Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387770 | XP_003601529.1 | 99.261 | 541 | 3 | 1 | 1 | 540 | 1 | 541 | 0.0 | 1100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387770 | sp|A7KTC5|PHT11_PETHY | 77.407 | 540 | 116 | 3 | 1 | 540 | 1 | 534 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387770 | B2G3Q0 | 99.261 | 541 | 3 | 1 | 1 | 540 | 1 | 541 | 0.0 | 1100 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0131420 | Msa0387770 | 0.801989 | 6.938702e-49 | -8.615850e-47 |
| Msa0229710 | Msa0387770 | 0.971420 | 3.894893e-133 | -8.615850e-47 |
| Msa0387660 | Msa0387770 | 0.978517 | 5.424618e-146 | -8.615850e-47 |
| Msa0387690 | Msa0387770 | 0.975963 | 6.302100e-141 | -8.615850e-47 |
| Msa0387770 | Msa0936550 | 0.804809 | 1.807857e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387770 | MtrunA17_Chr3g0120761 | 99.261 | 541 | 3 | 1 | 1 | 540 | 1 | 541 | 0.0 | 1100 |
| Msa0387770 | MtrunA17_Chr1g0186821 | 78.399 | 537 | 113 | 2 | 5 | 540 | 4 | 538 | 0.0 | 880 |
| Msa0387770 | MtrunA17_Chr1g0183921 | 76.392 | 521 | 120 | 1 | 1 | 521 | 1 | 518 | 0.0 | 840 |
| Msa0387770 | MtrunA17_Chr1g0167731 | 77.927 | 521 | 114 | 1 | 5 | 524 | 4 | 524 | 0.0 | 830 |
| Msa0387770 | MtrunA17_Chr1g0167741 | 77.778 | 522 | 115 | 1 | 5 | 525 | 4 | 525 | 0.0 | 829 |
| Msa0387770 | MtrunA17_Chr7g0261231 | 74.954 | 539 | 131 | 2 | 1 | 538 | 1 | 536 | 0.0 | 827 |
| Msa0387770 | MtrunA17_Chr1g0167761 | 76.792 | 530 | 120 | 2 | 5 | 533 | 4 | 531 | 0.0 | 826 |
| Msa0387770 | MtrunA17_Chr7g0261241 | 76.394 | 538 | 122 | 1 | 1 | 538 | 1 | 533 | 0.0 | 821 |
| Msa0387770 | MtrunA17_Chr1g0186831 | 74.125 | 514 | 116 | 3 | 1 | 511 | 1 | 500 | 0.0 | 786 |
| Msa0387770 | MtrunA17_Chr1g0183911 | 69.216 | 536 | 162 | 2 | 1 | 536 | 1 | 533 | 0.0 | 775 |
| Msa0387770 | MtrunA17_Chr5g0428481 | 60.036 | 548 | 190 | 6 | 7 | 537 | 6 | 541 | 0.0 | 641 |
| Msa0387770 | MtrunA17_Chr1g0158991 | 59.887 | 531 | 200 | 3 | 6 | 536 | 3 | 520 | 0.0 | 633 |
| Msa0387770 | MtrunA17_Chr4g0043571 | 55.179 | 531 | 214 | 12 | 1 | 526 | 1 | 512 | 0.0 | 533 |
| Msa0387770 | MtrunA17_Chr4g0021771 | 24.503 | 453 | 282 | 15 | 76 | 519 | 104 | 505 | 2.11e-15 | 79.0 |
| Msa0387770 | MtrunA17_Chr1g0213631 | 23.673 | 452 | 250 | 18 | 90 | 515 | 47 | 429 | 7.77e-15 | 77.0 |
| Msa0387770 | MtrunA17_Chr2g0282031 | 23.909 | 481 | 276 | 19 | 76 | 530 | 102 | 518 | 6.61e-14 | 74.3 |
| Msa0387770 | MtrunA17_Chr6g0485661 | 24.708 | 514 | 315 | 20 | 13 | 510 | 45 | 502 | 7.52e-12 | 67.8 |
| Msa0387770 | MtrunA17_Chr7g0214451 | 21.689 | 438 | 281 | 15 | 87 | 515 | 92 | 476 | 1.23e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387770 | AT2G32830.1 | 76.568 | 542 | 125 | 2 | 1 | 540 | 1 | 542 | 0.0 | 864 |
| Msa0387770 | AT3G54700.2 | 78.585 | 523 | 106 | 2 | 1 | 522 | 1 | 518 | 0.0 | 857 |
| Msa0387770 | AT3G54700.1 | 78.585 | 523 | 106 | 2 | 1 | 522 | 1 | 518 | 0.0 | 857 |
| Msa0387770 | AT2G38940.1 | 78.101 | 516 | 113 | 0 | 1 | 516 | 1 | 516 | 0.0 | 856 |
| Msa0387770 | AT5G43350.1 | 76.145 | 524 | 124 | 1 | 1 | 524 | 1 | 523 | 0.0 | 839 |
| Msa0387770 | AT5G43360.1 | 75.862 | 522 | 125 | 1 | 1 | 522 | 1 | 521 | 0.0 | 834 |
| Msa0387770 | AT5G43370.1 | 75.763 | 524 | 126 | 1 | 1 | 524 | 1 | 523 | 0.0 | 804 |
| Msa0387770 | AT5G43370.2 | 75.763 | 524 | 126 | 1 | 1 | 524 | 1 | 523 | 0.0 | 804 |
| Msa0387770 | AT5G43340.1 | 64.650 | 529 | 172 | 3 | 1 | 528 | 1 | 515 | 0.0 | 715 |
| Msa0387770 | AT1G20860.1 | 49.346 | 535 | 253 | 9 | 6 | 533 | 3 | 526 | 1.54e-174 | 503 |
| Msa0387770 | AT1G20860.2 | 49.346 | 535 | 253 | 9 | 6 | 533 | 55 | 578 | 4.12e-174 | 504 |
| Msa0387770 | AT1G76430.1 | 48.956 | 527 | 243 | 11 | 5 | 521 | 3 | 513 | 1.12e-170 | 494 |
| Msa0387770 | AT4G08878.1 | 65.385 | 260 | 88 | 1 | 31 | 290 | 13 | 270 | 5.65e-112 | 334 |
| Msa0387770 | AT4G08895.1 | 50.714 | 140 | 37 | 1 | 321 | 460 | 23 | 130 | 2.18e-43 | 152 |
Find 93 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTGTTTCTTTAGATTT+TGG | 0.112713 | 3_1:+91849733 | Msa0387770:CDS |
| TGGTCTAACTCTTGCTCTTA+TGG | 0.192232 | 3_1:+91849650 | Msa0387770:CDS |
| TATGCAAGGGTTTGGAATTT+TGG | 0.193186 | 3_1:+91849857 | Msa0387770:CDS |
| CTTGCTTCTGGCCTTTCTTT+TGG | 0.201610 | 3_1:+91849684 | Msa0387770:CDS |
| ACAACAAAAGTGGTTGAATT+TGG | 0.258019 | 3_1:-91850743 | None:intergenic |
| TGGTTGGCTTGGGGACAAAA+TGG | 0.266103 | 3_1:+91849611 | Msa0387770:CDS |
