AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0388140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0388140 MtrunA17_Chr5g0447521 95.265 887 40 1 1 887 168 1052 0.0 1726
Msa0388140 MtrunA17_Chr4g0005551 66.940 853 270 8 1 850 133 976 0.0 1090
Msa0388140 MtrunA17_Chr6g0456201 33.409 877 518 19 1 839 156 1004 3.14e-133 424
Msa0388140 MtrunA17_Chr7g0260401 32.721 871 523 18 1 832 184 1030 4.34e-125 403
Msa0388140 MtrunA17_Chr4g0002331 29.966 871 545 17 1 832 228 1072 8.32e-112 369
Msa0388140 MtrunA17_Chr2g0298871 28.766 883 560 21 1 842 215 1069 1.52e-104 348
Msa0388140 MtrunA17_Chr8g0382071 27.816 870 566 19 1 839 174 1012 8.35e-87 299
Msa0388140 MtrunA17_Chr1g0173111 27.324 893 577 23 1 859 173 1027 1.06e-82 287
Msa0388140 MtrunA17_Chr8g0340261 32.292 576 328 13 309 853 4 548 3.64e-81 272
Msa0388140 MtrunA17_Chr4g0054021 25.939 852 574 18 1 826 102 922 4.94e-77 270
Msa0388140 MtrunA17_Chr8g0355421 26.759 867 571 20 1 836 167 1000 1.65e-76 270
Msa0388140 MtrunA17_Chr4g0020551 26.609 808 517 22 1 769 107 877 1.89e-74 261
Msa0388140 MtrunA17_Chr5g0401211 25.952 867 583 20 1 839 177 1012 3.90e-72 257
Msa0388140 MtrunA17_Chr3g0134771 25.465 860 571 22 1 826 178 1001 6.67e-71 253
Msa0388140 MtrunA17_Chr8g0340271 32.026 306 188 6 1 302 154 443 1.21e-33 136
Msa0388140 MtrunA17_Chr2g0334221 34.274 248 142 5 350 580 74 317 7.04e-33 130
Msa0388140 MtrunA17_Chr2g0334201 30.909 165 107 2 684 842 1 164 4.10e-22 94.7
Msa0388140 MtrunA17_Chr2g0334231 25.490 306 211 5 1 304 209 499 4.79e-20 94.7
Msa0388140 MtrunA17_Chr7g0263361 20.951 778 485 24 1 681 86 830 5.81e-19 92.8
Msa0388140 MtrunA17_Chr3g0134951 23.247 271 183 5 459 715 561 820 5.25e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0388140 AT3G63380.1 32.183 898 531 21 1 863 168 1022 4.35e-125 403
Msa0388140 AT3G22910.1 32.407 864 533 15 1 839 163 1000 5.06e-121 392
Msa0388140 AT5G57110.1 29.851 871 544 18 1 832 196 1038 8.32e-114 374
Msa0388140 AT5G57110.3 29.851 871 544 18 1 832 196 1038 8.32e-114 374
Msa0388140 AT5G57110.2 29.851 871 544 18 1 832 196 1038 8.32e-114 374
Msa0388140 AT4G29900.1 29.091 880 560 19 1 842 196 1049 1.31e-107 357
Msa0388140 AT4G29900.2 29.091 880 560 19 1 842 196 1049 1.31e-107 357
Msa0388140 AT3G21180.1 29.138 882 558 19 1 842 210 1064 3.48e-104 348
Msa0388140 AT3G57330.2 27.093 860 563 20 1 832 118 941 3.67e-88 301
Msa0388140 AT3G57330.1 27.093 860 563 20 1 832 173 996 1.93e-87 301
Msa0388140 AT2G41560.2 27.074 868 564 19 1 836 71 901 6.05e-85 292
Msa0388140 AT2G41560.3 27.074 868 564 19 1 836 71 901 6.05e-85 292
Msa0388140 AT2G41560.4 27.074 868 564 19 1 836 71 901 6.05e-85 292
Msa0388140 AT2G41560.1 27.074 868 564 19 1 836 173 1003 8.90e-84 290
Msa0388140 AT1G27770.3 25.408 858 575 17 1 826 115 939 2.64e-76 268
Msa0388140 AT1G27770.4 25.408 858 575 17 1 826 178 1002 9.12e-76 268
Msa0388140 AT1G27770.1 25.408 858 575 17 1 826 178 1002 9.12e-76 268
Msa0388140 AT4G37640.1 25.965 855 573 19 1 826 176 999 1.60e-73 261
Msa0388140 AT2G22950.1 25.289 866 591 17 1 839 177 1013 9.86e-71 253
Msa0388140 AT5G53010.1 24.586 846 543 24 1 805 223 1014 2.07e-48 187
Msa0388140 AT1G27770.2 31.561 301 189 6 536 826 635 928 4.25e-33 138
Msa0388140 AT1G27770.2 21.731 566 391 13 1 542 178 715 5.99e-28 122
Msa0388140 AT5G53010.2 25.220 567 374 18 1 542 223 764 8.05e-30 127
Msa0388140 AT1G10130.1 21.294 742 446 22 31 681 91 785 1.84e-15 81.6

Find 250 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTGCTGTACTTGCTTC+TGG 0.133780 3_1:-92454600 None:intergenic
ACCTAACACCTAAGCCTATT+TGG 0.157063 3_1:+92454311 Msa0388140:five_prime_UTR
ACCATCATGCCAACCATATT+TGG 0.174847 3_1:-92455229 None:intergenic
CAATGGAAGTTAGCAAAATT+TGG 0.179999 3_1:+92456096 Msa0388140:CDS
GCCTGCATAATACTTGAATT+TGG 0.196809 3_1:+92457367 Msa0388140:CDS
ACGAGGAAGGATTTCGATTT+TGG 0.202910 3_1:+92455881 Msa0388140:CDS
CAACTGACAGTTGGTATATC+AGG 0.229585 3_1:+92457118 Msa0388140:CDS
TAACAGAAATCCAATTGATT+TGG 0.253162 3_1:+92457188 Msa0388140:CDS
GAATGCGCTAATGTGTCTTC+TGG 0.262195 3_1:+92457213 Msa0388140:CDS
AATTTCAATGCTGCTGATTT+CGG 0.277466 3_1:+92455167 Msa0388140:exon
CCTGCATAATACTTGAATTT+GGG 0.278796 3_1:+92457368 Msa0388140:CDS
GTCCAATTCGTTTGTTTCCT+TGG 0.288653 3_1:+92456244 Msa0388140:CDS
CTTCTTGAGCTTGGTGGGAT+TGG 0.294351 3_1:+92454866 Msa0388140:five_prime_UTR
TGATTATAACCAAGAAAATA+TGG 0.302056 3_1:+92457308 Msa0388140:CDS
CCAAGAGGGTGGTGGAGTTT+TGG 0.302404 3_1:+92456346 Msa0388140:CDS
ACATTATTACCTTTAATATC+TGG 0.306241 3_1:-92455810 None:intergenic
CAAAGCTAGATTAGTCAAAC+TGG 0.310047 3_1:+92456805 Msa0388140:CDS
GAAAATCAGAAAATCAAATA+TGG 0.313239 3_1:+92456485 Msa0388140:CDS
CACTGTTTCTCAGTGGCTTT+AGG 0.314211 3_1:+92457526 Msa0388140:CDS
AACAAAAGAAGCATCATAAA+TGG 0.318121 3_1:-92457781 None:intergenic
ATTATGGTATGTGTCCAAAT+AGG 0.320978 3_1:-92454325 None:intergenic
GCTTTGTCAAGGTAGGAAAT+TGG 0.321870 3_1:-92455705 None:intergenic
ATCAATACCAACAGAAGATT+TGG 0.322142 3_1:-92454780 None:intergenic
CTTCTGCCGGCCTTCACAAT+TGG 0.333492 3_1:-92457061 None:intergenic
AGAGAAAGAGTAACCATAAT+TGG 0.335321 3_1:-92455948 None:intergenic
TAAGCTTCTCTGGCATTCTA+TGG 0.339064 3_1:+92455118 Msa0388140:five_prime_UTR
ATCAATTGGATTTCTGTTAG+AGG 0.341325 3_1:-92457184 None:intergenic
TTCTTGCTGTACTTGCTTCT+GGG 0.342710 3_1:-92454599 None:intergenic
TGTATACCAGTTAATAGTTT+AGG 0.348825 3_1:+92457871 Msa0388140:three_prime_UTR
TGGGGCTGCATCCACAATAT+TGG 0.349057 3_1:+92456415 Msa0388140:CDS
AACAGAAATCCAATTGATTT+GGG 0.352491 3_1:+92457189 Msa0388140:CDS
TGGATGGGCCATTTGTGTTA+TGG 0.354395 3_1:+92457624 Msa0388140:CDS
GAATCACCTAAACTATTAAC+TGG 0.355906 3_1:-92457877 None:intergenic
GAGAATTTACACACAAAATC+TGG 0.357742 3_1:-92454277 None:intergenic
CTCTGTGGCAAAGGACAAAA+AGG 0.357858 3_1:-92455190 None:intergenic
CATTCTTGAACATGGCAAAC+TGG 0.359529 3_1:+92456316 Msa0388140:CDS
TTGTCAACTTGTACAACAAT+GGG 0.362598 3_1:+92456023 Msa0388140:CDS
TTTGAGCCAGCTATAAGAAA+TGG 0.367284 3_1:-92455555 None:intergenic
TGCCAAGGAAACAAACGAAT+TGG 0.368813 3_1:-92456246 None:intergenic
CCGACACTACCTTATCATTC+TGG 0.370237 3_1:-92455977 None:intergenic
