 3_1:-90795116 | Msa0386960:CDS |
CATCAGATCATCAGGGTTGT+AGG | 0.418034 | 3_1:+90800676 | None:intergenic |
ATCAAAGAGTTTGACTTTCG+AGG | 0.418489 | 3_1:+90802200 | None:intergenic |
GGTGTACATTAGATATATAA+TGG | 0.440667 | 3_1:-90792407 | Msa0386960:three_prime_UTR |
TTCGATCTTTGCCACGTAAG+AGG | 0.444854 | 3_1:+90801740 | None:intergenic |
TATGACTCTAGGTTTCGCTT+TGG | 0.453882 | 3_1:+90801923 | None:intergenic |
TTGAACTACAATTCCGCTAC+TGG | 0.456893 | 3_1:-90794922 | Msa0386960:CDS |
ATAGAAATAAAAGAAGGTTA+TGG | 0.462193 | 3_1:+90802056 | None:intergenic |
CAAACTCTTTGATAGTAAGT+TGG | 0.472062 | 3_1:-90802190 | Msa0386960:five_prime_UTR |
TTTGAGTACAATTCTGCTAC+TGG | 0.478917 | 3_1:-90801486 | Msa0386960:CDS |
TGGTAGTTAAAGAGAAGTAG+AGG | 0.479471 | 3_1:+90802084 | None:intergenic |
GTTTCTCCATATATCCTCAT+CGG | 0.495271 | 3_1:-90792234 | Msa0386960:three_prime_UTR |
CAGAGTGCTGATACAATTGA+AGG | 0.496733 | 3_1:-90801582 | Msa0386960:CDS |
AGTGTGAGGGCTGCAGTGAC+TGG | 0.500549 | 3_1:-90800649 | Msa0386960:intron |
TCGATCTTTGCCACGTAAGA+GGG | 0.507398 | 3_1:+90801741 | None:intergenic |
TGACTCTAGGTTTCGCTTTG+GGG | 0.508250 | 3_1:+90801925 | None:intergenic |
GCCACGTAAGAGGGTTTGGA+TGG | 0.509773 | 3_1:+90801750 | None:intergenic |
GAGACAGTTTCACGGTTCAA+AGG | 0.514600 | 3_1:-90801634 | Msa0386960:CDS |
GATTCTCTATCTATCCCCAT+CGG | 0.517084 | 3_1:-90798031 | Msa0386960:CDS |
GGTAGTTAAAGAGAAGTAGA+GGG | 0.520077 | 3_1:+90802085 | None:intergenic |
TACCGGCCGGAGGAGTCAAT+TGG | 0.521187 | 3_1:-90801663 | Msa0386960:CDS |
CAAGAGACGTTCGTGTCCGT+TGG | 0.522823 | 3_1:-90795125 | Msa0386960:CDS |
TTTCTCCATATATCCTCATC+GGG | 0.523027 | 3_1:-90792233 | Msa0386960:three_prime_UTR |
AACAAATCTGTCACAATCAA+AGG | 0.523901 | 3_1:-90801884 | Msa0386960:intron |
ATCAGATCATCAGGGTTGTA+GGG | 0.525800 | 3_1:+90800677 | None:intergenic |
ATCACTGTTTCCCTAGGTAG+TGG | 0.526395 | 3_1:-90792299 | Msa0386960:three_prime_UTR |
CGACCCTTCTTTGTCTCCTC+CGG | 0.527955 | 3_1:+90795093 | None:intergenic |
TACATGAAGCTTGATGTTGT+TGG | 0.528797 | 3_1:-90794967 | Msa0386960:CDS |
GCCACATATGTTGGTATCCA+CGG | 0.537762 | 3_1:+90795174 | None:intergenic |
TGCTTTGTCTTTGAGTGGCA+TGG | 0.540617 | 3_1:+90802161 | None:intergenic |
CGGCCACCAATTGACTCCTC+CGG | 0.542045 | 3_1:+90801657 | None:intergenic |
AAACACATCCTCCACTACCT+AGG | 0.542451 | 3_1:+90792288 | None:intergenic |
GAGAAAATAGAAATAAAAGA+AGG | 0.542861 | 3_1:+90802050 | None:intergenic |
CTACAACCCTGATGATCTGA+TGG | 0.544719 | 3_1:-90800675 | Msa0386960:CDS |
TGATCTGATGGTTCAGTGTG+AGG | 0.546259 | 3_1:-90800663 | Msa0386960:CDS |
ATTCTCTATCTATCCCCATC+GGG | 0.547443 | 3_1:-90798030 | Msa0386960:intron |
CAACTGCCAACACGATTCAC+TGG | 0.547820 | 3_1:+90792127 | None:intergenic |
TACATTAGATATATAATGGA+CGG | 0.550351 | 3_1:-90792403 | Msa0386960:three_prime_UTR |
ACCAAGGATTTGAAAAGCTA+GGG | 0.551461 | 3_1:+90792378 | None:intergenic |
TACCAAGGATTTGAAAAGCT+AGG | 0.554541 | 3_1:+90792377 | None:intergenic |
CGGCCGGAGGAGTCAATTGG+TGG | 0.557866 | 3_1:-90801660 | Msa0386960:CDS |
GAGGGTTTGGATGGATCAGA+TGG | 0.563022 | 3_1:+90801759 | None:intergenic |
TACACTAAGCTTGATGCTGT+TGG | 0.564424 | 3_1:-90801531 | Msa0386960:CDS |
AGTTTATTCAGCTCCTACCA+AGG | 0.567083 | 3_1:+90792362 | None:intergenic |
CGGAGGAGTCAATTGGTGGC+CGG | 0.567621 | 3_1:-90801656 | Msa0386960:CDS |
GTTTGACTGAGTATGACTCT+AGG | 0.568800 | 3_1:+90801912 | None:intergenic |
CAGTGAATCGTGTTGGCAGT+TGG | 0.569218 | 3_1:-90792126 | Msa0386960:three_prime_UTR |
AACACATCCTCCACTACCTA+GGG | 0.569275 | 3_1:+90792289 | None:intergenic |
GTAGTTAAAGAGAAGTAGAG+GGG | 0.569534 | 3_1:+90802086 | None:intergenic |
ACCGTCATGTCTATACAAGC+AGG | 0.569799 | 3_1:+90793391 | None:intergenic |
AAGGGTCGGCGTCATTTCCA+TGG | 0.570085 | 3_1:-90795078 | Msa0386960:CDS |
GGTGGCCGGAGACAGTTTCA+CGG | 0.570440 | 3_1:-90801642 | Msa0386960:CDS |
CTGGCCGGAGGAGACAAAGA+AGG | 0.572097 | 3_1:-90795097 | Msa0386960:CDS |
TAAAATGCTTTGTCTTTGAG+TGG | 0.576034 | 3_1:+90802156 | None:intergenic |
ACCGTGGATACCAACATATG+TGG | 0.579459 | 3_1:-90795175 | Msa0386960:CDS |
TGTCCGTTGGTACTACTGGC+CGG | 0.580901 | 3_1:-90795112 | Msa0386960:CDS |
AGCTGAATAAACTCTGACAA+TGG | 0.581923 | 3_1:-90792352 | Msa0386960:three_prime_UTR |
ACAGTCATGTCTATACAAGC+AGG | 0.584679 | 3_1:+90799139 | None:intergenic |
CACCAATTGACTCCTCCGGC+CGG | 0.585767 | 3_1:+90801661 | None:intergenic |
TCTTACGTGGCAAAGATCGA+AGG | 0.586509 | 3_1:-90801738 | Msa0386960:CDS |
TCGATCATAGCCACATATGT+TGG | 0.588140 | 3_1:+90795165 | None:intergenic |
ACATTAGATATATAATGGAC+GGG | 0.589985 | 3_1:-90792402 | Msa0386960:three_prime_UTR |
GTAACCATCACTGTTTCCCT+AGG | 0.592283 | 3_1:-90792305 | Msa0386960:three_prime_UTR |
AACAACTTTCACAAAAGAAG+TGG | 0.593717 | 3_1:+90799095 | None:intergenic |
GCGTCATTTCCATGGCTCAA+AGG | 0.593809 | 3_1:-90795070 | Msa0386960:CDS |
TTGAACCGTGAAACTGTCTC+CGG | 0.596615 | 3_1:+90801637 | None:intergenic |
GATCTGATGGTTCAGTGTGA+GGG | 0.605136 | 3_1:-90800662 | Msa0386960:CDS |
CGTGTGCTTTACACATCACA+CGG | 0.608973 | 3_1:+90802127 | None:intergenic |
CAAAAGTCTGAGTATGAACA+AGG | 0.609731 | 3_1:+90792209 | None:intergenic |
TATTCACCAGTGAATCGTGT+TGG | 0.610674 | 3_1:-90792133 | Msa0386960:three_prime_UTR |
CGGAGGAGACAAAGAAGGGT+CGG | 0.615656 | 3_1:-90795092 | Msa0386960:CDS |
CCTCCGGCCGGTAATACCAC+CGG | 0.617818 | 3_1:+90801673 | None:intergenic |
TCCTGCTTGTATAGACATGA+CGG | 0.620123 | 3_1:-90793392 | Msa0386960:CDS |
ACTACCTAGGGAAACAGTGA+TGG | 0.626362 | 3_1:+90792301 | None:intergenic |
CTAACGTTAAAGTTAACGTC+CGG | 0.628228 | 3_1:-90801692 | Msa0386960:CDS |
ACTGCGTAACTTACTTACTG+TGG | 0.632355 | 3_1:-90802241 | None:intergenic |
ACTGTTTCCCTAGGTAGTGG+AGG | 0.634735 | 3_1:-90792296 | Msa0386960:three_prime_UTR |
TACAAGACTCGCAGATACAA+AGG | 0.635448 | 3_1:-90799032 | Msa0386960:intron |
TGGCCGGAGGAGACAAAGAA+GGG | 0.641254 | 3_1:-90795096 | Msa0386960:CDS |
AGTATGAACAAGGACCCGAT+GGG | 0.641512 | 3_1:+90798016 | None:intergenic |
CAGAGTGTTGATACAATCGA+AGG | 0.642499 | 3_1:-90795018 | Msa0386960:CDS |
AGGAGTGAGAGCACCAGTAG+CGG | 0.642633 | 3_1:+90794909 | None:intergenic |
CGTCCGGTGGTATTACCGGC+CGG | 0.645283 | 3_1:-90801676 | Msa0386960:CDS |
CTTACGTGGCAAAGATCGAA+GGG | 0.647189 | 3_1:-90801737 | Msa0386960:CDS |
GCCGTCAAAGATGAAAGTGA+TGG | 0.650227 | 3_1:-90792428 | Msa0386960:exon |
CCTCCGGCCAGTAGTACCAA+CGG | 0.658998 | 3_1:+90795109 | None:intergenic |
TGCAAGACTCCCAAATACAA+AGG | 0.662219 | 3_1:-90793284 | Msa0386960:intron |
AACACAACACAACACAACCA+TGG | 0.662889 | 3_1:-90801960 | Msa0386960:exon |
TCCATCCAAACCCTCTTACG+TGG | 0.664323 | 3_1:-90801751 | Msa0386960:CDS |
CCGGTGGTATTACCGGCCGG+AGG | 0.671639 | 3_1:-90801673 | Msa0386960:CDS |
ACGTTAAAGTTAACGTCCGG+TGG | 0.681208 | 3_1:-90801689 | Msa0386960:CDS |
TTGTATAGACATGACTGTGG+AGG | 0.686994 | 3_1:-90799134 | Msa0386960:CDS |
GTATGAACAAGGACCCGATG+AGG | 0.693701 | 3_1:+90792220 | None:intergenic |
GGGATCGAAGCTGATTCACG+AGG | 0.707404 | 3_1:-90801717 | Msa0386960:CDS |
ACTGAACCATCAGATCATCA+GGG | 0.710984 | 3_1:+90800669 | None:intergenic |
GCATGCGTTCCTCTAAACCG+TGG | 0.713047 | 3_1:-90795191 | Msa0386960:CDS |
GTATGAACAAGGACCCGATG+GGG | 0.713752 | 3_1:+90798017 | None:intergenic |
CCGTTGGTACTACTGGCCGG+AGG | 0.722355 | 3_1:-90795109 | Msa0386960:CDS |
TGCTTGTATAGACATGACGG+TGG | 0.750089 | 3_1:-90793389 | Msa0386960:CDS |
TGCTTGTATAGACATGACTG+TGG | 0.776325 | 3_1:-90799137 | Msa0386960:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTAATTTAGATTATGTTT+TGG | - | chr3_1:90793067-90793086 | Msa0386960:intron | 10.0% |
!!! | ATTTTATTACTTACTTTTAT+TGG | - | chr3_1:90795010-90795029 | Msa0386960:CDS | 10.0% |
!! | TCTTTATAATAACATAATAA+AGG | + | chr3_1:90795829-90795848 | None:intergenic | 10.0% |
!! | AAAATTAATGTGAAATTAAA+AGG | - | chr3_1:90796489-90796508 | Msa0386960:intron | 10.0% |
!! | AAATTAATGTGAAATTAAAA+GGG | - | chr3_1:90796490-90796509 | Msa0386960:intron | 10.0% |
!! | TTAAGATATACTTATAATAA+AGG | - | chr3_1:90797095-90797114 | Msa0386960:intron | 10.0% |
!!! | ATTTTTGTTTATATTAATGA+CGG | + | chr3_1:90797893-90797912 | None:intergenic | 10.0% |
!!! | CAAAAAAAAATTATAGTTTT+TGG | - | chr3_1:90798395-90798414 | Msa0386960:intron | 10.0% |
!!! | GAAAAAAAAATTATAGTTTT+TGG | - | chr3_1:90798486-90798505 | Msa0386960:intron | 10.0% |
!!! | GTAAAAAAAATTATAGTTTT+TGG | + | chr3_1:90798701-90798720 | None:intergenic | 10.0% |
!!! | AAAACTATAATTTTTTTTAC+AGG | - | chr3_1:90798701-90798720 | Msa0386960:intron | 10.0% |
!!! | AAACTATAATTTTTTTTACA+GGG | - | chr3_1:90798702-90798721 | Msa0386960:intron | 10.0% |
!!! | AAACTATAATTTTTTTTTAC+AGG | - | chr3_1:90798761-90798780 | Msa0386960:intron | 10.0% |
!!! | AACTATAATTTTTTTTTACA+GGG | - | chr3_1:90798762-90798781 | Msa0386960:intron | 10.0% |
!! | TATGGTTATTATTTAATTAA+GGG | + | chr3_1:90800575-90800594 | None:intergenic | 10.0% |
!!! | AAATTTTTCTTCTAAATAAA+AGG | - | chr3_1:90801850-90801869 | Msa0386960:intron | 10.0% |
!!! | TTTTTTTAAAATGACAAAAG+TGG | + | chr3_1:90793234-90793253 | None:intergenic | 15.0% |