| GTATTCTCCTCTCTTGCTTC+TGG | 0.282043 | 3_1:+91849672 | Msa0387770:CDS |
| AGCACTTTGTGGAACTGTTC+CGG | 0.298632 | 3_1:+91850535 | Msa0387770:CDS |
| TACCAGAAGCTGATTATGTT+TGG | 0.328852 | 3_1:+91849970 | Msa0387770:CDS |
| GTGGAACTGTTCCGGGATAC+TGG | 0.329105 | 3_1:+91850543 | Msa0387770:CDS |
| TGGAGAATCATTCTCATGTT+TGG | 0.337056 | 3_1:+91849990 | Msa0387770:CDS |
| GGAGCTATTATAGGTGCATT+TGG | 0.340643 | 3_1:+91850836 | Msa0387770:CDS |
| CCAAGTAACTTGGTGACATT+TGG | 0.341844 | 3_1:-91849474 | None:intergenic |
| GGACATGTCAAGTGTGTTAC+AGG | 0.350706 | 3_1:+91850247 | Msa0387770:CDS |
| GCACTTTGTGGAACTGTTCC+GGG | 0.351063 | 3_1:+91850536 | Msa0387770:CDS |
| GTGCAAGACAAGAACAGTTT+TGG | 0.354549 | 3_1:+91850311 | Msa0387770:CDS |
| CTCCAAACATAATCAGCTTC+TGG | 0.355251 | 3_1:-91849972 | None:intergenic |
| TTTACTGCTGCTGATACATT+TGG | 0.358950 | 3_1:-91849546 | None:intergenic |
| GGGAAAGCTGGAGCTATTAT+AGG | 0.362181 | 3_1:+91850827 | Msa0387770:CDS |
| GCTGCAGCGTCAACTTTATA+AGG | 0.364153 | 3_1:-91849939 | None:intergenic |
| ACTAAAAGAGAAAACAGAAT+TGG | 0.370784 | 3_1:+91850674 | Msa0387770:CDS |
| ACATTTGGAGGCAAAGTTCC+AGG | 0.372446 | 3_1:-91849531 | None:intergenic |
| CCAAATGTCACCAAGTTACT+TGG | 0.375080 | 3_1:+91849474 | Msa0387770:CDS |
| TTTCTTGTGCCAGAAGCTAA+TGG | 0.378357 | 3_1:+91850983 | Msa0387770:CDS |
| CTTGCTGTGGTTAATTGTCT+TGG | 0.380235 | 3_1:+91850947 | Msa0387770:CDS |
| CTGCTGGTTTAACTTACTAT+TGG | 0.383547 | 3_1:+91850021 | Msa0387770:CDS |
| CACTCAGCAAAGGGTACAAT+TGG | 0.385896 | 3_1:+91849708 | Msa0387770:CDS |
| GCAGGGTACCCTGCTGGTAT+TGG | 0.388751 | 3_1:+91850902 | Msa0387770:CDS |
| GAAATGGTACCATTGTGTTT+TGG | 0.389577 | 3_1:-91849391 | None:intergenic |
| TTCACAGCCATCATAATTGC+TGG | 0.392806 | 3_1:+91849411 | Msa0387770:CDS |
| AATGTATCAGCAGCAGTAAA+TGG | 0.399626 | 3_1:+91849549 | Msa0387770:CDS |
| TCCTCTGCAGCAGGGAAAGC+TGG | 0.401210 | 3_1:+91850815 | Msa0387770:CDS |
| AAAAGTTTACCTTGCTGTCT+CGG | 0.405238 | 3_1:-91850057 | None:intergenic |
| ATCAACAAGCCTCTTCTAAT+AGG | 0.408237 | 3_1:+91851068 | Msa0387770:CDS |
| AGCCATCATAATTGCTGGTA+TGG | 0.413402 | 3_1:+91849416 | Msa0387770:CDS |
| GCTCTTTGTGGCACTCTAGC+AGG | 0.420937 | 3_1:+91849576 | Msa0387770:CDS |
| AGAAGCTAATGGAAAATCAT+TGG | 0.433339 | 3_1:+91850994 | Msa0387770:CDS |
| TCGTGGCGCGTTTATAGCTT+CGG | 0.447395 | 3_1:+91849827 | Msa0387770:CDS |
| ATGTTTGGCGCTGTTCCTGC+TGG | 0.448854 | 3_1:+91850005 | Msa0387770:CDS |
| AAAGTTTACCTTGCTGTCTC+GGG | 0.450939 | 3_1:-91850056 | None:intergenic |
| TGACATTTGGTATGCAGAAA+AGG | 0.456001 | 3_1:-91849461 | None:intergenic |
| GGTTGGCTTGGGGACAAAAT+GGG | 0.456779 | 3_1:+91849612 | Msa0387770:CDS |
| GTAAATGGTGTTGCTCTTTG+TGG | 0.464585 | 3_1:+91849564 | Msa0387770:CDS |
| GTTCCAGGCTTGAGTGCACC+TGG | 0.466167 | 3_1:-91849516 | None:intergenic |
| ACAACGCTTATAGCACTTTG+TGG | 0.467494 | 3_1:+91850524 | Msa0387770:CDS |
| TTCTTCATTCCAATACCAGC+AGG | 0.476749 | 3_1:-91850911 | None:intergenic |
| ACTGCTGCTGATACATTTGG+AGG | 0.480011 | 3_1:-91849543 | None:intergenic |
| CACCCAGGTGCACTCAAGCC+TGG | 0.480902 | 3_1:+91849513 | Msa0387770:CDS |
| CAAGCCAACCAAAGAAAAGT+TGG | 0.491977 | 3_1:-91849599 | None:intergenic |
| TCGCTATTCCGTATGATCAT+TGG | 0.501987 | 3_1:+91850651 | Msa0387770:CDS |
| AAAGATATTTATAGTAGTAT+CGG | 0.503148 | 3_1:+91850440 | Msa0387770:CDS |
| CATGGTATATCCTCTGCAGC+AGG | 0.519226 | 3_1:+91850806 | Msa0387770:CDS |
| CTTGTATGCTTCACAAAGCA+AGG | 0.520337 | 3_1:+91850862 | Msa0387770:CDS |
| AGAAAGGCCAGAAGCAAGAG+AGG | 0.521035 | 3_1:-91849679 | None:intergenic |
| CAATTATGATGGCTGTGAAA+TGG | 0.521173 | 3_1:-91849407 | None:intergenic |
| GTATATTCTTCCAAGTAACT+TGG | 0.522891 | 3_1:-91849484 | None:intergenic |
| GACATAATAGTAGCTGAAAG+AGG | 0.523195 | 3_1:-91849783 | None:intergenic |
| CATGTAGACCTCAACCTAGC+CGG | 0.533609 | 3_1:-91850782 | None:intergenic |
| GAATGCAAAACAAGCAGCGC+AGG | 0.534610 | 3_1:+91850226 | Msa0387770:CDS |
| GCCATCATAATTGCTGGTAT+GGG | 0.536058 | 3_1:+91849417 | Msa0387770:CDS |
| TTGCTGAGTGACCAAAAGAA+AGG | 0.540760 | 3_1:-91849695 | None:intergenic |
| ATGTAGACCTCAACCTAGCC+GGG | 0.545552 | 3_1:-91850781 | None:intergenic |
| TGCTTGGAACAACTTCCACT+TGG | 0.545836 | 3_1:+91850375 | Msa0387770:CDS |
| AGAGATGCAGGGTACCCTGC+TGG | 0.548047 | 3_1:+91850896 | Msa0387770:CDS |
| TAGTATCGGTTGGCTTCCAC+CGG | 0.550442 | 3_1:+91850454 | Msa0387770:CDS |
| TCCCATACCAGCAATTATGA+TGG | 0.555478 | 3_1:-91849418 | None:intergenic |
