Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0387210 | XP_003601756.2 | 97.156 | 844 | 24 | 0 | 1 | 844 | 113 | 956 | 0.0 | 1712 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0387210 | sp|Q9FYG2|CMTA4_ARATH | 47.130 | 906 | 385 | 23 | 1 | 843 | 142 | 1016 | 0.0 | 671 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0387210 | G7JBF2 | 97.156 | 844 | 24 | 0 | 1 | 844 | 113 | 956 | 0.0 | 1712 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0163380 | Msa0387210 | 0.805595 | 1.237247e-49 | -8.615850e-47 |
Msa0387210 | Msa0429260 | 0.805673 | 1.191426e-49 | -8.615850e-47 |
Msa0387210 | Msa0468120 | 0.937678 | 2.342534e-98 | -8.615850e-47 |
Msa0387210 | Msa0943760 | 0.800632 | 1.315941e-48 | -8.615850e-47 |
Msa0387210 | Msa0982280 | 0.982256 | 1.263115e-154 | -8.615850e-47 |
Msa0387210 | Msa1307750 | 0.984190 | 7.605901e-160 | -8.615850e-47 |
Msa0387210 | Msa1411610 | 0.814142 | 1.790709e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0387210 | MtrunA17_Chr3g0122351 | 97.156 | 844 | 24 | 0 | 1 | 844 | 113 | 956 | 0.0 | 1712 |
Msa0387210 | MtrunA17_Chr8g0377501 | 58.238 | 874 | 293 | 12 | 1 | 830 | 120 | 965 | 0.0 | 931 |
Msa0387210 | MtrunA17_Chr2g0279141 | 39.016 | 610 | 313 | 13 | 263 | 830 | 439 | 1031 | 1.76e-125 | 402 |
Msa0387210 | MtrunA17_Chr8g0382191 | 39.383 | 551 | 298 | 8 | 274 | 799 | 501 | 1040 | 1.16e-115 | 377 |
Msa0387210 | MtrunA17_Chr4g0050401 | 37.564 | 583 | 294 | 14 | 263 | 799 | 426 | 984 | 3.84e-111 | 364 |
Msa0387210 | MtrunA17_Chr4g0068161 | 33.997 | 603 | 333 | 18 | 256 | 823 | 347 | 919 | 1.81e-84 | 289 |
Msa0387210 | MtrunA17_Chr2g0294711 | 33.157 | 567 | 326 | 14 | 263 | 796 | 340 | 886 | 3.09e-79 | 275 |
Msa0387210 | MtrunA17_Chr8g0382181 | 45.652 | 92 | 47 | 1 | 276 | 364 | 377 | 468 | 8.91e-20 | 93.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0387210 | AT1G67310.1 | 47.130 | 906 | 385 | 23 | 1 | 843 | 142 | 1016 | 0.0 | 671 |
Msa0387210 | AT5G09410.4 | 37.198 | 621 | 321 | 15 | 267 | 839 | 281 | 880 | 6.62e-116 | 374 |
Msa0387210 | AT5G09410.1 | 37.258 | 620 | 322 | 15 | 267 | 839 | 384 | 983 | 8.92e-115 | 373 |
Msa0387210 | AT5G09410.2 | 37.258 | 620 | 322 | 15 | 267 | 839 | 402 | 1001 | 1.03e-114 | 374 |
Msa0387210 | AT5G09410.3 | 37.258 | 620 | 322 | 15 | 267 | 839 | 461 | 1060 | 3.38e-114 | 374 |
Msa0387210 | AT5G64220.1 | 39.216 | 561 | 299 | 14 | 267 | 797 | 451 | 999 | 5.95e-114 | 372 |
Msa0387210 | AT5G64220.2 | 39.216 | 561 | 299 | 14 | 267 | 797 | 451 | 999 | 5.95e-114 | 372 |
Msa0387210 | AT2G22300.3 | 38.214 | 560 | 296 | 12 | 263 | 799 | 391 | 923 | 1.41e-110 | 362 |
Msa0387210 | AT2G22300.2 | 38.214 | 560 | 296 | 12 | 263 | 799 | 449 | 981 | 6.44e-110 | 361 |
Msa0387210 | AT2G22300.1 | 38.214 | 560 | 296 | 12 | 263 | 799 | 449 | 981 | 6.44e-110 | 361 |
Msa0387210 | AT3G16940.3 | 33.046 | 581 | 335 | 14 | 261 | 812 | 262 | 817 | 1.75e-77 | 268 |
Msa0387210 | AT3G16940.1 | 33.046 | 581 | 335 | 14 | 261 | 812 | 289 | 844 | 4.38e-77 | 268 |
Msa0387210 | AT3G16940.2 | 31.224 | 474 | 276 | 11 | 261 | 707 | 289 | 739 | 4.92e-53 | 197 |
Find 232 sgRNAs with CRISPR-Local
Find 685 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAATTGTAAATTTCTGTTTC+TGG | 0.128293 | 3_1:+91117081 | None:intergenic |
TGGTTTATTTGTCTCTATTT+TGG | 0.171739 | 3_1:-91113474 | Msa0387210:three_prime_UTR |
CATCCCGAGGTTCTTGAATT+TGG | 0.192741 | 3_1:+91117126 | None:intergenic |
TATAATCCCTTGCTCTTTCT+TGG | 0.193263 | 3_1:+91115777 | None:intergenic |
GATATGTAGAACAAACTTTA+AGG | 0.194446 | 3_1:-91113413 | Msa0387210:three_prime_UTR |
GGGATTATACACATAGTTTC+TGG | 0.215272 | 3_1:-91115763 | Msa0387210:CDS |
AATTTCATGCTCATTATAAA+AGG | 0.224864 | 3_1:+91121615 | None:intergenic |
TGAGTTTCTATTGAAGAATA+TGG | 0.231372 | 3_1:+91117191 | None:intergenic |
GCCTCCACCACTTGTCTAAA+TGG | 0.241617 | 3_1:-91114650 | Msa0387210:CDS |
TCATTGGCATAACAATATTC+TGG | 0.250713 | 3_1:+91117047 | None:intergenic |
AATGGATATGTCACCGGTTT+AGG | 0.257839 | 3_1:-91114632 | Msa0387210:CDS |
TTGCATTCACTGTAATGTTT+TGG | 0.270778 | 3_1:-91116094 | Msa0387210:CDS |
CAGTCCCTTGTGCCCATTGC+TGG | 0.272292 | 3_1:+91114934 | None:intergenic |
GAAACGCCTCTATCTTCTTT+TGG | 0.274448 | 3_1:-91117420 | Msa0387210:CDS |
TTGAAGAATATGGAGAAAAT+TGG | 0.278554 | 3_1:+91117201 | None:intergenic |
TTCTCATCATTATTGCTGTT+GGG | 0.280715 | 3_1:+91117354 | None:intergenic |
GTTTCCAGAGGCGAAGTTAT+TGG | 0.289983 | 3_1:-91122936 | Msa0387210:five_prime_UTR |
CAACCATATGATGGATATAA+TGG | 0.292630 | 3_1:-91121559 | Msa0387210:CDS |
TCTACCTGGGCTTGTATGTT+TGG | 0.292828 | 3_1:-91116273 | Msa0387210:CDS |
GTGCATTACTTCAGGAAATA+AGG | 0.299775 | 3_1:-91116166 | Msa0387210:CDS |
CCATTTGGATCTTGTGAACT+TGG | 0.310113 | 3_1:+91114980 | None:intergenic |
GGGAAGCGCTCTAGCCTTCA+TGG | 0.317559 | 3_1:-91113494 | Msa0387210:exon |
GAGGCTCCGTCCCATCTTCT+TGG | 0.324091 | 3_1:-91116201 | Msa0387210:CDS |
TCAAGCTCAGAAGAATCTTT+AGG | 0.325777 | 3_1:+91114842 | None:intergenic |
GGCAATACAAGCTAATGATA+TGG | 0.326426 | 3_1:-91114242 | Msa0387210:CDS |
ACTTCATCGAATGTACAAAA+TGG | 0.326522 | 3_1:-91113333 | Msa0387210:three_prime_UTR |
CTAGGAGAGCATCTATAATA+TGG | 0.330922 | 3_1:+91115923 | None:intergenic |
TGCATCTTCATCTCGTTCAT+TGG | 0.331556 | 3_1:+91115813 | None:intergenic |
AGTTCCTGCTGAAATAATTC+AGG | 0.333245 | 3_1:-91116241 | Msa0387210:CDS |
ATAACAGTTCTTCTGGACTA+TGG | 0.334037 | 3_1:+91116058 | None:intergenic |
CACAACTGAGAATGGGGTTC+AGG | 0.337492 | 3_1:+91115722 | None:intergenic |
GCATCTATTGCGGCCAGCAA+TGG | 0.343835 | 3_1:-91114947 | Msa0387210:CDS |
CTTCATTGGGCTGCACGGTT+TGG | 0.345093 | 3_1:-91115658 | Msa0387210:CDS |
ACAAGTAATAACAGTTCTTC+TGG | 0.345367 | 3_1:+91116051 | None:intergenic |
CCTCTCTGCTTCGATTATAA+AGG | 0.347695 | 3_1:-91116010 | Msa0387210:CDS |
AACTTAATTGTTCCTCCAAT+TGG | 0.352792 | 3_1:+91121668 | None:intergenic |
GCCTCCCCTCGGATTCTACC+TGG | 0.353045 | 3_1:-91116287 | Msa0387210:CDS |
GTTGGGGTGTATCCGGTAAC+TGG | 0.354213 | 3_1:+91117371 | None:intergenic |
CGCACAAGCTCTGCGCCAAT+TGG | 0.355249 | 3_1:-91121683 | Msa0387210:CDS |
TCCTTGTATGCGTGTTGTTT+TGG | 0.357909 | 3_1:+91117846 | None:intergenic |
TATGGTTGTTTATGATCATC+TGG | 0.363053 | 3_1:+91121574 | None:intergenic |
TTCACATGAATCACCAACTA+TGG | 0.363538 | 3_1:+91121798 | None:intergenic |
CATCTATTGCGGCCAGCAAT+GGG | 0.366299 | 3_1:-91114946 | Msa0387210:CDS |
GTTCTCATCATTATTGCTGT+TGG | 0.366506 | 3_1:+91117353 | None:intergenic |
CTCCAGTCCTGGGTTCTTAG+AGG | 0.368654 | 3_1:-91121761 | Msa0387210:CDS |
ATTGCTGCTGGTGCATCTGC+TGG | 0.368996 | 3_1:-91115016 | Msa0387210:CDS |
CTCTATCCAACATGCATTCA+AGG | 0.374996 | 3_1:+91113310 | None:intergenic |
GATATGGGCAGTTGGAATCT+TGG | 0.378012 | 3_1:-91114226 | Msa0387210:CDS |
GTGGCATTGGTGGATATGTT+AGG | 0.378824 | 3_1:-91114610 | Msa0387210:CDS |
ATGATTTATATCAATTTCCT+TGG | 0.379049 | 3_1:-91113515 | Msa0387210:CDS |
ATGGATGTTGTCTCAGGGTT+TGG | 0.382049 | 3_1:+91121817 | None:intergenic |
GTATCCGGTAACTGGTTTCC+TGG | 0.383094 | 3_1:+91117379 | None:intergenic |
CTTGACCATGATTGCCCTGC+TGG | 0.384698 | 3_1:-91117936 | Msa0387210:CDS |
GTTGCTCTGTGCATTACTTC+AGG | 0.384723 | 3_1:-91116174 | Msa0387210:CDS |
GTTCCATTATATCCATCATA+TGG | 0.384932 | 3_1:+91121556 | None:intergenic |
ATGGATGGACTGCCCTTCAT+TGG | 0.385897 | 3_1:-91115672 | Msa0387210:CDS |
CCAACTATGGATGTTGTCTC+AGG | 0.386456 | 3_1:+91121811 | None:intergenic |
CTTGTTTGCAAATGAGGACT+TGG | 0.388891 | 3_1:+91117872 | None:intergenic |
TGCTAAGGTGGCGGAGAAAA+CGG | 0.391461 | 3_1:-91114194 | Msa0387210:CDS |
GAGGTTCTTGAATTTGGCTT+TGG | 0.394026 | 3_1:+91117132 | None:intergenic |
CATGTGTAGGTGATCATTGT+TGG | 0.398565 | 3_1:-91116321 | Msa0387210:intron |
TCCACCAATGCCACCTAAAC+CGG | 0.398700 | 3_1:+91114619 | None:intergenic |
GTTAATTTCCGTGATATCAA+TGG | 0.399308 | 3_1:-91115691 | Msa0387210:CDS |
GCTTGTATTGCCTCCGAGTC+TGG | 0.406666 | 3_1:+91114253 | None:intergenic |
TGGTAACTTGTTTGCAAATG+AGG | 0.409912 | 3_1:+91117866 | None:intergenic |
ATACACATAGTTTCTGGATT+GGG | 0.416266 | 3_1:-91115757 | Msa0387210:CDS |
GTGAACCTTTGTTGCCTCAT+TGG | 0.418858 | 3_1:+91117031 | None:intergenic |
AGAAAGCAGATGATGATTCA+TGG | 0.418980 | 3_1:-91115948 | Msa0387210:CDS |
GATGGATATAATGGAACAAA+AGG | 0.419267 | 3_1:-91121550 | Msa0387210:intron |
AATCAGAATTTCTCCAGTCC+TGG | 0.422608 | 3_1:-91121772 | Msa0387210:CDS |
AAGGATGATAGCTCAGAATC+TGG | 0.430655 | 3_1:-91115991 | Msa0387210:CDS |
TATTGCTGTTGGGGTGTATC+CGG | 0.432086 | 3_1:+91117364 | None:intergenic |
TTACAGGGGACATCCAATTC+TGG | 0.432848 | 3_1:-91121892 | Msa0387210:intron |
CAGCATCTCTGTCCAAGATA+AGG | 0.435726 | 3_1:+91117902 | None:intergenic |
TGGATGGACTGCCCTTCATT+GGG | 0.436126 | 3_1:-91115671 | Msa0387210:CDS |
GGACTGGAGAAATTCTGATT+AGG | 0.437165 | 3_1:+91121775 | None:intergenic |
TGGCAACACGAGTGATGAAA+TGG | 0.437603 | 3_1:-91113604 | Msa0387210:CDS |
TGCAGCAATTCAAAAGGCTT+TGG | 0.437608 | 3_1:-91114079 | Msa0387210:CDS |
CTGCCCTTCATTGGGCTGCA+CGG | 0.438440 | 3_1:-91115663 | Msa0387210:CDS |
CTTATCTTGGACAGAGATGC+TGG | 0.440239 | 3_1:-91117901 | Msa0387210:CDS |
CATTGGCATAACAATATTCT+GGG | 0.440294 | 3_1:+91117048 | None:intergenic |
CAGCAATGGGCACAAGGGAC+TGG | 0.440405 | 3_1:-91114933 | Msa0387210:CDS |
GTTGCTTCACTTATTGCTGC+TGG | 0.440412 | 3_1:-91115028 | Msa0387210:CDS |
ATTACAGTGAATGCAACTAT+TGG | 0.441063 | 3_1:+91116101 | None:intergenic |
ATTCATGCCACAACTGAGAA+TGG | 0.444168 | 3_1:+91115714 | None:intergenic |
TCAGGCAGCTGCACGTATAC+AGG | 0.444713 | 3_1:-91114720 | Msa0387210:CDS |
CATCAGTATAATCGCATGCT+TGG | 0.446008 | 3_1:-91114018 | Msa0387210:CDS |
ATATTTCTTCTGAATTGATA+AGG | 0.446959 | 3_1:+91114562 | None:intergenic |
ATGAATTTACGTTGCCAACT+AGG | 0.447557 | 3_1:+91115905 | None:intergenic |
TTCATGCCACAACTGAGAAT+GGG | 0.447886 | 3_1:+91115715 | None:intergenic |
TCTGGTTCAGCGAATGCAAC+AGG | 0.449281 | 3_1:+91121592 | None:intergenic |
ATTATTCTGCATGATTAGGT+TGG | 0.452463 | 3_1:-91123009 | None:intergenic |
CCAACCAGGAAACCAGTTAC+CGG | 0.462646 | 3_1:-91117383 | Msa0387210:CDS |
CAACTTCTGTGGATGATGCT+TGG | 0.463627 | 3_1:-91113569 | Msa0387210:CDS |
TATACACATAGTTTCTGGAT+TGG | 0.464836 | 3_1:-91115758 | Msa0387210:CDS |
GTTTGGGCAGGCTCATGTGA+GGG | 0.465902 | 3_1:-91114280 | Msa0387210:intron |
CAAACCGTGCAGCCCAATGA+AGG | 0.466086 | 3_1:+91115659 | None:intergenic |
TTCAGAAGAAATATAGAGGC+TGG | 0.466525 | 3_1:-91114553 | Msa0387210:CDS |
AAGAGAAATGATTGCCAACC+AGG | 0.467341 | 3_1:-91117397 | Msa0387210:CDS |
GAGCTACGACTCTGACTAAA+CGG | 0.468229 | 3_1:+91121850 | None:intergenic |