!!! | AAACAATAATAATTCTAGTT+AGG | - | chr3_1:90794356-90794375 | Msa0386960:intron | 15.0% |
!! | CCATTTATATTCATTTAAAT+AGG | + | chr3_1:90794407-90794426 | None:intergenic | 15.0% |
!! | CCTATTTAAATGAATATAAA+TGG | - | chr3_1:90794404-90794423 | Msa0386960:intron | 15.0% |
!! | TATTTATAAACCATGATAAA+TGG | - | chr3_1:90795055-90795074 | Msa0386960:CDS | 15.0% |
!!! | GTAATTTTACTAATCAAATT+TGG | + | chr3_1:90797286-90797305 | None:intergenic | 15.0% |
!!! | TTTTACACTATTTTTTGTTA+AGG | - | chr3_1:90797468-90797487 | Msa0386960:intron | 15.0% |
!!! | TTTTTGATTGATTCATTAAA+TGG | - | chr3_1:90797918-90797937 | Msa0386960:intron | 15.0% |
!!! | AACTATAATTTTTTTTTGCA+GGG | + | chr3_1:90798643-90798662 | None:intergenic | 15.0% |
!!! | AAACTATAATTTTTTTTTGC+AGG | + | chr3_1:90798642-90798661 | None:intergenic | 15.0% |
!!! | AACTATAATTTTTTTTTCCA+GGG | + | chr3_1:90798484-90798503 | None:intergenic | 15.0% |
!!! | AAACTATAATTTTTTTTTCC+AGG | + | chr3_1:90798485-90798504 | None:intergenic | 15.0% |
!!! | ACTATAATTTTTTTTTTGCA+GGG | + | chr3_1:90798544-90798563 | None:intergenic | 15.0% |
!!! | AACTATAATTTTTTTTTTGC+AGG | + | chr3_1:90798545-90798564 | None:intergenic | 15.0% |
!!! | CAAAAATAAAAAATTTTGCA+GGG | + | chr3_1:90798574-90798593 | None:intergenic | 15.0% |
!!! | AAACTATAATTTTTTTTTGC+AGG | - | chr3_1:90798642-90798661 | Msa0386960:intron | 15.0% |
!!! | AACTATAATTTTTTTTTGCA+GGG | - | chr3_1:90798643-90798662 | Msa0386960:intron | 15.0% |
!! | AATAATAGGAAAATATGTAA+AGG | + | chr3_1:90799502-90799521 | None:intergenic | 15.0% |
!! | ATTGTAAAAAATAAAAGGAA+AGG | - | chr3_1:90800036-90800055 | Msa0386960:intron | 15.0% |
!! | ATAATTGAAATTCATTTGAA+CGG | - | chr3_1:90800227-90800246 | Msa0386960:intron | 15.0% |
!!! | ATTTTTTTTGACAAAATACA+CGG | - | chr3_1:90800357-90800376 | Msa0386960:intron | 15.0% |
!! | CAAATATAGAAAAAACTTAT+TGG | - | chr3_1:90800432-90800451 | Msa0386960:intron | 15.0% |
!! | CTATGGTTATTATTTAATTA+AGG | + | chr3_1:90800576-90800595 | None:intergenic | 15.0% |
!!! | GCAAATAAACTAATTTTTTA+TGG | + | chr3_1:90800815-90800834 | None:intergenic | 15.0% |
!! | TATTCTTATTCAAAATACAA+AGG | + | chr3_1:90801679-90801698 | None:intergenic | 15.0% |
!! | TATTTAGAAGAAAAATTTAC+AGG | + | chr3_1:90801848-90801867 | None:intergenic | 15.0% |
!!! | ATTGATGTTTATATTTTGTT+TGG | - | chr3_1:90801885-90801904 | Msa0386960:CDS | 15.0% |
!! | ATAGAAATAAAAGAAGGTTA+TGG | + | chr3_1:90792304-90792323 | None:intergenic | 20.0% |
!! | GAGAAAATAGAAATAAAAGA+AGG | + | chr3_1:90792310-90792329 | None:intergenic | 20.0% |
!!! | TAAAGATATGATTTTTGTGT+TGG | - | chr3_1:90792972-90792991 | Msa0386960:intron | 20.0% |
!! | TGTTATTGCAAAATAGAATT+TGG | - | chr3_1:90793149-90793168 | Msa0386960:intron | 20.0% |
!! | GTTATTGCAAAATAGAATTT+GGG | - | chr3_1:90793150-90793169 | Msa0386960:intron | 20.0% |
!!! | AGAAAACAAGTATTTTAAGT+CGG | - | chr3_1:90793869-90793888 | Msa0386960:intron | 20.0% |
!! | ATCAAAAGAAACATAATTCT+CGG | + | chr3_1:90794226-90794245 | None:intergenic | 20.0% |
!! | ATTATACTTGTAATTGTTCA+TGG | - | chr3_1:90794244-90794263 | Msa0386960:intron | 20.0% |
!!! | AGACAATAATAATTCTAGTT+AGG | - | chr3_1:90794293-90794312 | Msa0386960:intron | 20.0% |
!! | AAATATGCTCAAACAAATTA+AGG | - | chr3_1:90794679-90794698 | Msa0386960:intron | 20.0% |
!! | AATATGCTCAAACAAATTAA+GGG | - | chr3_1:90794680-90794699 | Msa0386960:intron | 20.0% |
!! | AAAATCTATCTTTCTATCTA+AGG | + | chr3_1:90794905-90794924 | None:intergenic | 20.0% |
!! | AATAAACAGTTTAACAAGTT+GGG | + | chr3_1:90794955-90794974 | None:intergenic | 20.0% |
!! | TAATAAACAGTTTAACAAGT+TGG | + | chr3_1:90794956-90794975 | None:intergenic | 20.0% |
!! | AAGTAATAAAATGTCATACA+AGG | + | chr3_1:90795002-90795021 | None:intergenic | 20.0% |
!! | TTCTATATGAGAATATAACT+AGG | - | chr3_1:90795514-90795533 | Msa0386960:intron | 20.0% |
!! | AACATAAATTAACCCAAAAA+AGG | + | chr3_1:90795657-90795676 | None:intergenic | 20.0% |
!!! | TGTTTTCTTGTAAATTTTTC+TGG | - | chr3_1:90795974-90795993 | Msa0386960:intron | 20.0% |
!!! | ATTAGTGCTTATATTTTGTT+TGG | - | chr3_1:90796019-90796038 | Msa0386960:intron | 20.0% |
!!! | TATATTTTGTTTGGTATTGT+AGG | - | chr3_1:90796028-90796047 | Msa0386960:intron | 20.0% |
!!! | ATTTCACATTAATTTTAGTG+TGG | + | chr3_1:90796485-90796504 | None:intergenic | 20.0% |
!!! | TATAAATGGAGTATCAAATA+TGG | + | chr3_1:90796548-90796567 | None:intergenic | 20.0% |
!! | ATTGCAATTACTTGTATAAA+TGG | + | chr3_1:90796562-90796581 | None:intergenic | 20.0% |
!! | AAATCAGATATTAACTTAGA+TGG | + | chr3_1:90796631-90796650 | None:intergenic | 20.0% |
!!! | ATTTTTTTTGTTTTTCTGTC+TGG | + | chr3_1:90796813-90796832 | None:intergenic | 20.0% |
!! | GAAAAACAAAAAAAATCCTT+TGG | - | chr3_1:90796817-90796836 | Msa0386960:intron | 20.0% |
!!! | GAATTCAAATCATTTTATAC+AGG | + | chr3_1:90797188-90797207 | None:intergenic | 20.0% |
!!! | ATGACTTATAAATATCGATT+AGG | - | chr3_1:90798070-90798089 | Msa0386960:intron | 20.0% |
!!! | TTGCAAAACGTTTTTTTTAA+AGG | - | chr3_1:90798182-90798201 | Msa0386960:intron | 20.0% |
!!! | TTTTTTTATAATTGGGTCAA+CGG | - | chr3_1:90798271-90798290 | Msa0386960:intron | 20.0% |
!!! | CCAAAAATAAAAAATTTTGC+AGG | + | chr3_1:90798575-90798594 | None:intergenic | 20.0% |
!!! | CCTGCAAAATTTTTTATTTT+TGG | - | chr3_1:90798572-90798591 | Msa0386960:intron | 20.0% |
!!! | TTATATTTTGTTTGTTTCAG+AGG | - | chr3_1:90799131-90799150 | Msa0386960:CDS | 20.0% |
!!! | TATATTTTGTTTGTTTCAGA+GGG | - | chr3_1:90799132-90799151 | Msa0386960:CDS | 20.0% |
!!! | TTCATTGCTCTAAAATTTAA+TGG | - | chr3_1:90799618-90799637 | Msa0386960:intron | 20.0% |
!!! | CATTTCAATGATGTTTTATT+TGG | - | chr3_1:90800089-90800108 | Msa0386960:intron | 20.0% |
!! | TAATTGAAATTCATTTGAAC+GGG | - | chr3_1:90800228-90800247 | Msa0386960:intron | 20.0% |
!!! | AAAATACACGGATTAATTAA+AGG | - | chr3_1:90800369-90800388 | Msa0386960:intron | 20.0% |
!!! | AAATACACGGATTAATTAAA+GGG | - | chr3_1:90800370-90800389 | Msa0386960:intron | 20.0% |
!! | AGATTACATTCACATTATAA+AGG | + | chr3_1:90800916-90800935 | None:intergenic | 20.0% |
!! | ATTAACTCAATCATACAAAA+CGG | + | chr3_1:90801653-90801672 | None:intergenic | 20.0% |
!!! | TATATTTTGTTTGGTATTGT+AGG | - | chr3_1:90796028-90796047 | Msa0386960:intron | 20.0% |
!!! | TACATTAGATATATAATGGA+CGG | - | chr3_1:90801954-90801973 | Msa0386960:exon | 20.0% |
! | GAAAAGAAAGATTGAATTGA+AGG | + | chr3_1:90792332-90792351 | None:intergenic | 25.0% |
! | AAAGAGAAAGAGAAAATTAG+AGG | + | chr3_1:90792528-90792547 | None:intergenic | 25.0% |
!! | TATGATTTTTGTGTTGGAAA+TGG | - | chr3_1:90792978-90792997 | Msa0386960:intron | 25.0% |
!!! | TTTTGGTTAATGACAACTTT+AGG | - | chr3_1:90793084-90793103 | Msa0386960:intron | 25.0% |
! | AAGGAGCAAATAATAGATTT+CGG | + | chr3_1:90793301-90793320 | None:intergenic | 25.0% |
! | TCAATCATAACATAATCCAA+GGG | + | chr3_1:90793487-90793506 | None:intergenic | 25.0% |
! | TTCAATCATAACATAATCCA+AGG | + | chr3_1:90793488-90793507 | None:intergenic | 25.0% |
!!! | TATGATTGAAGCATTTTGAT+TGG | - | chr3_1:90793498-90793517 | Msa0386960:intron | 25.0% |
!! | TTCATTGCTCAAATTTTTCA+TGG | - | chr3_1:90793635-90793654 | Msa0386960:intron | 25.0% |
!! | AACTCTTTCCTATGATATTT+TGG | - | chr3_1:90793930-90793949 | Msa0386960:intron | 25.0% |
! | TCAAAAGAAACATAATTCTC+GGG | + | chr3_1:90794225-90794244 | None:intergenic | 25.0% |
!! | CAATAATAATTCTAGTTAGG+TGG | - | chr3_1:90794296-90794315 | Msa0386960:intron | 25.0% |
!! | TAATTCTAGTTAGGTGATTA+TGG | - | chr3_1:90794365-90794384 | Msa0386960:intron | 25.0% |
! | TTCATTTAAATAGGCTAACT+GGG | + | chr3_1:90794398-90794417 | None:intergenic | 25.0% |
! | ATTCATTTAAATAGGCTAAC+TGG | + | chr3_1:90794399-90794418 | None:intergenic | 25.0% |
! | ACTACGAATTGAATATATGA+TGG | - | chr3_1:90794444-90794463 | Msa0386960:intron | 25.0% |
! | ATTGAACAAATTAACGTAGT+TGG | - | chr3_1:90794483-90794502 | Msa0386960:intron | 25.0% |
! | ATGCTTAAAATTCACTTGAA+TGG | - | chr3_1:90794590-90794609 | Msa0386960:intron | 25.0% |
! | TGCTTAAAATTCACTTGAAT+GGG | - | chr3_1:90794591-90794610 | Msa0386960:intron | 25.0% |
!! | GAAGAGGATTAATTCTTTTT+GGG | - | chr3_1:90794776-90794795 | Msa0386960:intron | 25.0% |
!! | AAGAGGATTAATTCTTTTTG+GGG | - | chr3_1:90794777-90794796 | Msa0386960:intron | 25.0% |
!! | CAAATCTTTTCCATTTATCA+TGG | + | chr3_1:90795068-90795087 | None:intergenic | 25.0% |
! | TGATAAATGGAAAAGATTTG+AGG | - | chr3_1:90795068-90795087 | Msa0386960:CDS | 25.0% |
! | AAGCATAATATTTGTGATTC+AGG | - | chr3_1:90795189-90795208 | Msa0386960:CDS | 25.0% |
! | AAGATATCAAAGATCTTAAG+TGG | + | chr3_1:90795427-90795446 | None:intergenic | 25.0% |
! | TCTAATAATACATCTTACAC+AGG | + | chr3_1:90795460-90795479 | None:intergenic | 25.0% |
!!! | AGATTATCTGTTTTTAGACT+TGG | - | chr3_1:90795477-90795496 | Msa0386960:intron | 25.0% |
! | ATAAATTAACCCAAAAAAGG+TGG | + | chr3_1:90795654-90795673 | None:intergenic | 25.0% |
! | GGTTAATTTATGTTTCTTCA+AGG | - | chr3_1:90795663-90795682 | Msa0386960:intron | 25.0% |