| AGACACGGTCTTCATCTGCT+TGG | 0.560681 | 3_1:+91850359 | Msa0387770:CDS |
| CTCGGCAGGCACAACAAAAG+TGG | 0.561882 | 3_1:-91850753 | None:intergenic |
| GCCACCGTGAACCAGTATCC+CGG | 0.570413 | 3_1:-91850554 | None:intergenic |
| CAATAGTAAGTTAAACCAGC+AGG | 0.570890 | 3_1:-91850020 | None:intergenic |
| ATATTTATAGTAGTATCGGT+TGG | 0.576691 | 3_1:+91850444 | Msa0387770:CDS |
| TGTTCCGGGATACTGGTTCA+CGG | 0.578109 | 3_1:+91850550 | Msa0387770:CDS |
| CTAGCCGGGAAAATCTCGGC+AGG | 0.590971 | 3_1:-91850767 | None:intergenic |
| CAACCTAGCCGGGAAAATCT+CGG | 0.596897 | 3_1:-91850771 | None:intergenic |
| AGGTTGAGGTCTACATGTCA+TGG | 0.608393 | 3_1:+91850788 | Msa0387770:CDS |
| TCCAGCTTTCCCTGCTGCAG+AGG | 0.609930 | 3_1:-91850816 | None:intergenic |
| ACATAATAGTAGCTGAAAGA+GGG | 0.611460 | 3_1:-91849782 | None:intergenic |
| TGAAAATGCCCGAGACAGCA+AGG | 0.612569 | 3_1:+91850048 | Msa0387770:CDS |
| ATTGCATTCATATCTTGTGC+CGG | 0.613095 | 3_1:-91850473 | None:intergenic |
| AAATCATTGGAAGAAATGAG+TGG | 0.620125 | 3_1:+91851007 | Msa0387770:CDS |
| AGGAACAGTCCTATTAGAAG+AGG | 0.629387 | 3_1:-91851077 | None:intergenic |
| GCATTCATATCTTGTGCCGG+TGG | 0.633100 | 3_1:-91850470 | None:intergenic |
| ATGGTATATCCTCTGCAGCA+GGG | 0.647894 | 3_1:+91850807 | Msa0387770:CDS |
| TTCCAGGCTTGAGTGCACCT+GGG | 0.648892 | 3_1:-91849515 | None:intergenic |
| AAGGAGTTTCTTAGAAGACA+CGG | 0.654294 | 3_1:+91850344 | Msa0387770:CDS |
| GCAGCGTCAACTTTATAAGG+CGG | 0.662919 | 3_1:-91849936 | None:intergenic |
| ATCATGGCTCGTGAACAACT+AGG | 0.672656 | 3_1:+91849345 | None:intergenic |
| AGAATATACTACACACACCC+AGG | 0.681223 | 3_1:+91849498 | Msa0387770:CDS |
| TCTTCATTCCAATACCAGCA+GGG | 0.696508 | 3_1:-91850910 | None:intergenic |
| TTGATGCAGCCAAAACACAA+TGG | 0.702246 | 3_1:+91849382 | Msa0387770:CDS |
| AATATCGAGAAGAAACCAAG+TGG | 0.702390 | 3_1:-91850390 | None:intergenic |
| GTAATAGTAATACATCACAC+AGG | 0.741588 | 3_1:-91851097 | None:intergenic |
| TCCGGGATACTGGTTCACGG+TGG | 0.750080 | 3_1:+91850553 | Msa0387770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATATTTATAGTAGTAT+CGG | + | chr3_1:91850440-91850459 | Msa0387770:CDS | 15.0% |
| !! | AAAGATATTTATAGTAGTAT+CGG | + | chr3_1:91850440-91850459 | Msa0387770:CDS | 15.0% |
| !!! | ACTTTTTTCTTTGCAAATTT+TGG | + | chr3_1:91850719-91850738 | Msa0387770:CDS | 20.0% |
| !!! | ACTTTTTTCTTTGCAAATTT+TGG | + | chr3_1:91850719-91850738 | Msa0387770:CDS | 20.0% |
| ! | ATGGGAAGAAAAAAAGTTTA+TGG | + | chr3_1:91849630-91849649 | Msa0387770:CDS | 25.0% |
| !!! | CTCTTTGTTTCTTTAGATTT+TGG | + | chr3_1:91849733-91849752 | Msa0387770:CDS | 25.0% |
| ! | ACTACTAAATCACTAACATT+TGG | - | chr3_1:91850093-91850112 | None:intergenic | 25.0% |
| !!! | ATATTTATAGTAGTATCGGT+TGG | + | chr3_1:91850444-91850463 | Msa0387770:CDS | 25.0% |
| ! | ACTAAAAGAGAAAACAGAAT+TGG | + | chr3_1:91850674-91850693 | Msa0387770:CDS | 25.0% |
| ! | ATGGGAAGAAAAAAAGTTTA+TGG | + | chr3_1:91849630-91849649 | Msa0387770:CDS | 25.0% |
| !!! | CTCTTTGTTTCTTTAGATTT+TGG | + | chr3_1:91849733-91849752 | Msa0387770:CDS | 25.0% |
| ! | ACTACTAAATCACTAACATT+TGG | - | chr3_1:91850093-91850112 | None:intergenic | 25.0% |
| !!! | ATATTTATAGTAGTATCGGT+TGG | + | chr3_1:91850444-91850463 | Msa0387770:CDS | 25.0% |
| ! | ACTAAAAGAGAAAACAGAAT+TGG | + | chr3_1:91850674-91850693 | Msa0387770:CDS | 25.0% |
| GTATATTCTTCCAAGTAACT+TGG | - | chr3_1:91849487-91849506 | None:intergenic | 30.0% | |
| !!! | TGTTTCTTTAGATTTTGGCT+AGG | + | chr3_1:91849738-91849757 | Msa0387770:CDS | 30.0% |
| !!! | TTTAGATTTTGGCTAGGTTT+TGG | + | chr3_1:91849744-91849763 | Msa0387770:CDS | 30.0% |
| ACATAATAGTAGCTGAAAGA+GGG | - | chr3_1:91849785-91849804 | None:intergenic | 30.0% | |
| ! | TGCTTTTGATCATGCTTTTA+AGG | + | chr3_1:91849911-91849930 | Msa0387770:CDS | 30.0% |
| ACCTATATAGATAAGTAGCT+CGG | - | chr3_1:91850187-91850206 | None:intergenic | 30.0% | |
| CAAGAAAAAGTAGACAAGAT+AGG | + | chr3_1:91850287-91850306 | Msa0387770:CDS | 30.0% | |
| !!! | CAGTTTTGGTTTGTTTAGTA+AGG | + | chr3_1:91850325-91850344 | Msa0387770:CDS | 30.0% |
| ! | TCGTTTTGCAATTCAACTAA+TGG | + | chr3_1:91850595-91850614 | Msa0387770:CDS | 30.0% |
| ! | CGTTTTGCAATTCAACTAAT+GGG | + | chr3_1:91850596-91850615 | Msa0387770:CDS | 30.0% |
| ! | CTTTTAGTCCAATGATCATA+CGG | - | chr3_1:91850662-91850681 | None:intergenic | 30.0% |
| ACAACAAAAGTGGTTGAATT+TGG | - | chr3_1:91850746-91850765 | None:intergenic | 30.0% | |