TCCAAATAGGCTTAGGTGTT+AGG 0.371321 3_1:-92454312 None:intergenic
ATCAGTTGATTCCTATCATA+TGG 0.371423 3_1:-92457289 None:intergenic
TAGTTTGCACTAGAAGTTGT+AGG 0.373020 3_1:-92454668 None:intergenic
GCGCATTCACCCAAATCAAT+TGG 0.376917 3_1:-92457198 None:intergenic
AAGCAGGAGGGACCCAAATA+TGG 0.386700 3_1:+92455216 Msa0388140:CDS
TGTGAATATTGTTGTAATCA+AGG 0.389115 3_1:-92457152 None:intergenic
TCTGTCGAGTTCGATTTGTT+TGG 0.389147 3_1:-92455618 None:intergenic
TGATGGAATACATATCAAAT+TGG 0.391422 3_1:+92456676 Msa0388140:CDS
GGAGGGTTGCCAGATATTAA+AGG 0.393700 3_1:+92455801 Msa0388140:CDS
GCAACATGGAGTGCCAATTA+TGG 0.394225 3_1:+92455935 Msa0388140:CDS
GTCATCTGCATTGATGTATC+TGG 0.395410 3_1:+92456056 Msa0388140:CDS
GAAAGAAACAGCGTGTGAAC+TGG 0.398536 3_1:+92456724 Msa0388140:CDS
GGGTTGACTCTGGAGAGTCC+AGG 0.398687 3_1:-92457726 None:intergenic
TTGAAATCTCTTCTTGAGCT+TGG 0.405671 3_1:+92454857 Msa0388140:five_prime_UTR
TGGACAGGTGATTCAAGATA+TGG 0.406755 3_1:+92456505 Msa0388140:CDS
ATAGTTTGTGATGTTCTTCA+TGG 0.407963 3_1:+92454890 Msa0388140:five_prime_UTR
ACAGAGATGAAGGGCTCAAT+GGG 0.413653 3_1:+92455636 Msa0388140:CDS
CCATCATGCCAACCATATTT+GGG 0.417664 3_1:-92455228 None:intergenic
TTTGATAGTAGAGAGGGTTC+TGG 0.419569 3_1:+92457007 Msa0388140:CDS
AAATCTCTTCTTGAGCTTGG+TGG 0.420402 3_1:+92454860 Msa0388140:five_prime_UTR
CTCATACAATTAACATCAGT+TGG 0.420995 3_1:-92454185 None:intergenic
TGTCTATAAGCAAGTGCAAT+TGG 0.421032 3_1:-92456545 None:intergenic
ATTCAAGATATGGAGGATAA+TGG 0.425036 3_1:+92456515 Msa0388140:CDS
GAAGAATGTATTGAAGATCA+TGG 0.429623 3_1:-92457428 None:intergenic
GCTTATTGACGGAACTCCTT+GGG 0.431468 3_1:+92455841 Msa0388140:CDS
AACCTTGGAATAAGCTTCTC+TGG 0.433403 3_1:+92455108 Msa0388140:five_prime_UTR
AATCTCTTCTTGAGCTTGGT+GGG 0.433995 3_1:+92454861 Msa0388140:five_prime_UTR
GTACGGTGTTTGCAAGATAA+AGG 0.438189 3_1:+92456878 Msa0388140:CDS
GAGGTTCTAGCAGGAGGACT+AGG 0.439237 3_1:-92454752 None:intergenic
TTGTTCCCTCTAGGACTAGC+AGG 0.441060 3_1:+92457799 Msa0388140:CDS
GGCTTATTGACGGAACTCCT+TGG 0.445403 3_1:+92455840 Msa0388140:CDS
GTGGTTATTGAGTATGCAAA+AGG 0.448861 3_1:+92457571 Msa0388140:CDS
CCCAAATATGGTTGGCATGA+TGG 0.449483 3_1:+92455228 Msa0388140:CDS
TTGTCAAACAACCATATGAT+AGG 0.450454 3_1:+92457278 Msa0388140:CDS
GGTTGACTCTGGAGAGTCCA+GGG 0.451520 3_1:-92457725 None:intergenic
GAAGTTAGCAAAATTTGGAT+AGG 0.453475 3_1:+92456101 Msa0388140:CDS
GACAGTTATGGTTGAATTGA+AGG 0.455352 3_1:-92454475 None:intergenic
TTAATTCCATCACCATCATT+AGG 0.456572 3_1:-92457240 None:intergenic
CATGATGAGGTTCCTGCAGA+TGG 0.459115 3_1:+92455453 Msa0388140:CDS
GTTCTAAAGATAGCTGATGT+AGG 0.465453 3_1:+92456956 Msa0388140:CDS
AAGCAAGTGCAATTGGCTTA+AGG 0.466030 3_1:-92456538 None:intergenic
TGCGGCTGAATGCCACTGGA+TGG 0.469736 3_1:+92457608 Msa0388140:CDS
CCTTCAAGGTGTCCGTCTAC+CGG 0.470089 3_1:-92456758 None:intergenic
GACACAACCAAGCATGTCCT+TGG 0.470309 3_1:+92454513 Msa0388140:five_prime_UTR
CTACCTTATCATTCTGGTAA+TGG 0.470573 3_1:-92455971 None:intergenic
CAGAAAATCACTAGGAACCT+TGG 0.471195 3_1:+92455093 Msa0388140:intron
CAAGAGCAAGATTTACAGCT+TGG 0.471941 3_1:-92455386 None:intergenic
ACCATGAGAAGCTTGTCTTC+AGG 0.473929 3_1:-92456857 None:intergenic
GAGAACCCATTTCTTATAGC+TGG 0.479384 3_1:+92455549 Msa0388140:CDS
AGAAGTTGTAGGTTTCTTCA+AGG 0.480044 3_1:-92454657 None:intergenic
AAAGGTAATAATGTTTCAGT+TGG 0.481387 3_1:+92455819 Msa0388140:CDS
TTGAGCCAGCTATAAGAAAT+GGG 0.482023 3_1:-92455554 None:intergenic
CCCAAATTCAAGTATTATGC+AGG 0.482382 3_1:-92457368 None:intergenic
AATGCGCTAATGTGTCTTCT+GGG 0.483840 3_1:+92457214 Msa0388140:CDS
CATCTGCAGGAACCTCATCA+TGG 0.485681 3_1:-92455452 None:intergenic
GACAGAGATGAAGGGCTCAA+TGG 0.486796 3_1:+92455635 Msa0388140:CDS
ATCGAACTCGACAGAGATGA+AGG 0.488534 3_1:+92455626 Msa0388140:CDS
CCAAAACTCCACCACCCTCT+TGG 0.489064 3_1:-92456346 None:intergenic
AAAGGTTGTGGGGTTGACTC+TGG 0.489348 3_1:-92457736 None:intergenic
TGTTTCAGTTGGCTTATTGA+CGG 0.489827 3_1:+92455830 Msa0388140:CDS
AAGTTAGCAAAATTTGGATA+GGG 0.490191 3_1:+92456102 Msa0388140:CDS
CAAATTATTTGATAGTAGAG+AGG 0.493138 3_1:+92457000 Msa0388140:CDS
ATCTGCAGGAACCTCATCAT+GGG 0.493358 3_1:-92455451 None:intergenic
GAAGCAAGTACAGCAAGAAA+TGG 0.493430 3_1:+92454603 Msa0388140:five_prime_UTR
TCTTCTGGGTGGCCTAATGA+TGG 0.493808 3_1:+92457228 Msa0388140:CDS
TCTCCATTACCAGAATGATA+AGG 0.497677 3_1:+92455968 Msa0388140:CDS
CTGGGTAAAGCCATTGCAAT+GGG 0.497809 3_1:+92456824 Msa0388140:CDS
GCTGGCTCAAAGGTGATTGA+AGG 0.498712 3_1:+92455567 Msa0388140:CDS
TTGGCAGAGGAGGTTCTAGC+AGG 0.499152 3_1:-92454761 None:intergenic
CTGCTTGAACTCTGTGGCAA+AGG 0.502496 3_1:-92455199 None:intergenic
AGCACCAACCATAACACAAA+TGG 0.504992 3_1:-92457632 None:intergenic
CCGGTAGACGGACACCTTGA+AGG 0.506635 3_1:+92456758 Msa0388140:CDS
GACAAGCTTAAACAAGGAGT+TGG 0.507150 3_1:+92456182 Msa0388140:CDS
CATCTTAATGTAATAGTGCC+AGG 0.508768 3_1:+92457846 Msa0388140:three_prime_UTR
ATACCCTCTCATACTCTTGA+GGG 0.509190 3_1:+92454803 Msa0388140:five_prime_UTR
AGAACACATTTCCAATATTG+TGG 0.511721 3_1:-92456426 None:intergenic
ATATGCACTTGCACTGGAGT+GGG 0.512048 3_1:+92456396 Msa0388140:CDS
CAAAATTTGGATAGGGGAGG+CGG 0.512201 3_1:+92456109 Msa0388140:CDS
AAGAGCAAGATTTACAGCTT+GGG 0.513528 3_1:-92455385 None:intergenic
GTATGTGTCCAAATAGGCTT+AGG 0.513648 3_1:-92454319 None:intergenic
TTTGTCAACTTGTACAACAA+TGG 0.515124 3_1:+92456022 Msa0388140:CDS
TTTGTTAGTTGTGACAGTTA+TGG 0.515484 3_1:-92454487 None:intergenic
TCTGATTCCAAGGACATGCT+TGG 0.516296 3_1:-92454520 None:intergenic
TGGGCCATTTGTGTTATGGT+TGG 0.517018 3_1:+92457628 Msa0388140:CDS
AAAGAACTTCAAGACTTGAA+TGG 0.517146 3_1:+92456782 Msa0388140:CDS
CTAGGAGGCACTGAGGTGTA+TGG 0.517434 3_1:-92454734 None:intergenic
TGAATTGACCTTGTTAGCAC+TGG 0.517568 3_1:+92456595 Msa0388140:CDS
CACCACTGATACTTCACCCC+TGG 0.518181 3_1:+92457708 Msa0388140:CDS
AACAAGATATGCACTTGCAC+TGG 0.521150 3_1:+92456390 Msa0388140:CDS
ATTGTGATATTCACTTCTGC+CGG 0.521929 3_1:-92457074 None:intergenic
CTGAAACCAATTGTGAAGGC+CGG 0.523980 3_1:+92457055 Msa0388140:CDS
TGGCGTAAAAGCTTATACAT+AGG 0.526016 3_1:+92454623 Msa0388140:five_prime_UTR
TGCCGTATCTGATATTGTGG+TGG 0.527209 3_1:+92455407 Msa0388140:CDS