GTGCACATTCTTTCAGAAAA+CGG | 0.468978 | 3_1:-91114688 | Msa0387210:CDS |
ATCCTTTCTCTGCCTCCCCT+CGG | 0.469219 | 3_1:-91116298 | Msa0387210:CDS |
TGCTGTCAGAAATGCAGCTC+AGG | 0.471697 | 3_1:-91114738 | Msa0387210:CDS |
TCTCTTCCAAAAGAAGATAG+AGG | 0.474103 | 3_1:+91117414 | None:intergenic |
TTCTGGATTGGGTTTCGAGT+GGG | 0.474526 | 3_1:-91115746 | Msa0387210:CDS |
GAGCAACCTTTCCAAGAAGA+TGG | 0.475271 | 3_1:+91116190 | None:intergenic |
ACAACTGAGAATGGGGTTCA+GGG | 0.477876 | 3_1:+91115723 | None:intergenic |
ATCAGTATAATCGCATGCTT+GGG | 0.478091 | 3_1:-91114017 | Msa0387210:CDS |
GCTAAGGTGGCGGAGAAAAC+GGG | 0.481096 | 3_1:-91114193 | Msa0387210:CDS |
TCTCATCATTATTGCTGTTG+GGG | 0.481799 | 3_1:+91117355 | None:intergenic |
TAGGTTGTACATAGTGATAA+AGG | 0.481908 | 3_1:-91113370 | Msa0387210:three_prime_UTR |
CTTGGAATATTGATGATGCT+TGG | 0.484389 | 3_1:-91113551 | Msa0387210:CDS |
CATGCCCAGCAGGGCAATCA+TGG | 0.486673 | 3_1:+91117931 | None:intergenic |
GTTGGCAACGTAAATTCATC+TGG | 0.487682 | 3_1:-91115901 | Msa0387210:CDS |
ATTATAGATGCTCTCCTAGT+TGG | 0.490367 | 3_1:-91115919 | Msa0387210:CDS |
GCAATACAAGCTAATGATAT+GGG | 0.490598 | 3_1:-91114241 | Msa0387210:CDS |
CCGGTAACTGGTTTCCTGGT+TGG | 0.491923 | 3_1:+91117383 | None:intergenic |
ATCCGAGGGGAGGCAGAGAA+AGG | 0.494394 | 3_1:+91116296 | None:intergenic |
TGAAGGATAAGCTGCGGCAC+TGG | 0.500111 | 3_1:-91115849 | Msa0387210:CDS |
TCAATTCAGAAGAAATATAG+AGG | 0.500680 | 3_1:-91114557 | Msa0387210:CDS |
ATTTCATGCTCATTATAAAA+GGG | 0.500746 | 3_1:+91121616 | None:intergenic |
ACATCCAATAACTTCGCCTC+TGG | 0.501649 | 3_1:+91122932 | None:intergenic |
TTGACCATGATTGCCCTGCT+GGG | 0.501670 | 3_1:-91117935 | Msa0387210:CDS |
TTGTCTGACAGGACCAGAAT+TGG | 0.501922 | 3_1:+91121879 | None:intergenic |
ACAAGCTCTGCGCCAATTGG+AGG | 0.502276 | 3_1:-91121680 | Msa0387210:CDS |
ATCAGAATTTCTCCAGTCCT+GGG | 0.502563 | 3_1:-91121771 | Msa0387210:CDS |
AACGGTGATGATTGTCTGAC+AGG | 0.503327 | 3_1:+91121868 | None:intergenic |
AACTCTTTGATTTCACTGCA+TGG | 0.505283 | 3_1:+91116141 | None:intergenic |
AACATTATACACTAAGAAAG+TGG | 0.507064 | 3_1:+91113263 | None:intergenic |
TAGTGAATCCTCATCATCAC+TGG | 0.508175 | 3_1:+91114775 | None:intergenic |
CCATCCTGAATTATTTCAGC+AGG | 0.510184 | 3_1:+91116237 | None:intergenic |
AGTACATGCAGCAATTCAAA+AGG | 0.511198 | 3_1:-91114085 | Msa0387210:CDS |
ACCGGTTTAGGTGGCATTGG+TGG | 0.512373 | 3_1:-91114620 | Msa0387210:CDS |
TCCATTTAGACAAGTGGTGG+AGG | 0.513397 | 3_1:+91114649 | None:intergenic |
TTTGGCACGGGTGATTTCCA+TGG | 0.514213 | 3_1:-91114061 | Msa0387210:CDS |
AATGGGCACAAGGGACTGGC+AGG | 0.514534 | 3_1:-91114929 | Msa0387210:CDS |
GATCATAAACAACCATATGA+TGG | 0.514783 | 3_1:-91121568 | Msa0387210:CDS |
TGATTTATATCAATTTCCTT+GGG | 0.515469 | 3_1:-91113514 | Msa0387210:CDS |
TAACAGTTCTTCTGGACTAT+GGG | 0.516224 | 3_1:+91116059 | None:intergenic |
AATTCAAAAGGCTTTGGCAC+GGG | 0.518782 | 3_1:-91114073 | Msa0387210:CDS |
GGAACAATTAAGTTTGAATG+AGG | 0.519133 | 3_1:-91121659 | Msa0387210:CDS |
AAGCTAATGATATGGGCAGT+TGG | 0.520016 | 3_1:-91114234 | Msa0387210:CDS |
GTCACCGGTTTAGGTGGCAT+TGG | 0.523450 | 3_1:-91114623 | Msa0387210:CDS |
TCCGTCCCATCTTCTTGGAA+AGG | 0.524865 | 3_1:-91116196 | Msa0387210:CDS |
CTGAACCCCATTCTCAGTTG+TGG | 0.525541 | 3_1:-91115721 | Msa0387210:CDS |
ATTGGGCTGCACGGTTTGGA+AGG | 0.532088 | 3_1:-91115654 | Msa0387210:intron |
TGTAGCTTGTAAATCAGTCT+AGG | 0.538748 | 3_1:-91113389 | Msa0387210:three_prime_UTR |
GACCTCTAAGAACCCAGGAC+TGG | 0.539550 | 3_1:+91121759 | None:intergenic |
AAGCCAAATTCAAGAACCTC+GGG | 0.541578 | 3_1:-91117129 | Msa0387210:CDS |
ACCAAAACAACACGCATACA+AGG | 0.542431 | 3_1:-91117847 | Msa0387210:CDS |
CCAAGTTCACAAGATCCAAA+TGG | 0.543852 | 3_1:-91114980 | Msa0387210:CDS |
TTTGGGCAGGCTCATGTGAG+GGG | 0.545911 | 3_1:-91114279 | Msa0387210:intron |
CCTCCCCTCGGATTCTACCT+GGG | 0.548614 | 3_1:-91116286 | Msa0387210:CDS |
TGTCTAAATGGATATGTCAC+CGG | 0.549024 | 3_1:-91114638 | Msa0387210:CDS |
AGTCATCATGAATAATGAAA+CGG | 0.549592 | 3_1:-91121725 | Msa0387210:CDS |
TGCATCTGCTGGAGCAGTGA+CGG | 0.550109 | 3_1:-91115005 | Msa0387210:CDS |
TGATGACGAGCATGCACAGA+AGG | 0.550115 | 3_1:+91114036 | None:intergenic |
GGATTCACTAAGAAATACCT+TGG | 0.550666 | 3_1:-91114762 | Msa0387210:CDS |
TGCGGCCAGCAATGGGCACA+AGG | 0.551436 | 3_1:-91114939 | Msa0387210:CDS |
TTACTTCCTCAAGACACTGG+TGG | 0.551472 | 3_1:-91117227 | Msa0387210:CDS |
TGTTTGGGCAGGCTCATGTG+AGG | 0.551502 | 3_1:-91114281 | Msa0387210:intron |
TGCATTTCTGACAGCACCCA+AGG | 0.555782 | 3_1:+91114745 | None:intergenic |
AACTTCGCCTCTGGAAACTA+CGG | 0.556762 | 3_1:+91122941 | None:intergenic |
GGATATGTCACCGGTTTAGG+TGG | 0.565101 | 3_1:-91114629 | Msa0387210:CDS |
CCTGAGACAACATCCATAGT+TGG | 0.569426 | 3_1:-91121811 | Msa0387210:CDS |
CAATTCAAAAGGCTTTGGCA+CGG | 0.569867 | 3_1:-91114074 | Msa0387210:CDS |
CTAAACTGCTACTATGCACA+TGG | 0.570887 | 3_1:-91122973 | Msa0387210:five_prime_UTR |
CAGTCCATCCATTGATATCA+CGG | 0.574632 | 3_1:+91115683 | None:intergenic |
ATGTGAGGGGTTACCAGACT+CGG | 0.574934 | 3_1:-91114266 | Msa0387210:CDS |
GCATATTCAAGCTTGACTGT+TGG | 0.580162 | 3_1:-91117104 | Msa0387210:CDS |
TTTCTGGATTGGGTTTCGAG+TGG | 0.582020 | 3_1:-91115747 | Msa0387210:CDS |
GTACATAGTGATAAAGGTGA+TGG | 0.582479 | 3_1:-91113364 | Msa0387210:three_prime_UTR |
TAGAGACAAATAAACCATGA+AGG | 0.582538 | 3_1:+91113480 | None:intergenic |
AGCAACCTTTCCAAGAAGAT+GGG | 0.582697 | 3_1:+91116191 | None:intergenic |
AGAATATTGTTATGCCAATG+AGG | 0.584614 | 3_1:-91117045 | Msa0387210:CDS |
AATGAACGAGATGAAGATGC+AGG | 0.584800 | 3_1:-91115811 | Msa0387210:CDS |
TCTTTGTCCAAGAAAGAGCA+AGG | 0.586979 | 3_1:-91115784 | Msa0387210:CDS |
TGGACAAGGTTGTGCTAAGG+TGG | 0.588436 | 3_1:-91114206 | Msa0387210:CDS |
CTTTGTCCAAGAAAGAGCAA+GGG | 0.591267 | 3_1:-91115783 | Msa0387210:CDS |
TCTTGAAGCCAGTGATGATG+AGG | 0.591725 | 3_1:-91114783 | Msa0387210:CDS |
TGGGATGCGTCGTCGAGCCG+AGG | 0.592717 | 3_1:-91113998 | Msa0387210:intron |
GGATAGAGTTTCAAAGTCAG+TGG | 0.594400 | 3_1:-91113295 | Msa0387210:three_prime_UTR |
TCTTCTTCAAGAGCTGCTGA+AGG | 0.595191 | 3_1:-91115866 | Msa0387210:CDS |
ACCTTTCCAAGAAGATGGGA+CGG | 0.596282 | 3_1:+91116195 | None:intergenic |
AAAGCCAAATTCAAGAACCT+CGG | 0.596609 | 3_1:-91117130 | Msa0387210:CDS |
AACACGGTTATCAACTTCTG+TGG | 0.597925 | 3_1:-91113580 | Msa0387210:CDS |
TTATGCCAATGAGGCAACAA+AGG | 0.601144 | 3_1:-91117036 | Msa0387210:intron |
GATTCACTAAGAAATACCTT+GGG | 0.601371 | 3_1:-91114761 | Msa0387210:CDS |
AAACCGTGCAGCCCAATGAA+GGG | 0.601471 | 3_1:+91115660 | None:intergenic |
CTACACACAAAATGAGAGGA+AGG | 0.601881 | 3_1:+91113226 | None:intergenic |
GACATATCCATTTAGACAAG+TGG | 0.602811 | 3_1:+91114643 | None:intergenic |
TCATCTGTCATCCCTCACAT+TGG | 0.603114 | 3_1:-91114879 | Msa0387210:CDS |
CAACTATGGATGTTGTCTCA+GGG | 0.603209 | 3_1:+91121812 | None:intergenic |
AAATGGCCTTGAATGCATGT+TGG | 0.609148 | 3_1:-91113316 | Msa0387210:three_prime_UTR |
ATTTCCGTGATATCAATGGA+TGG | 0.609222 | 3_1:-91115687 | Msa0387210:CDS |
CCCAGGTAGAATCCGAGGGG+AGG | 0.609248 | 3_1:+91116286 | None:intergenic |
ACAAGGTTGTGCTAAGGTGG+CGG | 0.609415 | 3_1:-91114203 | Msa0387210:CDS |
GTCACCAAACATACAAGCCC+AGG | 0.609877 | 3_1:+91116269 | None:intergenic |
TGGACTCCACCAGTGTCTTG+AGG | 0.610261 | 3_1:+91117221 | None:intergenic |
TAAAACTGCTGCATCTATTG+CGG | 0.610279 | 3_1:-91114957 | Msa0387210:CDS |
ACAAGCCCAGGTAGAATCCG+AGG | 0.613314 | 3_1:+91116281 | None:intergenic |
ATATCCATTTAGACAAGTGG+TGG | 0.614907 | 3_1:+91114646 | None:intergenic |
TCATGCTCATTATAAAAGGG+AGG | 0.614946 | 3_1:+91121619 | None:intergenic |
ACATTCTTTCAGAAAACGGA+TGG | 0.616326 | 3_1:-91114684 | Msa0387210:CDS |
ATTCTCTTACAGGCTGAACA+TGG | 0.626364 | 3_1:-91113624 | Msa0387210:intron |
TCTTGGACAAGGTTGTGCTA+AGG | 0.628079 | 3_1:-91114209 | Msa0387210:CDS |
GAAGGCTAGAGCGCTTCCCA+AGG | 0.628496 | 3_1:+91113498 | None:intergenic |
CAAGCCCAGGTAGAATCCGA+GGG | 0.628679 | 3_1:+91116282 | None:intergenic |
AGCATGCACAGAAGGGACCA+TGG | 0.630235 | 3_1:+91114044 | None:intergenic |
TATTCTTCAATAGAAACTCA+AGG | 0.630493 | 3_1:-91117188 | Msa0387210:CDS |
GGCAGTTGGAATCTTGGACA+AGG | 0.634216 | 3_1:-91114220 | Msa0387210:CDS |
TCATGCCACAACTGAGAATG+GGG | 0.637586 | 3_1:+91115716 | None:intergenic |
GCGGCCAGCAATGGGCACAA+GGG | 0.639651 | 3_1:-91114938 | Msa0387210:CDS |
GGATGGCGTAATCTGTTGTG+AGG | 0.646267 | 3_1:-91116220 | Msa0387210:CDS |
CGAGTGATGAAATGGAAACA+CGG | 0.646958 | 3_1:-91113596 | Msa0387210:CDS |
CTGCTACTATGCACATGGAG+AGG | 0.651839 | 3_1:-91122968 | Msa0387210:five_prime_UTR |
AGGAGAACCGTAGTTTCCAG+AGG | 0.651888 | 3_1:-91122948 | Msa0387210:five_prime_UTR |
AGCTGCTGAAGGATAAGCTG+CGG | 0.660445 | 3_1:-91115855 | Msa0387210:CDS |
GATGACGAGCATGCACAGAA+GGG | 0.661662 | 3_1:+91114037 | None:intergenic |
GCAACTACACACAAAATGAG+AGG | 0.661934 | 3_1:+91113222 | None:intergenic |
ATTCATGATGACTATATCCG+AGG | 0.671055 | 3_1:+91121735 | None:intergenic |
AAGCTTGAATATGCATCCCG+AGG | 0.674899 | 3_1:+91117113 | None:intergenic |
GAGGTGACCTCTAAGAACCC+AGG | 0.676062 | 3_1:+91121754 | None:intergenic |
CCTGCTGAAATAATTCAGGA+TGG | 0.681187 | 3_1:-91116237 | Msa0387210:CDS |
CCTTTATAATCGAAGCAGAG+AGG | 0.688981 | 3_1:+91116010 | None:intergenic |
GCATTACAGAGAAACAAATG+AGG | 0.696255 | 3_1:-91122544 | Msa0387210:intron |
AGGTGGCGGAGAAAACGGGT+TGG | 0.696971 | 3_1:-91114189 | Msa0387210:CDS |
TGGGTTCTTAGAGGTCACCT+CGG | 0.705452 | 3_1:-91121752 | Msa0387210:CDS |
GATGATAGCTCAGAATCTGG+AGG | 0.706195 | 3_1:-91115988 | Msa0387210:CDS |
ATTGGCATAACAATATTCTG+GGG | 0.709888 | 3_1:+91117049 | None:intergenic |
TGAGGGGTTACCAGACTCGG+AGG | 0.712583 | 3_1:-91114263 | Msa0387210:CDS |
AAGCCCAGGTAGAATCCGAG+GGG | 0.750615 | 3_1:+91116283 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCTAAAAAAACATAAAAAAA+GGG | + | chr3_1:91117035-91117054 | None:intergenic | 10.0% |
!! | ATAATAAAGTAAGAATAAAA+AGG | + | chr3_1:91119209-91119228 | None:intergenic | 10.0% |
!! | AAAGTCAATAAAATTTATCA+TGG | + | chr3_1:91113513-91113532 | None:intergenic | 15.0% |
!! | TTATAAACAAATGTCAAAAA+GGG | - | chr3_1:91115717-91115736 | Msa0387210:CDS | 15.0% |
!!! | ATCGTAACTTTTATTAATTA+GGG | + | chr3_1:91117713-91117732 | None:intergenic | 15.0% |
!! | GTTATTTAGTAAAAACTTAA+GGG | + | chr3_1:91116135-91116154 | None:intergenic | 15.0% |
!!! | TGTTATTTAGTAAAAACTTA+AGG | + | chr3_1:91116136-91116155 | None:intergenic | 15.0% |
!!! | TTCAAAGAATGTTTTATTTT+GGG | + | chr3_1:91116332-91116351 | None:intergenic | 15.0% |
!!! | TTTCAAAGAATGTTTTATTT+TGG | + | chr3_1:91116333-91116352 | None:intergenic | 15.0% |