| !! | AATGATTTTCCATTAGCTTC+TGG | - | chr3_1:91850995-91851014 | None:intergenic | 30.0% |
| AGAAGCTAATGGAAAATCAT+TGG | + | chr3_1:91850994-91851013 | Msa0387770:CDS | 30.0% | |
| AAATCATTGGAAGAAATGAG+TGG | + | chr3_1:91851007-91851026 | Msa0387770:CDS | 30.0% | |
| GTATATTCTTCCAAGTAACT+TGG | - | chr3_1:91849487-91849506 | None:intergenic | 30.0% | |
| !!! | TGTTTCTTTAGATTTTGGCT+AGG | + | chr3_1:91849738-91849757 | Msa0387770:CDS | 30.0% |
| !!! | TTTAGATTTTGGCTAGGTTT+TGG | + | chr3_1:91849744-91849763 | Msa0387770:CDS | 30.0% |
| ACATAATAGTAGCTGAAAGA+GGG | - | chr3_1:91849785-91849804 | None:intergenic | 30.0% | |
| ! | TGCTTTTGATCATGCTTTTA+AGG | + | chr3_1:91849911-91849930 | Msa0387770:CDS | 30.0% |
| ACCTATATAGATAAGTAGCT+CGG | - | chr3_1:91850187-91850206 | None:intergenic | 30.0% | |
| CAAGAAAAAGTAGACAAGAT+AGG | + | chr3_1:91850287-91850306 | Msa0387770:CDS | 30.0% | |
| !!! | CAGTTTTGGTTTGTTTAGTA+AGG | + | chr3_1:91850325-91850344 | Msa0387770:CDS | 30.0% |
| ! | TCGTTTTGCAATTCAACTAA+TGG | + | chr3_1:91850595-91850614 | Msa0387770:CDS | 30.0% |
| ! | CGTTTTGCAATTCAACTAAT+GGG | + | chr3_1:91850596-91850615 | Msa0387770:CDS | 30.0% |
| ! | CTTTTAGTCCAATGATCATA+CGG | - | chr3_1:91850662-91850681 | None:intergenic | 30.0% |
| ACAACAAAAGTGGTTGAATT+TGG | - | chr3_1:91850746-91850765 | None:intergenic | 30.0% | |
| !! | AATGATTTTCCATTAGCTTC+TGG | - | chr3_1:91850995-91851014 | None:intergenic | 30.0% |
| AGAAGCTAATGGAAAATCAT+TGG | + | chr3_1:91850994-91851013 | Msa0387770:CDS | 30.0% | |
| AAATCATTGGAAGAAATGAG+TGG | + | chr3_1:91851007-91851026 | Msa0387770:CDS | 30.0% | |
| ! | GAAATGGTACCATTGTGTTT+TGG | - | chr3_1:91849394-91849413 | None:intergenic | 35.0% |
| CAATTATGATGGCTGTGAAA+TGG | - | chr3_1:91849410-91849429 | None:intergenic | 35.0% | |
| TGACATTTGGTATGCAGAAA+AGG | - | chr3_1:91849464-91849483 | None:intergenic | 35.0% | |
| TTTACTGCTGCTGATACATT+TGG | - | chr3_1:91849549-91849568 | None:intergenic | 35.0% | |
| AATGTATCAGCAGCAGTAAA+TGG | + | chr3_1:91849549-91849568 | Msa0387770:CDS | 35.0% | |
| !!! | AACTTTTCTTTGGTTGGCTT+GGG | + | chr3_1:91849601-91849620 | Msa0387770:CDS | 35.0% |
| !! | TTTTGGCTAGGTTTTGGTAT+TGG | + | chr3_1:91849750-91849769 | Msa0387770:CDS | 35.0% |
| GACATAATAGTAGCTGAAAG+AGG | - | chr3_1:91849786-91849805 | None:intergenic | 35.0% | |
| TATGCTAACAAAAAGACTCG+TGG | + | chr3_1:91849810-91849829 | Msa0387770:CDS | 35.0% | |
| !! | TATGCAAGGGTTTGGAATTT+TGG | + | chr3_1:91849857-91849876 | Msa0387770:CDS | 35.0% |
| TACCAGAAGCTGATTATGTT+TGG | + | chr3_1:91849970-91849989 | Msa0387770:CDS | 35.0% | |
| TGGAGAATCATTCTCATGTT+TGG | + | chr3_1:91849990-91850009 | Msa0387770:CDS | 35.0% | |
| CAATAGTAAGTTAAACCAGC+AGG | - | chr3_1:91850023-91850042 | None:intergenic | 35.0% | |
| !! | CTGCTGGTTTAACTTACTAT+TGG | + | chr3_1:91850021-91850040 | Msa0387770:CDS | 35.0% |
| ! | AAAAGTTTACCTTGCTGTCT+CGG | - | chr3_1:91850060-91850079 | None:intergenic | 35.0% |
| ACCGAGCTACTTATCTATAT+AGG | + | chr3_1:91850183-91850202 | Msa0387770:intron | 35.0% | |
| AAGGAGTTTCTTAGAAGACA+CGG | + | chr3_1:91850344-91850363 | Msa0387770:CDS | 35.0% | |
| AATATCGAGAAGAAACCAAG+TGG | - | chr3_1:91850393-91850412 | None:intergenic | 35.0% | |
| ATTGCATTCATATCTTGTGC+CGG | - | chr3_1:91850476-91850495 | None:intergenic | 35.0% | |
| ! | GTGGCTTTTATCGATGTTAT+TGG | + | chr3_1:91850572-91850591 | Msa0387770:CDS | 35.0% |
| ATCCAAAAAAGAGAGATGCA+GGG | + | chr3_1:91850885-91850904 | Msa0387770:CDS | 35.0% | |
| ATCAACAAGCCTCTTCTAAT+AGG | + | chr3_1:91851068-91851087 | Msa0387770:CDS | 35.0% | |
| ! | GAAATGGTACCATTGTGTTT+TGG | - | chr3_1:91849394-91849413 | None:intergenic | 35.0% |
| CAATTATGATGGCTGTGAAA+TGG | - | chr3_1:91849410-91849429 | None:intergenic | 35.0% | |
| TGACATTTGGTATGCAGAAA+AGG | - | chr3_1:91849464-91849483 | None:intergenic | 35.0% | |
| TTTACTGCTGCTGATACATT+TGG | - | chr3_1:91849549-91849568 | None:intergenic | 35.0% | |
| AATGTATCAGCAGCAGTAAA+TGG | + | chr3_1:91849549-91849568 | Msa0387770:CDS | 35.0% | |
| !!! | AACTTTTCTTTGGTTGGCTT+GGG | + | chr3_1:91849601-91849620 | Msa0387770:CDS | 35.0% |
| !! | TTTTGGCTAGGTTTTGGTAT+TGG | + | chr3_1:91849750-91849769 | Msa0387770:CDS | 35.0% |
| GACATAATAGTAGCTGAAAG+AGG | - | chr3_1:91849786-91849805 | None:intergenic | 35.0% | |
| TATGCTAACAAAAAGACTCG+TGG | + | chr3_1:91849810-91849829 | Msa0387770:CDS | 35.0% | |
| !! | TATGCAAGGGTTTGGAATTT+TGG | + | chr3_1:91849857-91849876 | Msa0387770:CDS | 35.0% |