TCAGAAAATCAAATATGGAC+AGG 0.529401 3_1:+92456490 Msa0388140:CDS
TGCATGCGGCTGAATGCCAC+TGG 0.529895 3_1:+92457604 Msa0388140:CDS
TCCTCTGCCAAATCTTCTGT+TGG 0.537162 3_1:+92454773 Msa0388140:five_prime_UTR
TTGCTTCTGGGTAGTAGTAG+TGG 0.537840 3_1:-92454587 None:intergenic
TATTGAGCAGATTGAAGAGC+TGG 0.537900 3_1:-92457456 None:intergenic
GACAGATATCAACAAGGTTG+AGG 0.540048 3_1:+92456133 Msa0388140:CDS
AAAGAAACAGCGTGTGAACT+GGG 0.540068 3_1:+92456725 Msa0388140:CDS
GCAAGGAAAATGTCATTCCA+TGG 0.542001 3_1:+92456463 Msa0388140:CDS
GTTATGGTTGAATTGAAGGC+AGG 0.542299 3_1:-92454471 None:intergenic
AACTGACAGTTGGTATATCA+GGG 0.544589 3_1:+92457119 Msa0388140:CDS
TTGATTACAACAATATTCAC+AGG 0.547172 3_1:+92457154 Msa0388140:CDS
TTCTAAAGATAGCTGATGTA+GGG 0.547691 3_1:+92456957 Msa0388140:CDS
AAATTATTTGATAGTAGAGA+GGG 0.548285 3_1:+92457001 Msa0388140:CDS
CGATATAATATCAAAACCAA+TGG 0.548953 3_1:+92456079 Msa0388140:CDS
AGTTAGCAAAATTTGGATAG+GGG 0.555283 3_1:+92456103 Msa0388140:CDS
GATATGCACTTGCACTGGAG+TGG 0.555354 3_1:+92456395 Msa0388140:CDS
GACATCCTTGTGTTGGCTGA+GGG 0.561266 3_1:+92455498 Msa0388140:CDS
GGAATAGAAGTGCCGGTAGA+CGG 0.562622 3_1:+92456746 Msa0388140:CDS
TGACACTGACATCCTTGTGT+TGG 0.563044 3_1:+92455491 Msa0388140:CDS
TGATATTGTGGTGGGTGACA+TGG 0.563185 3_1:+92455416 Msa0388140:CDS
GATGGTGCCAACATAGAACT+TGG 0.564084 3_1:+92454541 Msa0388140:five_prime_UTR
ATTCAACTTCAACTGACAGT+TGG 0.564810 3_1:+92457109 Msa0388140:CDS
GCAGCATTGAAATTGTGTAA+AGG 0.566013 3_1:-92455158 None:intergenic
ACCCACCACAATATCAGATA+CGG 0.566639 3_1:-92455409 None:intergenic
CTCACAAGCAAACCATCTGC+AGG 0.569043 3_1:-92455465 None:intergenic
GATTCTAACCAAGAGGGTGG+TGG 0.569132 3_1:+92456338 Msa0388140:CDS
AATACAAAATCATTGAGTTG+AGG 0.569223 3_1:-92454227 None:intergenic
AACAGAAGATTTGGCAGAGG+AGG 0.570745 3_1:-92454771 None:intergenic
AACTTGTACAACAATGGGGT+TGG 0.570757 3_1:+92456028 Msa0388140:CDS
AACGAATTGGACAGAGGCGA+AGG 0.571944 3_1:-92456233 None:intergenic
GTTGGCACCATCTGATTCCA+AGG 0.572139 3_1:-92454530 None:intergenic
AAGACAAGCTTCTCATGGTA+CGG 0.575385 3_1:+92456861 Msa0388140:CDS
TCATTCCCTCAGCCAACACA+AGG 0.579377 3_1:-92455503 None:intergenic
TATTAACTGGTATACATACC+TGG 0.580002 3_1:-92457864 None:intergenic
TGACATCCTTGTGTTGGCTG+AGG 0.580874 3_1:+92455497 Msa0388140:CDS
CTGCATAATACTTGAATTTG+GGG 0.581948 3_1:+92457369 Msa0388140:CDS
TCCTGAAGACAAGCTTCTCA+TGG 0.582293 3_1:+92456856 Msa0388140:CDS
CCAGAATGATAAGGTAGTGT+CGG 0.582609 3_1:+92455977 Msa0388140:CDS
ACTGAAGCTTCCCATTGCAA+TGG 0.583069 3_1:-92456834 None:intergenic
GAGACCTACCAGTGCTAACA+AGG 0.584411 3_1:-92456603 None:intergenic
GCGGCTGAATGCCACTGGAT+GGG 0.584874 3_1:+92457609 Msa0388140:CDS
TATACCCTCTCATACTCTTG+AGG 0.587503 3_1:+92454802 Msa0388140:five_prime_UTR
GCCACAGAGTTCAAGCAGGA+GGG 0.589445 3_1:+92455204 Msa0388140:CDS
ATTTCTTATAGCTGGCTCAA+AGG 0.589501 3_1:+92455557 Msa0388140:CDS
CTTCAATCTGCTCAATACCA+TGG 0.590050 3_1:+92457462 Msa0388140:CDS
TGAACTGGGAATAGAAGTGC+CGG 0.591430 3_1:+92456739 Msa0388140:CDS
TTAATACCTGCTAGTCCTAG+AGG 0.591781 3_1:-92457805 None:intergenic
GCAGAGGAGGTTCTAGCAGG+AGG 0.592342 3_1:-92454758 None:intergenic
TGCCACAGAGTTCAAGCAGG+AGG 0.593164 3_1:+92455203 Msa0388140:CDS
ACTGAAGAGAGTGGTGATGG+TGG 0.593595 3_1:-92454710 None:intergenic
TGTGTTCTCAGTACTACGAT+AGG 0.595126 3_1:+92456441 Msa0388140:CDS
GGTGATGGAATTAAGTAGCG+AGG 0.597039 3_1:+92457249 Msa0388140:CDS
GCTAGCACCAAGTTCTATGT+TGG 0.597363 3_1:-92454548 None:intergenic
GTTCTAGCAGGAGGACTAGG+AGG 0.597398 3_1:-92454749 None:intergenic
GCAGATGGTTTGCTTGTGAG+TGG 0.598056 3_1:+92455468 Msa0388140:CDS
AAGGGCTAGCATATTGCATG+CGG 0.598780 3_1:+92457590 Msa0388140:CDS
GGGTGGCCTAATGATGGTGA+TGG 0.599957 3_1:+92457234 Msa0388140:CDS
TGCGCTGAAACCAATTGTGA+AGG 0.600304 3_1:+92457051 Msa0388140:CDS
GGTACTGAAGAGAGTGGTGA+TGG 0.600448 3_1:-92454713 None:intergenic
AAGAGAAGCTTTGTCAAGGT+AGG 0.601482 3_1:-92455712 None:intergenic
TTGGCATGATGGTGTTGCCA+TGG 0.602083 3_1:+92455239 Msa0388140:CDS
AGGAGGGACCCAAATATGGT+TGG 0.602696 3_1:+92455220 Msa0388140:CDS
TGGTTATTGAGTATGCAAAA+GGG 0.603051 3_1:+92457572 Msa0388140:CDS
TCCCTCCTGCTTGAACTCTG+TGG 0.606009 3_1:-92455205 None:intergenic
ACTGGGTAAAGCCATTGCAA+TGG 0.606836 3_1:+92456823 Msa0388140:CDS
CTTTGCCACAGAGTTCAAGC+AGG 0.607083 3_1:+92455200 Msa0388140:CDS
GTTGACTCTGGAGAGTCCAG+GGG 0.607262 3_1:-92457724 None:intergenic
AAATAGGCTTAGGTGTTAGG+TGG 0.608376 3_1:-92454309 None:intergenic
TGCCAGAGAAGCTTATTCCA+AGG 0.608929 3_1:-92455110 None:intergenic
CTATTTGAATCCCCATGATG+AGG 0.609805 3_1:+92455440 Msa0388140:CDS
TCAAAGGTGATTGAAGGTAA+TGG 0.610339 3_1:+92455573 Msa0388140:CDS
AAAATAGAATAAAGGTTGTG+GGG 0.610868 3_1:-92457746 None:intergenic
AATTGAAGGCAGGAAGAACA+AGG 0.610930 3_1:-92454461 None:intergenic
ACACAAAATCTGGTCTAACA+AGG 0.612933 3_1:-92454267 None:intergenic
TAGCAAAATTTGGATAGGGG+AGG 0.614765 3_1:+92456106 Msa0388140:CDS
GGTCTCGACAGATGACATCA+TGG 0.618282 3_1:+92456697 Msa0388140:CDS
GCCGTATCTGATATTGTGGT+GGG 0.619291 3_1:+92455408 Msa0388140:CDS
TCTTGCCGTATCTGATATTG+TGG 0.621708 3_1:+92455404 Msa0388140:CDS
AAGAAATAATCATATCACAA+AGG 0.627764 3_1:+92454420 Msa0388140:five_prime_UTR
ACCAACAGAAGATTTGGCAG+AGG 0.628274 3_1:-92454774 None:intergenic
AGTTGACAAATCATAAAGAA+CGG 0.628280 3_1:-92456009 None:intergenic
GTCCAGGGGTGAAGTATCAG+TGG 0.631086 3_1:-92457710 None:intergenic
AAAGCTAGATTAGTCAAACT+GGG 0.633615 3_1:+92456806 Msa0388140:CDS
TAATACCTGCTAGTCCTAGA+GGG 0.633974 3_1:-92457804 None:intergenic
TTGACCTTGTTAGCACTGGT+AGG 0.634098 3_1:+92456599 Msa0388140:CDS
ACCCTCTCATACTCTTGAGG+GGG 0.635260 3_1:+92454805 Msa0388140:five_prime_UTR
TACCCTCTCATACTCTTGAG+GGG 0.636483 3_1:+92454804 Msa0388140:five_prime_UTR
CTTCTGGGTAGTAGTAGTGG+TGG 0.638797 3_1:-92454584 None:intergenic
AGGTGATTGAAGGTAATGGT+TGG 0.640188 3_1:+92455577 Msa0388140:CDS
TATGCACTTGCACTGGAGTG+GGG 0.642956 3_1:+92456397 Msa0388140:CDS
AACACAAATGGCCCATCCAG+TGG 0.645739 3_1:-92457620 None:intergenic
GTACTTGACAAGCTTAAACA+AGG 0.646690 3_1:+92456176 Msa0388140:CDS
GTCTTGAGAAAATATTCCCA+AGG 0.648533 3_1:-92455857 None:intergenic