!! | TCAAGGTTAATGCTAATTTT+AGG | - | chr3_1:90795680-90795699 | Msa0386960:intron | 25.0% |
! | AAATGTAGACCAAATATAGT+GGG | + | chr3_1:90795793-90795812 | None:intergenic | 25.0% |
! | AAAATGTAGACCAAATATAG+TGG | + | chr3_1:90795794-90795813 | None:intergenic | 25.0% |
! | CTAATTTAAAAGTCTGTCAA+TGG | - | chr3_1:90796228-90796247 | Msa0386960:intron | 25.0% |
!!! | TTTTTGAGAATCAAACAAGT+TGG | - | chr3_1:90796599-90796618 | Msa0386960:intron | 25.0% |
!!! | TTTTGAGAATCAAACAAGTT+GGG | - | chr3_1:90796600-90796619 | Msa0386960:intron | 25.0% |
! | ATATTCCAGATAAAACATGT+CGG | + | chr3_1:90796785-90796804 | None:intergenic | 25.0% |
!! | AAAATATACAGTTTTGCCAA+AGG | + | chr3_1:90796836-90796855 | None:intergenic | 25.0% |
! | GTAATGAAAAAGTTAAGATG+AGG | + | chr3_1:90796952-90796971 | None:intergenic | 25.0% |
! | TACATATGCTAACACAAAAA+TGG | + | chr3_1:90797595-90797614 | None:intergenic | 25.0% |
!! | AGTTGTAATGAAAACTGTTT+TGG | - | chr3_1:90797639-90797658 | Msa0386960:intron | 25.0% |
!! | TTGTTTATATTAATGACGGA+GGG | + | chr3_1:90797889-90797908 | None:intergenic | 25.0% |
! | TTTGTTTATATTAATGACGG+AGG | + | chr3_1:90797890-90797909 | None:intergenic | 25.0% |
!! | GACAATAGTTAACTCTATTT+TGG | - | chr3_1:90798139-90798158 | Msa0386960:intron | 25.0% |
!!! | TCTTTTGTGTCAGTTTTTTT+TGG | - | chr3_1:90798222-90798241 | Msa0386960:intron | 25.0% |
!! | TCAAAGATGTTGAACTTTTT+GGG | - | chr3_1:90798318-90798337 | Msa0386960:intron | 25.0% |
! | ACAAAAAGTTGGCTAAAATA+TGG | + | chr3_1:90798826-90798845 | None:intergenic | 25.0% |
!!! | AGCCAACTTTTTGTTATAAT+TGG | - | chr3_1:90798832-90798851 | Msa0386960:intron | 25.0% |
!!! | GCCAACTTTTTGTTATAATT+GGG | - | chr3_1:90798833-90798852 | Msa0386960:intron | 25.0% |
! | ACCCAATTATAACAAAAAGT+TGG | + | chr3_1:90798837-90798856 | None:intergenic | 25.0% |
! | AACTTGATTAGAACTTACTA+CGG | + | chr3_1:90799020-90799039 | None:intergenic | 25.0% |
!! | AACTTAGAGAGTGTAATAAT+AGG | + | chr3_1:90799516-90799535 | None:intergenic | 25.0% |
!!! | CTTTTTTGTTACAATGAAGA+AGG | - | chr3_1:90799559-90799578 | Msa0386960:intron | 25.0% |
! | TTTCTGTGTAATTATTTCAG+TGG | - | chr3_1:90800298-90800317 | Msa0386960:intron | 25.0% |
!! | TAGAGAATCTTTCTTCTTTT+AGG | - | chr3_1:90800511-90800530 | Msa0386960:intron | 25.0% |
!!! | ATTTTTTATGGTTTGTGAAG+AGG | + | chr3_1:90800803-90800822 | None:intergenic | 25.0% |
!! | TTAGTTTATTTGCTAAACCA+TGG | - | chr3_1:90800822-90800841 | Msa0386960:intron | 25.0% |
!! | TATGTAAATCCTTTTCAAAC+AGG | + | chr3_1:90800876-90800895 | None:intergenic | 25.0% |
! | AATGAAGTTGTCAATTCTTT+CGG | + | chr3_1:90801000-90801019 | None:intergenic | 25.0% |
!!! | TTGCAACTTTTTTTGAACTT+CGG | + | chr3_1:90801039-90801058 | None:intergenic | 25.0% |
! | TTAGGAATACCTTTGTATTT+GGG | + | chr3_1:90801085-90801104 | None:intergenic | 25.0% |
! | CTGATACCATCTTAAAATTT+GGG | + | chr3_1:90801450-90801469 | None:intergenic | 25.0% |
! | TCTGATACCATCTTAAAATT+TGG | + | chr3_1:90801451-90801470 | None:intergenic | 25.0% |
! | TTAACTCAATCATACAAAAC+GGG | + | chr3_1:90801652-90801671 | None:intergenic | 25.0% |
! | TCTATTTCACATAAGTCATT+AGG | + | chr3_1:90801815-90801834 | None:intergenic | 25.0% |
! | GGTGTACATTAGATATATAA+TGG | - | chr3_1:90801950-90801969 | Msa0386960:exon | 25.0% |
!!! | ACATTAGATATATAATGGAC+GGG | - | chr3_1:90801955-90801974 | Msa0386960:exon | 25.0% |
!!! | ATGGTTTGAAATTTTGTCAA+TGG | - | chr3_1:90802024-90802043 | Msa0386960:five_prime_UTR | 25.0% |
!!! | TTTGAAATTTTGTCAATGGT+TGG | - | chr3_1:90802028-90802047 | Msa0386960:five_prime_UTR | 25.0% |
! | CAAACTCTTTGATAGTAAGT+TGG | - | chr3_1:90792167-90792186 | Msa0386960:three_prime_UTR | 30.0% |
TAAAATGCTTTGTCTTTGAG+TGG | + | chr3_1:90792204-90792223 | None:intergenic | 30.0% | |
AAAAGAAGGTTATGGCAATT+TGG | + | chr3_1:90792296-90792315 | None:intergenic | 30.0% | |
AACAAATCTGTCACAATCAA+AGG | - | chr3_1:90792473-90792492 | Msa0386960:intron | 30.0% | |
!! | TGATTTTTGTTTGTTTCAGC+TGG | - | chr3_1:90792556-90792575 | Msa0386960:intron | 30.0% |
!! | GATTTTTGTTTGTTTCAGCT+GGG | - | chr3_1:90792557-90792576 | Msa0386960:intron | 30.0% |
!! | ATTTTTGTTTGTTTCAGCTG+GGG | - | chr3_1:90792558-90792577 | Msa0386960:intron | 30.0% |
! | CCTAATAGCTTTCATTTTAG+AGG | + | chr3_1:90793267-90793286 | None:intergenic | 30.0% |
!! | CCTCTAAAATGAAAGCTATT+AGG | - | chr3_1:90793264-90793283 | Msa0386960:intron | 30.0% |
CAATCATAACATAATCCAAG+GGG | + | chr3_1:90793486-90793505 | None:intergenic | 30.0% | |
TTCAACAATGGATCTTTATC+TGG | - | chr3_1:90793594-90793613 | Msa0386960:intron | 30.0% | |
!! | TCAGTATCTGTTTGATTTTC+TGG | - | chr3_1:90793798-90793817 | Msa0386960:intron | 30.0% |
!! | ATACTTGTTTTCTTCACATG+AGG | + | chr3_1:90793862-90793881 | None:intergenic | 30.0% |
!!! | TCCTATGATATTTTGGTACT+TGG | - | chr3_1:90793937-90793956 | Msa0386960:intron | 30.0% |
ACCAAGTACCAAAATATCAT+AGG | + | chr3_1:90793941-90793960 | None:intergenic | 30.0% | |
!!! | TATGATATTTTGGTACTTGG+TGG | - | chr3_1:90793940-90793959 | Msa0386960:intron | 30.0% |
AATTCTTAATAGCAGCTCAT+AGG | - | chr3_1:90793983-90794002 | Msa0386960:intron | 30.0% | |
TAGATATGTGTATGCTTGTT+TGG | - | chr3_1:90794175-90794194 | Msa0386960:intron | 30.0% | |
CATGGCATATGATATGATAT+AGG | - | chr3_1:90794262-90794281 | Msa0386960:intron | 30.0% | |
!! | GTCATGTTATTTAGCTTTGT+TGG | - | chr3_1:90794318-90794337 | Msa0386960:intron | 30.0% |
TCCACTTGGATAGATATTTA+CGG | + | chr3_1:90794653-90794672 | None:intergenic | 30.0% | |
GCATATTTCAAATATCCACT+TGG | + | chr3_1:90794667-90794686 | None:intergenic | 30.0% | |
TCAAACAAATTAAGGGTAAG+TGG | - | chr3_1:90794687-90794706 | Msa0386960:intron | 30.0% | |
! | TAATGAAGATCTGAAATGCT+GGG | - | chr3_1:90794711-90794730 | Msa0386960:intron | 30.0% |
!! | GTTCTTTTTAGAAGAAGAAG+AGG | - | chr3_1:90794751-90794770 | Msa0386960:intron | 30.0% |
! | GGAAGAGGATTAATTCTTTT+TGG | - | chr3_1:90794775-90794794 | Msa0386960:intron | 30.0% |
ATCTAGTCCTTTCTTATTCT+GGG | - | chr3_1:90794800-90794819 | Msa0386960:intron | 30.0% | |
ATCTTCTGTGTAATTATTCC+TGG | - | chr3_1:90794829-90794848 | Msa0386960:intron | 30.0% | |
TATTGGAGACATGATCAATT+TGG | - | chr3_1:90795027-90795046 | Msa0386960:intron | 30.0% | |
! | ATGGAAAAGATTTGAGGTTT+CGG | - | chr3_1:90795074-90795093 | Msa0386960:CDS | 30.0% |
TTTGCAAGAGACCTTTATAA+TGG | - | chr3_1:90795135-90795154 | Msa0386960:CDS | 30.0% | |
TTGCAAGAGACCTTTATAAT+GGG | - | chr3_1:90795136-90795155 | Msa0386960:CDS | 30.0% | |
AACAACTTTCACAAAAGAAG+TGG | + | chr3_1:90795265-90795284 | None:intergenic | 30.0% | |
TATGAGAATATAACTAGGCA+TGG | - | chr3_1:90795519-90795538 | Msa0386960:intron | 30.0% | |
!!! | TATCTACTTCCACCTTTTTT+GGG | - | chr3_1:90795642-90795661 | Msa0386960:intron | 30.0% |
! | CCATATATGATTGTTTTCCA+TGG | + | chr3_1:90795913-90795932 | None:intergenic | 30.0% |
CCATGGAAAACAATCATATA+TGG | - | chr3_1:90795910-90795929 | Msa0386960:intron | 30.0% | |
!! | TTTTTCTGGTGACAAAAGAA+AGG | - | chr3_1:90795988-90796007 | Msa0386960:intron | 30.0% |
!! | ATTTTGTTTGGTATTGTAGG+TGG | - | chr3_1:90796031-90796050 | Msa0386960:intron | 30.0% |
GTTATGTAAGGCTTAAAAAG+AGG | - | chr3_1:90796084-90796103 | Msa0386960:intron | 30.0% | |
AAAAAGAGGTAGATCTGTAA+TGG | - | chr3_1:90796098-90796117 | Msa0386960:intron | 30.0% | |
ATAGTCTTTCTCTACTTTCA+TGG | - | chr3_1:90796194-90796213 | Msa0386960:intron | 30.0% | |
TTTACTAAAGTAGTGTCTAC+TGG | + | chr3_1:90796401-90796420 | None:intergenic | 30.0% | |
AGTAGACACTACTTTAGTAA+AGG | - | chr3_1:90796400-90796419 | Msa0386960:intron | 30.0% | |
GAAATTAAAAGGGACAAAAC+TGG | - | chr3_1:90796500-90796519 | Msa0386960:intron | 30.0% | |
TTTGAGAATCAAACAAGTTG+GGG | - | chr3_1:90796601-90796620 | Msa0386960:intron | 30.0% | |
! | TAAAACATGTCGGGATATTT+TGG | + | chr3_1:90796775-90796794 | None:intergenic | 30.0% |
TATTCCAGATAAAACATGTC+GGG | + | chr3_1:90796784-90796803 | None:intergenic | 30.0% | |
TAACAGTCTTAATGACATAG+AGG | + | chr3_1:90796881-90796900 | None:intergenic | 30.0% | |
AATAAACTTAAGCGTGTTGA+GGG | + | chr3_1:90796974-90796993 | None:intergenic | 30.0% | |
TAATAAACTTAAGCGTGTTG+AGG | + | chr3_1:90796975-90796994 | None:intergenic | 30.0% | |
TGTCTGATACTTCATGTTTA+CGG | - | chr3_1:90797027-90797046 | Msa0386960:intron | 30.0% | |
TCACTAAAACATCACTTGAT+GGG | + | chr3_1:90797348-90797367 | None:intergenic | 30.0% | |
TTGATCTCCACTAAAAATGA+AGG | - | chr3_1:90797492-90797511 | Msa0386960:intron | 30.0% | |
TGTGTTAGCATATGTAACTA+TGG | - | chr3_1:90797599-90797618 | Msa0386960:intron | 30.0% | |
TTCACATATAACGTCAATGT+TGG | + | chr3_1:90797811-90797830 | None:intergenic | 30.0% | |
!! | TTTTAATTGGGATTAACGGT+AGG | + | chr3_1:90797856-90797875 | None:intergenic | 30.0% |
!! | GCACTTTTAATTGGGATTAA+CGG | + | chr3_1:90797860-90797879 | None:intergenic | 30.0% |
GATTCATTAAATGGTGTATG+TGG | - | chr3_1:90797927-90797946 | Msa0386960:intron | 30.0% | |
TTGTTTATAATAGTGACTGC+AGG | - | chr3_1:90797992-90798011 | Msa0386960:intron | 30.0% | |