| TACCAGAAGCTGATTATGTT+TGG | + | chr3_1:91849970-91849989 | Msa0387770:CDS | 35.0% | |
| TGGAGAATCATTCTCATGTT+TGG | + | chr3_1:91849990-91850009 | Msa0387770:CDS | 35.0% | |
| CAATAGTAAGTTAAACCAGC+AGG | - | chr3_1:91850023-91850042 | None:intergenic | 35.0% | |
| !! | CTGCTGGTTTAACTTACTAT+TGG | + | chr3_1:91850021-91850040 | Msa0387770:CDS | 35.0% |
| ! | AAAAGTTTACCTTGCTGTCT+CGG | - | chr3_1:91850060-91850079 | None:intergenic | 35.0% |
| ACCGAGCTACTTATCTATAT+AGG | + | chr3_1:91850183-91850202 | Msa0387770:intron | 35.0% | |
| AAGGAGTTTCTTAGAAGACA+CGG | + | chr3_1:91850344-91850363 | Msa0387770:CDS | 35.0% | |
| AATATCGAGAAGAAACCAAG+TGG | - | chr3_1:91850393-91850412 | None:intergenic | 35.0% | |
| ATTGCATTCATATCTTGTGC+CGG | - | chr3_1:91850476-91850495 | None:intergenic | 35.0% | |
| ! | GTGGCTTTTATCGATGTTAT+TGG | + | chr3_1:91850572-91850591 | Msa0387770:CDS | 35.0% |
| ATCCAAAAAAGAGAGATGCA+GGG | + | chr3_1:91850885-91850904 | Msa0387770:CDS | 35.0% | |
| ATCAACAAGCCTCTTCTAAT+AGG | + | chr3_1:91851068-91851087 | Msa0387770:CDS | 35.0% | |
| !!! | TTGTGTTTTGGCTGCATCAA+GGG | - | chr3_1:91849382-91849401 | None:intergenic | 40.0% |
| !!! | ATTGTGTTTTGGCTGCATCA+AGG | - | chr3_1:91849383-91849402 | None:intergenic | 40.0% |
| TTGATGCAGCCAAAACACAA+TGG | + | chr3_1:91849382-91849401 | Msa0387770:CDS | 40.0% | |
| TTCACAGCCATCATAATTGC+TGG | + | chr3_1:91849411-91849430 | Msa0387770:CDS | 40.0% | |
| AGCCATCATAATTGCTGGTA+TGG | + | chr3_1:91849416-91849435 | Msa0387770:CDS | 40.0% | |
| GCCATCATAATTGCTGGTAT+GGG | + | chr3_1:91849417-91849436 | Msa0387770:CDS | 40.0% | |
| TCCCATACCAGCAATTATGA+TGG | - | chr3_1:91849421-91849440 | None:intergenic | 40.0% | |
| ! | CCAAGTAACTTGGTGACATT+TGG | - | chr3_1:91849477-91849496 | None:intergenic | 40.0% |
| CCAAATGTCACCAAGTTACT+TGG | + | chr3_1:91849474-91849493 | Msa0387770:CDS | 40.0% | |
| AGAATATACTACACACACCC+AGG | + | chr3_1:91849498-91849517 | Msa0387770:CDS | 40.0% | |
| !! | GTAAATGGTGTTGCTCTTTG+TGG | + | chr3_1:91849564-91849583 | Msa0387770:CDS | 40.0% |
| CAAGCCAACCAAAGAAAAGT+TGG | - | chr3_1:91849602-91849621 | None:intergenic | 40.0% | |
| !! | CAACTTTTCTTTGGTTGGCT+TGG | + | chr3_1:91849600-91849619 | Msa0387770:CDS | 40.0% |
| !!! | ACTTTTCTTTGGTTGGCTTG+GGG | + | chr3_1:91849602-91849621 | Msa0387770:CDS | 40.0% |
| TGGTCTAACTCTTGCTCTTA+TGG | + | chr3_1:91849650-91849669 | Msa0387770:CDS | 40.0% | |
| TTGCTGAGTGACCAAAAGAA+AGG | - | chr3_1:91849698-91849717 | None:intergenic | 40.0% | |
| ! | TTCTTTTGGTCACTCAGCAA+AGG | + | chr3_1:91849698-91849717 | Msa0387770:CDS | 40.0% |
| ! | TCTTTTGGTCACTCAGCAAA+GGG | + | chr3_1:91849699-91849718 | Msa0387770:CDS | 40.0% |
| !! | CTTCGGTTTTTGCTATGCAA+GGG | + | chr3_1:91849844-91849863 | Msa0387770:CDS | 40.0% |
| !! | GTTTTTGCTATGCAAGGGTT+TGG | + | chr3_1:91849849-91849868 | Msa0387770:CDS | 40.0% |
| CTCCAAACATAATCAGCTTC+TGG | - | chr3_1:91849975-91849994 | None:intergenic | 40.0% | |
| ! | AAAGTTTACCTTGCTGTCTC+GGG | - | chr3_1:91850059-91850078 | None:intergenic | 40.0% |
| ! | GTGCAAGACAAGAACAGTTT+TGG | + | chr3_1:91850311-91850330 | Msa0387770:CDS | 40.0% |
| ACAACGCTTATAGCACTTTG+TGG | + | chr3_1:91850524-91850543 | Msa0387770:CDS | 40.0% | |
| TCGCTATTCCGTATGATCAT+TGG | + | chr3_1:91850651-91850670 | Msa0387770:CDS | 40.0% | |
| GGAGCTATTATAGGTGCATT+TGG | + | chr3_1:91850836-91850855 | Msa0387770:CDS | 40.0% | |
| CTTGTATGCTTCACAAAGCA+AGG | + | chr3_1:91850862-91850881 | Msa0387770:CDS | 40.0% | |
| GATCCAAAAAAGAGAGATGC+AGG | + | chr3_1:91850884-91850903 | Msa0387770:CDS | 40.0% | |
| !!! | TACCCTGCATCTCTCTTTTT+TGG | - | chr3_1:91850890-91850909 | None:intergenic | 40.0% |
| TCTTCATTCCAATACCAGCA+GGG | - | chr3_1:91850913-91850932 | None:intergenic | 40.0% | |
| TTCTTCATTCCAATACCAGC+AGG | - | chr3_1:91850914-91850933 | None:intergenic | 40.0% | |
| !!! | CACTCTTATTTTGCTTGCTG+TGG | + | chr3_1:91850934-91850953 | Msa0387770:CDS | 40.0% |
| ! | CTTGCTGTGGTTAATTGTCT+TGG | + | chr3_1:91850947-91850966 | Msa0387770:CDS | 40.0% |
| TTTCTTGTGCCAGAAGCTAA+TGG | + | chr3_1:91850983-91851002 | Msa0387770:CDS | 40.0% | |
| AGGAACAGTCCTATTAGAAG+AGG | - | chr3_1:91851080-91851099 | None:intergenic | 40.0% | |
| !!! | TTGTGTTTTGGCTGCATCAA+GGG | - | chr3_1:91849382-91849401 | None:intergenic | 40.0% |
| !!! | ATTGTGTTTTGGCTGCATCA+AGG | - | chr3_1:91849383-91849402 | None:intergenic | 40.0% |