ACAGGTGATTCAAGATATGG+AGG 0.649427 3_1:+92456508 Msa0388140:CDS
TTATGGAACAGAAAATCACT+AGG 0.651086 3_1:+92455085 Msa0388140:intron
TCGAACTCGACAGAGATGAA+GGG 0.652665 3_1:+92455627 Msa0388140:CDS
TTTGCAAGATAAAGGTGATG+TGG 0.656431 3_1:+92456886 Msa0388140:CDS
TAGGTTTCTTCAAGGAGACG+AGG 0.656432 3_1:-92454649 None:intergenic
TCAGAAGCACTGTTTCTCAG+TGG 0.656448 3_1:+92457519 Msa0388140:CDS
TGCATAATACTTGAATTTGG+GGG 0.659973 3_1:+92457370 Msa0388140:CDS
TCTCAGTACTACGATAGGCA+AGG 0.663522 3_1:+92456446 Msa0388140:CDS
AGCATGTCCTTGGAATCAGA+TGG 0.667294 3_1:+92454523 Msa0388140:five_prime_UTR
CAAACTGGATTCTAACCAAG+AGG 0.668794 3_1:+92456331 Msa0388140:CDS
AGGAGGACTAGGAGGCACTG+AGG 0.676943 3_1:-92454741 None:intergenic
TCAAAGTCAATACTCATCAG+AGG 0.677618 3_1:+92454913 Msa0388140:five_prime_UTR
AAACTGGATTCTAACCAAGA+GGG 0.678291 3_1:+92456332 Msa0388140:CDS
CTGGATTCTAACCAAGAGGG+TGG 0.678970 3_1:+92456335 Msa0388140:CDS
TCTGCAGGAACCTCATCATG+GGG 0.684097 3_1:-92455450 None:intergenic
TGTCAACTTGTACAACAATG+GGG 0.687555 3_1:+92456024 Msa0388140:CDS
GAAACAAACGAATTGGACAG+AGG 0.690107 3_1:-92456239 None:intergenic
GCGCTAATGTGTCTTCTGGG+TGG 0.696956 3_1:+92457217 Msa0388140:CDS
GTGTATGGTACTGAAGAGAG+TGG 0.702279 3_1:-92454719 None:intergenic
GTAATACTGTGTGTGCAACA+TGG 0.713121 3_1:+92455921 Msa0388140:CDS
AAAATCGAAATCCTTCCTCG+TGG 0.713589 3_1:-92455879 None:intergenic
AAGTAGAAGAGCAAACACCA+TGG 0.723593 3_1:-92455256 None:intergenic
CAGAGATGAAGGGCTCAATG+GGG 0.725699 3_1:+92455637 Msa0388140:CDS
GGCGGAGACAGATATCAACA+AGG 0.742179 3_1:+92456127 Msa0388140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACTCAATAAAATTTAGTT+TGG - chr3_1:92454981-92455000 None:intergenic 15.0%
!!! CTAAATTTTATTGAGTAAAA+AGG + chr3_1:92454983-92455002 Msa0388140:intron 15.0%
!!! AACCTTTATTCTATTTTTAT+TGG + chr3_1:92457752-92457771 Msa0388140:CDS 15.0%
!!! ACCTTTATTCTATTTTTATT+GGG + chr3_1:92457753-92457772 Msa0388140:CDS 15.0%
!! TAGTTATCAAAAAAGGAAAT+GGG - chr3_1:92454135-92454154 None:intergenic 20.0%
!! TTAGTTATCAAAAAAGGAAA+TGG - chr3_1:92454136-92454155 None:intergenic 20.0%
!! AAGAAATAATCATATCACAA+AGG + chr3_1:92454420-92454439 Msa0388140:five_prime_UTR 20.0%
!!! TTTTATTGAGTAAAAAGGAA+AGG + chr3_1:92454988-92455007 Msa0388140:intron 20.0%
!! AAATGAAAAAATTGATTGTG+AGG + chr3_1:92455527-92455546 Msa0388140:CDS 20.0%
!! ACATTATTACCTTTAATATC+TGG - chr3_1:92455813-92455832 None:intergenic 20.0%
!! GAAAATCAGAAAATCAAATA+TGG + chr3_1:92456485-92456504 Msa0388140:CDS 20.0%
!!! AAATTATTTGATAGTAGAGA+GGG + chr3_1:92457001-92457020 Msa0388140:CDS 20.0%
!! TGATTATAACCAAGAAAATA+TGG + chr3_1:92457308-92457327 Msa0388140:CDS 20.0%
!!! AATGTTTTTCCATATTTTCT+TGG - chr3_1:92457320-92457339 None:intergenic 20.0%
!! AAAAATAGAATAAAGGTTGT+GGG - chr3_1:92457750-92457769 None:intergenic 20.0%
!! TAAAAATAGAATAAAGGTTG+TGG - chr3_1:92457751-92457770 None:intergenic 20.0%
!!! CCTTTATTCTATTTTTATTG+GGG + chr3_1:92457754-92457773 Msa0388140:CDS 20.0%
!!! CTTTATTCTATTTTTATTGG+GGG + chr3_1:92457755-92457774 Msa0388140:CDS 20.0%
! GATGGTTTAGTTATCAAAAA+AGG - chr3_1:92454142-92454161 None:intergenic 25.0%
!! AATACAAAATCATTGAGTTG+AGG - chr3_1:92454230-92454249 None:intergenic 25.0%
! AACAAGGAAGAAAAAATGTT+TGG - chr3_1:92454254-92454273 None:intergenic 25.0%
!!! ATTTAGTTTGGTAACCAAAA+AGG - chr3_1:92454969-92454988 None:intergenic 25.0%
!!! GAACTATTTTGTTTTGTTGA+TGG + chr3_1:92455052-92455071 Msa0388140:intron 25.0%
!!! TTGTTTTGTTGATGGAATTT+TGG + chr3_1:92455060-92455079 Msa0388140:intron 25.0%
!!! TTGATGGAATTTTGGTTTTA+TGG + chr3_1:92455068-92455087 Msa0388140:intron 25.0%
!!! CCACATCTTTTTTACATATT+AGG - chr3_1:92455776-92455795 None:intergenic 25.0%
! CCTAATATGTAAAAAAGATG+TGG + chr3_1:92455773-92455792 Msa0388140:CDS 25.0%
! ATATGTAAAAAAGATGTGGA+TGG + chr3_1:92455777-92455796 Msa0388140:CDS 25.0%
! AAAGGTAATAATGTTTCAGT+TGG + chr3_1:92455819-92455838 Msa0388140:CDS 25.0%
! AGTTGACAAATCATAAAGAA+CGG - chr3_1:92456012-92456031 None:intergenic 25.0%
! CGATATAATATCAAAACCAA+TGG + chr3_1:92456079-92456098 Msa0388140:CDS 25.0%
! AAGTTAGCAAAATTTGGATA+GGG + chr3_1:92456102-92456121 Msa0388140:CDS 25.0%
!! AATTTTCACATTCTTGAACA+TGG + chr3_1:92456308-92456327 Msa0388140:CDS 25.0%
!!! TTTGATTTTCTGATTTTCCA+TGG - chr3_1:92456483-92456502 None:intergenic 25.0%
! TTGAAAAATCTGCAAAATGA+TGG + chr3_1:92456659-92456678 Msa0388140:CDS 25.0%
! TGATGGAATACATATCAAAT+TGG + chr3_1:92456676-92456695 Msa0388140:CDS 25.0%
!! CAAATTATTTGATAGTAGAG+AGG + chr3_1:92457000-92457019 Msa0388140:CDS 25.0%
! TGTGAATATTGTTGTAATCA+AGG - chr3_1:92457155-92457174 None:intergenic 25.0%
! TTGATTACAACAATATTCAC+AGG + chr3_1:92457154-92457173 Msa0388140:CDS 25.0%
! TAACAGAAATCCAATTGATT+TGG + chr3_1:92457188-92457207 Msa0388140:CDS 25.0%
!! AACAGAAATCCAATTGATTT+GGG + chr3_1:92457189-92457208 Msa0388140:CDS 25.0%
!!! ATGGAAAAACATTGTTTTTC+AGG + chr3_1:92457327-92457346 Msa0388140:CDS 25.0%
! AAAATAGAATAAAGGTTGTG+GGG - chr3_1:92457749-92457768 None:intergenic 25.0%
! CCCCAATAAAAATAGAATAA+AGG - chr3_1:92457757-92457776 None:intergenic 25.0%
!!! AACAAAAGAAGCATCATAAA+TGG - chr3_1:92457784-92457803 None:intergenic 25.0%
! TGTATACCAGTTAATAGTTT+AGG + chr3_1:92457871-92457890 Msa0388140:three_prime_UTR 25.0%
TTAAGCAAAAATGGAAGTGA+TGG - chr3_1:92454160-92454179 None:intergenic 30.0%
!! TTGGAAGTGTTAAGCAAAAA+TGG - chr3_1:92454169-92454188 None:intergenic 30.0%
CTCATACAATTAACATCAGT+TGG - chr3_1:92454188-92454207 None:intergenic 30.0%
GAGAATTTACACACAAAATC+TGG - chr3_1:92454280-92454299 None:intergenic 30.0%
ATTATGGTATGTGTCCAAAT+AGG - chr3_1:92454328-92454347 None:intergenic 30.0%
! CTGTTTTCAGACATTCATTA+TGG - chr3_1:92454344-92454363 None:intergenic 30.0%
TTTGTTAGTTGTGACAGTTA+TGG - chr3_1:92454490-92454509 None:intergenic 30.0%
ATCAATACCAACAGAAGATT+TGG - chr3_1:92454783-92454802 None:intergenic 30.0%
TGCTGAAATTGTGAAAAAGA+AGG + chr3_1:92454832-92454851 Msa0388140:five_prime_UTR 30.0%
! ATAGTTTGTGATGTTCTTCA+TGG + chr3_1:92454890-92454909 Msa0388140:five_prime_UTR 30.0%
!!! ATTTGCTGTTAGATCCTTTT+TGG + chr3_1:92454952-92454971 Msa0388140:intron 30.0%