!!! | ATTTGATAATAAAATAAGAG+AGG | - | chr3_1:91116934-91116953 | Msa0387210:intron | 15.0% |
!! | CTAAAAAAACATAAAAAAAG+GGG | + | chr3_1:91117034-91117053 | None:intergenic | 15.0% |
!!! | CTCTAAAAAAACATAAAAAA+AGG | + | chr3_1:91117036-91117055 | None:intergenic | 15.0% |
!! | TTTAAATATGTTATGAATCA+TGG | + | chr3_1:91117425-91117444 | None:intergenic | 15.0% |
!! | AATTAATAAAAGTTACGATT+TGG | + | chr3_1:91117712-91117731 | None:intergenic | 15.0% |
!!! | ATCGTAACTTTTATTAATTA+AGG | - | chr3_1:91117713-91117732 | Msa0387210:intron | 15.0% |
!!! | TCGTAACTTTTATTAATTAA+GGG | - | chr3_1:91117714-91117733 | Msa0387210:intron | 15.0% |
!!! | ATGGTTAATATATTTTAACT+GGG | + | chr3_1:91117874-91117893 | None:intergenic | 15.0% |
!!! | TTTTTTTTAAAGGATTTGAA+TGG | + | chr3_1:91118056-91118075 | None:intergenic | 15.0% |
!!! | ATTCAAATCCTTTAAAAAAA+AGG | - | chr3_1:91118055-91118074 | Msa0387210:intron | 15.0% |
!!! | TTCAAATCCTTTAAAAAAAA+GGG | - | chr3_1:91118056-91118075 | Msa0387210:intron | 15.0% |
!! | TAAATTTACAAATAACCTAT+TGG | - | chr3_1:91118456-91118475 | Msa0387210:intron | 15.0% |
!!! | AAAGATAATATTTCTATCTT+TGG | + | chr3_1:91118526-91118545 | None:intergenic | 15.0% |
!!! | TACAAATTTTATTTCTTTGT+AGG | + | chr3_1:91118761-91118780 | None:intergenic | 15.0% |
!! | ATATAATGCAATTATTAACT+AGG | - | chr3_1:91119732-91119751 | Msa0387210:intron | 15.0% |
!!! | AAATTTTAGGAATCATATTT+TGG | + | chr3_1:91120638-91120657 | None:intergenic | 15.0% |
!!! | AAGATTTCTAAACAAATTTT+AGG | + | chr3_1:91120651-91120670 | None:intergenic | 15.0% |
!!! | TTTTAATATTGGAAATTGAT+AGG | - | chr3_1:91120736-91120755 | Msa0387210:intron | 15.0% |
!! | TTTAATATTGGAAATTGATA+GGG | - | chr3_1:91120737-91120756 | Msa0387210:intron | 15.0% |
!!! | TTTTATCTAGTAAATAGTAA+TGG | - | chr3_1:91122449-91122468 | Msa0387210:intron | 15.0% |
!! | ATACAAAAACTATACATAAA+CGG | + | chr3_1:91122777-91122796 | None:intergenic | 15.0% |
!!! | TTATGTATAGTTTTTGTATT+TGG | - | chr3_1:91122778-91122797 | Msa0387210:intron | 15.0% |
!!! | CTTTAGGGAAAATTATATAA+AGG | - | chr3_1:91113392-91113411 | Msa0387210:three_prime_UTR | 20.0% |
!!! | TTAAGTAAAACTTCTAAAAC+AGG | + | chr3_1:91113802-91113821 | None:intergenic | 20.0% |
!! | TCAAAAGTGAATATTGAAAA+AGG | + | chr3_1:91113835-91113854 | None:intergenic | 20.0% |
!! | ATTTCATGCTCATTATAAAA+GGG | + | chr3_1:91114600-91114619 | None:intergenic | 20.0% |
!! | AATTTCATGCTCATTATAAA+AGG | + | chr3_1:91114601-91114620 | None:intergenic | 20.0% |
!!! | ATGAGAATTAATAGGTTTTT+TGG | - | chr3_1:91114707-91114726 | Msa0387210:CDS | 20.0% |
!!! | TGAGAATTAATAGGTTTTTT+GGG | - | chr3_1:91114708-91114727 | Msa0387210:CDS | 20.0% |
!!! | GTGTCTAAATAGATTTTATT+CGG | + | chr3_1:91114865-91114884 | None:intergenic | 20.0% |
!!! | ATGAAAAGATAAATGGTTTT+AGG | - | chr3_1:91115129-91115148 | Msa0387210:intron | 20.0% |
!!! | TAGATTGTCTTTAAAGTATT+CGG | - | chr3_1:91115431-91115450 | Msa0387210:intron | 20.0% |
!! | ATACCAAATAAAAAAACTCA+TGG | + | chr3_1:91115594-91115613 | None:intergenic | 20.0% |
!! | TGAATCTTAAAAAGACATTT+AGG | - | chr3_1:91115687-91115706 | Msa0387210:CDS | 20.0% |
!! | GTTATAAACAAATGTCAAAA+AGG | - | chr3_1:91115716-91115735 | Msa0387210:CDS | 20.0% |
!! | GAAACCTGAAAAATATTTAA+GGG | + | chr3_1:91117745-91117764 | None:intergenic | 20.0% |
!! | TGAAACCTGAAAAATATTTA+AGG | + | chr3_1:91117744-91117763 | None:intergenic | 20.0% |
!!! | ATATTTTTCAGGTTTCATAT+TGG | - | chr3_1:91115964-91115983 | Msa0387210:CDS | 20.0% |
!!! | TCGTAACTTTTATTAATTAG+GGG | + | chr3_1:91115991-91116010 | None:intergenic | 20.0% |
!!! | GATCGTAACTTTTATTAATT+AGG | + | chr3_1:91115993-91116012 | None:intergenic | 20.0% |
!! | AATTAATAAAAGTTACGATC+TGG | - | chr3_1:91115993-91116012 | Msa0387210:CDS | 20.0% |
!! | GGTTTATGTTAAAAAAAGTT+TGG | - | chr3_1:91116059-91116078 | Msa0387210:CDS | 20.0% |
!!! | TGGTTGTTTTAAAACTAAAA+GGG | + | chr3_1:91116165-91116184 | None:intergenic | 20.0% |
!!! | GTTTGTTTTCTAGAATATAA+GGG | + | chr3_1:91116195-91116214 | None:intergenic | 20.0% |
!!! | TGTTTGTTTTCTAGAATATA+AGG | + | chr3_1:91116196-91116215 | None:intergenic | 20.0% |
!!! | TTTTCTTCTTCTTTTATACA+AGG | - | chr3_1:91116274-91116293 | Msa0387210:CDS | 20.0% |
!!! | TTGTTTTGTTTTTACTCAAT+TGG | + | chr3_1:91116418-91116437 | None:intergenic | 20.0% |
!! | AGTAAAAACAAAACAAAGAA+AGG | - | chr3_1:91116422-91116441 | Msa0387210:intron | 20.0% |
!! | GTAAAAACAAAACAAAGAAA+GGG | - | chr3_1:91116423-91116442 | Msa0387210:intron | 20.0% |
!! | TAAAAACAAAACAAAGAAAG+GGG | - | chr3_1:91116424-91116443 | Msa0387210:intron | 20.0% |
!! | ATGGAAAATAAGAAAATTGA+GGG | + | chr3_1:91117141-91117160 | None:intergenic | 20.0% |
!!! | TACTATCATTATCGTTTTAA+GGG | + | chr3_1:91117374-91117393 | None:intergenic | 20.0% |
!!! | TTACTATCATTATCGTTTTA+AGG | + | chr3_1:91117375-91117394 | None:intergenic | 20.0% |
!!! | ATATTTTTCAGGTTTCATAT+TGG | + | chr3_1:91115964-91115983 | None:intergenic | 20.0% |
!! | TGAAACCTGAAAAATATTTA+AGG | - | chr3_1:91117744-91117763 | Msa0387210:intron | 20.0% |
!! | GAAACCTGAAAAATATTTAA+GGG | - | chr3_1:91117745-91117764 | Msa0387210:intron | 20.0% |
!! | TTAAGCCAAAAAAAAAAACA+TGG | - | chr3_1:91117781-91117800 | Msa0387210:intron | 20.0% |
!!! | TCAAACCATGTTTTTTTTTT+TGG | + | chr3_1:91117789-91117808 | None:intergenic | 20.0% |
!!! | CATGGTTAATATATTTTAAC+TGG | + | chr3_1:91117875-91117894 | None:intergenic | 20.0% |
!! | CTGTCTTTAAATATTTAATG+CGG | - | chr3_1:91117900-91117919 | Msa0387210:CDS | 20.0% |
!!! | TAACAGTGGAATTTTTTTTA+GGG | + | chr3_1:91118096-91118115 | None:intergenic | 20.0% |
!! | CAAGAGAATATTTCAATATT+TGG | - | chr3_1:91118602-91118621 | Msa0387210:intron | 20.0% |
!! | AAAATTTGTATACTTGAAAC+AGG | - | chr3_1:91118771-91118790 | Msa0387210:intron | 20.0% |
!! | AGTAAATTCTCAAGTTATTA+AGG | + | chr3_1:91118903-91118922 | None:intergenic | 20.0% |
!!! | AACTTGAGAATTTACTTTTT+TGG | - | chr3_1:91118907-91118926 | Msa0387210:intron | 20.0% |
!! | TAATTGTAAATTTCTGTTTC+TGG | + | chr3_1:91119135-91119154 | None:intergenic | 20.0% |
!! | GAAACATCAGATTAATTAAA+AGG | + | chr3_1:91119643-91119662 | None:intergenic | 20.0% |
!! | TCCATTAACAGAAAAATAAT+TGG | + | chr3_1:91119807-91119826 | None:intergenic | 20.0% |
!! | TCAATTTCCAATATTAAAAC+AGG | + | chr3_1:91120735-91120754 | None:intergenic | 20.0% |
!!! | CGAAGTGTTTATTTATTTAA+TGG | - | chr3_1:91120915-91120934 | Msa0387210:intron | 20.0% |
!! | CATAAGAATAATTGATCATA+TGG | + | chr3_1:91120978-91120997 | None:intergenic | 20.0% |
!! | ATATTTCTTCTGAATTGATA+AGG | + | chr3_1:91121654-91121673 | None:intergenic | 20.0% |
!! | TATAGCTAACTAAGTAAAAA+TGG | - | chr3_1:91121850-91121869 | Msa0387210:CDS | 20.0% |
!! | TTAATATTAAGTTCTTGTTG+AGG | + | chr3_1:91121893-91121912 | None:intergenic | 20.0% |
!!! | AGATTTTTATGTGTTTGTTT+GGG | - | chr3_1:91121917-91121936 | Msa0387210:intron | 20.0% |
!! | ATGATTTATATCAATTTCCT+TGG | - | chr3_1:91122698-91122717 | Msa0387210:intron | 20.0% |
!! | TGATTTATATCAATTTCCTT+GGG | - | chr3_1:91122699-91122718 | Msa0387210:intron | 20.0% |
! | AATATCCAAAGTGAATTATG+TGG | - | chr3_1:91114022-91114041 | Msa0387210:CDS | 25.0% |
!!! | CTGGTCTTAAAATTAAACAT+TGG | + | chr3_1:91114128-91114147 | None:intergenic | 25.0% |
! | AGTCATCATGAATAATGAAA+CGG | - | chr3_1:91114488-91114507 | Msa0387210:intron | 25.0% |
!!! | GAGAATTAATAGGTTTTTTG+GGG | - | chr3_1:91114709-91114728 | Msa0387210:CDS | 25.0% |
!!! | AGAATTAATAGGTTTTTTGG+GGG | - | chr3_1:91114710-91114729 | Msa0387210:CDS | 25.0% |
! | TTAAGTGTATAGAACATAGA+AGG | - | chr3_1:91114932-91114951 | Msa0387210:CDS | 25.0% |
! | TAAGTGTATAGAACATAGAA+GGG | - | chr3_1:91114933-91114952 | Msa0387210:CDS | 25.0% |
!!! | AGTTGGTTGATTTTAGTAAA+AGG | - | chr3_1:91114983-91115002 | Msa0387210:CDS | 25.0% |
! | AATGTGGATGAAAAGATAAA+TGG | - | chr3_1:91115122-91115141 | Msa0387210:intron | 25.0% |
! | TGGAGCTTAAATTTAATAGA+CGG | - | chr3_1:91115189-91115208 | Msa0387210:intron | 25.0% |
! | AAAATCAAGAGATGAGAAAA+AGG | - | chr3_1:91115361-91115380 | Msa0387210:intron | 25.0% |
! | TTATAGCTAATTAGCTATGA+GGG | + | chr3_1:91115507-91115526 | None:intergenic | 25.0% |
!!! | TAGCCATGAGTTTTTTTATT+TGG | - | chr3_1:91115588-91115607 | Msa0387210:intron | 25.0% |
! | AGAAAATTCATCATATAGAG+TGG | + | chr3_1:91115622-91115641 | None:intergenic | 25.0% |
!! | CTATATGATGAATTTTCTCT+AGG | - | chr3_1:91115624-91115643 | Msa0387210:intron | 25.0% |
! | TTTAACATAAACCAACAGAA+GGG | + | chr3_1:91116052-91116071 | None:intergenic | 25.0% |
!! | TTTTAACATAAACCAACAGA+AGG | + | chr3_1:91116053-91116072 | None:intergenic | 25.0% |
! | TTAAAAAAAGTTTGGAAACG+TGG | - | chr3_1:91116067-91116086 | Msa0387210:CDS | 25.0% |
! | ATTTAGTAAAAACTTAAGGG+AGG | + | chr3_1:91116132-91116151 | None:intergenic | 25.0% |
!!! | GTGGTTGTTTTAAAACTAAA+AGG | + | chr3_1:91116166-91116185 | None:intergenic | 25.0% |
!! | TCTTTATCCCAAGAAATTTT+AGG | + | chr3_1:91116535-91116554 | None:intergenic | 25.0% |
! | TCTATTTATTGTGATTGTGT+AGG | + | chr3_1:91116780-91116799 | None:intergenic | 25.0% |
! | GAGAGTTAACATAGATTTAA+TGG | - | chr3_1:91116883-91116902 | Msa0387210:intron | 25.0% |
!! | TAGATTTAATGGTGTTAAGA+TGG | - | chr3_1:91116894-91116913 | Msa0387210:intron | 25.0% |
!! | ATGTTATTTAAGACAACCTT+AGG | - | chr3_1:91116990-91117009 | Msa0387210:intron | 25.0% |
!! | TGTTATTTAAGACAACCTTA+GGG | - | chr3_1:91116991-91117010 | Msa0387210:intron | 25.0% |
!!! | TATGTTTTTTTAGAGAGAGA+TGG | - | chr3_1:91117041-91117060 | Msa0387210:CDS | 25.0% |
!!! | ATGTTTTTTTAGAGAGAGAT+GGG | - | chr3_1:91117042-91117061 | Msa0387210:CDS | 25.0% |
! | AATGATGAATCCTAATTTCT+GGG | + | chr3_1:91117109-91117128 | None:intergenic | 25.0% |
! | AAAATAAGAAAATTGAGGGA+TGG | + | chr3_1:91117137-91117156 | None:intergenic | 25.0% |
! | GATGGAAAATAAGAAAATTG+AGG | + | chr3_1:91117142-91117161 | None:intergenic | 25.0% |
!! | AAATTCCTTGCTGATTAAAA+AGG | - | chr3_1:91117215-91117234 | Msa0387210:CDS | 25.0% |
!! | AATTCCTTGCTGATTAAAAA+GGG | - | chr3_1:91117216-91117235 | Msa0387210:CDS | 25.0% |
! | ATATAATTCACGATACTACA+TGG | - | chr3_1:91117252-91117271 | Msa0387210:intron | 25.0% |
! | TTGTGAATCTGTACAATTAT+CGG | - | chr3_1:91117299-91117318 | Msa0387210:intron | 25.0% |
!! | ATTATCGGATGCATTTATTT+TGG | - | chr3_1:91117314-91117333 | Msa0387210:intron | 25.0% |
! | TATTAACACAAACTAACAGA+AGG | - | chr3_1:91117655-91117674 | Msa0387210:intron | 25.0% |
! | ATTAACACAAACTAACAGAA+GGG | - | chr3_1:91117656-91117675 | Msa0387210:intron | 25.0% |