| TTGATGCAGCCAAAACACAA+TGG | + | chr3_1:91849382-91849401 | Msa0387770:CDS | 40.0% | |
| TTCACAGCCATCATAATTGC+TGG | + | chr3_1:91849411-91849430 | Msa0387770:CDS | 40.0% | |
| AGCCATCATAATTGCTGGTA+TGG | + | chr3_1:91849416-91849435 | Msa0387770:CDS | 40.0% | |
| GCCATCATAATTGCTGGTAT+GGG | + | chr3_1:91849417-91849436 | Msa0387770:CDS | 40.0% | |
| TCCCATACCAGCAATTATGA+TGG | - | chr3_1:91849421-91849440 | None:intergenic | 40.0% | |
| ! | CCAAGTAACTTGGTGACATT+TGG | - | chr3_1:91849477-91849496 | None:intergenic | 40.0% |
| CCAAATGTCACCAAGTTACT+TGG | + | chr3_1:91849474-91849493 | Msa0387770:CDS | 40.0% | |
| AGAATATACTACACACACCC+AGG | + | chr3_1:91849498-91849517 | Msa0387770:CDS | 40.0% | |
| !! | GTAAATGGTGTTGCTCTTTG+TGG | + | chr3_1:91849564-91849583 | Msa0387770:CDS | 40.0% |
| CAAGCCAACCAAAGAAAAGT+TGG | - | chr3_1:91849602-91849621 | None:intergenic | 40.0% | |
| !! | CAACTTTTCTTTGGTTGGCT+TGG | + | chr3_1:91849600-91849619 | Msa0387770:CDS | 40.0% |
| !!! | ACTTTTCTTTGGTTGGCTTG+GGG | + | chr3_1:91849602-91849621 | Msa0387770:CDS | 40.0% |
| TGGTCTAACTCTTGCTCTTA+TGG | + | chr3_1:91849650-91849669 | Msa0387770:CDS | 40.0% | |
| TTGCTGAGTGACCAAAAGAA+AGG | - | chr3_1:91849698-91849717 | None:intergenic | 40.0% | |
| ! | TTCTTTTGGTCACTCAGCAA+AGG | + | chr3_1:91849698-91849717 | Msa0387770:CDS | 40.0% |
| ! | TCTTTTGGTCACTCAGCAAA+GGG | + | chr3_1:91849699-91849718 | Msa0387770:CDS | 40.0% |
| !! | CTTCGGTTTTTGCTATGCAA+GGG | + | chr3_1:91849844-91849863 | Msa0387770:CDS | 40.0% |
| !! | GTTTTTGCTATGCAAGGGTT+TGG | + | chr3_1:91849849-91849868 | Msa0387770:CDS | 40.0% |
| CTCCAAACATAATCAGCTTC+TGG | - | chr3_1:91849975-91849994 | None:intergenic | 40.0% | |
| ! | AAAGTTTACCTTGCTGTCTC+GGG | - | chr3_1:91850059-91850078 | None:intergenic | 40.0% |
| ! | GTGCAAGACAAGAACAGTTT+TGG | + | chr3_1:91850311-91850330 | Msa0387770:CDS | 40.0% |
| ACAACGCTTATAGCACTTTG+TGG | + | chr3_1:91850524-91850543 | Msa0387770:CDS | 40.0% | |
| TCGCTATTCCGTATGATCAT+TGG | + | chr3_1:91850651-91850670 | Msa0387770:CDS | 40.0% | |
| GGAGCTATTATAGGTGCATT+TGG | + | chr3_1:91850836-91850855 | Msa0387770:CDS | 40.0% | |
| CTTGTATGCTTCACAAAGCA+AGG | + | chr3_1:91850862-91850881 | Msa0387770:CDS | 40.0% | |
| GATCCAAAAAAGAGAGATGC+AGG | + | chr3_1:91850884-91850903 | Msa0387770:CDS | 40.0% | |
| !!! | TACCCTGCATCTCTCTTTTT+TGG | - | chr3_1:91850890-91850909 | None:intergenic | 40.0% |
| TCTTCATTCCAATACCAGCA+GGG | - | chr3_1:91850913-91850932 | None:intergenic | 40.0% | |
| TTCTTCATTCCAATACCAGC+AGG | - | chr3_1:91850914-91850933 | None:intergenic | 40.0% | |
| !!! | CACTCTTATTTTGCTTGCTG+TGG | + | chr3_1:91850934-91850953 | Msa0387770:CDS | 40.0% |
| ! | CTTGCTGTGGTTAATTGTCT+TGG | + | chr3_1:91850947-91850966 | Msa0387770:CDS | 40.0% |
| TTTCTTGTGCCAGAAGCTAA+TGG | + | chr3_1:91850983-91851002 | Msa0387770:CDS | 40.0% | |
| AGGAACAGTCCTATTAGAAG+AGG | - | chr3_1:91851080-91851099 | None:intergenic | 40.0% | |
| ACATTTGGAGGCAAAGTTCC+AGG | - | chr3_1:91849534-91849553 | None:intergenic | 45.0% | |
| ACTGCTGCTGATACATTTGG+AGG | - | chr3_1:91849546-91849565 | None:intergenic | 45.0% | |
| ! | CTAGCAGGCCAACTTTTCTT+TGG | + | chr3_1:91849591-91849610 | Msa0387770:CDS | 45.0% |
| ! | CAGGCCAACTTTTCTTTGGT+TGG | + | chr3_1:91849595-91849614 | Msa0387770:CDS | 45.0% |
| GTATTCTCCTCTCTTGCTTC+TGG | + | chr3_1:91849672-91849691 | Msa0387770:CDS | 45.0% | |
| !! | CTTGCTTCTGGCCTTTCTTT+TGG | + | chr3_1:91849684-91849703 | Msa0387770:CDS | 45.0% |
| ! | CACTCAGCAAAGGGTACAAT+TGG | + | chr3_1:91849708-91849727 | Msa0387770:CDS | 45.0% |
| !! | TGGCTAGGTTTTGGTATTGG+TGG | + | chr3_1:91849753-91849772 | Msa0387770:CDS | 45.0% |
| !! | GCTTCGGTTTTTGCTATGCA+AGG | + | chr3_1:91849843-91849862 | Msa0387770:CDS | 45.0% |
| !! | CAAGGGTTTGGAATTTTGGC+TGG | + | chr3_1:91849861-91849880 | Msa0387770:CDS | 45.0% |
| GCAGCGTCAACTTTATAAGG+CGG | - | chr3_1:91849939-91849958 | None:intergenic | 45.0% | |
| GCTGCAGCGTCAACTTTATA+AGG | - | chr3_1:91849942-91849961 | None:intergenic | 45.0% | |
| AAAATCCAGCGTTCGAACTC+TGG | - | chr3_1:91850127-91850146 | None:intergenic | 45.0% | |
| TAGCTCGGTTAGTGAGTGAA+AGG | - | chr3_1:91850172-91850191 | None:intergenic | 45.0% | |
| GGACATGTCAAGTGTGTTAC+AGG | + | chr3_1:91850247-91850266 | Msa0387770:CDS | 45.0% | |
| TGCTTGGAACAACTTCCACT+TGG | + | chr3_1:91850375-91850394 | Msa0387770:CDS | 45.0% | |
| AGCACTTTGTGGAACTGTTC+CGG | + | chr3_1:91850535-91850554 | Msa0387770:CDS | 45.0% | |