GGAAAGGATTTATTTACCAA+CGG + chr3_1:92455004-92455023 Msa0388140:intron 30.0%
TTATGGAACAGAAAATCACT+AGG + chr3_1:92455085-92455104 Msa0388140:intron 30.0%
!! AATTTCAATGCTGCTGATTT+CGG + chr3_1:92455167-92455186 Msa0388140:exon 30.0%
! TCCTAAAAAAAGAGGACTTT+TGG + chr3_1:92455665-92455684 Msa0388140:CDS 30.0%
!!! TCCAAAAGTCCTCTTTTTTT+AGG - chr3_1:92455669-92455688 None:intergenic 30.0%
! TAAAAAGAGAAGCTTTGTCA+AGG - chr3_1:92455719-92455738 None:intergenic 30.0%
AGAGAAAGAGTAACCATAAT+TGG - chr3_1:92455951-92455970 None:intergenic 30.0%
TTTGTCAACTTGTACAACAA+TGG + chr3_1:92456022-92456041 Msa0388140:CDS 30.0%
TTGTCAACTTGTACAACAAT+GGG + chr3_1:92456023-92456042 Msa0388140:CDS 30.0%
! CAAATTTTGCTAACTTCCAT+TGG - chr3_1:92456098-92456117 None:intergenic 30.0%
CAATGGAAGTTAGCAAAATT+TGG + chr3_1:92456096-92456115 Msa0388140:CDS 30.0%
GAAGTTAGCAAAATTTGGAT+AGG + chr3_1:92456101-92456120 Msa0388140:CDS 30.0%
AGTTAGCAAAATTTGGATAG+GGG + chr3_1:92456103-92456122 Msa0388140:CDS 30.0%
AGAACACATTTCCAATATTG+TGG - chr3_1:92456429-92456448 None:intergenic 30.0%
TCAGAAAATCAAATATGGAC+AGG + chr3_1:92456490-92456509 Msa0388140:CDS 30.0%
ATTCAAGATATGGAGGATAA+TGG + chr3_1:92456515-92456534 Msa0388140:CDS 30.0%
AAAGAACTTCAAGACTTGAA+TGG + chr3_1:92456782-92456801 Msa0388140:CDS 30.0%
! AAAGCTAGATTAGTCAAACT+GGG + chr3_1:92456806-92456825 Msa0388140:CDS 30.0%
! TTCTAAAGATAGCTGATGTA+GGG + chr3_1:92456957-92456976 Msa0388140:CDS 30.0%
ATCAATTGGATTTCTGTTAG+AGG - chr3_1:92457187-92457206 None:intergenic 30.0%
TTAATTCCATCACCATCATT+AGG - chr3_1:92457243-92457262 None:intergenic 30.0%
TTGTCAAACAACCATATGAT+AGG + chr3_1:92457278-92457297 Msa0388140:CDS 30.0%
! ATCAGTTGATTCCTATCATA+TGG - chr3_1:92457292-92457311 None:intergenic 30.0%
!!! TGTTTTTCAGGTTTTGTATC+AGG + chr3_1:92457339-92457358 Msa0388140:CDS 30.0%
CCTGCATAATACTTGAATTT+GGG + chr3_1:92457368-92457387 Msa0388140:CDS 30.0%
CTGCATAATACTTGAATTTG+GGG + chr3_1:92457369-92457388 Msa0388140:CDS 30.0%
TGCATAATACTTGAATTTGG+GGG + chr3_1:92457370-92457389 Msa0388140:CDS 30.0%
GAAGAATGTATTGAAGATCA+TGG - chr3_1:92457431-92457450 None:intergenic 30.0%
TTCTGCTTTCAAAAAATCCA+TGG - chr3_1:92457482-92457501 None:intergenic 30.0%
TGGTTATTGAGTATGCAAAA+GGG + chr3_1:92457572-92457591 Msa0388140:CDS 30.0%
TATTAACTGGTATACATACC+TGG - chr3_1:92457867-92457886 None:intergenic 30.0%
GAATCACCTAAACTATTAAC+TGG - chr3_1:92457880-92457899 None:intergenic 30.0%
ATCAAAAAAGGAAATGGGAG+TGG - chr3_1:92454130-92454149 None:intergenic 35.0%
ACACAAAATCTGGTCTAACA+AGG - chr3_1:92454270-92454289 None:intergenic 35.0%
GACAGTTATGGTTGAATTGA+AGG - chr3_1:92454478-92454497 None:intergenic 35.0%
TGGCGTAAAAGCTTATACAT+AGG + chr3_1:92454623-92454642 Msa0388140:five_prime_UTR 35.0%
AGAAGTTGTAGGTTTCTTCA+AGG - chr3_1:92454660-92454679 None:intergenic 35.0%
! TAGTTTGCACTAGAAGTTGT+AGG - chr3_1:92454671-92454690 None:intergenic 35.0%
TTGAAATCTCTTCTTGAGCT+TGG + chr3_1:92454857-92454876 Msa0388140:five_prime_UTR 35.0%
TCAAAGTCAATACTCATCAG+AGG + chr3_1:92454913-92454932 Msa0388140:five_prime_UTR 35.0%
AACAGCAAATGAAGAGGATT+AGG - chr3_1:92454942-92454961 None:intergenic 35.0%
AAGCATTCAAAAACAACCGT+TGG - chr3_1:92455023-92455042 None:intergenic 35.0%
! GCAGCATTGAAATTGTGTAA+AGG - chr3_1:92455161-92455180 None:intergenic 35.0%
ATGAAGCTGGCAAAGAAAAA+AGG + chr3_1:92455327-92455346 Msa0388140:CDS 35.0%
AAGAGCAAGATTTACAGCTT+GGG - chr3_1:92455388-92455407 None:intergenic 35.0%
TTGAGCCAGCTATAAGAAAT+GGG - chr3_1:92455557-92455576 None:intergenic 35.0%
TTTGAGCCAGCTATAAGAAA+TGG - chr3_1:92455558-92455577 None:intergenic 35.0%
! ATTTCTTATAGCTGGCTCAA+AGG + chr3_1:92455557-92455576 Msa0388140:CDS 35.0%
TCAAAGGTGATTGAAGGTAA+TGG + chr3_1:92455573-92455592 Msa0388140:CDS 35.0%
TGTAAAAAAGATGTGGATGG+TGG + chr3_1:92455780-92455799 Msa0388140:CDS 35.0%
! TGTTTCAGTTGGCTTATTGA+CGG + chr3_1:92455830-92455849 Msa0388140:CDS 35.0%
GTCTTGAGAAAATATTCCCA+AGG - chr3_1:92455860-92455879 None:intergenic 35.0%
! AATATTTTCTCAAGACCACG+AGG + chr3_1:92455864-92455883 Msa0388140:CDS 35.0%
TCTCCATTACCAGAATGATA+AGG + chr3_1:92455968-92455987 Msa0388140:CDS 35.0%
CTACCTTATCATTCTGGTAA+TGG - chr3_1:92455974-92455993 None:intergenic 35.0%
TGTCAACTTGTACAACAATG+GGG + chr3_1:92456024-92456043 Msa0388140:CDS 35.0%
GTACTTGACAAGCTTAAACA+AGG + chr3_1:92456176-92456195 Msa0388140:CDS 35.0%
TTTCCTTGGCAGAAAAAACA+TGG + chr3_1:92456258-92456277 Msa0388140:CDS 35.0%
!!! TTTCCATGTTTTTTCTGCCA+AGG - chr3_1:92456264-92456283 None:intergenic 35.0%
GGCAGAAAAAACATGGAAAA+TGG + chr3_1:92456265-92456284 Msa0388140:CDS 35.0%
AAACTGGATTCTAACCAAGA+GGG + chr3_1:92456332-92456351 Msa0388140:CDS 35.0%
!! AGTTTTGGTGAGAGATGTTA+GGG + chr3_1:92456361-92456380 Msa0388140:CDS 35.0%
TGTCTATAAGCAAGTGCAAT+TGG - chr3_1:92456548-92456567 None:intergenic 35.0%
! CTTGAAGTTCTTTTCCTTCA+AGG - chr3_1:92456775-92456794 None:intergenic 35.0%
! CAAAGCTAGATTAGTCAAAC+TGG + chr3_1:92456805-92456824 Msa0388140:CDS 35.0%
TTTGCAAGATAAAGGTGATG+TGG + chr3_1:92456886-92456905 Msa0388140:CDS 35.0%
!! GTTCTAAAGATAGCTGATGT+AGG + chr3_1:92456956-92456975 Msa0388140:CDS 35.0%
ATTGTGATATTCACTTCTGC+CGG - chr3_1:92457077-92457096 None:intergenic 35.0%
ATTCAACTTCAACTGACAGT+TGG + chr3_1:92457109-92457128 Msa0388140:CDS 35.0%
! AACTGACAGTTGGTATATCA+GGG + chr3_1:92457119-92457138 Msa0388140:CDS 35.0%
GCCTGCATAATACTTGAATT+TGG + chr3_1:92457367-92457386 Msa0388140:CDS 35.0%
CCCAAATTCAAGTATTATGC+AGG - chr3_1:92457371-92457390 None:intergenic 35.0%
CTGACAGAGAAAAACAAGTA+AGG + chr3_1:92457401-92457420 Msa0388140:CDS 35.0%
!! AGGTAGTTGTTTTGTTATGC+AGG + chr3_1:92457546-92457565 Msa0388140:CDS 35.0%
!! TTGTTTTGTTATGCAGGTAG+TGG + chr3_1:92457552-92457571 Msa0388140:CDS 35.0%
GTGGTTATTGAGTATGCAAA+AGG + chr3_1:92457571-92457590 Msa0388140:CDS 35.0%
!!! TTATGGTTGGTGCTTTTTCA+TGG + chr3_1:92457641-92457660 Msa0388140:CDS 35.0%
!!! TATGGTTGGTGCTTTTTCAT+GGG + chr3_1:92457642-92457661 Msa0388140:CDS 35.0%
!! CTTTTTCATGGGTACTTGAA+TGG + chr3_1:92457653-92457672 Msa0388140:CDS 35.0%
CATCTTAATGTAATAGTGCC+AGG + chr3_1:92457846-92457865 Msa0388140:three_prime_UTR 35.0%
AAATAGGCTTAGGTGTTAGG+TGG - chr3_1:92454312-92454331 None:intergenic 40.0%