!!! | TTTTGGCTTAATTACACTTT+TGG | + | chr3_1:91117772-91117791 | None:intergenic | 25.0% |
! | ATACAAGAAACCTAATTGTA+AGG | + | chr3_1:91117820-91117839 | None:intergenic | 25.0% |
! | ACAATTAGGTTTCTTGTATT+TGG | - | chr3_1:91117821-91117840 | Msa0387210:intron | 25.0% |
!! | TATTTAAAGACAGTTTTGCA+TGG | + | chr3_1:91117893-91117912 | None:intergenic | 25.0% |
!!! | AACAAGACCCTTTTTTTTAA+AGG | + | chr3_1:91118066-91118085 | None:intergenic | 25.0% |
!!! | GTAACAGTGGAATTTTTTTT+AGG | + | chr3_1:91118097-91118116 | None:intergenic | 25.0% |
! | TCTAAAAAATGCTTTGTAGT+TGG | - | chr3_1:91118145-91118164 | Msa0387210:intron | 25.0% |
! | CGAACTACATAAATAAGTTA+GGG | + | chr3_1:91118666-91118685 | None:intergenic | 25.0% |
! | CCTAACTTATTTATGTAGTT+CGG | - | chr3_1:91118664-91118683 | Msa0387210:intron | 25.0% |
!! | TAAAAAGTATGCTGATGATA+TGG | + | chr3_1:91118969-91118988 | None:intergenic | 25.0% |
! | TTGAAGAATATGGAGAAAAT+TGG | + | chr3_1:91119015-91119034 | None:intergenic | 25.0% |
! | TGAGTTTCTATTGAAGAATA+TGG | + | chr3_1:91119025-91119044 | None:intergenic | 25.0% |
! | TATTCTTCAATAGAAACTCA+AGG | - | chr3_1:91119025-91119044 | Msa0387210:intron | 25.0% |
! | ATGCTCTGTATAATGATTTA+TGG | - | chr3_1:91119227-91119246 | Msa0387210:intron | 25.0% |
! | TAGAAAAGATGGTAGAAAAT+AGG | - | chr3_1:91119326-91119345 | Msa0387210:intron | 25.0% |
! | GTTCTATCATAAACCATATT+TGG | + | chr3_1:91119509-91119528 | None:intergenic | 25.0% |
! | TATGATAGAACATTACGTTA+CGG | - | chr3_1:91119518-91119537 | Msa0387210:intron | 25.0% |
!!! | GCCAATTATTTTTCTGTTAA+TGG | - | chr3_1:91119803-91119822 | Msa0387210:intron | 25.0% |
!!! | AGAAATCTTTACTTTTTCCT+TGG | - | chr3_1:91120662-91120681 | Msa0387210:intron | 25.0% |
!!! | GAAATCTTTACTTTTTCCTT+GGG | - | chr3_1:91120663-91120682 | Msa0387210:intron | 25.0% |
!!! | AACTAAGCCTGTTTTAATAT+TGG | - | chr3_1:91120725-91120744 | Msa0387210:intron | 25.0% |
!!! | ACATGCAAAGCATTTTTTTT+GGG | + | chr3_1:91120806-91120825 | None:intergenic | 25.0% |
! | CATTATTTAACTAACGTAAC+TGG | + | chr3_1:91120852-91120871 | None:intergenic | 25.0% |
! | TGTTATGTCAAAAACAAGTT+TGG | - | chr3_1:91120876-91120895 | Msa0387210:intron | 25.0% |
! | GTTATGTCAAAAACAAGTTT+GGG | - | chr3_1:91120877-91120896 | Msa0387210:intron | 25.0% |
! | TTATGTCAAAAACAAGTTTG+GGG | - | chr3_1:91120878-91120897 | Msa0387210:intron | 25.0% |
! | ATTCTTATGAAAACCTAGAT+TGG | - | chr3_1:91120989-91121008 | Msa0387210:intron | 25.0% |
!! | AACTATTTTATTCCATGGTA+GGG | - | chr3_1:91121154-91121173 | Msa0387210:intron | 25.0% |
! | TCAATTCAGAAGAAATATAG+AGG | - | chr3_1:91121656-91121675 | Msa0387210:CDS | 25.0% |
! | AACAAACACATAAAAATCTG+AGG | + | chr3_1:91121916-91121935 | None:intergenic | 25.0% |
!! | CAGATTTTTATGTGTTTGTT+TGG | - | chr3_1:91121916-91121935 | Msa0387210:intron | 25.0% |
!!! | TCTTTTGAATCTATTTCTTG+TGG | + | chr3_1:91122063-91122082 | None:intergenic | 25.0% |
!! | TATTTCTGAATGCAAAAAGT+GGG | + | chr3_1:91122308-91122327 | None:intergenic | 25.0% |
!!! | TTATTTCTGAATGCAAAAAG+TGG | + | chr3_1:91122309-91122328 | None:intergenic | 25.0% |
! | ATGAATTCATTCTTTGTTAG+TGG | - | chr3_1:91122413-91122432 | Msa0387210:intron | 25.0% |
! | TACTAGATAAAATCTCATAC+TGG | + | chr3_1:91122441-91122460 | None:intergenic | 25.0% |
!! | TAGTAAATAGTAATGGAAGT+AGG | - | chr3_1:91122456-91122475 | Msa0387210:intron | 25.0% |
! | TTATGCATTATTCAAACCAA+AGG | + | chr3_1:91122563-91122582 | None:intergenic | 25.0% |
!! | TGGTTTATTTGTCTCTATTT+TGG | - | chr3_1:91122739-91122758 | Msa0387210:intron | 25.0% |
! | GATATGTAGAACAAACTTTA+AGG | - | chr3_1:91122800-91122819 | Msa0387210:intron | 25.0% |
! | AACATTATACACTAAGAAAG+TGG | + | chr3_1:91122953-91122972 | None:intergenic | 25.0% |
GGTAAGCTTAATAATACGAA+GGG | + | chr3_1:91113338-91113357 | None:intergenic | 30.0% | |
TGGTAAGCTTAATAATACGA+AGG | + | chr3_1:91113339-91113358 | None:intergenic | 30.0% | |
TTTGAAAATACAACATGCAG+TGG | + | chr3_1:91113359-91113378 | None:intergenic | 30.0% | |
AAACCCTTCGTAAAAACTTT+AGG | - | chr3_1:91113376-91113395 | Msa0387210:three_prime_UTR | 30.0% | |
AACCCTTCGTAAAAACTTTA+GGG | - | chr3_1:91113377-91113396 | Msa0387210:three_prime_UTR | 30.0% | |
! | TTCCCTAAAGTTTTTACGAA+GGG | + | chr3_1:91113382-91113401 | None:intergenic | 30.0% |
! | TTTCCCTAAAGTTTTTACGA+AGG | + | chr3_1:91113383-91113402 | None:intergenic | 30.0% |
! | ATGTTAGAAGTGTGAAAACT+GGG | - | chr3_1:91113736-91113755 | Msa0387210:intron | 30.0% |
!! | AGAAAAAGAGTACATTTTGG+AGG | + | chr3_1:91114054-91114073 | None:intergenic | 30.0% |
! | TCCAAAATGTACTCTTTTTC+TGG | - | chr3_1:91114053-91114072 | Msa0387210:CDS | 30.0% |
!! | ACCAGAAAAAGAGTACATTT+TGG | + | chr3_1:91114057-91114076 | None:intergenic | 30.0% |
!! | AAATGTACTCTTTTTCTGGT+CGG | - | chr3_1:91114057-91114076 | Msa0387210:CDS | 30.0% |
!!! | TTTTAAGACCAGATTCTCTT+TGG | - | chr3_1:91114136-91114155 | Msa0387210:CDS | 30.0% |
TAATGACTCAACTTTCTGAA+TGG | - | chr3_1:91114210-91114229 | Msa0387210:CDS | 30.0% | |
AACTTAATTGTTCCTCCAAT+TGG | + | chr3_1:91114548-91114567 | None:intergenic | 30.0% | |
GGAACAATTAAGTTTGAATG+AGG | - | chr3_1:91114554-91114573 | Msa0387210:CDS | 30.0% | |
TATGGTTGTTTATGATCATC+TGG | + | chr3_1:91114642-91114661 | None:intergenic | 30.0% | |
GATCATAAACAACCATATGA+TGG | - | chr3_1:91114645-91114664 | Msa0387210:CDS | 30.0% | |
!! | CAACCATATGATGGATATAA+TGG | - | chr3_1:91114654-91114673 | Msa0387210:CDS | 30.0% |
GTTCCATTATATCCATCATA+TGG | + | chr3_1:91114660-91114679 | None:intergenic | 30.0% | |
! | GATGGATATAATGGAACAAA+AGG | - | chr3_1:91114663-91114682 | Msa0387210:CDS | 30.0% |
TAGGATAAATGCTCAACATA+AGG | + | chr3_1:91114815-91114834 | None:intergenic | 30.0% | |
TTAAAACCCAAAAAACAGCT+AGG | - | chr3_1:91115050-91115069 | Msa0387210:intron | 30.0% | |
GGAGCTTAAATTTAATAGAC+GGG | - | chr3_1:91115190-91115209 | Msa0387210:intron | 30.0% | |
CTTATAGCTAATTAGCTATG+AGG | + | chr3_1:91115508-91115527 | None:intergenic | 30.0% | |
GATATAGAGAATGAGGAATT+GGG | + | chr3_1:91115653-91115672 | None:intergenic | 30.0% | |
AGATATAGAGAATGAGGAAT+TGG | + | chr3_1:91115654-91115673 | None:intergenic | 30.0% | |
! | GCCTCTTGTTAATCTATTTT+TGG | - | chr3_1:91115791-91115810 | Msa0387210:CDS | 30.0% |
GCCAAAAATAGATTAACAAG+AGG | + | chr3_1:91115795-91115814 | None:intergenic | 30.0% | |
ATTAACCTCTTGCAATTACT+TGG | + | chr3_1:91115825-91115844 | None:intergenic | 30.0% | |
! | AAAGGGCTTAATTACACTTT+TGG | - | chr3_1:91115933-91115952 | Msa0387210:CDS | 30.0% |
! | TGGTCCCTTAAATATTTTTC+AGG | - | chr3_1:91115953-91115972 | Msa0387210:CDS | 30.0% |
!!! | TGTTTTCTAGAATATAAGGG+TGG | + | chr3_1:91116192-91116211 | None:intergenic | 30.0% |
TGCAAACACCTAAAATTTCT+TGG | - | chr3_1:91116524-91116543 | Msa0387210:intron | 30.0% | |
GCAAACACCTAAAATTTCTT+GGG | - | chr3_1:91116525-91116544 | Msa0387210:intron | 30.0% | |
! | GAAAGTAGGTAATCTAGAAT+GGG | + | chr3_1:91116568-91116587 | None:intergenic | 30.0% |
TGAAAGTAGGTAATCTAGAA+TGG | + | chr3_1:91116569-91116588 | None:intergenic | 30.0% | |
TTACCTACTTTCAAGATTCA+CGG | - | chr3_1:91116576-91116595 | Msa0387210:intron | 30.0% | |
!!! | CCTAAACCTTTTTTGAGAAT+GGG | - | chr3_1:91116637-91116656 | Msa0387210:intron | 30.0% |
GTAAATCCCATTCTCAAAAA+AGG | + | chr3_1:91116646-91116665 | None:intergenic | 30.0% | |
! | TTTAATGGTGTTAAGATGGA+AGG | - | chr3_1:91116898-91116917 | Msa0387210:intron | 30.0% |
! | TTAATGGTGTTAAGATGGAA+GGG | - | chr3_1:91116899-91116918 | Msa0387210:intron | 30.0% |
! | GTTATTTAAGACAACCTTAG+GGG | - | chr3_1:91116992-91117011 | Msa0387210:intron | 30.0% |
TCGAATAAAACCCAGAAATT+AGG | - | chr3_1:91117096-91117115 | Msa0387210:CDS | 30.0% | |
GAATGATGAATCCTAATTTC+TGG | + | chr3_1:91117110-91117129 | None:intergenic | 30.0% | |
! | TTGAAGATATAGAAAGCACA+AGG | + | chr3_1:91117194-91117213 | None:intergenic | 30.0% |
AATCATGGAGTATACATTGT+TGG | + | chr3_1:91117410-91117429 | None:intergenic | 30.0% | |
ATTCAAATAGAGAAAGAGAG+TGG | + | chr3_1:91117580-91117599 | None:intergenic | 30.0% | |
AACCTTAAGTTATTAACACG+CGG | + | chr3_1:91117634-91117653 | None:intergenic | 30.0% | |
! | TGGTCCCTTAAATATTTTTC+AGG | + | chr3_1:91115953-91115972 | None:intergenic | 30.0% |
TTCAGAGAAAAATGTAACAG+TGG | + | chr3_1:91118110-91118129 | None:intergenic | 30.0% | |
! | TTTTTCCTTTACCCTCTTTA+CGG | + | chr3_1:91118201-91118220 | None:intergenic | 30.0% |
CCGAACTACATAAATAAGTT+AGG | + | chr3_1:91118667-91118686 | None:intergenic | 30.0% | |
! | TTCTCATCATTATTGCTGTT+GGG | + | chr3_1:91118862-91118881 | None:intergenic | 30.0% |
CAATAATGATGAGAACTGTA+TGG | - | chr3_1:91118867-91118886 | Msa0387210:intron | 30.0% | |
ATTGGCATAACAATATTCTG+GGG | + | chr3_1:91119167-91119186 | None:intergenic | 30.0% | |
CATTGGCATAACAATATTCT+GGG | + | chr3_1:91119168-91119187 | None:intergenic | 30.0% | |
TCATTGGCATAACAATATTC+TGG | + | chr3_1:91119169-91119188 | None:intergenic | 30.0% | |
AGAATATTGTTATGCCAATG+AGG | - | chr3_1:91119168-91119187 | Msa0387210:intron | 30.0% | |
! | TCTACCATCTTTTCTACTAT+AGG | + | chr3_1:91119322-91119341 | None:intergenic | 30.0% |
!! | AAAATAGGCTTAGGTTGATT+GGG | - | chr3_1:91119341-91119360 | Msa0387210:intron | 30.0% |
AACTACAAGAGAAACTATTG+TGG | - | chr3_1:91119456-91119475 | Msa0387210:intron | 30.0% | |
! | TAATGAGTTGGATCCAAATA+TGG | - | chr3_1:91119493-91119512 | Msa0387210:intron | 30.0% |
TAACAGAAAAATAATTGGCG+AGG | + | chr3_1:91119802-91119821 | None:intergenic | 30.0% | |
ATTACAGTGAATGCAACTAT+TGG | + | chr3_1:91120115-91120134 | None:intergenic | 30.0% | |
! | TTGCATTCACTGTAATGTTT+TGG | - | chr3_1:91120119-91120138 | Msa0387210:intron | 30.0% |
ACAAGTAATAACAGTTCTTC+TGG | + | chr3_1:91120165-91120184 | None:intergenic | 30.0% | |
! | TATACACATAGTTTCTGGAT+TGG | - | chr3_1:91120455-91120474 | Msa0387210:intron | 30.0% |
! | ATACACATAGTTTCTGGATT+GGG | - | chr3_1:91120456-91120475 | Msa0387210:intron | 30.0% |
GTTAATTTCCGTGATATCAA+TGG | - | chr3_1:91120522-91120541 | Msa0387210:intron | 30.0% | |
!!! | TTTACTTTTTCCTTGGGAAA+AGG | - | chr3_1:91120669-91120688 | Msa0387210:intron | 30.0% |
! | GAAAAGGAAGTACATATACA+AGG | - | chr3_1:91120685-91120704 | Msa0387210:intron | 30.0% |
!! | GCAAAGCATTTTATTATACG+TGG | + | chr3_1:91120777-91120796 | None:intergenic | 30.0% |
!!! | GACATGCAAAGCATTTTTTT+TGG | + | chr3_1:91120807-91120826 | None:intergenic | 30.0% |
! | AACATCTAGAGCATTAAGAA+TGG | + | chr3_1:91121120-91121139 | None:intergenic | 30.0% |
! | CACTGAACTATTTTATTCCA+TGG | - | chr3_1:91121149-91121168 | Msa0387210:intron | 30.0% |