| AGGTTGAGGTCTACATGTCA+TGG | + | chr3_1:91850788-91850807 | Msa0387770:CDS | 45.0% | |
| ATGGTATATCCTCTGCAGCA+GGG | + | chr3_1:91850807-91850826 | Msa0387770:CDS | 45.0% | |
| GGGAAAGCTGGAGCTATTAT+AGG | + | chr3_1:91850827-91850846 | Msa0387770:CDS | 45.0% | |
| ACATTTGGAGGCAAAGTTCC+AGG | - | chr3_1:91849534-91849553 | None:intergenic | 45.0% | |
| ACTGCTGCTGATACATTTGG+AGG | - | chr3_1:91849546-91849565 | None:intergenic | 45.0% | |
| ! | CTAGCAGGCCAACTTTTCTT+TGG | + | chr3_1:91849591-91849610 | Msa0387770:CDS | 45.0% |
| ! | CAGGCCAACTTTTCTTTGGT+TGG | + | chr3_1:91849595-91849614 | Msa0387770:CDS | 45.0% |
| GTATTCTCCTCTCTTGCTTC+TGG | + | chr3_1:91849672-91849691 | Msa0387770:CDS | 45.0% | |
| !! | CTTGCTTCTGGCCTTTCTTT+TGG | + | chr3_1:91849684-91849703 | Msa0387770:CDS | 45.0% |
| ! | CACTCAGCAAAGGGTACAAT+TGG | + | chr3_1:91849708-91849727 | Msa0387770:CDS | 45.0% |
| !! | TGGCTAGGTTTTGGTATTGG+TGG | + | chr3_1:91849753-91849772 | Msa0387770:CDS | 45.0% |
| !! | GCTTCGGTTTTTGCTATGCA+AGG | + | chr3_1:91849843-91849862 | Msa0387770:CDS | 45.0% |
| !! | CAAGGGTTTGGAATTTTGGC+TGG | + | chr3_1:91849861-91849880 | Msa0387770:CDS | 45.0% |
| GCAGCGTCAACTTTATAAGG+CGG | - | chr3_1:91849939-91849958 | None:intergenic | 45.0% | |
| GCTGCAGCGTCAACTTTATA+AGG | - | chr3_1:91849942-91849961 | None:intergenic | 45.0% | |
| AAAATCCAGCGTTCGAACTC+TGG | - | chr3_1:91850127-91850146 | None:intergenic | 45.0% | |
| TAGCTCGGTTAGTGAGTGAA+AGG | - | chr3_1:91850172-91850191 | None:intergenic | 45.0% | |
| GGACATGTCAAGTGTGTTAC+AGG | + | chr3_1:91850247-91850266 | Msa0387770:CDS | 45.0% | |
| TGCTTGGAACAACTTCCACT+TGG | + | chr3_1:91850375-91850394 | Msa0387770:CDS | 45.0% | |
| AGCACTTTGTGGAACTGTTC+CGG | + | chr3_1:91850535-91850554 | Msa0387770:CDS | 45.0% | |
| AGGTTGAGGTCTACATGTCA+TGG | + | chr3_1:91850788-91850807 | Msa0387770:CDS | 45.0% | |
| ATGGTATATCCTCTGCAGCA+GGG | + | chr3_1:91850807-91850826 | Msa0387770:CDS | 45.0% | |
| GGGAAAGCTGGAGCTATTAT+AGG | + | chr3_1:91850827-91850846 | Msa0387770:CDS | 45.0% | |
| !! | TGGTTGGCTTGGGGACAAAA+TGG | + | chr3_1:91849611-91849630 | Msa0387770:CDS | 50.0% |
| !! | GGTTGGCTTGGGGACAAAAT+GGG | + | chr3_1:91849612-91849631 | Msa0387770:CDS | 50.0% |
| AGAAAGGCCAGAAGCAAGAG+AGG | - | chr3_1:91849682-91849701 | None:intergenic | 50.0% | |
| TCGTGGCGCGTTTATAGCTT+CGG | + | chr3_1:91849827-91849846 | Msa0387770:CDS | 50.0% | |
| !!! | GGGTTTGGAATTTTGGCTGG+TGG | + | chr3_1:91849864-91849883 | Msa0387770:CDS | 50.0% |
| TGAAAATGCCCGAGACAGCA+AGG | + | chr3_1:91850048-91850067 | Msa0387770:CDS | 50.0% | |
| AGTTTCCAGAGTTCGAACGC+TGG | + | chr3_1:91850119-91850138 | Msa0387770:intron | 50.0% | |
| GAATGCAAAACAAGCAGCGC+AGG | + | chr3_1:91850226-91850245 | Msa0387770:CDS | 50.0% | |
| AGACACGGTCTTCATCTGCT+TGG | + | chr3_1:91850359-91850378 | Msa0387770:CDS | 50.0% | |
| !! | TAGTATCGGTTGGCTTCCAC+CGG | + | chr3_1:91850454-91850473 | Msa0387770:CDS | 50.0% |
| GCATTCATATCTTGTGCCGG+TGG | - | chr3_1:91850473-91850492 | None:intergenic | 50.0% | |
| GCACTTTGTGGAACTGTTCC+GGG | + | chr3_1:91850536-91850555 | Msa0387770:CDS | 50.0% | |
| !! | TGTTCCGGGATACTGGTTCA+CGG | + | chr3_1:91850550-91850569 | Msa0387770:CDS | 50.0% |
| CAACCTAGCCGGGAAAATCT+CGG | - | chr3_1:91850774-91850793 | None:intergenic | 50.0% | |
| ! | AGATTTTCCCGGCTAGGTTG+AGG | + | chr3_1:91850774-91850793 | Msa0387770:CDS | 50.0% |
| ATGTAGACCTCAACCTAGCC+GGG | - | chr3_1:91850784-91850803 | None:intergenic | 50.0% | |
| CATGTAGACCTCAACCTAGC+CGG | - | chr3_1:91850785-91850804 | None:intergenic | 50.0% | |
| CATGGTATATCCTCTGCAGC+AGG | + | chr3_1:91850806-91850825 | Msa0387770:CDS | 50.0% | |
| !! | TGGTTGGCTTGGGGACAAAA+TGG | + | chr3_1:91849611-91849630 | Msa0387770:CDS | 50.0% |
| !! | GGTTGGCTTGGGGACAAAAT+GGG | + | chr3_1:91849612-91849631 | Msa0387770:CDS | 50.0% |
| AGAAAGGCCAGAAGCAAGAG+AGG | - | chr3_1:91849682-91849701 | None:intergenic | 50.0% | |
| TCGTGGCGCGTTTATAGCTT+CGG | + | chr3_1:91849827-91849846 | Msa0387770:CDS | 50.0% | |
| !!! | GGGTTTGGAATTTTGGCTGG+TGG | + | chr3_1:91849864-91849883 | Msa0387770:CDS | 50.0% |
| TGAAAATGCCCGAGACAGCA+AGG | + | chr3_1:91850048-91850067 | Msa0387770:CDS | 50.0% | |
| AGTTTCCAGAGTTCGAACGC+TGG | + | chr3_1:91850119-91850138 | Msa0387770:intron | 50.0% | |
| GAATGCAAAACAAGCAGCGC+AGG | + | chr3_1:91850226-91850245 | Msa0387770:CDS | 50.0% | |
| AGACACGGTCTTCATCTGCT+TGG | + | chr3_1:91850359-91850378 | Msa0387770:CDS | 50.0% | |