ACCTAACACCTAAGCCTATT+TGG + chr3_1:92454311-92454330 Msa0388140:five_prime_UTR 40.0%
TCCAAATAGGCTTAGGTGTT+AGG - chr3_1:92454315-92454334 None:intergenic 40.0%
GTATGTGTCCAAATAGGCTT+AGG - chr3_1:92454322-92454341 None:intergenic 40.0%
AATTGAAGGCAGGAAGAACA+AGG - chr3_1:92454464-92454483 None:intergenic 40.0%
GTTATGGTTGAATTGAAGGC+AGG - chr3_1:92454474-92454493 None:intergenic 40.0%
! TTCTTGCTGTACTTGCTTCT+GGG - chr3_1:92454602-92454621 None:intergenic 40.0%
! TTTCTTGCTGTACTTGCTTC+TGG - chr3_1:92454603-92454622 None:intergenic 40.0%
GAAGCAAGTACAGCAAGAAA+TGG + chr3_1:92454603-92454622 Msa0388140:five_prime_UTR 40.0%
TATACCCTCTCATACTCTTG+AGG + chr3_1:92454802-92454821 Msa0388140:five_prime_UTR 40.0%
ATACCCTCTCATACTCTTGA+GGG + chr3_1:92454803-92454822 Msa0388140:five_prime_UTR 40.0%
AAATCTCTTCTTGAGCTTGG+TGG + chr3_1:92454860-92454879 Msa0388140:five_prime_UTR 40.0%
AATCTCTTCTTGAGCTTGGT+GGG + chr3_1:92454861-92454880 Msa0388140:five_prime_UTR 40.0%
GGATCTAACAGCAAATGAAG+AGG - chr3_1:92454948-92454967 None:intergenic 40.0%
CAGAAAATCACTAGGAACCT+TGG + chr3_1:92455093-92455112 Msa0388140:intron 40.0%
AACCTTGGAATAAGCTTCTC+TGG + chr3_1:92455108-92455127 Msa0388140:five_prime_UTR 40.0%
TAAGCTTCTCTGGCATTCTA+TGG + chr3_1:92455118-92455137 Msa0388140:five_prime_UTR 40.0%
CCATCATGCCAACCATATTT+GGG - chr3_1:92455231-92455250 None:intergenic 40.0%
ACCATCATGCCAACCATATT+TGG - chr3_1:92455232-92455251 None:intergenic 40.0%
AAGTAGAAGAGCAAACACCA+TGG - chr3_1:92455259-92455278 None:intergenic 40.0%
!! GCTTCATCATTTTTCGCTCA+CGG - chr3_1:92455314-92455333 None:intergenic 40.0%
TGAGCGAAAAATGATGAAGC+TGG + chr3_1:92455314-92455333 Msa0388140:CDS 40.0%
CAAGAGCAAGATTTACAGCT+TGG - chr3_1:92455389-92455408 None:intergenic 40.0%
TCTTGCCGTATCTGATATTG+TGG + chr3_1:92455404-92455423 Msa0388140:CDS 40.0%
ACCCACCACAATATCAGATA+CGG - chr3_1:92455412-92455431 None:intergenic 40.0%
CTATTTGAATCCCCATGATG+AGG + chr3_1:92455440-92455459 Msa0388140:CDS 40.0%
GAGAACCCATTTCTTATAGC+TGG + chr3_1:92455549-92455568 Msa0388140:CDS 40.0%
! AGGTGATTGAAGGTAATGGT+TGG + chr3_1:92455577-92455596 Msa0388140:CDS 40.0%
! TCTGTCGAGTTCGATTTGTT+TGG - chr3_1:92455621-92455640 None:intergenic 40.0%
GGGCATCATCCTAAAAAAAG+AGG + chr3_1:92455657-92455676 Msa0388140:CDS 40.0%
GCTTTGTCAAGGTAGGAAAT+TGG - chr3_1:92455708-92455727 None:intergenic 40.0%
! AAGAGAAGCTTTGTCAAGGT+AGG - chr3_1:92455715-92455734 None:intergenic 40.0%
! AAAAAAGATGTGGATGGTGG+AGG + chr3_1:92455783-92455802 Msa0388140:CDS 40.0%
!! AAAAAGATGTGGATGGTGGA+GGG + chr3_1:92455784-92455803 Msa0388140:CDS 40.0%
AAAATCGAAATCCTTCCTCG+TGG - chr3_1:92455882-92455901 None:intergenic 40.0%
! ACGAGGAAGGATTTCGATTT+TGG + chr3_1:92455881-92455900 Msa0388140:CDS 40.0%
GTAATACTGTGTGTGCAACA+TGG + chr3_1:92455921-92455940 Msa0388140:CDS 40.0%
CCAGAATGATAAGGTAGTGT+CGG + chr3_1:92455977-92455996 Msa0388140:CDS 40.0%
AACTTGTACAACAATGGGGT+TGG + chr3_1:92456028-92456047 Msa0388140:CDS 40.0%
! GTCATCTGCATTGATGTATC+TGG + chr3_1:92456056-92456075 Msa0388140:CDS 40.0%
TAGCAAAATTTGGATAGGGG+AGG + chr3_1:92456106-92456125 Msa0388140:CDS 40.0%
GACAGATATCAACAAGGTTG+AGG + chr3_1:92456133-92456152 Msa0388140:CDS 40.0%
GACAAGCTTAAACAAGGAGT+TGG + chr3_1:92456182-92456201 Msa0388140:CDS 40.0%
GAAACAAACGAATTGGACAG+AGG - chr3_1:92456242-92456261 None:intergenic 40.0%
GTCCAATTCGTTTGTTTCCT+TGG + chr3_1:92456244-92456263 Msa0388140:CDS 40.0%
TGCCAAGGAAACAAACGAAT+TGG - chr3_1:92456249-92456268 None:intergenic 40.0%
CATTCTTGAACATGGCAAAC+TGG + chr3_1:92456316-92456335 Msa0388140:CDS 40.0%
CAAACTGGATTCTAACCAAG+AGG + chr3_1:92456331-92456350 Msa0388140:CDS 40.0%
!! GAGTTTTGGTGAGAGATGTT+AGG + chr3_1:92456360-92456379 Msa0388140:CDS 40.0%
AACAAGATATGCACTTGCAC+TGG + chr3_1:92456390-92456409 Msa0388140:CDS 40.0%
TGTGTTCTCAGTACTACGAT+AGG + chr3_1:92456441-92456460 Msa0388140:CDS 40.0%
GCAAGGAAAATGTCATTCCA+TGG + chr3_1:92456463-92456482 Msa0388140:CDS 40.0%
TGGACAGGTGATTCAAGATA+TGG + chr3_1:92456505-92456524 Msa0388140:CDS 40.0%
ACAGGTGATTCAAGATATGG+AGG + chr3_1:92456508-92456527 Msa0388140:CDS 40.0%
! AAGCAAGTGCAATTGGCTTA+AGG - chr3_1:92456541-92456560 None:intergenic 40.0%
TGAATTGACCTTGTTAGCAC+TGG + chr3_1:92456595-92456614 Msa0388140:CDS 40.0%
AAAGAAACAGCGTGTGAACT+GGG + chr3_1:92456725-92456744 Msa0388140:CDS 40.0%
AAGACAAGCTTCTCATGGTA+CGG + chr3_1:92456861-92456880 Msa0388140:CDS 40.0%
GTACGGTGTTTGCAAGATAA+AGG + chr3_1:92456878-92456897 Msa0388140:CDS 40.0%
! TTTGATAGTAGAGAGGGTTC+TGG + chr3_1:92457007-92457026 Msa0388140:CDS 40.0%
! CAACTGACAGTTGGTATATC+AGG + chr3_1:92457118-92457137 Msa0388140:CDS 40.0%
AATGCGCTAATGTGTCTTCT+GGG + chr3_1:92457214-92457233 Msa0388140:CDS 40.0%
TATTGAGCAGATTGAAGAGC+TGG - chr3_1:92457459-92457478 None:intergenic 40.0%
CTTCAATCTGCTCAATACCA+TGG + chr3_1:92457462-92457481 Msa0388140:CDS 40.0%
AGCACCAACCATAACACAAA+TGG - chr3_1:92457635-92457654 None:intergenic 40.0%
! ATGCTTCTTTTGTTCCCTCT+AGG + chr3_1:92457790-92457809 Msa0388140:CDS 40.0%
TAATACCTGCTAGTCCTAGA+GGG - chr3_1:92457807-92457826 None:intergenic 40.0%
TTAATACCTGCTAGTCCTAG+AGG - chr3_1:92457808-92457827 None:intergenic 40.0%
TCTGATTCCAAGGACATGCT+TGG - chr3_1:92454523-92454542 None:intergenic 45.0%
AGCATGTCCTTGGAATCAGA+TGG + chr3_1:92454523-92454542 Msa0388140:five_prime_UTR 45.0%
! GATGGTGCCAACATAGAACT+TGG + chr3_1:92454541-92454560 Msa0388140:five_prime_UTR 45.0%
GCTAGCACCAAGTTCTATGT+TGG - chr3_1:92454551-92454570 None:intergenic 45.0%
TTGCTTCTGGGTAGTAGTAG+TGG - chr3_1:92454590-92454609 None:intergenic 45.0%
TAGGTTTCTTCAAGGAGACG+AGG - chr3_1:92454652-92454671 None:intergenic 45.0%
! GTGTATGGTACTGAAGAGAG+TGG - chr3_1:92454722-92454741 None:intergenic 45.0%
AACAGAAGATTTGGCAGAGG+AGG - chr3_1:92454774-92454793 None:intergenic 45.0%
TCCTCTGCCAAATCTTCTGT+TGG + chr3_1:92454773-92454792 Msa0388140:five_prime_UTR 45.0%
ACCAACAGAAGATTTGGCAG+AGG - chr3_1:92454777-92454796 None:intergenic 45.0%
TACCCTCTCATACTCTTGAG+GGG + chr3_1:92454804-92454823 Msa0388140:five_prime_UTR 45.0%
TGCCAGAGAAGCTTATTCCA+AGG - chr3_1:92455113-92455132 None:intergenic 45.0%