! | GAACTATTTTATTCCATGGT+AGG | - | chr3_1:91121153-91121172 | Msa0387210:intron | 30.0% |
GATTCACTAAGAAATACCTT+GGG | - | chr3_1:91121452-91121471 | Msa0387210:intron | 30.0% | |
GAGAGAGATGGAAAAATAAA+AGG | - | chr3_1:91121825-91121844 | Msa0387210:CDS | 30.0% | |
GCAATACAAGCTAATGATAT+GGG | - | chr3_1:91121972-91121991 | Msa0387210:intron | 30.0% | |
!! | TGATGATGAAGATTTTCTCA+AGG | - | chr3_1:91122089-91122108 | Msa0387210:intron | 30.0% |
TATTTCCGAAAGCAAAAAGT+GGG | + | chr3_1:91122275-91122294 | None:intergenic | 30.0% | |
TTATTTCCGAAAGCAAAAAG+TGG | + | chr3_1:91122276-91122295 | None:intergenic | 30.0% | |
AACATGAAATAGCATCTTTC+TGG | + | chr3_1:91122340-91122359 | None:intergenic | 30.0% | |
GTTATTTAATCAGATCAGCA+TGG | + | chr3_1:91122393-91122412 | None:intergenic | 30.0% | |
ATAACTTACCATTCTCTTAC+AGG | - | chr3_1:91122579-91122598 | Msa0387210:intron | 30.0% | |
TAGAGACAAATAAACCATGA+AGG | + | chr3_1:91122736-91122755 | None:intergenic | 30.0% | |
TAGGTTGTACATAGTGATAA+AGG | - | chr3_1:91122843-91122862 | Msa0387210:intron | 30.0% | |
ACTTCATCGAATGTACAAAA+TGG | - | chr3_1:91122880-91122899 | Msa0387210:intron | 30.0% | |
TAAGCTAATAGTTTACGCAC+GGG | + | chr3_1:91113311-91113330 | None:intergenic | 35.0% | |
GTAAGCTAATAGTTTACGCA+CGG | + | chr3_1:91113312-91113331 | None:intergenic | 35.0% | |
GGCAAAGTCAGATTATACTT+CGG | - | chr3_1:91113413-91113432 | Msa0387210:three_prime_UTR | 35.0% | |
GCATTACAGAGAAACAAATG+AGG | - | chr3_1:91113669-91113688 | Msa0387210:intron | 35.0% | |
! | CATGTTAGAAGTGTGAAAAC+TGG | - | chr3_1:91113735-91113754 | Msa0387210:intron | 35.0% |
! | TGTTAGAAGTGTGAAAACTG+GGG | - | chr3_1:91113737-91113756 | Msa0387210:intron | 35.0% |
ATGGACCACATAATTCACTT+TGG | + | chr3_1:91114030-91114049 | None:intergenic | 35.0% | |
!! | AAGAGTACATTTTGGAGGTA+TGG | + | chr3_1:91114049-91114068 | None:intergenic | 35.0% |
!! | AATGTACTCTTTTTCTGGTC+GGG | - | chr3_1:91114058-91114077 | Msa0387210:CDS | 35.0% |
AGATATACCAATTCACAGGA+GGG | + | chr3_1:91114255-91114274 | None:intergenic | 35.0% | |
! | TGTTTTCACCCATATGTTAC+AGG | - | chr3_1:91114305-91114324 | Msa0387210:intron | 35.0% |
! | GTTTTCACCCATATGTTACA+GGG | - | chr3_1:91114306-91114325 | Msa0387210:intron | 35.0% |
! | TTTTCACCCATATGTTACAG+GGG | - | chr3_1:91114307-91114326 | Msa0387210:intron | 35.0% |
TTCACATGAATCACCAACTA+TGG | + | chr3_1:91114418-91114437 | None:intergenic | 35.0% | |
ATTCATGATGACTATATCCG+AGG | + | chr3_1:91114481-91114500 | None:intergenic | 35.0% | |
TCATGCTCATTATAAAAGGG+AGG | + | chr3_1:91114597-91114616 | None:intergenic | 35.0% | |
CTTGCACGATGAGAATTAAT+AGG | - | chr3_1:91114699-91114718 | Msa0387210:CDS | 35.0% | |
!!! | TTAATAGGTTTTTTGGGGGT+TGG | - | chr3_1:91114714-91114733 | Msa0387210:CDS | 35.0% |
!!! | TAATAGGTTTTTTGGGGGTT+GGG | - | chr3_1:91114715-91114734 | Msa0387210:CDS | 35.0% |
CTAAGATGTTTGACTGAACT+AGG | + | chr3_1:91114787-91114806 | None:intergenic | 35.0% | |
AGGAACAAAAGAATGCTTTG+AGG | - | chr3_1:91115003-91115022 | Msa0387210:CDS | 35.0% | |
TTGAGGATGATCTTAATCAG+TGG | - | chr3_1:91115020-91115039 | Msa0387210:CDS | 35.0% | |
!!! | TTGCAACCTAGCTGTTTTTT+GGG | + | chr3_1:91115059-91115078 | None:intergenic | 35.0% |
!!! | TTTGCAACCTAGCTGTTTTT+TGG | + | chr3_1:91115060-91115079 | None:intergenic | 35.0% |
AATATAGCGCATGAAATGAG+AGG | - | chr3_1:91115091-91115110 | Msa0387210:intron | 35.0% | |
ATGAGAGGAGTTAGAAAATG+TGG | - | chr3_1:91115106-91115125 | Msa0387210:intron | 35.0% | |
ATTGCATCTTACCAAAGAAG+AGG | - | chr3_1:91115159-91115178 | Msa0387210:intron | 35.0% | |
TTGCATCTTACCAAAGAAGA+GGG | - | chr3_1:91115160-91115179 | Msa0387210:intron | 35.0% | |
AAAACAGCGTATGAAATGAG+AGG | - | chr3_1:91115256-91115275 | Msa0387210:intron | 35.0% | |
ATGAGAGGAGTTACAAAGAT+TGG | - | chr3_1:91115271-91115290 | Msa0387210:intron | 35.0% | |
! | TTTGCCGATTACAAAAGAAG+AGG | - | chr3_1:91115323-91115342 | Msa0387210:intron | 35.0% |
! | TTGCCGATTACAAAAGAAGA+GGG | - | chr3_1:91115324-91115343 | Msa0387210:intron | 35.0% |
! | TCACCCTCTTCTTTTGTAAT+CGG | + | chr3_1:91115330-91115349 | None:intergenic | 35.0% |
AAAAGAAGAGGGTGATGATA+GGG | - | chr3_1:91115335-91115354 | Msa0387210:intron | 35.0% | |
ATAGATCTTTGTCATCTACC+TGG | - | chr3_1:91115456-91115475 | Msa0387210:intron | 35.0% | |
TAGATCTTTGTCATCTACCT+GGG | - | chr3_1:91115457-91115476 | Msa0387210:intron | 35.0% | |
CTAATTAGCTATGAGGGTAA+AGG | + | chr3_1:91115501-91115520 | None:intergenic | 35.0% | |
AAGCAGGTATGCTGTAAATT+TGG | + | chr3_1:91115545-91115564 | None:intergenic | 35.0% | |
CAATCGAGATATAGAGAATG+AGG | + | chr3_1:91115660-91115679 | None:intergenic | 35.0% | |
ATTGCAAGAGGTTAATTCCA+CGG | - | chr3_1:91115829-91115848 | Msa0387210:CDS | 35.0% | |
ACATAACCAAGGGGAAAAAA+AGG | - | chr3_1:91115915-91115934 | Msa0387210:CDS | 35.0% | |
CATAACCAAGGGGAAAAAAA+GGG | - | chr3_1:91115916-91115935 | Msa0387210:CDS | 35.0% | |
TAGAATATAAGGGTGGTTAG+TGG | + | chr3_1:91116185-91116204 | None:intergenic | 35.0% | |
CATCTGTCACAAATGTAGAA+TGG | + | chr3_1:91116383-91116402 | None:intergenic | 35.0% | |
! | GGTCATTCGCTATTTGTTAA+TGG | + | chr3_1:91116613-91116632 | None:intergenic | 35.0% |
CTCAAAAAAGGTTTAGGCAA+TGG | + | chr3_1:91116634-91116653 | None:intergenic | 35.0% | |
!!! | GCCTAAACCTTTTTTGAGAA+TGG | - | chr3_1:91116636-91116655 | Msa0387210:intron | 35.0% |
CCCATTCTCAAAAAAGGTTT+AGG | + | chr3_1:91116640-91116659 | None:intergenic | 35.0% | |
GAAGAGAGAAAACTTAACAG+TGG | - | chr3_1:91116798-91116817 | Msa0387210:intron | 35.0% | |
AAAGAGCTCATAACAATGTG+AGG | - | chr3_1:91116852-91116871 | Msa0387210:intron | 35.0% | |
AAGAGCTCATAACAATGTGA+GGG | - | chr3_1:91116853-91116872 | Msa0387210:intron | 35.0% | |
AAATAAGAGAGGTTAGTGTC+TGG | - | chr3_1:91116945-91116964 | Msa0387210:intron | 35.0% | |
! | AGTGTCTGGTTTGAAACTAA+AGG | - | chr3_1:91116959-91116978 | Msa0387210:intron | 35.0% |
! | GTGTCTGGTTTGAAACTAAA+GGG | - | chr3_1:91116960-91116979 | Msa0387210:intron | 35.0% |
! | TGTCTGGTTTGAAACTAAAG+GGG | - | chr3_1:91116961-91116980 | Msa0387210:intron | 35.0% |
AATTAAACTAACCTCCCCTA+AGG | + | chr3_1:91117009-91117028 | None:intergenic | 35.0% | |
TTTAGAGAGAGATGGGAATA+CGG | - | chr3_1:91117049-91117068 | Msa0387210:CDS | 35.0% | |
GGAATACGGTTCAAATAGAA+AGG | - | chr3_1:91117063-91117082 | Msa0387210:CDS | 35.0% | |
GGTTCAAATAGAAAGGAAAG+AGG | - | chr3_1:91117070-91117089 | Msa0387210:CDS | 35.0% | |
GAAAAGAAGAAGCAAATCGA+TGG | + | chr3_1:91117160-91117179 | None:intergenic | 35.0% | |
! | ATAGCCCTTTTTAATCAGCA+AGG | + | chr3_1:91117223-91117242 | None:intergenic | 35.0% |
ATTCACAAACCAAGAAATGG+AGG | + | chr3_1:91117287-91117306 | None:intergenic | 35.0% | |
CAGATTCACAAACCAAGAAA+TGG | + | chr3_1:91117290-91117309 | None:intergenic | 35.0% | |
ATGGAGTATACATTGTTGGA+AGG | + | chr3_1:91117406-91117425 | None:intergenic | 35.0% | |
GAGTGGAATACGATTGAAAT+AGG | + | chr3_1:91117563-91117582 | None:intergenic | 35.0% | |
GACACTACTACCTTACAATT+AGG | - | chr3_1:91117807-91117826 | Msa0387210:intron | 35.0% | |
ATTCAACATCAACCGTAAAG+AGG | - | chr3_1:91118186-91118205 | Msa0387210:intron | 35.0% | |
TTCAACATCAACCGTAAAGA+GGG | - | chr3_1:91118187-91118206 | Msa0387210:intron | 35.0% | |
! | ACATTTTCTGTAGATTGCAG+TGG | - | chr3_1:91118235-91118254 | Msa0387210:intron | 35.0% |
GGCATGAAAAAACCTTATCT+TGG | - | chr3_1:91118299-91118318 | Msa0387210:intron | 35.0% | |
!! | TGGTAACTTGTTTGCAAATG+AGG | + | chr3_1:91118350-91118369 | None:intergenic | 35.0% |
!! | AGTTGATAGCATTTGCCAAT+AGG | + | chr3_1:91118474-91118493 | None:intergenic | 35.0% |
TCTCTTCCAAAAGAAGATAG+AGG | + | chr3_1:91118802-91118821 | None:intergenic | 35.0% | |
! | TCTCATCATTATTGCTGTTG+GGG | + | chr3_1:91118861-91118880 | None:intergenic | 35.0% |
GTTCTCATCATTATTGCTGT+TGG | + | chr3_1:91118863-91118882 | None:intergenic | 35.0% | |
TGATATGGAACATGAATCAG+AGG | + | chr3_1:91118954-91118973 | None:intergenic | 35.0% | |
! | TTTTTACTTCCTCAAGACAC+TGG | - | chr3_1:91118983-91119002 | Msa0387210:intron | 35.0% |
AAAGCCAAATTCAAGAACCT+CGG | - | chr3_1:91119083-91119102 | Msa0387210:intron | 35.0% | |
AGCACCTATAGTAGAAAAGA+TGG | - | chr3_1:91119315-91119334 | Msa0387210:intron | 35.0% | |
AGATGGTAGAAAATAGGCTT+AGG | - | chr3_1:91119332-91119351 | Msa0387210:intron | 35.0% | |
!! | GAAAATAGGCTTAGGTTGAT+TGG | - | chr3_1:91119340-91119359 | Msa0387210:intron | 35.0% |
AGTCAAATCAAAAGAGGTAG+AGG | - | chr3_1:91119421-91119440 | Msa0387210:intron | 35.0% | |
ACAAGAGAAACTATTGTGGA+AGG | - | chr3_1:91119460-91119479 | Msa0387210:intron | 35.0% | |
AACTATTGTGGAAGGTTTAG+AGG | - | chr3_1:91119468-91119487 | Msa0387210:intron | 35.0% | |
GGTTTAGAGGTTTAATGAGT+TGG | - | chr3_1:91119481-91119500 | Msa0387210:intron | 35.0% | |
GAATGCTATCTTCTGAATGA+TGG | - | chr3_1:91119607-91119626 | Msa0387210:intron | 35.0% | |
TTTCCAGCTTAACTTTACCT+AGG | - | chr3_1:91119659-91119678 | Msa0387210:intron | 35.0% | |
CACATGGAAATAGGGAATTT+AGG | + | chr3_1:91119878-91119897 | None:intergenic | 35.0% | |
AATTCCCTATTTCCATGTGT+AGG | - | chr3_1:91119879-91119898 | Msa0387210:intron | 35.0% | |
ATCACCTACACATGGAAATA+GGG | + | chr3_1:91119886-91119905 | None:intergenic | 35.0% | |
AGTTCCTGCTGAAATAATTC+AGG | - | chr3_1:91119972-91119991 | Msa0387210:intron | 35.0% | |
GTGCATTACTTCAGGAAATA+AGG | - | chr3_1:91120047-91120066 | Msa0387210:intron | 35.0% | |
! | AACTCTTTGATTTCACTGCA+TGG | + | chr3_1:91120075-91120094 | None:intergenic | 35.0% |
TAACAGTTCTTCTGGACTAT+GGG | + | chr3_1:91120157-91120176 | None:intergenic | 35.0% | |
ATAACAGTTCTTCTGGACTA+TGG | + | chr3_1:91120158-91120177 | None:intergenic | 35.0% | |
AGAAAGCAGATGATGATTCA+TGG | - | chr3_1:91120265-91120284 | Msa0387210:intron | 35.0% | |
!! | CTAGGAGAGCATCTATAATA+TGG | + | chr3_1:91120293-91120312 | None:intergenic | 35.0% |
ATTATAGATGCTCTCCTAGT+TGG | - | chr3_1:91120294-91120313 | Msa0387210:intron | 35.0% | |
ATGAATTTACGTTGCCAACT+AGG | + | chr3_1:91120311-91120330 | None:intergenic | 35.0% | |
TATAATCCCTTGCTCTTTCT+TGG | + | chr3_1:91120439-91120458 | None:intergenic | 35.0% | |
GGGATTATACACATAGTTTC+TGG | - | chr3_1:91120450-91120469 | Msa0387210:intron | 35.0% | |
ATTTCCGTGATATCAATGGA+TGG | - | chr3_1:91120526-91120545 | Msa0387210:intron | 35.0% | |
TGATAGCAAACAATGCTTCA+AGG | - | chr3_1:91120606-91120625 | Msa0387210:intron | 35.0% | |
! | ATATGTACTTCCTTTTCCCA+AGG | + | chr3_1:91120682-91120701 | None:intergenic | 35.0% |
AGACCAGATTCAGTCATAAA+GGG | - | chr3_1:91121037-91121056 | Msa0387210:intron | 35.0% | |