TGTTTATAATAGTGACTGCA+GGG | - | chr3_1:90797993-90798012 | Msa0386960:intron | 30.0% | |
! | GTCAAAGATGTTGAACTTTT+TGG | - | chr3_1:90798317-90798336 | Msa0386960:intron | 30.0% |
!! | GAACTTTTTGGGCTAAAATA+TGG | - | chr3_1:90798329-90798348 | Msa0386960:intron | 30.0% |
TTTGGGCTAAAATATGGTAT+TGG | - | chr3_1:90798335-90798354 | Msa0386960:intron | 30.0% | |
!!! | TTATTTTTGGAAATAGTCCC+TGG | - | chr3_1:90798585-90798604 | Msa0386960:intron | 30.0% |
!!! | TTGTCACTTTTGTGCATATT+GGG | + | chr3_1:90798612-90798631 | None:intergenic | 30.0% |
!!! | TTTGTCACTTTTGTGCATAT+TGG | + | chr3_1:90798613-90798632 | None:intergenic | 30.0% |
AGTTGGCTAAAATATGGTAT+TGG | + | chr3_1:90798820-90798839 | None:intergenic | 30.0% | |
AAAACAACAAAGGTGATAAG+GGG | + | chr3_1:90798920-90798939 | None:intergenic | 30.0% | |
CAAAACAACAAAGGTGATAA+GGG | + | chr3_1:90798921-90798940 | None:intergenic | 30.0% | |
ACAAAACAACAAAGGTGATA+AGG | + | chr3_1:90798922-90798941 | None:intergenic | 30.0% | |
! | AAGAGAGTACAAAACAACAA+AGG | + | chr3_1:90798930-90798949 | None:intergenic | 30.0% |
! | CTCTGATTAATTGTACTGAT+AGG | - | chr3_1:90799064-90799083 | Msa0386960:CDS | 30.0% |
TTGTTTGAATTTCAGACTTC+TGG | - | chr3_1:90799774-90799793 | Msa0386960:intron | 30.0% | |
TTGTTCATGACATGTGATAT+AGG | - | chr3_1:90799841-90799860 | Msa0386960:intron | 30.0% | |
! | AGACAACAATACTTCTAGTT+AGG | - | chr3_1:90799872-90799891 | Msa0386960:intron | 30.0% |
!!! | TGAGGGGTGTTTTTTTTTTT+GGG | + | chr3_1:90800700-90800719 | None:intergenic | 30.0% |
!!! | TTGAGGGGTGTTTTTTTTTT+TGG | + | chr3_1:90800701-90800720 | None:intergenic | 30.0% |
! | ATTTGCTAAACCATGGTAAA+TGG | - | chr3_1:90800829-90800848 | Msa0386960:intron | 30.0% |
TTTGCTAAACCATGGTAAAT+GGG | - | chr3_1:90800830-90800849 | Msa0386960:intron | 30.0% | |
CAAATATTTCCCATTTACCA+TGG | + | chr3_1:90800842-90800861 | None:intergenic | 30.0% | |
TGGTAAATGGGAAATATTTG+AGG | - | chr3_1:90800842-90800861 | Msa0386960:intron | 30.0% | |
!! | GTTTTAGTACCTGTTTGAAA+AGG | - | chr3_1:90800864-90800883 | Msa0386960:intron | 30.0% |
CAGCATAATATTTGTGATTC+AGG | - | chr3_1:90800937-90800956 | Msa0386960:intron | 30.0% | |
GTTAGGAATACCTTTGTATT+TGG | + | chr3_1:90801086-90801105 | None:intergenic | 30.0% | |
CTAAAACTGTCAAACAATAG+TGG | + | chr3_1:90801108-90801127 | None:intergenic | 30.0% | |
!! | GGTATTAAGTGTTGAAAACA+AGG | + | chr3_1:90801136-90801155 | None:intergenic | 30.0% |
ACCATTTGAATTTACTTACC+TGG | - | chr3_1:90801153-90801172 | Msa0386960:intron | 30.0% | |
GATGAAGATATCAAAGATCT+CGG | + | chr3_1:90801182-90801201 | None:intergenic | 30.0% | |
TAATTCCTATTCCAATGTGT+TGG | - | chr3_1:90801220-90801239 | Msa0386960:intron | 30.0% | |
AATTTCCAACACATTGGAAT+AGG | + | chr3_1:90801228-90801247 | None:intergenic | 30.0% | |
AAACAGAATTTCCAACACAT+TGG | + | chr3_1:90801234-90801253 | None:intergenic | 30.0% | |
! | ACCATCTTAAAATTTGGGTT+GGG | + | chr3_1:90801445-90801464 | None:intergenic | 30.0% |
TACCATCTTAAAATTTGGGT+TGG | + | chr3_1:90801446-90801465 | None:intergenic | 30.0% | |
! | CATAACACTTCAGGTTTATT+GGG | + | chr3_1:90801542-90801561 | None:intergenic | 30.0% |
ATATATCCATATTTCTCAGC+TGG | + | chr3_1:90801717-90801736 | None:intergenic | 30.0% | |
GCTGAGAAATATGGATATAT+CGG | - | chr3_1:90801717-90801736 | Msa0386960:CDS | 30.0% | |
TATAAGATTGTGTCTTTCCA+TGG | + | chr3_1:90801764-90801783 | None:intergenic | 30.0% | |
!! | ATTTTGTTTGGTATTGTAGG+TGG | - | chr3_1:90796031-90796050 | Msa0386960:intron | 30.0% |
GAAAGTCTTAATGTGTATAC+TGG | + | chr3_1:90802204-90802223 | None:intergenic | 30.0% | |
! | ATCAAAGAGTTTGACTTTCG+AGG | + | chr3_1:90792160-90792179 | None:intergenic | 35.0% |
GTAGTTAAAGAGAAGTAGAG+GGG | + | chr3_1:90792274-90792293 | None:intergenic | 35.0% | |
GGTAGTTAAAGAGAAGTAGA+GGG | + | chr3_1:90792275-90792294 | None:intergenic | 35.0% | |
TGGTAGTTAAAGAGAAGTAG+AGG | + | chr3_1:90792276-90792295 | None:intergenic | 35.0% | |
CTAACGTTAAAGTTAACGTC+CGG | - | chr3_1:90792665-90792684 | Msa0386960:intron | 35.0% | |
! | GAAGGAAAGTGTATTGTTCA+TGG | - | chr3_1:90792793-90792812 | Msa0386960:intron | 35.0% |
TTTGAGTACAATTCTGCTAC+TGG | - | chr3_1:90792871-90792890 | Msa0386960:intron | 35.0% | |
CTATTATTTGCTCCTTCGAT+TGG | - | chr3_1:90793305-90793324 | Msa0386960:CDS | 35.0% | |
ATGGATCTTTATCTGGATTC+TGG | - | chr3_1:90793601-90793620 | Msa0386960:intron | 35.0% | |
! | TTGCTCAAATTTTTCATGGC+AGG | - | chr3_1:90793639-90793658 | Msa0386960:intron | 35.0% |
TTTAAGTCGGCATTAACCAT+AGG | - | chr3_1:90793882-90793901 | Msa0386960:intron | 35.0% | |
AAGGAAAAATGATGCTCCTA+TGG | + | chr3_1:90793901-90793920 | None:intergenic | 35.0% | |
GTCCTGTATAAGAAGAACAA+GGG | + | chr3_1:90794129-90794148 | None:intergenic | 35.0% | |
AGTCCTGTATAAGAAGAACA+AGG | + | chr3_1:90794130-90794149 | None:intergenic | 35.0% | |
GTGTATGCTTGTTTGGATTA+TGG | - | chr3_1:90794182-90794201 | Msa0386960:intron | 35.0% | |
AGAAATAAGCAATGAGACAC+CGG | + | chr3_1:90794532-90794551 | None:intergenic | 35.0% | |
CCACTTGGATAGATATTTAC+GGG | + | chr3_1:90794652-90794671 | None:intergenic | 35.0% | |
! | CTAATGAAGATCTGAAATGC+TGG | - | chr3_1:90794710-90794729 | Msa0386960:intron | 35.0% |
!! | CTTTTTAGAAGAAGAAGAGG+AGG | - | chr3_1:90794754-90794773 | Msa0386960:intron | 35.0% |
GATCTAGTCCTTTCTTATTC+TGG | - | chr3_1:90794799-90794818 | Msa0386960:intron | 35.0% | |
TTCTGTGTAATTATTCCTGG+TGG | - | chr3_1:90794832-90794851 | Msa0386960:intron | 35.0% | |
! | CTTTAATTAGTCTGTGCATG+TGG | + | chr3_1:90794877-90794896 | None:intergenic | 35.0% |
CTGTTGTGACAAACTTAATG+TGG | - | chr3_1:90794925-90794944 | Msa0386960:CDS | 35.0% | |
TGCAAGAGACCTTTATAATG+GGG | - | chr3_1:90795137-90795156 | Msa0386960:CDS | 35.0% | |
! | ACCTTTATAATGGGGATATC+AGG | - | chr3_1:90795145-90795164 | Msa0386960:CDS | 35.0% |
AAAGAAGTGGTCAAGTCTTT+CGG | + | chr3_1:90795252-90795271 | None:intergenic | 35.0% | |
CTCATACTATCAAACAACAG+TGG | + | chr3_1:90795362-90795381 | None:intergenic | 35.0% | |
ATCAAAGATCTTAAGTGGTC+AGG | + | chr3_1:90795422-90795441 | None:intergenic | 35.0% | |
!!! | GTATCTACTTCCACCTTTTT+TGG | - | chr3_1:90795641-90795660 | Msa0386960:intron | 35.0% |
GAAGCTTTGCCTACTTTAAT+GGG | + | chr3_1:90795738-90795757 | None:intergenic | 35.0% | |
CAAAAGTCTGAGTATGAACA+AGG | + | chr3_1:90796354-90796373 | None:intergenic | 35.0% | |
! | TTGAGAATCAAACAAGTTGG+GGG | - | chr3_1:90796602-90796621 | Msa0386960:intron | 35.0% |
CTTATAGAGCATATCTAGCA+TGG | - | chr3_1:90796680-90796699 | Msa0386960:intron | 35.0% | |
ATCTAGCATGGAGAAATTAG+TGG | - | chr3_1:90796692-90796711 | Msa0386960:intron | 35.0% | |
! | GGGTAATTTCAGATTTTCGA+GGG | + | chr3_1:90796747-90796766 | None:intergenic | 35.0% |
! | GAAAATCTGAAATTACCCGT+TGG | - | chr3_1:90796749-90796768 | Msa0386960:intron | 35.0% |
! | ATATCCCGACATGTTTTATC+TGG | - | chr3_1:90796777-90796796 | Msa0386960:intron | 35.0% |
! | ATATTTTGCTCATCCAGATG+TGG | - | chr3_1:90796849-90796868 | Msa0386960:intron | 35.0% |
! | AGTAACTCACTCGTGTATTT+TGG | + | chr3_1:90797217-90797236 | None:intergenic | 35.0% |
CTCACTAAAACATCACTTGA+TGG | + | chr3_1:90797349-90797368 | None:intergenic | 35.0% | |
ACACACACACATTTCAGTTT+AGG | - | chr3_1:90797399-90797418 | Msa0386960:intron | 35.0% | |
ATCTCCACTAAAAATGAAGG+AGG | - | chr3_1:90797495-90797514 | Msa0386960:intron | 35.0% | |
!! | TGATCCTCCTTCATTTTTAG+TGG | + | chr3_1:90797502-90797521 | None:intergenic | 35.0% |
AAGGAGGATCAACTGAAATT+AGG | - | chr3_1:90797511-90797530 | Msa0386960:intron | 35.0% | |
ATGCTAACACAAAAATGGCA+TGG | + | chr3_1:90797590-90797609 | None:intergenic | 35.0% | |
!! | GTATGGTTGATGAATCAGAT+TGG | - | chr3_1:90797672-90797691 | Msa0386960:intron | 35.0% |
GATTGCAAATACAGATCAAG+TGG | - | chr3_1:90797766-90797785 | Msa0386960:intron | 35.0% | |
!! | GGTGTAGAGCACTTTTAATT+GGG | + | chr3_1:90797868-90797887 | None:intergenic | 35.0% |
! | ATTTTGGATTGTAAAAGCCG+TGG | - | chr3_1:90798155-90798174 | Msa0386960:intron | 35.0% |
! | AAACGTTTTGCAAAAGACCA+CGG | + | chr3_1:90798175-90798194 | None:intergenic | 35.0% |
!!! | AAATAGGCCAGTTTTGGTTT+TGG | - | chr3_1:90798366-90798385 | Msa0386960:intron | 35.0% |
!!! | AAATAGGCCAGTTTTGGTTT+TGG | - | chr3_1:90798366-90798385 | Msa0386960:intron | 35.0% |
! | CAAAACTGACCTATTTTGCA+GGG | + | chr3_1:90798513-90798532 | None:intergenic | 35.0% |
!!! | TGTCACTTTTGTGCATATTG+GGG | + | chr3_1:90798611-90798630 | None:intergenic | 35.0% |
!! | CAAAACTGGCCTATTTTGTA+GGG | - | chr3_1:90798674-90798693 | Msa0386960:intron | 35.0% |
!!! | GTTTTTGGTCCCTACAAAAT+AGG | + | chr3_1:90798686-90798705 | None:intergenic | 35.0% |
!! | CAAAACTGGTCTATTTTGCA+GGG | - | chr3_1:90798733-90798752 | Msa0386960:intron | 35.0% |
!!! | AAATAGGCCAGTTTTGGTTT+TGG | + | chr3_1:90798366-90798385 | None:intergenic | 35.0% |
AACGGCATATCTGAATTCAT+TGG | + | chr3_1:90798997-90799016 | None:intergenic | 35.0% | |
GATTAGAACTTACTACGGAA+CGG | + | chr3_1:90799015-90799034 | None:intergenic | 35.0% | |
AAAATGCACTGTTCACAGTT+TGG | - | chr3_1:90799362-90799381 | Msa0386960:intron | 35.0% | |