CTCTGTGGCAAAGGACAAAA+AGG - chr3_1:92455193-92455212 None:intergenic 45.0%
CCCAAATATGGTTGGCATGA+TGG + chr3_1:92455228-92455247 Msa0388140:CDS 45.0%
TGCCGTATCTGATATTGTGG+TGG + chr3_1:92455407-92455426 Msa0388140:CDS 45.0%
GCCGTATCTGATATTGTGGT+GGG + chr3_1:92455408-92455427 Msa0388140:CDS 45.0%
!! TGATATTGTGGTGGGTGACA+TGG + chr3_1:92455416-92455435 Msa0388140:CDS 45.0%
ATCTGCAGGAACCTCATCAT+GGG - chr3_1:92455454-92455473 None:intergenic 45.0%
TGACACTGACATCCTTGTGT+TGG + chr3_1:92455491-92455510 Msa0388140:CDS 45.0%
ATCGAACTCGACAGAGATGA+AGG + chr3_1:92455626-92455645 Msa0388140:CDS 45.0%
TCGAACTCGACAGAGATGAA+GGG + chr3_1:92455627-92455646 Msa0388140:CDS 45.0%
ACAGAGATGAAGGGCTCAAT+GGG + chr3_1:92455636-92455655 Msa0388140:CDS 45.0%
GGAGGGTTGCCAGATATTAA+AGG + chr3_1:92455801-92455820 Msa0388140:CDS 45.0%
GCTTATTGACGGAACTCCTT+GGG + chr3_1:92455841-92455860 Msa0388140:CDS 45.0%
! TTTTCTCAAGACCACGAGGA+AGG + chr3_1:92455868-92455887 Msa0388140:CDS 45.0%
!! GGAAGGATTTCGATTTTGGC+AGG + chr3_1:92455885-92455904 Msa0388140:CDS 45.0%
! GCAACATGGAGTGCCAATTA+TGG + chr3_1:92455935-92455954 Msa0388140:CDS 45.0%
CCGACACTACCTTATCATTC+TGG - chr3_1:92455980-92455999 None:intergenic 45.0%
CAAAATTTGGATAGGGGAGG+CGG + chr3_1:92456109-92456128 Msa0388140:CDS 45.0%
ATATGCACTTGCACTGGAGT+GGG + chr3_1:92456396-92456415 Msa0388140:CDS 45.0%
TCTCAGTACTACGATAGGCA+AGG + chr3_1:92456446-92456465 Msa0388140:CDS 45.0%
!! TTGACCTTGTTAGCACTGGT+AGG + chr3_1:92456599-92456618 Msa0388140:CDS 45.0%
GAAAGAAACAGCGTGTGAAC+TGG + chr3_1:92456724-92456743 Msa0388140:CDS 45.0%
! TGAACTGGGAATAGAAGTGC+CGG + chr3_1:92456739-92456758 Msa0388140:CDS 45.0%
ACTGGGTAAAGCCATTGCAA+TGG + chr3_1:92456823-92456842 Msa0388140:CDS 45.0%
CTGGGTAAAGCCATTGCAAT+GGG + chr3_1:92456824-92456843 Msa0388140:CDS 45.0%
ACTGAAGCTTCCCATTGCAA+TGG - chr3_1:92456837-92456856 None:intergenic 45.0%
TCCTGAAGACAAGCTTCTCA+TGG + chr3_1:92456856-92456875 Msa0388140:CDS 45.0%
ACCATGAGAAGCTTGTCTTC+AGG - chr3_1:92456860-92456879 None:intergenic 45.0%
TGCGCTGAAACCAATTGTGA+AGG + chr3_1:92457051-92457070 Msa0388140:CDS 45.0%
CTGAAACCAATTGTGAAGGC+CGG + chr3_1:92457055-92457074 Msa0388140:CDS 45.0%
GCGCATTCACCCAAATCAAT+TGG - chr3_1:92457201-92457220 None:intergenic 45.0%
GAATGCGCTAATGTGTCTTC+TGG + chr3_1:92457213-92457232 Msa0388140:CDS 45.0%
!! GGTGATGGAATTAAGTAGCG+AGG + chr3_1:92457249-92457268 Msa0388140:CDS 45.0%
!! TCAGAAGCACTGTTTCTCAG+TGG + chr3_1:92457519-92457538 Msa0388140:CDS 45.0%
! CACTGTTTCTCAGTGGCTTT+AGG + chr3_1:92457526-92457545 Msa0388140:CDS 45.0%
! AAGGGCTAGCATATTGCATG+CGG + chr3_1:92457590-92457609 Msa0388140:CDS 45.0%
TGGATGGGCCATTTGTGTTA+TGG + chr3_1:92457624-92457643 Msa0388140:CDS 45.0%
TGGGCCATTTGTGTTATGGT+TGG + chr3_1:92457628-92457647 Msa0388140:CDS 45.0%
GACACAACCAAGCATGTCCT+TGG + chr3_1:92454513-92454532 Msa0388140:five_prime_UTR 50.0%
GTTGGCACCATCTGATTCCA+AGG - chr3_1:92454533-92454552 None:intergenic 50.0%
CTTCTGGGTAGTAGTAGTGG+TGG - chr3_1:92454587-92454606 None:intergenic 50.0%
!! ACTGAAGAGAGTGGTGATGG+TGG - chr3_1:92454713-92454732 None:intergenic 50.0%
! GGTACTGAAGAGAGTGGTGA+TGG - chr3_1:92454716-92454735 None:intergenic 50.0%
ACCCTCTCATACTCTTGAGG+GGG + chr3_1:92454805-92454824 Msa0388140:five_prime_UTR 50.0%
! TCCCCCTCAAGAGTATGAGA+GGG - chr3_1:92454809-92454828 None:intergenic 50.0%
! ATCCCCCTCAAGAGTATGAG+AGG - chr3_1:92454810-92454829 None:intergenic 50.0%
! CTTCTTGAGCTTGGTGGGAT+TGG + chr3_1:92454866-92454885 Msa0388140:five_prime_UTR 50.0%
CTGCTTGAACTCTGTGGCAA+AGG - chr3_1:92455202-92455221 None:intergenic 50.0%
CTTTGCCACAGAGTTCAAGC+AGG + chr3_1:92455200-92455219 Msa0388140:CDS 50.0%
AAGCAGGAGGGACCCAAATA+TGG + chr3_1:92455216-92455235 Msa0388140:CDS 50.0%
AGGAGGGACCCAAATATGGT+TGG + chr3_1:92455220-92455239 Msa0388140:CDS 50.0%
!! TTGGCATGATGGTGTTGCCA+TGG + chr3_1:92455239-92455258 Msa0388140:CDS 50.0%
TCTGCAGGAACCTCATCATG+GGG - chr3_1:92455453-92455472 None:intergenic 50.0%
CATCTGCAGGAACCTCATCA+TGG - chr3_1:92455455-92455474 None:intergenic 50.0%
CATGATGAGGTTCCTGCAGA+TGG + chr3_1:92455453-92455472 Msa0388140:CDS 50.0%
CTCACAAGCAAACCATCTGC+AGG - chr3_1:92455468-92455487 None:intergenic 50.0%
!! GCAGATGGTTTGCTTGTGAG+TGG + chr3_1:92455468-92455487 Msa0388140:CDS 50.0%
!! TGACATCCTTGTGTTGGCTG+AGG + chr3_1:92455497-92455516 Msa0388140:CDS 50.0%
!! GACATCCTTGTGTTGGCTGA+GGG + chr3_1:92455498-92455517 Msa0388140:CDS 50.0%
TCATTCCCTCAGCCAACACA+AGG - chr3_1:92455506-92455525 None:intergenic 50.0%
! GCTGGCTCAAAGGTGATTGA+AGG + chr3_1:92455567-92455586 Msa0388140:CDS 50.0%
GACAGAGATGAAGGGCTCAA+TGG + chr3_1:92455635-92455654 Msa0388140:CDS 50.0%
CAGAGATGAAGGGCTCAATG+GGG + chr3_1:92455637-92455656 Msa0388140:CDS 50.0%
GGCTTATTGACGGAACTCCT+TGG + chr3_1:92455840-92455859 Msa0388140:CDS 50.0%
GGCGGAGACAGATATCAACA+AGG + chr3_1:92456127-92456146 Msa0388140:CDS 50.0%
AACGAATTGGACAGAGGCGA+AGG - chr3_1:92456236-92456255 None:intergenic 50.0%
CTGGATTCTAACCAAGAGGG+TGG + chr3_1:92456335-92456354 Msa0388140:CDS 50.0%
GATTCTAACCAAGAGGGTGG+TGG + chr3_1:92456338-92456357 Msa0388140:CDS 50.0%
GATATGCACTTGCACTGGAG+TGG + chr3_1:92456395-92456414 Msa0388140:CDS 50.0%
TATGCACTTGCACTGGAGTG+GGG + chr3_1:92456397-92456416 Msa0388140:CDS 50.0%
TGGGGCTGCATCCACAATAT+TGG + chr3_1:92456415-92456434 Msa0388140:CDS 50.0%
GAGACCTACCAGTGCTAACA+AGG - chr3_1:92456606-92456625 None:intergenic 50.0%
GGTCTCGACAGATGACATCA+TGG + chr3_1:92456697-92456716 Msa0388140:CDS 50.0%
!! GGAATAGAAGTGCCGGTAGA+CGG + chr3_1:92456746-92456765 Msa0388140:CDS 50.0%
TCTTCTGGGTGGCCTAATGA+TGG + chr3_1:92457228-92457247 Msa0388140:CDS 50.0%
AACACAAATGGCCCATCCAG+TGG - chr3_1:92457623-92457642 None:intergenic 50.0%
! AAAGGTTGTGGGGTTGACTC+TGG - chr3_1:92457739-92457758 None:intergenic 50.0%
!! TTGTTCCCTCTAGGACTAGC+AGG + chr3_1:92457799-92457818 Msa0388140:CDS 50.0%
!! CTAGGAGGCACTGAGGTGTA+TGG - chr3_1:92454737-92454756 None:intergenic 55.0%
GTTCTAGCAGGAGGACTAGG+AGG - chr3_1:92454752-92454771 None:intergenic 55.0%
! GAGGTTCTAGCAGGAGGACT+AGG - chr3_1:92454755-92454774 None:intergenic 55.0%
! TTGGCAGAGGAGGTTCTAGC+AGG - chr3_1:92454764-92454783 None:intergenic 55.0%