GGAACACAGCTAATTCTTAA+AGG | + | chr3_1:91121099-91121118 | None:intergenic | 35.0% | |
ATTCCATGGTAGGGAAAAAA+TGG | - | chr3_1:91121163-91121182 | Msa0387210:intron | 35.0% | |
TAAAACTGCTGCATCTATTG+CGG | - | chr3_1:91121256-91121275 | Msa0387210:intron | 35.0% | |
! | TTCACACTTTTCCAATGTGA+GGG | + | chr3_1:91121348-91121367 | None:intergenic | 35.0% |
TCAAGCTCAGAAGAATCTTT+AGG | + | chr3_1:91121374-91121393 | None:intergenic | 35.0% | |
GGATTCACTAAGAAATACCT+TGG | - | chr3_1:91121451-91121470 | Msa0387210:intron | 35.0% | |
!! | GTTTTCTGAAAGAATGTGCA+CGG | + | chr3_1:91121526-91121545 | None:intergenic | 35.0% |
GTGCACATTCTTTCAGAAAA+CGG | - | chr3_1:91121525-91121544 | Msa0387210:intron | 35.0% | |
ACATTCTTTCAGAAAACGGA+TGG | - | chr3_1:91121529-91121548 | Msa0387210:intron | 35.0% | |
ATATCCATTTAGACAAGTGG+TGG | + | chr3_1:91121570-91121589 | None:intergenic | 35.0% | |
GACATATCCATTTAGACAAG+TGG | + | chr3_1:91121573-91121592 | None:intergenic | 35.0% | |
TGTCTAAATGGATATGTCAC+CGG | - | chr3_1:91121575-91121594 | Msa0387210:CDS | 35.0% | |
TTCAGAAGAAATATAGAGGC+TGG | - | chr3_1:91121660-91121679 | Msa0387210:CDS | 35.0% | |
! | CCTGTATCGTTACAACTTTT+TGG | + | chr3_1:91121715-91121734 | None:intergenic | 35.0% |
CCAAAAAGTTGTAACGATAC+AGG | - | chr3_1:91121712-91121731 | Msa0387210:CDS | 35.0% | |
!! | TTGTTTCTAGAAGAGAGAGA+TGG | - | chr3_1:91121813-91121832 | Msa0387210:CDS | 35.0% |
AGTAAAAATGGTGCATGCAT+AGG | - | chr3_1:91121862-91121881 | Msa0387210:CDS | 35.0% | |
ATTAAGTTCTTGTTGAGGCT+TGG | + | chr3_1:91121888-91121907 | None:intergenic | 35.0% | |
! | TTTTATGTGTTTGTTTGGGC+AGG | - | chr3_1:91121921-91121940 | Msa0387210:intron | 35.0% |
GGCAATACAAGCTAATGATA+TGG | - | chr3_1:91121971-91121990 | Msa0387210:intron | 35.0% | |
!! | AAGATTTTCTCAAGGTGTTC+AGG | - | chr3_1:91122097-91122116 | Msa0387210:intron | 35.0% |
AGTACATGCAGCAATTCAAA+AGG | - | chr3_1:91122128-91122147 | Msa0387210:intron | 35.0% | |
ATCAGTATAATCGCATGCTT+GGG | - | chr3_1:91122196-91122215 | Msa0387210:intron | 35.0% | |
! | AGATGTTAGCCTATATACCT+CGG | + | chr3_1:91122235-91122254 | None:intergenic | 35.0% |
AGGTATATAGGCTAACATCT+TGG | - | chr3_1:91122235-91122254 | Msa0387210:intron | 35.0% | |
ATTATCCTCGTGAAGTAATC+AGG | - | chr3_1:91122491-91122510 | Msa0387210:intron | 35.0% | |
TAATTCCTGATTACTTCACG+AGG | + | chr3_1:91122499-91122518 | None:intergenic | 35.0% | |
!! | CTTGGAATATTGATGATGCT+TGG | - | chr3_1:91122662-91122681 | Msa0387210:intron | 35.0% |
! | TGTAGCTTGTAAATCAGTCT+AGG | - | chr3_1:91122824-91122843 | Msa0387210:intron | 35.0% |
GTACATAGTGATAAAGGTGA+TGG | - | chr3_1:91122849-91122868 | Msa0387210:intron | 35.0% | |
CTAAACTGCTACTATGCACA+TGG | - | chr3_1:91113240-91113259 | Msa0387210:three_prime_UTR | 40.0% | |
! | TCTTGTGCTATTGTCTTGAC+AGG | - | chr3_1:91113623-91113642 | Msa0387210:intron | 40.0% |
! | CTTGTGCTATTGTCTTGACA+GGG | - | chr3_1:91113624-91113643 | Msa0387210:intron | 40.0% |
!! | ATGTACTCTTTTTCTGGTCG+GGG | - | chr3_1:91114059-91114078 | Msa0387210:CDS | 40.0% |
AACGGTATCCAAAGAGAATC+TGG | + | chr3_1:91114147-91114166 | None:intergenic | 40.0% | |
TTACATTCCCTCCTGTGAAT+TGG | - | chr3_1:91114245-91114264 | Msa0387210:CDS | 40.0% | |
CAGATATACCAATTCACAGG+AGG | + | chr3_1:91114256-91114275 | None:intergenic | 40.0% | |
GCACAGATATACCAATTCAC+AGG | + | chr3_1:91114259-91114278 | None:intergenic | 40.0% | |
CAACTATGGATGTTGTCTCA+GGG | + | chr3_1:91114404-91114423 | None:intergenic | 40.0% | |
GGACTGGAGAAATTCTGATT+AGG | + | chr3_1:91114441-91114460 | None:intergenic | 40.0% | |
AATCAGAATTTCTCCAGTCC+TGG | - | chr3_1:91114441-91114460 | Msa0387210:intron | 40.0% | |
ATCAGAATTTCTCCAGTCCT+GGG | - | chr3_1:91114442-91114461 | Msa0387210:intron | 40.0% | |
!!! | AATAGGTTTTTTGGGGGTTG+GGG | - | chr3_1:91114716-91114735 | Msa0387210:CDS | 40.0% |
AACATAGAAGGGAAGCTACT+AGG | - | chr3_1:91114944-91114963 | Msa0387210:CDS | 40.0% | |
ACATAGAAGGGAAGCTACTA+GGG | - | chr3_1:91114945-91114964 | Msa0387210:CDS | 40.0% | |
ATAGACGGGAAAAGTTGACT+TGG | - | chr3_1:91115204-91115223 | Msa0387210:intron | 40.0% | |
!! | GAAAAGTTGACTTGGAGACT+AGG | - | chr3_1:91115212-91115231 | Msa0387210:intron | 40.0% |
CAAAAGAAGAGGGTGATGAT+AGG | - | chr3_1:91115334-91115353 | Msa0387210:intron | 40.0% | |
CCTCTTGCAATTACTTGGTA+AGG | + | chr3_1:91115820-91115839 | None:intergenic | 40.0% | |
CCTTACCAAGTAATTGCAAG+AGG | - | chr3_1:91115817-91115836 | Msa0387210:CDS | 40.0% | |
! | TTTTCCCCTTGGTTATGTGA+AGG | + | chr3_1:91115913-91115932 | None:intergenic | 40.0% |
!!! | TTAAGCCCTTTTTTTCCCCT+TGG | + | chr3_1:91115924-91115943 | None:intergenic | 40.0% |
ACTAACGGAGAAGGAGTTAA+GGG | + | chr3_1:91116020-91116039 | None:intergenic | 40.0% | |
TAGACAGATGCTAACCTAGA+GGG | + | chr3_1:91116227-91116246 | None:intergenic | 40.0% | |
ATAGACAGATGCTAACCTAG+AGG | + | chr3_1:91116228-91116247 | None:intergenic | 40.0% | |
TCTTGTTCAAAAGCGAGCAA+TGG | - | chr3_1:91116485-91116504 | Msa0387210:intron | 40.0% | |
CTACCGTGAATCTTGAAAGT+AGG | + | chr3_1:91116582-91116601 | None:intergenic | 40.0% | |
ACTTTCAAGATTCACGGTAG+TGG | - | chr3_1:91116582-91116601 | Msa0387210:intron | 40.0% | |
! | ATTTAAGACAACCTTAGGGG+AGG | - | chr3_1:91116995-91117014 | Msa0387210:intron | 40.0% |
CTTCACTTTCCTCCATTTCT+TGG | - | chr3_1:91117275-91117294 | Msa0387210:intron | 40.0% | |
TTATTAACACGCGGCATAAC+AGG | + | chr3_1:91117625-91117644 | None:intergenic | 40.0% | |
TGCCGCGTGTTAATAACTTA+AGG | - | chr3_1:91117629-91117648 | Msa0387210:intron | 40.0% | |
AACTCCTCCATTAGTCACTT+TGG | + | chr3_1:91117683-91117702 | None:intergenic | 40.0% | |
AGTGACTAATGGAGGAGTTA+AGG | - | chr3_1:91117684-91117703 | Msa0387210:intron | 40.0% | |
GTGACTAATGGAGGAGTTAA+GGG | - | chr3_1:91117685-91117704 | Msa0387210:intron | 40.0% | |
ATCAACCGTAAAGAGGGTAA+AGG | - | chr3_1:91118193-91118212 | Msa0387210:intron | 40.0% | |
CTTGTTTGCAAATGAGGACT+TGG | + | chr3_1:91118344-91118363 | None:intergenic | 40.0% | |
ACCAAAACAACACGCATACA+AGG | - | chr3_1:91118366-91118385 | Msa0387210:intron | 40.0% | |
!!! | TCCTTGTATGCGTGTTGTTT+TGG | + | chr3_1:91118370-91118389 | None:intergenic | 40.0% |
TATCAACTCAAGTGCCCTAA+GGG | - | chr3_1:91118486-91118505 | Msa0387210:intron | 40.0% | |
TTCCATAACATGTGCCCTTA+GGG | + | chr3_1:91118503-91118522 | None:intergenic | 40.0% | |
TTCCTTAACATGTGCCCTTA+TGG | - | chr3_1:91118625-91118644 | Msa0387210:intron | 40.0% | |
TAAGTTAGGGTCTTGCTAAC+AGG | + | chr3_1:91118653-91118672 | None:intergenic | 40.0% | |
! | GAAACGCCTCTATCTTCTTT+TGG | - | chr3_1:91118793-91118812 | Msa0387210:intron | 40.0% |
AAGAGAAATGATTGCCAACC+AGG | - | chr3_1:91118816-91118835 | Msa0387210:intron | 40.0% | |
TATGGAACATGAATCAGAGG+TGG | + | chr3_1:91118951-91118970 | None:intergenic | 40.0% | |
! | GAGGTTCTTGAATTTGGCTT+TGG | + | chr3_1:91119084-91119103 | None:intergenic | 40.0% |
AAGCCAAATTCAAGAACCTC+GGG | - | chr3_1:91119084-91119103 | Msa0387210:intron | 40.0% | |
GCATATTCAAGCTTGACTGT+TGG | - | chr3_1:91119109-91119128 | Msa0387210:intron | 40.0% | |
TTATGCCAATGAGGCAACAA+AGG | - | chr3_1:91119177-91119196 | Msa0387210:intron | 40.0% | |
GTACGTTAGTGAATGCTAGA+CGG | - | chr3_1:91119255-91119274 | Msa0387210:intron | 40.0% | |
TACGTTAGTGAATGCTAGAC+GGG | - | chr3_1:91119256-91119275 | Msa0387210:intron | 40.0% | |
AGTACGAAGAGTAGATCAGA+TGG | - | chr3_1:91119393-91119412 | Msa0387210:intron | 40.0% | |
GAGGAGAGTCAAATCAAAAG+AGG | - | chr3_1:91119415-91119434 | Msa0387210:intron | 40.0% | |
GAACCTAGGTAAAGTTAAGC+TGG | + | chr3_1:91119665-91119684 | None:intergenic | 40.0% | |
AGATGCTATTGCTACTGATG+CGG | - | chr3_1:91119838-91119857 | Msa0387210:intron | 40.0% | |
GATCACCTACACATGGAAAT+AGG | + | chr3_1:91119887-91119906 | None:intergenic | 40.0% | |
CAACAATGATCACCTACACA+TGG | + | chr3_1:91119894-91119913 | None:intergenic | 40.0% | |
CATGTGTAGGTGATCATTGT+TGG | - | chr3_1:91119892-91119911 | Msa0387210:intron | 40.0% | |
CCATCCTGAATTATTTCAGC+AGG | + | chr3_1:91119979-91119998 | None:intergenic | 40.0% | |
CCTGCTGAAATAATTCAGGA+TGG | - | chr3_1:91119976-91119995 | Msa0387210:intron | 40.0% | |
AGCAACCTTTCCAAGAAGAT+GGG | + | chr3_1:91120025-91120044 | None:intergenic | 40.0% | |
CCTTTATAATCGAAGCAGAG+AGG | + | chr3_1:91120206-91120225 | None:intergenic | 40.0% | |
CCTCTCTGCTTCGATTATAA+AGG | - | chr3_1:91120203-91120222 | Msa0387210:intron | 40.0% | |
AAGGATGATAGCTCAGAATC+TGG | - | chr3_1:91120222-91120241 | Msa0387210:intron | 40.0% | |
GTTGGCAACGTAAATTCATC+TGG | - | chr3_1:91120312-91120331 | Msa0387210:intron | 40.0% | |
TGCATCTTCATCTCGTTCAT+TGG | + | chr3_1:91120403-91120422 | None:intergenic | 40.0% | |
AATGAACGAGATGAAGATGC+AGG | - | chr3_1:91120402-91120421 | Msa0387210:intron | 40.0% | |
TCTTTGTCCAAGAAAGAGCA+AGG | - | chr3_1:91120429-91120448 | Msa0387210:intron | 40.0% | |
CTTTGTCCAAGAAAGAGCAA+GGG | - | chr3_1:91120430-91120449 | Msa0387210:intron | 40.0% | |
TTCATGCCACAACTGAGAAT+GGG | + | chr3_1:91120501-91120520 | None:intergenic | 40.0% | |
ATTCATGCCACAACTGAGAA+TGG | + | chr3_1:91120502-91120521 | None:intergenic | 40.0% | |
CAGTCCATCCATTGATATCA+CGG | + | chr3_1:91120533-91120552 | None:intergenic | 40.0% | |
ACATATACAAGGAGAGAGCA+CGG | - | chr3_1:91120696-91120715 | Msa0387210:intron | 40.0% | |
CATGTCAGAAATTAACGAGC+AGG | - | chr3_1:91120821-91120840 | Msa0387210:intron | 40.0% | |
GTCAAAAACAAGTTTGGGGA+AGG | - | chr3_1:91120882-91120901 | Msa0387210:intron | 40.0% | |
TGATGTGAGAAGACCAATCT+AGG | + | chr3_1:91121005-91121024 | None:intergenic | 40.0% | |
CAGACCAGATTCAGTCATAA+AGG | - | chr3_1:91121036-91121055 | Msa0387210:intron | 40.0% | |
TCACCCTTTATGACTGAATC+TGG | + | chr3_1:91121043-91121062 | None:intergenic | 40.0% | |
!!! | CAACCATTTTTTCCCTACCA+TGG | + | chr3_1:91121169-91121188 | None:intergenic | 40.0% |
CCATTTGGATCTTGTGAACT+TGG | + | chr3_1:91121236-91121255 | None:intergenic | 40.0% | |
CCAAGTTCACAAGATCCAAA+TGG | - | chr3_1:91121233-91121252 | Msa0387210:intron | 40.0% | |
! | GATGCAGCAGTTTTACCATT+TGG | + | chr3_1:91121251-91121270 | None:intergenic | 40.0% |
! | CTTCACACTTTTCCAATGTG+AGG | + | chr3_1:91121349-91121368 | None:intergenic | 40.0% |
TAGTGAATCCTCATCATCAC+TGG | + | chr3_1:91121441-91121460 | None:intergenic | 40.0% | |
!! | AATGGATATGTCACCGGTTT+AGG | - | chr3_1:91121581-91121600 | Msa0387210:CDS | 40.0% |
AAGCTAATGATATGGGCAGT+TGG | - | chr3_1:91121979-91121998 | Msa0387210:intron | 40.0% | |
TGCAGCAATTCAAAAGGCTT+TGG | - | chr3_1:91122134-91122153 | Msa0387210:intron | 40.0% | |
! | CAATTCAAAAGGCTTTGGCA+CGG | - | chr3_1:91122139-91122158 | Msa0387210:intron | 40.0% |