TACATGAAGCTTGATGTTGT+TGG | - | chr3_1:90799390-90799409 | Msa0386960:intron | 35.0% | |
ACTCACACTTGAACTATATC+AGG | + | chr3_1:90799471-90799490 | None:intergenic | 35.0% | |
TTGTTACAATGAAGAAGGTG+TGG | - | chr3_1:90799564-90799583 | Msa0386960:intron | 35.0% | |
! | TGTTACAATGAAGAAGGTGT+GGG | - | chr3_1:90799565-90799584 | Msa0386960:intron | 35.0% |
ATAACTTCATCAGGGTTGTA+GGG | + | chr3_1:90799666-90799685 | None:intergenic | 35.0% | |
ACTGGATCATAACTTCATCA+GGG | + | chr3_1:90799674-90799693 | None:intergenic | 35.0% | |
GAACTGTATAAGCAGAACAA+GGG | + | chr3_1:90799729-90799748 | None:intergenic | 35.0% | |
AGAACTGTATAAGCAGAACA+AGG | + | chr3_1:90799730-90799749 | None:intergenic | 35.0% | |
! | CAACAATACTTCTAGTTAGG+TGG | - | chr3_1:90799875-90799894 | Msa0386960:intron | 35.0% |
ATATGTCGTGCTAAAGTTCA+TGG | - | chr3_1:90799916-90799935 | Msa0386960:intron | 35.0% | |
CTTAGAGCTAAGGAAGAAAT+TGG | + | chr3_1:90800263-90800282 | None:intergenic | 35.0% | |
!! | CAATTTCTTCCTTAGCTCTA+AGG | - | chr3_1:90800261-90800280 | Msa0386960:intron | 35.0% |
!! | ATCATTAACTTGTGCCTTGA+GGG | + | chr3_1:90800411-90800430 | None:intergenic | 35.0% |
!! | AATCATTAACTTGTGCCTTG+AGG | + | chr3_1:90800412-90800431 | None:intergenic | 35.0% |
!! | AGTGTTAACTTGTGTCCTTA+GGG | + | chr3_1:90800551-90800570 | None:intergenic | 35.0% |
!! | TAGTGTTAACTTGTGTCCTT+AGG | + | chr3_1:90800552-90800571 | None:intergenic | 35.0% |
!! | TTTGGTGGGTTATCTATCTA+TGG | + | chr3_1:90800593-90800612 | None:intergenic | 35.0% |
!! | TTTTTAGGGGTGATGAGTTT+TGG | + | chr3_1:90800611-90800630 | None:intergenic | 35.0% |
!! | ACAATGCTTGCTTTTGTGAA+GGG | + | chr3_1:90800639-90800658 | None:intergenic | 35.0% |
!! | AACAATGCTTGCTTTTGTGA+AGG | + | chr3_1:90800640-90800659 | None:intergenic | 35.0% |
!!! | GAGGGGTGTTTTTTTTTTTG+GGG | + | chr3_1:90800699-90800718 | None:intergenic | 35.0% |
ACTGTCAAACAATAGTGGTT+AGG | + | chr3_1:90801103-90801122 | None:intergenic | 35.0% | |
GCCAGGTAAGTAAATTCAAA+TGG | + | chr3_1:90801157-90801176 | None:intergenic | 35.0% | |
TGGCATATGCAGTGTTTATA+AGG | - | chr3_1:90801375-90801394 | Msa0386960:intron | 35.0% | |
TATGCAGTGTTTATAAGGCT+TGG | - | chr3_1:90801380-90801399 | Msa0386960:intron | 35.0% | |
ATGCAGTGTTTATAAGGCTT+GGG | - | chr3_1:90801381-90801400 | Msa0386960:intron | 35.0% | |
!!! | GTTACCTTACTGGTTTTGTT+AGG | - | chr3_1:90801409-90801428 | Msa0386960:intron | 35.0% |
TCAACCTAACAAAACCAGTA+AGG | + | chr3_1:90801416-90801435 | None:intergenic | 35.0% | |
AGCCTATCTTATATCTGTTG+TGG | - | chr3_1:90801470-90801489 | Msa0386960:CDS | 35.0% | |
AGCCACAACAGATATAAGAT+AGG | + | chr3_1:90801475-90801494 | None:intergenic | 35.0% | |
AGGTTTATTGGGATAACACT+CGG | + | chr3_1:90801531-90801550 | None:intergenic | 35.0% | |
! | CCATAACACTTCAGGTTTAT+TGG | + | chr3_1:90801543-90801562 | None:intergenic | 35.0% |
! | CCAATAAACCTGAAGTGTTA+TGG | - | chr3_1:90801540-90801559 | Msa0386960:CDS | 35.0% |
! | ATAAACCTGAAGTGTTATGG+TGG | - | chr3_1:90801543-90801562 | Msa0386960:CDS | 35.0% |
GCAACACAAATGCCTTAATT+AGG | + | chr3_1:90801602-90801621 | None:intergenic | 35.0% | |
ACCATCACTTTCATCTTTGA+CGG | + | chr3_1:90801933-90801952 | None:intergenic | 35.0% | |
ACCAAGGATTTGAAAAGCTA+GGG | + | chr3_1:90801982-90802001 | None:intergenic | 35.0% | |
TACCAAGGATTTGAAAAGCT+AGG | + | chr3_1:90801983-90802002 | None:intergenic | 35.0% | |
! | TAGCTTTTCAAATCCTTGGT+AGG | - | chr3_1:90801982-90802001 | Msa0386960:five_prime_UTR | 35.0% |
AGCTGAATAAACTCTGACAA+TGG | - | chr3_1:90802005-90802024 | Msa0386960:five_prime_UTR | 35.0% | |
GTTTCTCCATATATCCTCAT+CGG | - | chr3_1:90802123-90802142 | Msa0386960:five_prime_UTR | 35.0% | |
TTTCTCCATATATCCTCATC+GGG | - | chr3_1:90802124-90802143 | Msa0386960:five_prime_UTR | 35.0% | |
CAAAAGTCTGAGTATGAACA+AGG | + | chr3_1:90796354-90796373 | None:intergenic | 35.0% | |
AACACAACACAACACAACCA+TGG | - | chr3_1:90792397-90792416 | Msa0386960:three_prime_UTR | 40.0% | |
ATGACTCTAGGTTTCGCTTT+GGG | + | chr3_1:90792436-90792455 | None:intergenic | 40.0% | |
TATGACTCTAGGTTTCGCTT+TGG | + | chr3_1:90792437-90792456 | None:intergenic | 40.0% | |
GTTTGACTGAGTATGACTCT+AGG | + | chr3_1:90792448-90792467 | None:intergenic | 40.0% | |
!! | CAGAGTGCTGATACAATTGA+AGG | - | chr3_1:90792775-90792794 | Msa0386960:intron | 40.0% |
TACACTAAGCTTGATGCTGT+TGG | - | chr3_1:90792826-90792845 | Msa0386960:intron | 40.0% | |
AGGTTTCATTCTCCAATCGA+AGG | + | chr3_1:90793320-90793339 | None:intergenic | 40.0% | |
! | TACAGAGTTGATCACCTGAA+TGG | - | chr3_1:90793363-90793382 | Msa0386960:CDS | 40.0% |
AAGAAGGATCATCACCATTC+AGG | + | chr3_1:90793380-90793399 | None:intergenic | 40.0% | |
ATCCTTCTTCTCCAATGCAA+AGG | - | chr3_1:90793391-90793410 | Msa0386960:CDS | 40.0% | |
TCCTTCTTCTCCAATGCAAA+GGG | - | chr3_1:90793392-90793411 | Msa0386960:CDS | 40.0% | |
TGAACTGAGGATAAGGATGA+TGG | + | chr3_1:90793530-90793549 | None:intergenic | 40.0% | |
CATCCAAATCAGGTTTACAG+CGG | + | chr3_1:90793556-90793575 | None:intergenic | 40.0% | |
!! | CTGTAAACCTGATTTGGATG+AGG | - | chr3_1:90793556-90793575 | Msa0386960:intron | 40.0% |
ATCAGATCATCAGGGTTGTA+GGG | + | chr3_1:90793683-90793702 | None:intergenic | 40.0% | |
ACTGAACCATCAGATCATCA+GGG | + | chr3_1:90793691-90793710 | None:intergenic | 40.0% | |
TTTCTGGACTCTTGTATGTC+TGG | - | chr3_1:90793814-90793833 | Msa0386960:intron | 40.0% | |
GGAAAGAGTTGTCTTACTCA+AGG | + | chr3_1:90793920-90793939 | None:intergenic | 40.0% | |
!! | GATTCTGCTTTGTTTCCTTC+TGG | - | chr3_1:90794036-90794055 | Msa0386960:intron | 40.0% |
TAAGAAGAACAAGGGAGAGT+AGG | + | chr3_1:90794121-90794140 | None:intergenic | 40.0% | |
CTCCCTTGTTCTTCTTATAC+AGG | - | chr3_1:90794124-90794143 | Msa0386960:intron | 40.0% | |
GCATGACATTTCTTTCACAC+TGG | - | chr3_1:90794505-90794524 | Msa0386960:intron | 40.0% | |
ACATTTCTTTCACACTGGTC+CGG | - | chr3_1:90794510-90794529 | Msa0386960:intron | 40.0% | |
GATAGATATTTACGGGACCT+CGG | + | chr3_1:90794645-90794664 | None:intergenic | 40.0% | |
CCCGTAAATATCTATCCAAG+TGG | - | chr3_1:90794649-90794668 | Msa0386960:intron | 40.0% | |
AAATGCTGGGAAAGATTCAG+AGG | - | chr3_1:90794724-90794743 | Msa0386960:intron | 40.0% | |
TAGTCCTTTCTTATTCTGGG+AGG | - | chr3_1:90794803-90794822 | Msa0386960:intron | 40.0% | |
! | AGTCCTTTCTTATTCTGGGA+GGG | - | chr3_1:90794804-90794823 | Msa0386960:intron | 40.0% |
GGAGACATGATCAATTTGGA+TGG | - | chr3_1:90795031-90795050 | Msa0386960:intron | 40.0% | |
CATATAAACCCTCATCGAAC+AGG | + | chr3_1:90795102-90795121 | None:intergenic | 40.0% | |
GCCTGATATCCCCATTATAA+AGG | + | chr3_1:90795149-90795168 | None:intergenic | 40.0% | |
ACAGTCATGTCTATACAAGC+AGG | + | chr3_1:90795221-90795240 | None:intergenic | 40.0% | |
TGCTTGTATAGACATGACTG+TGG | - | chr3_1:90795220-90795239 | Msa0386960:intron | 40.0% | |
TTGTATAGACATGACTGTGG+AGG | - | chr3_1:90795223-90795242 | Msa0386960:intron | 40.0% | |
TGTGAAAGTTGTTCCGTTGA+AGG | - | chr3_1:90795272-90795291 | Msa0386960:intron | 40.0% | |
!!! | CAGCTGTTTTTGACCTTCAA+CGG | + | chr3_1:90795288-90795307 | None:intergenic | 40.0% |
TACAAGACTCGCAGATACAA+AGG | - | chr3_1:90795325-90795344 | Msa0386960:intron | 40.0% | |
CTTAAGCTGCCCATTAAAGT+AGG | - | chr3_1:90795726-90795745 | Msa0386960:intron | 40.0% | |
CGAAGCTTTGCCTACTTTAA+TGG | + | chr3_1:90795739-90795758 | None:intergenic | 40.0% | |
ATATCTGCATGCTTCTCCTT+AGG | - | chr3_1:90795882-90795901 | Msa0386960:intron | 40.0% | |
CATAACATCGCTTCTACCTT+CGG | + | chr3_1:90796070-90796089 | None:intergenic | 40.0% | |
GGTAGAAGCGATGTTATGTA+AGG | - | chr3_1:90796072-90796091 | Msa0386960:intron | 40.0% | |
AAGAGGTAGATCTGTAATGG+AGG | - | chr3_1:90796101-90796120 | Msa0386960:intron | 40.0% | |
! | AGAGGTAGATCTGTAATGGA+GGG | - | chr3_1:90796102-90796121 | Msa0386960:intron | 40.0% |
!! | ACCCTTGCTTTTGTAATCCT+GGG | - | chr3_1:90796126-90796145 | Msa0386960:intron | 40.0% |
ACCCAGGATTACAAAAGCAA+GGG | + | chr3_1:90796130-90796149 | None:intergenic | 40.0% | |
TACCCAGGATTACAAAAGCA+AGG | + | chr3_1:90796131-90796150 | None:intergenic | 40.0% | |
!! | TTGCTTTTGTAATCCTGGGT+AGG | - | chr3_1:90796130-90796149 | Msa0386960:intron | 40.0% |
CTGAACAAACTCTGTGACAA+TGG | - | chr3_1:90796155-90796174 | Msa0386960:intron | 40.0% | |
GATTCTCTATCTATCCCCAT+CGG | - | chr3_1:90796326-90796345 | Msa0386960:intron | 40.0% | |
ATTCTCTATCTATCCCCATC+GGG | - | chr3_1:90796327-90796346 | Msa0386960:intron | 40.0% | |
TACTTGACACGCTGCTAATT+TGG | - | chr3_1:90796651-90796670 | Msa0386960:intron | 40.0% | |
! | CGGGTAATTTCAGATTTTCG+AGG | + | chr3_1:90796748-90796767 | None:intergenic | 40.0% |
AAATGGCATGGATCATGTTG+TGG | + | chr3_1:90797578-90797597 | None:intergenic | 40.0% | |
!!! | AAACTGTTTTGGTCCTACGT+TGG | - | chr3_1:90797650-90797669 | Msa0386960:intron | 40.0% |
TTCATCAACCATACCAACGT+AGG | + | chr3_1:90797666-90797685 | None:intergenic | 40.0% | |
!! | GGGTGTAGAGCACTTTTAAT+TGG | + | chr3_1:90797869-90797888 | None:intergenic | 40.0% |