TGCCACAGAGTTCAAGCAGG+AGG + chr3_1:92455203-92455222 Msa0388140:CDS 55.0%
GCCACAGAGTTCAAGCAGGA+GGG + chr3_1:92455204-92455223 Msa0388140:CDS 55.0%
TCCCTCCTGCTTGAACTCTG+TGG - chr3_1:92455208-92455227 None:intergenic 55.0%
CCAAAACTCCACCACCCTCT+TGG - chr3_1:92456349-92456368 None:intergenic 55.0%
!!! CCAAGAGGGTGGTGGAGTTT+TGG + chr3_1:92456346-92456365 Msa0388140:CDS 55.0%
! CCTTCAAGGTGTCCGTCTAC+CGG - chr3_1:92456761-92456780 None:intergenic 55.0%
CTTCTGCCGGCCTTCACAAT+TGG - chr3_1:92457064-92457083 None:intergenic 55.0%
GCGCTAATGTGTCTTCTGGG+TGG + chr3_1:92457217-92457236 Msa0388140:CDS 55.0%
! GGGTGGCCTAATGATGGTGA+TGG + chr3_1:92457234-92457253 Msa0388140:CDS 55.0%
CACCACTGATACTTCACCCC+TGG + chr3_1:92457708-92457727 Msa0388140:CDS 55.0%
! GTCCAGGGGTGAAGTATCAG+TGG - chr3_1:92457713-92457732 None:intergenic 55.0%
! GTTGACTCTGGAGAGTCCAG+GGG - chr3_1:92457727-92457746 None:intergenic 55.0%
! GGTTGACTCTGGAGAGTCCA+GGG - chr3_1:92457728-92457747 None:intergenic 55.0%
!! AGGAGGACTAGGAGGCACTG+AGG - chr3_1:92454744-92454763 None:intergenic 60.0%
! GCAGAGGAGGTTCTAGCAGG+AGG - chr3_1:92454761-92454780 None:intergenic 60.0%
CCGGTAGACGGACACCTTGA+AGG + chr3_1:92456758-92456777 Msa0388140:CDS 60.0%
TGCATGCGGCTGAATGCCAC+TGG + chr3_1:92457604-92457623 Msa0388140:CDS 60.0%
TGCGGCTGAATGCCACTGGA+TGG + chr3_1:92457608-92457627 Msa0388140:CDS 60.0%
GCGGCTGAATGCCACTGGAT+GGG + chr3_1:92457609-92457628 Msa0388140:CDS 60.0%
! GGGTTGACTCTGGAGAGTCC+AGG - chr3_1:92457729-92457748 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 92454093 92457916 92454093 ID=Msa0388140;Name=Msa0388140
chr3_1 mRNA 92454093 92457916 92454093 ID=Msa0388140-mRNA-1;Parent=Msa0388140;Name=Msa0388140-mRNA-1;_AED=0.00;_eAED=0.00;_QI=920|1|1|1|1|1|2|79|887
chr3_1 exon 92454093 92454934 92454093 ID=Msa0388140-mRNA-1:exon:25966;Parent=Msa0388140-mRNA-1
chr3_1 exon 92455096 92457916 92455096 ID=Msa0388140-mRNA-1:exon:25967;Parent=Msa0388140-mRNA-1
chr3_1 five_prime_UTR 92454093 92454934 92454093 ID=Msa0388140-mRNA-1:five_prime_utr;Parent=Msa0388140-mRNA-1
chr3_1 five_prime_UTR 92455096 92455173 92455096 ID=Msa0388140-mRNA-1:five_prime_utr;Parent=Msa0388140-mRNA-1
chr3_1 CDS 92455174 92457837 92455174 ID=Msa0388140-mRNA-1:cds;Parent=Msa0388140-mRNA-1
chr3_1 three_prime_UTR 92457838 92457916 92457838 ID=Msa0388140-mRNA-1:three_prime_utr;Parent=Msa0388140-mRNA-1
Gene Sequence

>Msa0388140

ATGCTGCTGATTTCGGCCTTTTTGTCCTTTGCCACAGAGTTCAAGCAGGAGGGACCCAAATATGGTTGGCATGATGGTGTTGCCATGGTGTTTGCTCTTCTACTTCTGCTTGCATTCTCTTCAATAACTAACTTTTGCCGTGAGCGAAAAATGATGAAGCTGGCAAAGAAAAAAGGTCAGTTGAAATTCAATGTTGAAAGACGTCAAGTGTCCCAAGCTGTAAATCTTGCTCTTGCCGTATCTGATATTGTGGTGGGTGACATGGTCTATTTGAATCCCCATGATGAGGTTCCTGCAGATGGTTTGCTTGTGAGTGGTGACACTGACATCCTTGTGTTGGCTGAGGGAATGAAAAATGAAAAAATTGATTGTGAGGAGAACCCATTTCTTATAGCTGGCTCAAAGGTGATTGAAGGTAATGGTTGGATGATTGTGACATCAGTTCCAAACAAATCGAACTCGACAGAGATGAAGGGCTCAATGGGGCATCATCCTAAAAAAAGAGGACTTTTGGAAAGTCTAATTGAGAAGCCAATTTCCTACCTTGACAAAGCTTCTCTTTTTATCTTTACACTTGTTGCACTTGTGTTGTTCATTCGCCTAATATGTAAAAAAGATGTGGATGGTGGAGGGTTGCCAGATATTAAAGGTAATAATGTTTCAGTTGGCTTATTGACGGAACTCCTTGGGAATATTTTCTCAAGACCACGAGGAAGGATTTCGATTTTGGCAGGTCTTTTTAGTGTTGTAATACTGTGTGTGCAACATGGAGTGCCAATTATGGTTACTCTTTCTCTCCATTACCAGAATGATAAGGTAGTGTCGGATCAAGAAGCCGTTCTTTATGATTTGTCAACTTGTACAACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCTGGCGATATAATATCAAAACCAATGGAAGTTAGCAAAATTTGGATAGGGGAGGCGGAGACAGATATCAACAAGGTTGAGGAATCAGAAACATGTCGAGTTGTACTTGACAAGCTTAAACAAGGAGTTGGTTTATCAGTTCTTGCATCAAGACTGTCTCCTTCGCCTCTGTCCAATTCGTTTGTTTCCTTGGCAGAAAAAACATGGAAAATGGACATTGAATCTTTCAGAGAAAATTTTCACATTCTTGAACATGGCAAACTGGATTCTAACCAAGAGGGTGGTGGAGTTTTGGTGAGAGATGTTAGGGACAATGAACAAGATATGCACTTGCACTGGAGTGGGGCTGCATCCACAATATTGGAAATGTGTTCTCAGTACTACGATAGGCAAGGAAAATGTCATTCCATGGAAAATCAGAAAATCAAATATGGACAGGTGATTCAAGATATGGAGGATAATGGCCTTAAGCCAATTGCACTTGCTTATAGACAAACACAAGTGCAAGAACTCAAGCAAGATGAATTGACCTTGTTAGCACTGGTAGGTCTCAAATACAAGTGTCGAGAATCGACAAAAAAAGCTTTGAAAAATCTGCAAAATGATGGAATACATATCAAATTGGTCTCGACAGATGACATCATGGTAGTGAAAGAAACAGCGTGTGAACTGGGAATAGAAGTGCCGGTAGACGGACACCTTGAAGGAAAAGAACTTCAAGACTTGAATGGCAAAGCTAGATTAGTCAAACTGGGTAAAGCCATTGCAATGGGAAGCTTCAGTCCTGAAGACAAGCTTCTCATGGTACGGTGTTTGCAAGATAAAGGTGATGTGGTTGCATTCATTGAAACACAACAGTTGATGACTAATCAAACTTCAGAAGTTCTAAAGATAGCTGATGTAGGGATAGTTCATAACTCTCTAAGCAAATTATTTGATAGTAGAGAGGGTTCTGGTTTATCTATCACATGTTTCAGTGCGCTGAAACCAATTGTGAAGGCCGGCAGAAGTGAATATCACAATATTCAAAAGTTCATTCAACTTCAACTGACAGTTGGTATATCAGGGTTACTCATAACCTTGATTACAACAATATTCACAGGAAATTCTCCTCTAACAGAAATCCAATTGATTTGGGTGAATGCGCTAATGTGTCTTCTGGGTGGCCTAATGATGGTGATGGAATTAAGTAGCGAGGAAGAGCTTGTCAAACAACCATATGATAGGAATCAACTGATTATAACCAAGAAAATATGGAAAAACATTGTTTTTCAGGTTTTGTATCAGGCTTCTGCCTGCATAATACTTGAATTTGGGGGACATATAACTGACAGAGAAAAACAAGTAAGGAAAACCATGATCTTCAATACATTCTTCTTATGCCAGCTCTTCAATCTGCTCAATACCATGGATTTTTTGAAAGCAGAAGTTTTTAAGATTGATGTTCAGAAGCACTGTTTCTCAGTGGCTTTAGGTAGTTGTTTTGTTATGCAGGTAGTGGTTATTGAGTATGCAAAAGGGCTAGCATATTGCATGCGGCTGAATGCCACTGGATGGGCCATTTGTGTTATGGTTGGTGCTTTTTCATGGGTACTTGAATGGATCTTGAATAAGATTCTTTCAGTTTTTTTCAGCACCACTGATACTTCACCCCTGGACTCTCCAGAGTCAACCCCACAACCTTTATTCTATTTTTATTGGGGGCTTCCATTTATGATGCTTCTTTTGTTCCCTCTAGGACTAGCAGGTATTAAATTTGATTGA
Protein sequence

>Msa0388140

MLLISAFLSFATEFKQEGPKYGWHDGVAMVFALLLLLAFSSITNFCRERKMMKLAKKKGQLKFNVERRQVSQAVNLALAVSDIVVGDMVYLNPHDEVPADGLLVSGDTDILVLAEGMKNEKIDCEENPFLIAGSKVIEGNGWMIVTSVPNKSNSTEMKGSMGHHPKKRGLLESLIEKPISYLDKASLFIFTLVALVLFIRLICKKDVDGGGLPDIKGNNVSVGLLTELLGNIFSRPRGRISILAGLFSVVILCVQHGVPIMVTLSLHYQNDKVVSDQEAVLYDLSTCTTMGLVTVICIDVSGDIISKPMEVSKIWIGEAETDINKVEESETCRVVLDKLKQGVGLSVLASRLSPSPLSNSFVSLAEKTWKMDIESFRENFHILEHGKLDSNQEGGGVLVRDVRDNEQDMHLHWSGAASTILEMCSQYYDRQGKCHSMENQKIKYGQVIQDMEDNGLKPIALAYRQTQVQELKQDELTLLALVGLKYKCRESTKKALKNLQNDGIHIKLVSTDDIMVVKETACELGIEVPVDGHLEGKELQDLNGKARLVKLGKAIAMGSFSPEDKLLMVRCLQDKGDVVAFIETQQLMTNQTSEVLKIADVGIVHNSLSKLFDSREGSGLSITCFSALKPIVKAGRSEYHNIQKFIQLQLTVGISGLLITLITTIFTGNSPLTEIQLIWVNALMCLLGGLMMVMELSSEEELVKQPYDRNQLIITKKIWKNIVFQVLYQASACIILEFGGHITDREKQVRKTMIFNTFFLCQLFNLLNTMDFLKAEVFKIDVQKHCFSVALGSCFVMQVVVIEYAKGLAYCMRLNATGWAICVMVGAFSWVLEWILNKILSVFFSTTDTSPLDSPESTPQPLFYFYWGLPFMMLLLFPLGLAGIKFD*