! | AATTCAAAAGGCTTTGGCAC+GGG | - | chr3_1:91122140-91122159 | Msa0387210:intron | 40.0% |
CATCAGTATAATCGCATGCT+TGG | - | chr3_1:91122195-91122214 | Msa0387210:intron | 40.0% | |
!!! | TTACGCCCACTTTTTGCTTT+CGG | - | chr3_1:91122267-91122286 | Msa0387210:intron | 40.0% |
ATGTTCAGCCTGTAAGAGAA+TGG | + | chr3_1:91122590-91122609 | None:intergenic | 40.0% | |
ATTCTCTTACAGGCTGAACA+TGG | - | chr3_1:91122589-91122608 | Msa0387210:intron | 40.0% | |
CGAGTGATGAAATGGAAACA+CGG | - | chr3_1:91122617-91122636 | Msa0387210:intron | 40.0% | |
AACACGGTTATCAACTTCTG+TGG | - | chr3_1:91122633-91122652 | Msa0387210:intron | 40.0% | |
! | AAATGGCCTTGAATGCATGT+TGG | - | chr3_1:91122897-91122916 | Msa0387210:intron | 40.0% |
CTCTATCCAACATGCATTCA+AGG | + | chr3_1:91122906-91122925 | None:intergenic | 40.0% | |
GGATAGAGTTTCAAAGTCAG+TGG | - | chr3_1:91122918-91122937 | Msa0387210:intron | 40.0% | |
CTACACACAAAATGAGAGGA+AGG | + | chr3_1:91122990-91123009 | None:intergenic | 40.0% | |
GCAACTACACACAAAATGAG+AGG | + | chr3_1:91122994-91123013 | None:intergenic | 40.0% | |
! | AACTTCGCCTCTGGAAACTA+CGG | + | chr3_1:91113275-91113294 | None:intergenic | 45.0% |
GTTTCCAGAGGCGAAGTTAT+TGG | - | chr3_1:91113277-91113296 | Msa0387210:three_prime_UTR | 45.0% | |
ACATCCAATAACTTCGCCTC+TGG | + | chr3_1:91113284-91113303 | None:intergenic | 45.0% | |
GAAGTGTGAAAACTGGGGAT+AGG | - | chr3_1:91113742-91113761 | Msa0387210:intron | 45.0% | |
GAGTCCCATTTGCACAACAT+GGG | - | chr3_1:91113764-91113783 | Msa0387210:intron | 45.0% | |
TGAGCCCATGTTGTGCAAAT+GGG | + | chr3_1:91113771-91113790 | None:intergenic | 45.0% | |
TTGGCATGCAACATGTAGAC+AGG | + | chr3_1:91114109-91114128 | None:intergenic | 45.0% | |
TCTCTTTGGATACCGTTCTG+TGG | - | chr3_1:91114150-91114169 | Msa0387210:CDS | 45.0% | |
AATCACAGTCCTCCACAGAA+CGG | + | chr3_1:91114165-91114184 | None:intergenic | 45.0% | |
GGATGTCCCCTGTAACATAT+GGG | + | chr3_1:91114316-91114335 | None:intergenic | 45.0% | |
TGGATGTCCCCTGTAACATA+TGG | + | chr3_1:91114317-91114336 | None:intergenic | 45.0% | |
TTACAGGGGACATCCAATTC+TGG | - | chr3_1:91114321-91114340 | Msa0387210:intron | 45.0% | |
TTGTCTGACAGGACCAGAAT+TGG | + | chr3_1:91114337-91114356 | None:intergenic | 45.0% | |
AACGGTGATGATTGTCTGAC+AGG | + | chr3_1:91114348-91114367 | None:intergenic | 45.0% | |
GAGCTACGACTCTGACTAAA+CGG | + | chr3_1:91114366-91114385 | None:intergenic | 45.0% | |
ATGGATGTTGTCTCAGGGTT+TGG | + | chr3_1:91114399-91114418 | None:intergenic | 45.0% | |
CCAACTATGGATGTTGTCTC+AGG | + | chr3_1:91114405-91114424 | None:intergenic | 45.0% | |
CCTGAGACAACATCCATAGT+TGG | - | chr3_1:91114402-91114421 | Msa0387210:intron | 45.0% | |
!!! | ATAGGTTTTTTGGGGGTTGG+GGG | - | chr3_1:91114717-91114736 | Msa0387210:CDS | 45.0% |
GCAACATGCAGGTCTACTTT+AGG | + | chr3_1:91114834-91114853 | None:intergenic | 45.0% | |
!! | GGTTGGTAAGGAAACTGAGT+TGG | - | chr3_1:91114966-91114985 | Msa0387210:CDS | 45.0% |
ACCAAAGAAGAGGGTGATGA+TGG | - | chr3_1:91115169-91115188 | Msa0387210:intron | 45.0% | |
TCCATCATCACCCTCTTCTT+TGG | + | chr3_1:91115173-91115192 | None:intergenic | 45.0% | |
! | TGACTTGGAGACTAGGATGT+TGG | - | chr3_1:91115219-91115238 | Msa0387210:intron | 45.0% |
GACTTGGAGACTAGGATGTT+GGG | - | chr3_1:91115220-91115239 | Msa0387210:intron | 45.0% | |
TTGCTATGGTAGGATCTCTG+TGG | + | chr3_1:91115753-91115772 | None:intergenic | 45.0% | |
ATCCTACCATAGCAAAGTCC+AGG | - | chr3_1:91115758-91115777 | Msa0387210:CDS | 45.0% | |
! | TTCCTGGACTTTGCTATGGT+AGG | + | chr3_1:91115763-91115782 | None:intergenic | 45.0% |
! | CGTTTTCCTGGACTTTGCTA+TGG | + | chr3_1:91115767-91115786 | None:intergenic | 45.0% |
AGCAAAGTCCAGGAAAACGT+TGG | - | chr3_1:91115768-91115787 | Msa0387210:CDS | 45.0% | |
GCAAAGTCCAGGAAAACGTT+GGG | - | chr3_1:91115769-91115788 | Msa0387210:CDS | 45.0% | |
! | GGTTATGTGAAGGAGAGCAT+TGG | + | chr3_1:91115903-91115922 | None:intergenic | 45.0% |
TGCTCTCCTTCACATAACCA+AGG | - | chr3_1:91115904-91115923 | Msa0387210:CDS | 45.0% | |
GCTCTCCTTCACATAACCAA+GGG | - | chr3_1:91115905-91115924 | Msa0387210:CDS | 45.0% | |
CTCTCCTTCACATAACCAAG+GGG | - | chr3_1:91115906-91115925 | Msa0387210:CDS | 45.0% | |
GACTAACGGAGAAGGAGTTA+AGG | + | chr3_1:91116021-91116040 | None:intergenic | 45.0% | |
TCCTTCTCCGTTAGTCACTT+TGG | - | chr3_1:91116025-91116044 | Msa0387210:CDS | 45.0% | |
ACCAAAGTGACTAACGGAGA+AGG | + | chr3_1:91116029-91116048 | None:intergenic | 45.0% | |
GAAGGGACCAAAGTGACTAA+CGG | + | chr3_1:91117673-91117692 | None:intergenic | 45.0% | |
GTTTGGAAACGTGGCATAAC+AGG | - | chr3_1:91116076-91116095 | Msa0387210:CDS | 45.0% | |
AGACAGATGCTAACCTAGAG+GGG | + | chr3_1:91116226-91116245 | None:intergenic | 45.0% | |
! | ATGGTGTTAAGATGGAAGGG+AGG | - | chr3_1:91116902-91116921 | Msa0387210:intron | 45.0% |
GAAGGGACCAAAGTGACTAA+TGG | - | chr3_1:91117673-91117692 | Msa0387210:intron | 45.0% | |
ATCACTCCAATGTGAACTCG+AGG | - | chr3_1:91117845-91117864 | Msa0387210:CDS | 45.0% | |
TCACTCCAATGTGAACTCGA+GGG | - | chr3_1:91117846-91117865 | Msa0387210:CDS | 45.0% | |
!!! | AGGTTTTTTCATGCCCAGCA+GGG | + | chr3_1:91118294-91118313 | None:intergenic | 45.0% |
!!! | AAGGTTTTTTCATGCCCAGC+AGG | + | chr3_1:91118295-91118314 | None:intergenic | 45.0% |
CAGCATCTCTGTCCAAGATA+AGG | + | chr3_1:91118314-91118333 | None:intergenic | 45.0% | |
CTTATCTTGGACAGAGATGC+TGG | - | chr3_1:91118312-91118331 | Msa0387210:intron | 45.0% | |
CTATCAACTCAAGTGCCCTA+AGG | - | chr3_1:91118485-91118504 | Msa0387210:intron | 45.0% | |
GTTCCATAACATGTGCCCTT+AGG | + | chr3_1:91118504-91118523 | None:intergenic | 45.0% | |
! | TGCCATAAGGGCACATGTTA+AGG | + | chr3_1:91118630-91118649 | None:intergenic | 45.0% |
! | CTTGCTAACAGGTGCCATAA+GGG | + | chr3_1:91118642-91118661 | None:intergenic | 45.0% |
! | TCTTGCTAACAGGTGCCATA+AGG | + | chr3_1:91118643-91118662 | None:intergenic | 45.0% |
! | TATTGCTGTTGGGGTGTATC+CGG | + | chr3_1:91118852-91118871 | None:intergenic | 45.0% |
TTACTTCCTCAAGACACTGG+TGG | - | chr3_1:91118986-91119005 | Msa0387210:intron | 45.0% | |
CATCCCGAGGTTCTTGAATT+TGG | + | chr3_1:91119090-91119109 | None:intergenic | 45.0% | |
AAGCTTGAATATGCATCCCG+AGG | + | chr3_1:91119103-91119122 | None:intergenic | 45.0% | |
GTGAACCTTTGTTGCCTCAT+TGG | + | chr3_1:91119185-91119204 | None:intergenic | 45.0% | |
TAGTGAATGCTAGACGGGAT+AGG | - | chr3_1:91119261-91119280 | Msa0387210:intron | 45.0% | |
ATGCTAGACGGGATAGGATT+AGG | - | chr3_1:91119267-91119286 | Msa0387210:intron | 45.0% | |
!! | ATGACACCATTAGAGCGTTG+AGG | - | chr3_1:91119291-91119310 | Msa0387210:intron | 45.0% |
ACGAAGAGTAGATCAGATGG+AGG | - | chr3_1:91119396-91119415 | Msa0387210:intron | 45.0% | |
AAGCCTCATCCTACTTAGTG+GGG | + | chr3_1:91119567-91119586 | None:intergenic | 45.0% | |
CAAGCCTCATCCTACTTAGT+GGG | + | chr3_1:91119568-91119587 | None:intergenic | 45.0% | |
TGCATGCACTTCATGAACCT+AGG | + | chr3_1:91119679-91119698 | None:intergenic | 45.0% | |
TCTACCTGGGCTTGTATGTT+TGG | - | chr3_1:91119940-91119959 | Msa0387210:intron | 45.0% | |
ACCTTTCCAAGAAGATGGGA+CGG | + | chr3_1:91120021-91120040 | None:intergenic | 45.0% | |
GAGCAACCTTTCCAAGAAGA+TGG | + | chr3_1:91120026-91120045 | None:intergenic | 45.0% | |
GTTGCTCTGTGCATTACTTC+AGG | - | chr3_1:91120039-91120058 | Msa0387210:intron | 45.0% | |
GATGATAGCTCAGAATCTGG+AGG | - | chr3_1:91120225-91120244 | Msa0387210:intron | 45.0% | |
TCTTCTTCAAGAGCTGCTGA+AGG | - | chr3_1:91120347-91120366 | Msa0387210:intron | 45.0% | |
! | TTTCTGGATTGGGTTTCGAG+TGG | - | chr3_1:91120466-91120485 | Msa0387210:intron | 45.0% |
! | TTCTGGATTGGGTTTCGAGT+GGG | - | chr3_1:91120467-91120486 | Msa0387210:intron | 45.0% |
ACAACTGAGAATGGGGTTCA+GGG | + | chr3_1:91120493-91120512 | None:intergenic | 45.0% | |
TCATGCCACAACTGAGAATG+GGG | + | chr3_1:91120500-91120519 | None:intergenic | 45.0% | |
! | CATATACAAGGAGAGAGCAC+GGG | - | chr3_1:91120697-91120716 | Msa0387210:intron | 45.0% |
GTTGCTTCACTTATTGCTGC+TGG | - | chr3_1:91121185-91121204 | Msa0387210:intron | 45.0% | |
TCATCTGTCATCCCTCACAT+TGG | - | chr3_1:91121334-91121353 | Msa0387210:intron | 45.0% | |
! | TCTTGAAGCCAGTGATGATG+AGG | - | chr3_1:91121430-91121449 | Msa0387210:intron | 45.0% |
TCCATTTAGACAAGTGGTGG+AGG | + | chr3_1:91121567-91121586 | None:intergenic | 45.0% | |
!! | GTGGCATTGGTGGATATGTT+AGG | - | chr3_1:91121603-91121622 | Msa0387210:CDS | 45.0% |
GATATGGGCAGTTGGAATCT+TGG | - | chr3_1:91121987-91122006 | Msa0387210:intron | 45.0% | |
TCTTGGACAAGGTTGTGCTA+AGG | - | chr3_1:91122004-91122023 | Msa0387210:intron | 45.0% | |
TGTCAATTCGAGAGCTCCTT+TGG | - | chr3_1:91122544-91122563 | Msa0387210:intron | 45.0% | |
TGGCAACACGAGTGATGAAA+TGG | - | chr3_1:91122609-91122628 | Msa0387210:intron | 45.0% | |
CAACTTCTGTGGATGATGCT+TGG | - | chr3_1:91122644-91122663 | Msa0387210:intron | 45.0% | |
!! | ATCTATTATTAAATATATAA+AGG | + | chr3_1:91115416-91115435 | None:intergenic | 5.0% |
!!! | ATATATTGATATAAATTTTT+GGG | + | chr3_1:91117346-91117365 | None:intergenic | 5.0% |
!!! | TATATATTGATATAAATTTT+TGG | + | chr3_1:91117347-91117366 | None:intergenic | 5.0% |
CTGCTACTATGCACATGGAG+AGG | - | chr3_1:91113245-91113264 | Msa0387210:three_prime_UTR | 50.0% | |
AGGAGAACCGTAGTTTCCAG+AGG | - | chr3_1:91113265-91113284 | Msa0387210:three_prime_UTR | 50.0% | |
GGAGTCCCATTTGCACAACA+TGG | - | chr3_1:91113763-91113782 | Msa0387210:intron | 50.0% | |
GTGAGCCCATGTTGTGCAAA+TGG | + | chr3_1:91113772-91113791 | None:intergenic | 50.0% | |
CTTTGGATACCGTTCTGTGG+AGG | - | chr3_1:91114153-91114172 | Msa0387210:CDS | 50.0% | |
TGGGTTCTTAGAGGTCACCT+CGG | - | chr3_1:91114461-91114480 | Msa0387210:intron | 50.0% | |
! | TCTGGTTCAGCGAATGCAAC+AGG | + | chr3_1:91114624-91114643 | None:intergenic | 50.0% |
AGAAGGGAAGCTACTAGGGT+TGG | - | chr3_1:91114949-91114968 | Msa0387210:CDS | 50.0% | |
!! | GGAAGCTACTAGGGTTGGTA+AGG | - | chr3_1:91114954-91114973 | Msa0387210:CDS | 50.0% |
ATGAGGGTAAAGGAAGCTGG+TGG | + | chr3_1:91115491-91115510 | None:intergenic | 50.0% | |
GCTATGAGGGTAAAGGAAGC+TGG | + | chr3_1:91115494-91115513 | None:intergenic | 50.0% | |
CTCAGACAGCTTAGACAAGC+AGG | + | chr3_1:91115561-91115580 | None:intergenic | 50.0% | |
CTGCTTGTCTAAGCTGTCTG+AGG | - | chr3_1:91115559-91115578 | Msa0387210:intron | 50.0% | |
AAAGTCACGAGTTCAAGCCG+TGG | + | chr3_1:91115849-91115868 | None:intergenic | 50.0% | |
!! | GAGAGCATTGGTGCAAAGGT+TGG | + | chr3_1:91115891-91115910 | None:intergenic | 50.0% |
!! | GAAGGAGAGCATTGGTGCAA+AGG | + | chr3_1:91115895-91115914 | None:intergenic | 50.0% |