!! | CAAAACTGGCCTATTTTGCA+GGG | + | chr3_1:90798793-90798812 | None:intergenic | 40.0% |
!!! | GTTTTTGGTCCCTGCAAAAT+AGG | - | chr3_1:90798410-90798429 | Msa0386960:intron | 40.0% |
!! | CAAAACTGGCCTATTTTGCA+GGG | + | chr3_1:90798793-90798812 | None:intergenic | 40.0% |
!! | CAAAACTGGCCTATTTTGCA+GGG | + | chr3_1:90798793-90798812 | None:intergenic | 40.0% |
!!! | GTTTTTGGTCCCTGCAAAAT+AGG | - | chr3_1:90798410-90798429 | Msa0386960:intron | 40.0% |
! | CCAAAACTGACCTATTTTGC+AGG | + | chr3_1:90798514-90798533 | None:intergenic | 40.0% |
! | CCTGCAAAATAGGTCAGTTT+TGG | - | chr3_1:90798511-90798530 | Msa0386960:intron | 40.0% |
! | CCTACAAAATAGGCCAGTTT+TGG | + | chr3_1:90798676-90798695 | None:intergenic | 40.0% |
!! | CCAAAACTGGCCTATTTTGT+AGG | - | chr3_1:90798673-90798692 | Msa0386960:intron | 40.0% |
ACAGGGACTAAAACCAAAAC+TGG | - | chr3_1:90798719-90798738 | Msa0386960:intron | 40.0% | |
! | CCTGCAAAATAGACCAGTTT+TGG | + | chr3_1:90798735-90798754 | None:intergenic | 40.0% |
!! | CCAAAACTGGTCTATTTTGC+AGG | - | chr3_1:90798732-90798751 | Msa0386960:intron | 40.0% |
!! | CAAAACTGGCCTATTTTGCA+GGG | - | chr3_1:90798793-90798812 | Msa0386960:intron | 40.0% |
TCGATCATAGCCACATATGT+TGG | + | chr3_1:90799195-90799214 | None:intergenic | 40.0% | |
!! | CAGAGTGTTGATACAATCGA+AGG | - | chr3_1:90799339-90799358 | Msa0386960:intron | 40.0% |
TTGAACTACAATTCCGCTAC+TGG | - | chr3_1:90799435-90799454 | Msa0386960:intron | 40.0% | |
CATAACTTCATCAGGGTTGT+AGG | + | chr3_1:90799667-90799686 | None:intergenic | 40.0% | |
CACTGGATCATAACTTCATC+AGG | + | chr3_1:90799675-90799694 | None:intergenic | 40.0% | |
GAATCAGCAGATTGTACGAT+TGG | - | chr3_1:90799951-90799970 | Msa0386960:intron | 40.0% | |
AGAAGTAATGAGACACCAGA+CGG | + | chr3_1:90800163-90800182 | None:intergenic | 40.0% | |
CTCAAGTAGTAGCACATACA+CGG | - | chr3_1:90800324-90800343 | Msa0386960:intron | 40.0% | |
!! | AATGTTAACTTGTGCCCTCA+AGG | - | chr3_1:90800394-90800413 | Msa0386960:intron | 40.0% |
GTTTCTTAACATGTGCCCTA+AGG | - | chr3_1:90800533-90800552 | Msa0386960:intron | 40.0% | |
!!! | TGTGAAGGGGTCTGTTTTTA+GGG | + | chr3_1:90800625-90800644 | None:intergenic | 40.0% |
!! | TTGTGAAGGGGTCTGTTTTT+AGG | + | chr3_1:90800626-90800645 | None:intergenic | 40.0% |
!! | CAATGCTTGCTTTTGTGAAG+GGG | + | chr3_1:90800638-90800657 | None:intergenic | 40.0% |
ACCCCTCAAAATAAAACACC+CGG | - | chr3_1:90800712-90800731 | Msa0386960:intron | 40.0% | |
!!! | ACCGGGTGTTTTATTTTGAG+GGG | + | chr3_1:90800716-90800735 | None:intergenic | 40.0% |
!!! | GACCGGGTGTTTTATTTTGA+GGG | + | chr3_1:90800717-90800736 | None:intergenic | 40.0% |
TCCTTAGGATAAGTGCTCTT+CGG | + | chr3_1:90800763-90800782 | None:intergenic | 40.0% | |
! | TATGGTTTGTGAAGAGGTGT+GGG | + | chr3_1:90800797-90800816 | None:intergenic | 40.0% |
! | TTATGGTTTGTGAAGAGGTG+TGG | + | chr3_1:90800798-90800817 | None:intergenic | 40.0% |
TCCTGCTTGTATAGACATGA+CGG | - | chr3_1:90795217-90795236 | Msa0386960:intron | 40.0% | |
TGCAAGACTCCCAAATACAA+AGG | - | chr3_1:90801073-90801092 | Msa0386960:intron | 40.0% | |
GAAGATATCAAAGATCTCGG+AGG | + | chr3_1:90801179-90801198 | None:intergenic | 40.0% | |
!! | GCCCAACCCAAATTTTAAGA+TGG | - | chr3_1:90801441-90801460 | Msa0386960:intron | 40.0% |
GTCTACACTTCAGGCTTATT+GGG | - | chr3_1:90801504-90801523 | Msa0386960:CDS | 40.0% | |
ACTTTCCACCATAACACTTC+AGG | + | chr3_1:90801551-90801570 | None:intergenic | 40.0% | |
ATGCCTTAATTAGGCAGCTA+GGG | + | chr3_1:90801593-90801612 | None:intergenic | 40.0% | |
AATGCCTTAATTAGGCAGCT+AGG | + | chr3_1:90801594-90801613 | None:intergenic | 40.0% | |
! | ATCATACAAAACGGGCTTGA+GGG | + | chr3_1:90801644-90801663 | None:intergenic | 40.0% |
! | AATCATACAAAACGGGCTTG+AGG | + | chr3_1:90801645-90801664 | None:intergenic | 40.0% |
GTTTGACCAGCTGAGAAATA+TGG | - | chr3_1:90801708-90801727 | Msa0386960:CDS | 40.0% | |
ATATCGGCATGCTTCTCTAT+AGG | - | chr3_1:90801733-90801752 | Msa0386960:CDS | 40.0% | |
!! | ACCCTAGCTTTTCAAATCCT+TGG | - | chr3_1:90801978-90801997 | Msa0386960:five_prime_UTR | 40.0% |
AGTTTATTCAGCTCCTACCA+AGG | + | chr3_1:90801998-90802017 | None:intergenic | 40.0% | |
TATTCACCAGTGAATCGTGT+TGG | - | chr3_1:90802224-90802243 | Msa0386960:five_prime_UTR | 40.0% | |
TGCTTTGTCTTTGAGTGGCA+TGG | + | chr3_1:90792199-90792218 | None:intergenic | 45.0% | |
CGTGTGCTTTACACATCACA+CGG | + | chr3_1:90792233-90792252 | None:intergenic | 45.0% | |
AGAGAAGTAGAGGGGTTTGT+TGG | + | chr3_1:90792266-90792285 | None:intergenic | 45.0% | |
TGACTCTAGGTTTCGCTTTG+GGG | + | chr3_1:90792435-90792454 | None:intergenic | 45.0% | |
TCGATCTTTGCCACGTAAGA+GGG | + | chr3_1:90792619-90792638 | None:intergenic | 45.0% | |
TTCGATCTTTGCCACGTAAG+AGG | + | chr3_1:90792620-90792639 | None:intergenic | 45.0% | |
TCTTACGTGGCAAAGATCGA+AGG | - | chr3_1:90792619-90792638 | Msa0386960:intron | 45.0% | |
CTTACGTGGCAAAGATCGAA+GGG | - | chr3_1:90792620-90792639 | Msa0386960:intron | 45.0% | |
ACGTTAAAGTTAACGTCCGG+TGG | - | chr3_1:90792668-90792687 | Msa0386960:intron | 45.0% | |
TTAACGTCCGGTGGTATTAC+CGG | - | chr3_1:90792677-90792696 | Msa0386960:intron | 45.0% | |
TTGAACCGTGAAACTGTCTC+CGG | + | chr3_1:90792723-90792742 | None:intergenic | 45.0% | |
GAGACAGTTTCACGGTTCAA+AGG | - | chr3_1:90792723-90792742 | Msa0386960:intron | 45.0% | |
ACTCACACTGCAACTCTATC+AGG | + | chr3_1:90792907-90792926 | None:intergenic | 45.0% | |
GTGATCAACTCTGTATTCCG+AGG | + | chr3_1:90793358-90793377 | None:intergenic | 45.0% | |
CCTTCTTCTCCAATGCAAAG+GGG | - | chr3_1:90793393-90793412 | Msa0386960:CDS | 45.0% | |
AAGTGTCTACCCCTTTGCAT+TGG | + | chr3_1:90793405-90793424 | None:intergenic | 45.0% | |
GACACTTCGATGTCAAAGTG+AGG | - | chr3_1:90793418-90793437 | Msa0386960:intron | 45.0% | |
TTCGATGTCAAAGTGAGGCA+GGG | - | chr3_1:90793423-90793442 | Msa0386960:intron | 45.0% | |
CTCTAGTCCTCATCCAAATC+AGG | + | chr3_1:90793566-90793585 | None:intergenic | 45.0% | |
CATCAGATCATCAGGGTTGT+AGG | + | chr3_1:90793684-90793703 | None:intergenic | 45.0% | |
CTACAACCCTGATGATCTGA+TGG | - | chr3_1:90793682-90793701 | Msa0386960:intron | 45.0% | |
CACTGAACCATCAGATCATC+AGG | + | chr3_1:90793692-90793711 | None:intergenic | 45.0% | |
TGATCTGATGGTTCAGTGTG+AGG | - | chr3_1:90793694-90793713 | Msa0386960:intron | 45.0% | |
GATCTGATGGTTCAGTGTGA+GGG | - | chr3_1:90793695-90793714 | Msa0386960:intron | 45.0% | |
!! | CTCTTGTATGTCTGGTTCTG+TGG | - | chr3_1:90793822-90793841 | Msa0386960:intron | 45.0% |
AACAAGGGAGAGTAGGTTTG+GGG | + | chr3_1:90794114-90794133 | None:intergenic | 45.0% | |
GAACAAGGGAGAGTAGGTTT+GGG | + | chr3_1:90794115-90794134 | None:intergenic | 45.0% | |
AGAACAAGGGAGAGTAGGTT+TGG | + | chr3_1:90794116-90794135 | None:intergenic | 45.0% | |
CTCGGAGTTAAGGCAGAATT+TGG | + | chr3_1:90794627-90794646 | None:intergenic | 45.0% | |
CAAATTCTGCCTTAACTCCG+AGG | - | chr3_1:90794625-90794644 | Msa0386960:intron | 45.0% | |
AGAAGAAGAAGAGGAGGAAG+AGG | - | chr3_1:90794760-90794779 | Msa0386960:intron | 45.0% | |
! | GTCCTTTCTTATTCTGGGAG+GGG | - | chr3_1:90794805-90794824 | Msa0386960:intron | 45.0% |
TTCCCCTCCCAGAATAAGAA+AGG | + | chr3_1:90794810-90794829 | None:intergenic | 45.0% | |
TTTCGGTACCTGTTCGATGA+GGG | - | chr3_1:90795091-90795110 | Msa0386960:CDS | 45.0% | |
TGCTTGAATGCCTAATGAGC+AGG | - | chr3_1:90795767-90795786 | Msa0386960:intron | 45.0% | |
!! | ATATAGTGGGCCTGCTCATT+AGG | + | chr3_1:90795780-90795799 | None:intergenic | 45.0% |
ATGAGCAGGCCCACTATATT+TGG | - | chr3_1:90795781-90795800 | Msa0386960:intron | 45.0% | |
! | GTTTTCCATGGCTATGCCTA+AGG | + | chr3_1:90795901-90795920 | None:intergenic | 45.0% |
! | GAGGTAGATCTGTAATGGAG+GGG | - | chr3_1:90796103-90796122 | Msa0386960:intron | 45.0% |
!! | GACCCTTGCTTTTGTAATCC+TGG | - | chr3_1:90796125-90796144 | Msa0386960:intron | 45.0% |
AGTATCATCCCTGTTTCCCT+TGG | - | chr3_1:90796255-90796274 | Msa0386960:intron | 45.0% | |
AACACATCCTCCACTTCCAA+GGG | + | chr3_1:90796274-90796293 | None:intergenic | 45.0% | |
AAACACATCCTCCACTTCCA+AGG | + | chr3_1:90796275-90796294 | None:intergenic | 45.0% | |
AGTATGAACAAGGACCCGAT+GGG | + | chr3_1:90796344-90796363 | None:intergenic | 45.0% | |
GATGTCATCGTGTTCGTAGT+TGG | - | chr3_1:90796446-90796465 | Msa0386960:intron | 45.0% | |
TTTCGAGGGTCACTAGAACT+GGG | + | chr3_1:90796733-90796752 | None:intergenic | 45.0% | |
!! | TTTTCGAGGGTCACTAGAAC+TGG | + | chr3_1:90796734-90796753 | None:intergenic | 45.0% |
!!! | TGTCGGGATATTTTGGCCAA+CGG | + | chr3_1:90796768-90796787 | None:intergenic | 45.0% |
ATAGAGGATGATGCCACATC+TGG | + | chr3_1:90796865-90796884 | None:intergenic | 45.0% | |
! | CTACTCCATAGTTGAGTTGC+AGG | - | chr3_1:90797053-90797072 | Msa0386960:intron | 45.0% |
TACCTCCTGCAACTCAACTA+TGG | + | chr3_1:90797061-90797080 | None:intergenic | 45.0% | |
!! | GTTTTGGTCCTACGTTGGTA+TGG | - | chr3_1:90797655-90797674 | Msa0386960:intron | 45.0% |
!! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr3_1:90798350-90798369 | Msa0386960:intron | 45.0% |
!! | CCAAAACTGGCCTATTTTGC+AGG | + | chr3_1:90798792-90798811 | None:intergenic | 45.0% |
! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr3_1:90798360-90798379 | Msa0386960:intron | 45.0% |
!! | CCAAAACTGGCCTATTTTGC+AGG | + | chr3_1:90798792-90798811 | None:intergenic | 45.0% |
! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr3_1:90798360-90798379 | Msa0386960:intron | 45.0% |
!! | GGTTTTGGTCCCTGCAAAAT+AGG | - | chr3_1:90798441-90798460 | Msa0386960:intron | 45.0% |
!! | CCAAAACTGGCCTATTTTGC+AGG | + | chr3_1:90798792-90798811 | None:intergenic | 45.0% |
! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr3_1:90798360-90798379 | Msa0386960:intron | 45.0% |
! | TTTTGTGCATATTGGGGCCA+GGG | + | chr3_1:90798605-90798624 | None:intergenic | 45.0% |
GCAGGGACTAAAACCAAAAC+TGG | - | chr3_1:90798660-90798679 | Msa0386960:intron | 45.0% | |
ACAGGGACCAAAACCAAAAC+TGG | - | chr3_1:90798779-90798798 | Msa0386960:intron | 45.0% | |
! | CCTGCAAAATAGGCCAGTTT+TGG | + | chr3_1:90798360-90798379 | None:intergenic | 45.0% |
!! | CCAAAACTGGCCTATTTTGC+AGG | - | chr3_1:90798792-90798811 | Msa0386960:intron | 45.0% |
!! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr3_1:90798350-90798369 | None:intergenic | 45.0% |
TGTTGGTATCCACGGTTTAG+AGG | + | chr3_1:90799178-90799197 | None:intergenic | 45.0% | |
ACCGTGGATACCAACATATG+TGG | - | chr3_1:90799182-90799201 | Msa0386960:intron | 45.0% | |
GCCACATATGTTGGTATCCA+CGG | + | chr3_1:90799186-90799205 | None:intergenic | 45.0% | |
GAAAAAGCTCCTTTGAGCCA+TGG | + | chr3_1:90799299-90799318 | None:intergenic | 45.0% | |
GAAGTAATGAGACACCAGAC+GGG | + | chr3_1:90800162-90800181 | None:intergenic | 45.0% | |
!! | TTCCTTAGCTCTAAGGTCCT+GGG | - | chr3_1:90800268-90800287 | Msa0386960:intron | 45.0% |
TACACAGAAATTCTCCTCCC+AGG | + | chr3_1:90800288-90800307 | None:intergenic | 45.0% | |
!! | TAGGGGTGATGAGTTTTGGT+GGG | + | chr3_1:90800607-90800626 | None:intergenic | 45.0% |
!! | TTAGGGGTGATGAGTTTTGG+TGG | + | chr3_1:90800608-90800627 | None:intergenic | 45.0% |
!!! | GTGAAGGGGTCTGTTTTTAG+GGG | + | chr3_1:90800624-90800643 | None:intergenic | 45.0% |
! | GTAGTGACGATGAGTGGTTT+TGG | + | chr3_1:90800673-90800692 | None:intergenic | 45.0% |
!!! | GGACCGGGTGTTTTATTTTG+AGG | + | chr3_1:90800718-90800737 | None:intergenic | 45.0% |
!!! | TCAGGTTTGGTTTTAGGACC+GGG | + | chr3_1:90800733-90800752 | None:intergenic | 45.0% |
!!! | CTCAGGTTTGGTTTTAGGAC+CGG | + | chr3_1:90800734-90800753 | None:intergenic | 45.0% |
!!! | TGTGGCTCAGGTTTGGTTTT+AGG | + | chr3_1:90800739-90800758 | None:intergenic | 45.0% |
!! | TCCGAAGAGCACTTATCCTA+AGG | - | chr3_1:90800759-90800778 | Msa0386960:intron | 45.0% |
ACCGTCATGTCTATACAAGC+AGG | + | chr3_1:90800969-90800988 | None:intergenic | 45.0% | |
TGCTTGTATAGACATGACGG+TGG | - | chr3_1:90800968-90800987 | Msa0386960:intron | 45.0% | |
AGGATGCAATGAAGACAACC+CGG | + | chr3_1:90801294-90801313 | None:intergenic | 45.0% | |
TCCAACACCTTCGTTGTGTT+GGG | - | chr3_1:90801313-90801332 | Msa0386960:intron | 45.0% | |
TGATTTAGTCCCACTTTGCC+TGG | - | chr3_1:90801347-90801366 | Msa0386960:intron | 45.0% | |
ACTGCATATGCCATATGTCC+AGG | + | chr3_1:90801368-90801387 | None:intergenic | 45.0% | |
TTGGGTAGCAGTTACCTTAC+TGG | - | chr3_1:90801399-90801418 | Msa0386960:intron | 45.0% | |
TTTCGCATCGTCTACACTTC+AGG | - | chr3_1:90801495-90801514 | Msa0386960:CDS | 45.0% | |
CGTCTACACTTCAGGCTTAT+TGG | - | chr3_1:90801503-90801522 | Msa0386960:CDS | 45.0% | |
TGCCTTAATTAGGCAGCTAG+GGG | + | chr3_1:90801592-90801611 | None:intergenic | 45.0% | |
CTTCTCTATAGGCATAGCCA+TGG | - | chr3_1:90801744-90801763 | Msa0386960:CDS | 45.0% | |
GCCGTCAAAGATGAAAGTGA+TGG | - | chr3_1:90801929-90801948 | Msa0386960:CDS | 45.0% | |
GTAACCATCACTGTTTCCCT+AGG | - | chr3_1:90802052-90802071 | Msa0386960:five_prime_UTR | 45.0% | |
ACTACCTAGGGAAACAGTGA+TGG | + | chr3_1:90802059-90802078 | None:intergenic | 45.0% | |
ATCACTGTTTCCCTAGGTAG+TGG | - | chr3_1:90802058-90802077 | Msa0386960:five_prime_UTR | 45.0% | |
AACACATCCTCCACTACCTA+GGG | + | chr3_1:90802071-90802090 | None:intergenic | 45.0% | |
AAACACATCCTCCACTACCT+AGG | + | chr3_1:90802072-90802091 | None:intergenic | 45.0% | |
AAGGACCCGATGAGGATATA+TGG | + | chr3_1:90802132-90802151 | None:intergenic | 45.0% | |
!!! | TATAAATTTTTCATTAAAAA+AGG | + | chr3_1:90793014-90793033 | None:intergenic | 5.0% |
!!! | TTTTAATGAAAAATTTATAT+TGG | - | chr3_1:90793015-90793034 | Msa0386960:intron | 5.0% |
!! | TTTAATGAAAAATTTATATT+GGG | - | chr3_1:90793016-90793035 | Msa0386960:intron | 5.0% |
!!! | TTATTGATTTTTTTTATAAT+TGG | - | chr3_1:90798263-90798282 | Msa0386960:intron | 5.0% |
!!! | TATTGATTTTTTTTATAATT+GGG | - | chr3_1:90798264-90798283 | Msa0386960:intron | 5.0% |
!!! | TAGTTTATTTTATTTATAAT+TGG | - | chr3_1:90798294-90798313 | Msa0386960:intron | 5.0% |
!!! | AGTTTATTTTATTTATAATT+GGG | - | chr3_1:90798295-90798314 | Msa0386960:intron | 5.0% |
!!! | AAAAAAAAAATTATAGTTTT+TGG | - | chr3_1:90798547-90798566 | Msa0386960:intron | 5.0% |
!!! | TAAAAAAAAATTATAGTTTT+TGG | + | chr3_1:90798760-90798779 | None:intergenic | 5.0% |
!! | TATAAATTGTAAAAAATAAA+AGG | - | chr3_1:90800031-90800050 | Msa0386960:intron | 5.0% |
!!! | TGGGGCTTTTGGTTTAGCCA+TGG | + | chr3_1:90792417-90792436 | None:intergenic | 50.0% |
!!! | AGGTTTCGCTTTGGGGCTTT+TGG | + | chr3_1:90792428-90792447 | None:intergenic | 50.0% |
GAGGGTTTGGATGGATCAGA+TGG | + | chr3_1:90792601-90792620 | None:intergenic | 50.0% | |
TCCATCCAAACCCTCTTACG+TGG | - | chr3_1:90792606-90792625 | Msa0386960:intron | 50.0% | |
CTTTGCCACGTAAGAGGGTT+TGG | + | chr3_1:90792614-90792633 | None:intergenic | 50.0% | |
GAATGAAACCTGTTCCTGCC+TGG | - | chr3_1:90793329-90793348 | Msa0386960:CDS | 50.0% | |
CCCCTTTGCATTGGAGAAGA+AGG | + | chr3_1:90793396-90793415 | None:intergenic | 50.0% | |
CTTCGATGTCAAAGTGAGGC+AGG | - | chr3_1:90793422-90793441 | Msa0386960:intron | 50.0% | |
AGTGAGGCAGGGTGAAGAAT+AGG | - | chr3_1:90793434-90793453 | Msa0386960:intron | 50.0% | |
GTGAGGCAGGGTGAAGAATA+GGG | - | chr3_1:90793435-90793454 | Msa0386960:intron | 50.0% | |
AGGGTGAAGAATAGGGCTTG+AGG | - | chr3_1:90793442-90793461 | Msa0386960:intron | 50.0% | |
GGGTGAAGAATAGGGCTTGA+GGG | - | chr3_1:90793443-90793462 | Msa0386960:intron | 50.0% | |
AGGGCTTGAGGGATTAAACC+TGG | - | chr3_1:90793454-90793473 | Msa0386960:intron | 50.0% | |
GGGCTTGAGGGATTAAACCT+GGG | - | chr3_1:90793455-90793474 | Msa0386960:intron | 50.0% | |
GGCTTGAGGGATTAAACCTG+GGG | - | chr3_1:90793456-90793475 | Msa0386960:intron | 50.0% | |
TAAACCTGGGGTTATCCCCT+TGG | - | chr3_1:90793468-90793487 | Msa0386960:intron | 50.0% | |
TAATCCAAGGGGATAACCCC+AGG | + | chr3_1:90793475-90793494 | None:intergenic | 50.0% | |
TTTACAGCGGAGCTGAACTG+AGG | + | chr3_1:90793543-90793562 | None:intergenic | 50.0% | |
GCTCCGCTGTAAACCTGATT+TGG | - | chr3_1:90793550-90793569 | Msa0386960:intron | 50.0% | |
!! | AGAGTGCTGCGCTTCAACAA+TGG | - | chr3_1:90793582-90793601 | Msa0386960:intron | 50.0% |
TTTACGGGACCTCGGAGTTA+AGG | + | chr3_1:90794637-90794656 | None:intergenic | 50.0% | |
GTTTCGGTACCTGTTCGATG+AGG | - | chr3_1:90795090-90795109 | Msa0386960:CDS | 50.0% | |
CTTCTCCTTAGGCATAGCCA+TGG | - | chr3_1:90795893-90795912 | Msa0386960:intron | 50.0% | |
AACATCGCTTCTACCTTCGG+CGG | + | chr3_1:90796067-90796086 | None:intergenic | 50.0% | |
! | AGTTTGTTCAGCTCCTACCC+AGG | + | chr3_1:90796146-90796165 | None:intergenic | 50.0% |
ATCCCTGTTTCCCTTGGAAG+TGG | - | chr3_1:90796261-90796280 | Msa0386960:intron | 50.0% | |
CTCCACTTCCAAGGGAAACA+GGG | + | chr3_1:90796266-90796285 | None:intergenic | 50.0% | |
GTATGAACAAGGACCCGATG+GGG | + | chr3_1:90796343-90796362 | None:intergenic | 50.0% | |
GAGTATGAACAAGGACCCGA+TGG | + | chr3_1:90796345-90796364 | None:intergenic | 50.0% | |
TTCGAGGGTCACTAGAACTG+GGG | + | chr3_1:90796732-90796751 | None:intergenic | 50.0% | |
!!! | GTCGGGATATTTTGGCCAAC+GGG | + | chr3_1:90796767-90796786 | None:intergenic | 50.0% |
! | CTCCATAGTTGAGTTGCAGG+AGG | - | chr3_1:90797056-90797075 | Msa0386960:intron | 50.0% |
GCAGGGACCAAAACCAAAAC+TGG | + | chr3_1:90798376-90798395 | None:intergenic | 50.0% | |
GCAGGGACCAAAACCAAAAC+TGG | + | chr3_1:90798376-90798395 | None:intergenic | 50.0% | |
CCAGGGACGAAAACCAAAAC+TGG | + | chr3_1:90798467-90798486 | None:intergenic | 50.0% | |
!!! | CCAGTTTTGGTTTTCGTCCC+TGG | - | chr3_1:90798464-90798483 | Msa0386960:intron | 50.0% |
! | CTTTTGTGCATATTGGGGCC+AGG | + | chr3_1:90798606-90798625 | None:intergenic | 50.0% |
TTCGTGTCCGTTGGTACTAC+TGG | - | chr3_1:90799241-90799260 | Msa0386960:intron | 50.0% | |
GCGTCATTTCCATGGCTCAA+AGG | - | chr3_1:90799287-90799306 | Msa0386960:intron | 50.0% | |
AATCAGTGCAGCGATCACAC+TGG | + | chr3_1:90799692-90799711 | None:intergenic | 50.0% | |
! | AGTGTGATCGCTGCACTGAT+TGG | - | chr3_1:90799691-90799710 | Msa0386960:intron | 50.0% |
CGGGTGCGAAAGACATATCA+TGG | + | chr3_1:90800143-90800162 | None:intergenic | 50.0% | |
ATATGTCTTTCGCACCCGTC+TGG | - | chr3_1:90800145-90800164 | Msa0386960:intron | 50.0% | |