| !! | TAGTATCGGTTGGCTTCCAC+CGG | + | chr3_1:91850454-91850473 | Msa0387770:CDS | 50.0% |
| GCATTCATATCTTGTGCCGG+TGG | - | chr3_1:91850473-91850492 | None:intergenic | 50.0% | |
| GCACTTTGTGGAACTGTTCC+GGG | + | chr3_1:91850536-91850555 | Msa0387770:CDS | 50.0% | |
| !! | TGTTCCGGGATACTGGTTCA+CGG | + | chr3_1:91850550-91850569 | Msa0387770:CDS | 50.0% |
| CAACCTAGCCGGGAAAATCT+CGG | - | chr3_1:91850774-91850793 | None:intergenic | 50.0% | |
| ! | AGATTTTCCCGGCTAGGTTG+AGG | + | chr3_1:91850774-91850793 | Msa0387770:CDS | 50.0% |
| ATGTAGACCTCAACCTAGCC+GGG | - | chr3_1:91850784-91850803 | None:intergenic | 50.0% | |
| CATGTAGACCTCAACCTAGC+CGG | - | chr3_1:91850785-91850804 | None:intergenic | 50.0% | |
| CATGGTATATCCTCTGCAGC+AGG | + | chr3_1:91850806-91850825 | Msa0387770:CDS | 50.0% | |
| TTCCAGGCTTGAGTGCACCT+GGG | - | chr3_1:91849518-91849537 | None:intergenic | 55.0% | |
| GCTCTTTGTGGCACTCTAGC+AGG | + | chr3_1:91849576-91849595 | Msa0387770:CDS | 55.0% | |
| ATGTTTGGCGCTGTTCCTGC+TGG | + | chr3_1:91850005-91850024 | Msa0387770:CDS | 55.0% | |
| GTGGAACTGTTCCGGGATAC+TGG | + | chr3_1:91850543-91850562 | Msa0387770:CDS | 55.0% | |
| CTCGGCAGGCACAACAAAAG+TGG | - | chr3_1:91850756-91850775 | None:intergenic | 55.0% | |
| ! | TGTGCCTGCCGAGATTTTCC+CGG | + | chr3_1:91850763-91850782 | Msa0387770:CDS | 55.0% |
| TTCCAGGCTTGAGTGCACCT+GGG | - | chr3_1:91849518-91849537 | None:intergenic | 55.0% | |
| GCTCTTTGTGGCACTCTAGC+AGG | + | chr3_1:91849576-91849595 | Msa0387770:CDS | 55.0% | |
| ATGTTTGGCGCTGTTCCTGC+TGG | + | chr3_1:91850005-91850024 | Msa0387770:CDS | 55.0% | |
| GTGGAACTGTTCCGGGATAC+TGG | + | chr3_1:91850543-91850562 | Msa0387770:CDS | 55.0% | |
| CTCGGCAGGCACAACAAAAG+TGG | - | chr3_1:91850756-91850775 | None:intergenic | 55.0% | |
| ! | TGTGCCTGCCGAGATTTTCC+CGG | + | chr3_1:91850763-91850782 | Msa0387770:CDS | 55.0% |
| GTTCCAGGCTTGAGTGCACC+TGG | - | chr3_1:91849519-91849538 | None:intergenic | 60.0% | |
| !! | TCCGGGATACTGGTTCACGG+TGG | + | chr3_1:91850553-91850572 | Msa0387770:CDS | 60.0% |
| GCCACCGTGAACCAGTATCC+CGG | - | chr3_1:91850557-91850576 | None:intergenic | 60.0% | |
| CTAGCCGGGAAAATCTCGGC+AGG | - | chr3_1:91850770-91850789 | None:intergenic | 60.0% | |
| ! | CTGCCGAGATTTTCCCGGCT+AGG | + | chr3_1:91850768-91850787 | Msa0387770:CDS | 60.0% |
| TCCTCTGCAGCAGGGAAAGC+TGG | + | chr3_1:91850815-91850834 | Msa0387770:CDS | 60.0% | |
| TCCAGCTTTCCCTGCTGCAG+AGG | - | chr3_1:91850819-91850838 | None:intergenic | 60.0% | |
| ! | AGAGATGCAGGGTACCCTGC+TGG | + | chr3_1:91850896-91850915 | Msa0387770:CDS | 60.0% |
| ! | GCAGGGTACCCTGCTGGTAT+TGG | + | chr3_1:91850902-91850921 | Msa0387770:CDS | 60.0% |
| GTTCCAGGCTTGAGTGCACC+TGG | - | chr3_1:91849519-91849538 | None:intergenic | 60.0% | |
| !! | TCCGGGATACTGGTTCACGG+TGG | + | chr3_1:91850553-91850572 | Msa0387770:CDS | 60.0% |
| GCCACCGTGAACCAGTATCC+CGG | - | chr3_1:91850557-91850576 | None:intergenic | 60.0% | |
| CTAGCCGGGAAAATCTCGGC+AGG | - | chr3_1:91850770-91850789 | None:intergenic | 60.0% | |
| ! | CTGCCGAGATTTTCCCGGCT+AGG | + | chr3_1:91850768-91850787 | Msa0387770:CDS | 60.0% |
| TCCTCTGCAGCAGGGAAAGC+TGG | + | chr3_1:91850815-91850834 | Msa0387770:CDS | 60.0% | |
| TCCAGCTTTCCCTGCTGCAG+AGG | - | chr3_1:91850819-91850838 | None:intergenic | 60.0% | |
| ! | AGAGATGCAGGGTACCCTGC+TGG | + | chr3_1:91850896-91850915 | Msa0387770:CDS | 60.0% |
| ! | GCAGGGTACCCTGCTGGTAT+TGG | + | chr3_1:91850902-91850921 | Msa0387770:CDS | 60.0% |
| CACCCAGGTGCACTCAAGCC+TGG | + | chr3_1:91849513-91849532 | Msa0387770:CDS | 65.0% | |
| CACCCAGGTGCACTCAAGCC+TGG | + | chr3_1:91849513-91849532 | Msa0387770:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 91849348 | 91851105 | 91849348 | ID=Msa0387770;Name=Msa0387770 |
| chr3_1 | mRNA | 91849348 | 91851105 | 91849348 | ID=Msa0387770-mRNA-1;Parent=Msa0387770;Name=Msa0387770-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|540 |
| chr3_1 | exon | 91849348 | 91850069 | 91849348 | ID=Msa0387770-mRNA-1:exon:25669;Parent=Msa0387770-mRNA-1 |
| chr3_1 | exon | 91850205 | 91851105 | 91850205 | ID=Msa0387770-mRNA-1:exon:25670;Parent=Msa0387770-mRNA-1 |
| chr3_1 | CDS | 91849348 | 91850069 | 91849348 | ID=Msa0387770-mRNA-1:cds;Parent=Msa0387770-mRNA-1 |
| chr3_1 | CDS | 91850205 | 91851105 | 91850205 | ID=Msa0387770-mRNA-1:cds;Parent=Msa0387770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