! | GTCACTTTGGTCCCTTCTGT+TGG | - | chr3_1:91116038-91116057 | Msa0387210:CDS | 50.0% |
TTAACACGCGGCATAACAGG+TGG | + | chr3_1:91117622-91117641 | None:intergenic | 50.0% | |
GGGACCAAAGTGACTAATGG+AGG | - | chr3_1:91117676-91117695 | Msa0387210:intron | 50.0% | |
TTGACCATGATTGCCCTGCT+GGG | - | chr3_1:91118278-91118297 | Msa0387210:intron | 50.0% | |
! | TGCCCTAAGGGCACATGTTA+TGG | - | chr3_1:91118498-91118517 | Msa0387210:intron | 50.0% |
CCAACCAGGAAACCAGTTAC+CGG | - | chr3_1:91118830-91118849 | Msa0387210:intron | 50.0% | |
! | GTATCCGGTAACTGGTTTCC+TGG | + | chr3_1:91118837-91118856 | None:intergenic | 50.0% |
GTGCTACCTCAACGCTCTAA+TGG | + | chr3_1:91119300-91119319 | None:intergenic | 50.0% | |
ACTTAGTGGGGTCGACTACA+TGG | + | chr3_1:91119555-91119574 | None:intergenic | 50.0% | |
TGTAGTCGACCCCACTAAGT+AGG | - | chr3_1:91119555-91119574 | Msa0387210:intron | 50.0% | |
CCAAGCCTCATCCTACTTAG+TGG | + | chr3_1:91119569-91119588 | None:intergenic | 50.0% | |
CCACTAAGTAGGATGAGGCT+TGG | - | chr3_1:91119566-91119585 | Msa0387210:intron | 50.0% | |
GTCACCAAACATACAAGCCC+AGG | + | chr3_1:91119947-91119966 | None:intergenic | 50.0% | |
GGATGGCGTAATCTGTTGTG+AGG | - | chr3_1:91119993-91120012 | Msa0387210:intron | 50.0% | |
TCCGTCCCATCTTCTTGGAA+AGG | - | chr3_1:91120017-91120036 | Msa0387210:intron | 50.0% | |
AGCTGCTGAAGGATAAGCTG+CGG | - | chr3_1:91120358-91120377 | Msa0387210:intron | 50.0% | |
CACAACTGAGAATGGGGTTC+AGG | + | chr3_1:91120494-91120513 | None:intergenic | 50.0% | |
CTGAACCCCATTCTCAGTTG+TGG | - | chr3_1:91120492-91120511 | Msa0387210:intron | 50.0% | |
!! | ATGGATGGACTGCCCTTCAT+TGG | - | chr3_1:91120541-91120560 | Msa0387210:intron | 50.0% |
!! | TGGATGGACTGCCCTTCATT+GGG | - | chr3_1:91120542-91120561 | Msa0387210:intron | 50.0% |
AAACCGTGCAGCCCAATGAA+GGG | + | chr3_1:91120556-91120575 | None:intergenic | 50.0% | |
CATCTATTGCGGCCAGCAAT+GGG | - | chr3_1:91121267-91121286 | Msa0387210:intron | 50.0% | |
TGCATTTCTGACAGCACCCA+AGG | + | chr3_1:91121471-91121490 | None:intergenic | 50.0% | |
TGCTGTCAGAAATGCAGCTC+AGG | - | chr3_1:91121475-91121494 | Msa0387210:intron | 50.0% | |
GCCTCCACCACTTGTCTAAA+TGG | - | chr3_1:91121563-91121582 | Msa0387210:CDS | 50.0% | |
!! | GGATATGTCACCGGTTTAGG+TGG | - | chr3_1:91121584-91121603 | Msa0387210:CDS | 50.0% |
TCCACCAATGCCACCTAAAC+CGG | + | chr3_1:91121597-91121616 | None:intergenic | 50.0% | |
ATGTGAGGGGTTACCAGACT+CGG | - | chr3_1:91121947-91121966 | Msa0387210:intron | 50.0% | |
GGCAGTTGGAATCTTGGACA+AGG | - | chr3_1:91121993-91122012 | Msa0387210:intron | 50.0% | |
TGGACAAGGTTGTGCTAAGG+TGG | - | chr3_1:91122007-91122026 | Msa0387210:intron | 50.0% | |
ACAAGGTTGTGCTAAGGTGG+CGG | - | chr3_1:91122010-91122029 | Msa0387210:intron | 50.0% | |
!! | TGCTAAGGTGGCGGAGAAAA+CGG | - | chr3_1:91122019-91122038 | Msa0387210:intron | 50.0% |
TTTGGCACGGGTGATTTCCA+TGG | - | chr3_1:91122152-91122171 | Msa0387210:intron | 50.0% | |
GATGACGAGCATGCACAGAA+GGG | + | chr3_1:91122179-91122198 | None:intergenic | 50.0% | |
! | TGATGACGAGCATGCACAGA+AGG | + | chr3_1:91122180-91122199 | None:intergenic | 50.0% |
CTCCAGTCCTGGGTTCTTAG+AGG | - | chr3_1:91114452-91114471 | Msa0387210:intron | 55.0% | |
! | GACCTCTAAGAACCCAGGAC+TGG | + | chr3_1:91114457-91114476 | None:intergenic | 55.0% |
! | GAGGTGACCTCTAAGAACCC+AGG | + | chr3_1:91114462-91114481 | None:intergenic | 55.0% |
ACAAGCTCTGCGCCAATTGG+AGG | - | chr3_1:91114533-91114552 | Msa0387210:CDS | 55.0% | |
! | CGGTAGCTTGTGCAACATGC+AGG | + | chr3_1:91114845-91114864 | None:intergenic | 55.0% |
! | CAAGAGGCCCAACGTTTTCC+TGG | + | chr3_1:91115779-91115798 | None:intergenic | 55.0% |
CAAACACTCGCTACCCCTCT+AGG | - | chr3_1:91116210-91116229 | Msa0387210:CDS | 55.0% | |
GGGATCCCTCGAGTTCACAT+TGG | + | chr3_1:91117854-91117873 | None:intergenic | 55.0% | |
CTTGACCATGATTGCCCTGC+TGG | - | chr3_1:91118277-91118296 | Msa0387210:intron | 55.0% | |
! | CCGGTAACTGGTTTCCTGGT+TGG | + | chr3_1:91118833-91118852 | None:intergenic | 55.0% |
GTTGGGGTGTATCCGGTAAC+TGG | + | chr3_1:91118845-91118864 | None:intergenic | 55.0% | |
TGGACTCCACCAGTGTCTTG+AGG | + | chr3_1:91118995-91119014 | None:intergenic | 55.0% | |
CGACCCCACTAAGTAGGATG+AGG | - | chr3_1:91119561-91119580 | Msa0387210:intron | 55.0% | |
ATCCTTTCTCTGCCTCCCCT+CGG | - | chr3_1:91119915-91119934 | Msa0387210:intron | 55.0% | |
AAGCCCAGGTAGAATCCGAG+GGG | + | chr3_1:91119933-91119952 | None:intergenic | 55.0% | |
CAAGCCCAGGTAGAATCCGA+GGG | + | chr3_1:91119934-91119953 | None:intergenic | 55.0% | |
ACAAGCCCAGGTAGAATCCG+AGG | + | chr3_1:91119935-91119954 | None:intergenic | 55.0% | |
TGAAGGATAAGCTGCGGCAC+TGG | - | chr3_1:91120364-91120383 | Msa0387210:intron | 55.0% | |
CAAACCGTGCAGCCCAATGA+AGG | + | chr3_1:91120557-91120576 | None:intergenic | 55.0% | |
CTTCATTGGGCTGCACGGTT+TGG | - | chr3_1:91120555-91120574 | Msa0387210:intron | 55.0% | |
! | ATTGGGCTGCACGGTTTGGA+AGG | - | chr3_1:91120559-91120578 | Msa0387210:intron | 55.0% |
! | TACAAGGAGAGAGCACGGGA+TGG | - | chr3_1:91120701-91120720 | Msa0387210:intron | 55.0% |
ATTGCTGCTGGTGCATCTGC+TGG | - | chr3_1:91121197-91121216 | Msa0387210:intron | 55.0% | |
TGCATCTGCTGGAGCAGTGA+CGG | - | chr3_1:91121208-91121227 | Msa0387210:intron | 55.0% | |
GCATCTATTGCGGCCAGCAA+TGG | - | chr3_1:91121266-91121285 | Msa0387210:intron | 55.0% | |
TCAGGCAGCTGCACGTATAC+AGG | - | chr3_1:91121493-91121512 | Msa0387210:intron | 55.0% | |
!! | GTCACCGGTTTAGGTGGCAT+TGG | - | chr3_1:91121590-91121609 | Msa0387210:CDS | 55.0% |
! | ACCGGTTTAGGTGGCATTGG+TGG | - | chr3_1:91121593-91121612 | Msa0387210:CDS | 55.0% |
TGTTTGGGCAGGCTCATGTG+AGG | - | chr3_1:91121932-91121951 | Msa0387210:intron | 55.0% | |
GTTTGGGCAGGCTCATGTGA+GGG | - | chr3_1:91121933-91121952 | Msa0387210:intron | 55.0% | |
TTTGGGCAGGCTCATGTGAG+GGG | - | chr3_1:91121934-91121953 | Msa0387210:intron | 55.0% | |
GCTTGTATTGCCTCCGAGTC+TGG | + | chr3_1:91121963-91121982 | None:intergenic | 55.0% | |
!! | GCTAAGGTGGCGGAGAAAAC+GGG | - | chr3_1:91122020-91122039 | Msa0387210:intron | 55.0% |
AGCATGCACAGAAGGGACCA+TGG | + | chr3_1:91122172-91122191 | None:intergenic | 55.0% | |
GTCGTCGAGCCGAGGTATAT+AGG | - | chr3_1:91122223-91122242 | Msa0387210:intron | 55.0% | |
CGCACAAGCTCTGCGCCAAT+TGG | - | chr3_1:91114530-91114549 | Msa0387210:CDS | 60.0% | |
AGCTGGTGGCATCTTTGCCC+AGG | + | chr3_1:91115477-91115496 | None:intergenic | 60.0% | |
CATGCCCAGCAGGGCAATCA+TGG | + | chr3_1:91118285-91118304 | None:intergenic | 60.0% | |
ATCCGAGGGGAGGCAGAGAA+AGG | + | chr3_1:91119920-91119939 | None:intergenic | 60.0% | |
CCTCCCCTCGGATTCTACCT+GGG | - | chr3_1:91119927-91119946 | Msa0387210:intron | 60.0% | |
GAGGCTCCGTCCCATCTTCT+TGG | - | chr3_1:91120012-91120031 | Msa0387210:intron | 60.0% | |
CTGCCCTTCATTGGGCTGCA+CGG | - | chr3_1:91120550-91120569 | Msa0387210:intron | 60.0% | |
CAGTCCCTTGTGCCCATTGC+TGG | + | chr3_1:91121282-91121301 | None:intergenic | 60.0% | |
CAGCAATGGGCACAAGGGAC+TGG | - | chr3_1:91121280-91121299 | Msa0387210:intron | 60.0% | |
! | AATGGGCACAAGGGACTGGC+AGG | - | chr3_1:91121284-91121303 | Msa0387210:intron | 60.0% |
TGAGGGGTTACCAGACTCGG+AGG | - | chr3_1:91121950-91121969 | Msa0387210:intron | 60.0% | |
!! | AGGTGGCGGAGAAAACGGGT+TGG | - | chr3_1:91122024-91122043 | Msa0387210:intron | 60.0% |
! | GAAGGCTAGAGCGCTTCCCA+AGG | + | chr3_1:91122718-91122737 | None:intergenic | 60.0% |
!! | GGGAAGCGCTCTAGCCTTCA+TGG | - | chr3_1:91122719-91122738 | Msa0387210:intron | 60.0% |
GCCTCCCCTCGGATTCTACC+TGG | - | chr3_1:91119926-91119945 | Msa0387210:intron | 65.0% | |
CCCAGGTAGAATCCGAGGGG+AGG | + | chr3_1:91119930-91119949 | None:intergenic | 65.0% | |
TGCGGCCAGCAATGGGCACA+AGG | - | chr3_1:91121274-91121293 | Msa0387210:intron | 65.0% | |
GCGGCCAGCAATGGGCACAA+GGG | - | chr3_1:91121275-91121294 | Msa0387210:intron | 65.0% | |
TGGGATGCGTCGTCGAGCCG+AGG | - | chr3_1:91122215-91122234 | Msa0387210:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 91113218 | 91123017 | 91113218 | ID=Msa0387210;Name=Msa0387210 |
chr3_1 | mRNA | 91113218 | 91123017 | 91113218 | ID=Msa0387210-mRNA-1;Parent=Msa0387210;Name=Msa0387210-mRNA-1;_AED=0.10;_eAED=0.10;_QI=82|1|1|1|1|1|10|285|847 |
chr3_1 | exon | 91113218 | 91113634 | 91113218 | ID=Msa0387210-mRNA-1:exon:25343;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91113999 | 91114292 | 91113999 | ID=Msa0387210-mRNA-1:exon:25342;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91114502 | 91115060 | 91114502 | ID=Msa0387210-mRNA-1:exon:25341;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91115655 | 91116334 | 91115655 | ID=Msa0387210-mRNA-1:exon:25340;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91117037 | 91117257 | 91117037 | ID=Msa0387210-mRNA-1:exon:25339;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91117352 | 91117442 | 91117352 | ID=Msa0387210-mRNA-1:exon:25338;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91117836 | 91117987 | 91117836 | ID=Msa0387210-mRNA-1:exon:25337;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91121551 | 91121908 | 91121551 | ID=Msa0387210-mRNA-1:exon:25336;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91122545 | 91122590 | 91122545 | ID=Msa0387210-mRNA-1:exon:25335;Parent=Msa0387210-mRNA-1 |
chr3_1 | exon | 91122925 | 91123017 | 91122925 | ID=Msa0387210-mRNA-1:exon:25334;Parent=Msa0387210-mRNA-1 |
chr3_1 | five_prime_UTR | 91122936 | 91123017 | 91122936 | ID=Msa0387210-mRNA-1:five_prime_utr;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91122925 | 91122935 | 91122925 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91122545 | 91122590 | 91122545 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91121551 | 91121908 | 91121551 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91117836 | 91117987 | 91117836 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91117352 | 91117442 | 91117352 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91117037 | 91117257 | 91117037 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91115655 | 91116334 | 91115655 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91114502 | 91115060 | 91114502 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91113999 | 91114292 | 91113999 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | CDS | 91113503 | 91113634 | 91113503 | ID=Msa0387210-mRNA-1:cds;Parent=Msa0387210-mRNA-1 |
chr3_1 | three_prime_UTR | 91113218 | 91113502 | 91113218 | ID=Msa0387210-mRNA-1:three_prime_utr;Parent=Msa0387210-mRNA-1 |
Gene Sequence |
Protein sequence |