!! | CTTCCTTAGCTCTAAGGTCC+TGG | - | chr3_1:90800267-90800286 | Msa0386960:intron | 50.0% |
GGATAAGTGCTCTTCGGATG+TGG | + | chr3_1:90800757-90800776 | None:intergenic | 50.0% | |
TGGGCAGCTGTTTGATCCTT+AGG | + | chr3_1:90800778-90800797 | None:intergenic | 50.0% | |
TATCAAAGATCTCGGAGGCC+AGG | + | chr3_1:90801174-90801193 | None:intergenic | 50.0% | |
!! | CAACACAACGAAGGTGTTGG+AGG | + | chr3_1:90801314-90801333 | None:intergenic | 50.0% |
CTCCAACACCTTCGTTGTGT+TGG | - | chr3_1:90801312-90801331 | Msa0386960:intron | 50.0% | |
! | ACCCAACACAACGAAGGTGT+TGG | + | chr3_1:90801317-90801336 | None:intergenic | 50.0% |
CTTCACACCCAACACAACGA+AGG | + | chr3_1:90801323-90801342 | None:intergenic | 50.0% | |
TCGTTGTGTTGGGTGTGAAG+AGG | - | chr3_1:90801323-90801342 | Msa0386960:intron | 50.0% | |
TCCCACTTTGCCTGGACATA+TGG | - | chr3_1:90801355-90801374 | Msa0386960:intron | 50.0% | |
GCCATATGTCCAGGCAAAGT+GGG | + | chr3_1:90801359-90801378 | None:intergenic | 50.0% | |
TGCCATATGTCCAGGCAAAG+TGG | + | chr3_1:90801360-90801379 | None:intergenic | 50.0% | |
CTTAATTAGGCAGCTAGGGG+AGG | + | chr3_1:90801589-90801608 | None:intergenic | 50.0% | |
CTCCCCTAGCTGCCTAATTA+AGG | - | chr3_1:90801587-90801606 | Msa0386960:intron | 50.0% | |
GGGATGCATAGCTGCAATGA+AGG | + | chr3_1:90801624-90801643 | None:intergenic | 50.0% | |
! | ACTGTTTCCCTAGGTAGTGG+AGG | - | chr3_1:90802061-90802080 | Msa0386960:five_prime_UTR | 50.0% |
GTATGAACAAGGACCCGATG+AGG | + | chr3_1:90796343-90796362 | None:intergenic | 50.0% | |
CAACTGCCAACACGATTCAC+TGG | + | chr3_1:90802233-90802252 | None:intergenic | 50.0% | |
! | CAGTGAATCGTGTTGGCAGT+TGG | - | chr3_1:90802231-90802250 | Msa0386960:five_prime_UTR | 50.0% |
GCCACGTAAGAGGGTTTGGA+TGG | + | chr3_1:90792610-90792629 | None:intergenic | 55.0% | |
! | GGGATCGAAGCTGATTCACG+AGG | - | chr3_1:90792640-90792659 | Msa0386960:intron | 55.0% |
GCGGAGCTGAACTGAGGATA+AGG | + | chr3_1:90793537-90793556 | None:intergenic | 55.0% | |
GGCTGCAGTGACTGGTAAGT+TGG | - | chr3_1:90793716-90793735 | Msa0386960:intron | 55.0% | |
AGAGTAGGTTTGGGGAGCAG+GGG | + | chr3_1:90794106-90794125 | None:intergenic | 55.0% | |
GAGAGTAGGTTTGGGGAGCA+GGG | + | chr3_1:90794107-90794126 | None:intergenic | 55.0% | |
! | GTGCTACTAGAGTTGCCACC+AGG | + | chr3_1:90794850-90794869 | None:intergenic | 55.0% |
TGGATACTAAACGCCGCCGA+AGG | - | chr3_1:90796051-90796070 | Msa0386960:intron | 55.0% | |
CCTCCACTTCCAAGGGAAAC+AGG | + | chr3_1:90796267-90796286 | None:intergenic | 55.0% | |
CCTGTTTCCCTTGGAAGTGG+AGG | - | chr3_1:90796264-90796283 | Msa0386960:intron | 55.0% | |
GGGTCACTAGAACTGGGGAT+GGG | + | chr3_1:90796727-90796746 | None:intergenic | 55.0% | |
AGGGTCACTAGAACTGGGGA+TGG | + | chr3_1:90796728-90796747 | None:intergenic | 55.0% | |
GCATGCGTTCCTCTAAACCG+TGG | - | chr3_1:90799166-90799185 | Msa0386960:intron | 55.0% | |
CAAGAGACGTTCGTGTCCGT+TGG | - | chr3_1:90799232-90799251 | Msa0386960:intron | 55.0% | |
TGTCCGTTGGTACTACTGGC+CGG | - | chr3_1:90799245-90799264 | Msa0386960:intron | 55.0% | |
TGGCCGGAGGAGACAAAGAA+GGG | - | chr3_1:90799261-90799280 | Msa0386960:intron | 55.0% | |
CGACCCTTCTTTGTCTCCTC+CGG | + | chr3_1:90799267-90799286 | None:intergenic | 55.0% | |
CGGAGGAGACAAAGAAGGGT+CGG | - | chr3_1:90799265-90799284 | Msa0386960:intron | 55.0% | |
AAGGGTCGGCGTCATTTCCA+TGG | - | chr3_1:90799279-90799298 | Msa0386960:intron | 55.0% | |
!! | AGGAGTGAGAGCACCAGTAG+CGG | + | chr3_1:90799451-90799470 | None:intergenic | 55.0% |
CTCCCAGGACCTTAGAGCTA+AGG | + | chr3_1:90800273-90800292 | None:intergenic | 55.0% | |
!! | CTTAGCTCTAAGGTCCTGGG+AGG | - | chr3_1:90800271-90800290 | Msa0386960:intron | 55.0% |
GGGTGAGTAGTGACGATGAG+TGG | + | chr3_1:90800679-90800698 | None:intergenic | 55.0% | |
CTTCGGATGTGGCTCAGGTT+TGG | + | chr3_1:90800746-90800765 | None:intergenic | 55.0% | |
ATGCTGCAGTTAGGCGGCTA+GGG | + | chr3_1:90801271-90801290 | None:intergenic | 55.0% | |
ACAACCCGGATGCTGCAGTT+AGG | + | chr3_1:90801280-90801299 | None:intergenic | 55.0% | |
TACCGGCCGGAGGAGTCAAT+TGG | - | chr3_1:90792694-90792713 | Msa0386960:intron | 60.0% | |
! | CACCAATTGACTCCTCCGGC+CGG | + | chr3_1:90792699-90792718 | None:intergenic | 60.0% |
! | CGGCCACCAATTGACTCCTC+CGG | + | chr3_1:90792703-90792722 | None:intergenic | 60.0% |
! | CGGAGGAGTCAATTGGTGGC+CGG | - | chr3_1:90792701-90792720 | Msa0386960:intron | 60.0% |
GGTGGCCGGAGACAGTTTCA+CGG | - | chr3_1:90792715-90792734 | Msa0386960:intron | 60.0% | |
CTCTGTATTCCGAGGCAGCC+AGG | + | chr3_1:90793350-90793369 | None:intergenic | 60.0% | |
AGTGTGAGGGCTGCAGTGAC+TGG | - | chr3_1:90793708-90793727 | Msa0386960:intron | 60.0% | |
GACAGAAGCAGCGAGCCAGA+AGG | + | chr3_1:90794054-90794073 | None:intergenic | 60.0% | |
GGAGAGTAGGTTTGGGGAGC+AGG | + | chr3_1:90794108-90794127 | None:intergenic | 60.0% | |
CCTCCGGCCAGTAGTACCAA+CGG | + | chr3_1:90799251-90799270 | None:intergenic | 60.0% | |
CTGGCCGGAGGAGACAAAGA+AGG | - | chr3_1:90799260-90799279 | Msa0386960:intron | 60.0% | |
GTGCTCTTCGGATGTGGCTC+AGG | + | chr3_1:90800751-90800770 | None:intergenic | 60.0% | |
TGCTGCAGTTAGGCGGCTAG+GGG | + | chr3_1:90801270-90801289 | None:intergenic | 60.0% | |
GATGCTGCAGTTAGGCGGCT+AGG | + | chr3_1:90801272-90801291 | None:intergenic | 60.0% | |
AGCCGCCTAACTGCAGCATC+CGG | - | chr3_1:90801272-90801291 | Msa0386960:intron | 60.0% | |
ACCCGGATGCTGCAGTTAGG+CGG | + | chr3_1:90801277-90801296 | None:intergenic | 60.0% | |
CGTCCGGTGGTATTACCGGC+CGG | - | chr3_1:90792681-90792700 | Msa0386960:intron | 65.0% | |
CCTCCGGCCGGTAATACCAC+CGG | + | chr3_1:90792687-90792706 | None:intergenic | 65.0% | |
CGGCCGGAGGAGTCAATTGG+TGG | - | chr3_1:90792697-90792716 | Msa0386960:intron | 65.0% | |
CTGTTCCTGCCTGGCTGCCT+CGG | - | chr3_1:90793338-90793357 | Msa0386960:CDS | 65.0% | |
GTATTCCGAGGCAGCCAGGC+AGG | + | chr3_1:90793346-90793365 | None:intergenic | 65.0% | |
CCGTTGGTACTACTGGCCGG+AGG | - | chr3_1:90799248-90799267 | Msa0386960:intron | 65.0% | |
GCCGCCTAACTGCAGCATCC+GGG | - | chr3_1:90801273-90801292 | Msa0386960:intron | 65.0% | |
GCTAGGGGAGGTCGCAAGGA+TGG | + | chr3_1:90801577-90801596 | None:intergenic | 65.0% | |
CCGGTGGTATTACCGGCCGG+AGG | - | chr3_1:90792684-90792703 | Msa0386960:intron | 70.0% | |
CGAGGCAGCCAGGCAGGAAC+AGG | + | chr3_1:90793340-90793359 | None:intergenic | 70.0% | |
GGCAGCTAGGGGAGGTCGCA+AGG | + | chr3_1:90801581-90801600 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 90792125 | 90802254 | 90792125 | ID=Msa0386960;Name=Msa0386960 |
chr3_1 | mRNA | 90792125 | 90802254 | 90792125 | ID=Msa0386960-mRNA-1;Parent=Msa0386960;Name=Msa0386960-mRNA-1;_AED=0.19;_eAED=0.20;_QI=291|0.44|0.4|1|0.44|0.5|10|312|378 |
chr3_1 | exon | 90792125 | 90792463 | 90792125 | ID=Msa0386960-mRNA-1:exon:25215;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90793285 | 90793420 | 90793285 | ID=Msa0386960-mRNA-1:exon:25214;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90794895 | 90795037 | 90794895 | ID=Msa0386960-mRNA-1:exon:25213;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90795044 | 90795228 | 90795044 | ID=Msa0386960-mRNA-1:exon:25212;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90798031 | 90798052 | 90798031 | ID=Msa0386960-mRNA-1:exon:25211;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90799033 | 90799168 | 90799033 | ID=Msa0386960-mRNA-1:exon:25210;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90800650 | 90800718 | 90800650 | ID=Msa0386960-mRNA-1:exon:25209;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90801459 | 90801601 | 90801459 | ID=Msa0386960-mRNA-1:exon:25208;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90801608 | 90801804 | 90801608 | ID=Msa0386960-mRNA-1:exon:25207;Parent=Msa0386960-mRNA-1 |
chr3_1 | exon | 90801885 | 90802254 | 90801885 | ID=Msa0386960-mRNA-1:exon:25206;Parent=Msa0386960-mRNA-1 |
chr3_1 | five_prime_UTR | 90801964 | 90802254 | 90801964 | ID=Msa0386960-mRNA-1:five_prime_utr;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90801885 | 90801963 | 90801885 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90801608 | 90801804 | 90801608 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90801459 | 90801601 | 90801459 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90800650 | 90800718 | 90800650 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90799033 | 90799168 | 90799033 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90798031 | 90798052 | 90798031 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90795044 | 90795228 | 90795044 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90794895 | 90795037 | 90794895 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90793285 | 90793420 | 90793285 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | CDS | 90792437 | 90792463 | 90792437 | ID=Msa0386960-mRNA-1:cds;Parent=Msa0386960-mRNA-1 |
chr3_1 | three_prime_UTR | 90792125 | 90792436 | 90792125 | ID=Msa0386960-mRNA-1:three_prime_utr;Parent=Msa0386960-mRNA-1 |
Gene Sequence |
Protein sequence |