AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0826560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0826560 MtrunA17_Chr5g0447521 93.845 1056 60 3 1 1055 1 1052 0.0 1982
Msa0826560 MtrunA17_Chr4g0005551 63.529 1020 310 13 11 1018 7 976 0.0 1196
Msa0826560 MtrunA17_Chr6g0456201 33.523 880 519 19 166 1007 153 1004 8.30e-133 427
Msa0826560 MtrunA17_Chr7g0260401 32.664 946 560 21 108 1000 109 1030 1.19e-127 415
Msa0826560 MtrunA17_Chr4g0002331 29.454 971 599 22 85 1000 133 1072 7.17e-116 384
Msa0826560 MtrunA17_Chr2g0298871 28.984 935 593 22 117 1010 165 1069 1.78e-111 372
Msa0826560 MtrunA17_Chr8g0382071 27.474 950 603 22 107 1007 100 1012 3.71e-90 311
Msa0826560 MtrunA17_Chr1g0173111 26.620 1003 644 28 73 1027 69 1027 2.41e-87 303
Msa0826560 MtrunA17_Chr8g0340261 32.292 576 328 13 477 1021 4 548 6.17e-80 271
Msa0826560 MtrunA17_Chr4g0020551 26.596 846 543 23 131 937 71 877 1.73e-77 273
Msa0826560 MtrunA17_Chr4g0054021 25.965 855 576 18 166 994 99 922 2.25e-76 271
Msa0826560 MtrunA17_Chr8g0355421 26.782 870 573 20 166 1004 164 1000 4.12e-76 271
Msa0826560 MtrunA17_Chr5g0401211 25.987 912 613 22 125 1007 134 1012 7.59e-74 265
Msa0826560 MtrunA17_Chr3g0134771 25.054 934 612 24 111 994 106 1001 5.11e-72 259
Msa0826560 MtrunA17_Chr8g0340271 29.048 420 253 9 74 470 46 443 5.49e-35 140
Msa0826560 MtrunA17_Chr2g0334221 34.274 248 142 5 518 748 74 317 5.04e-33 131
Msa0826560 MtrunA17_Chr2g0334201 30.864 162 105 2 855 1010 4 164 5.95e-22 94.7
Msa0826560 MtrunA17_Chr2g0334231 25.419 358 240 7 117 472 167 499 8.34e-21 97.4
Msa0826560 MtrunA17_Chr7g0263361 20.769 780 488 24 167 849 84 830 3.47e-19 94.0
Msa0826560 MtrunA17_Chr3g0134951 23.247 271 183 5 627 883 561 820 6.17e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0826560 AT3G63380.1 30.870 1069 599 33 34 1031 23 1022 1.87e-128 417
Msa0826560 AT3G22910.1 32.526 867 534 15 166 1007 160 1000 2.09e-120 395
Msa0826560 AT5G57110.1 30.119 923 576 20 117 1000 146 1038 4.38e-119 392
Msa0826560 AT5G57110.3 30.119 923 576 20 117 1000 146 1038 4.38e-119 392
Msa0826560 AT5G57110.2 30.119 923 576 20 117 1000 146 1038 4.38e-119 392
Msa0826560 AT4G29900.1 28.631 957 601 22 108 1010 121 1049 1.74e-111 372
Msa0826560 AT4G29900.2 28.631 957 601 22 108 1010 121 1049 1.74e-111 372
Msa0826560 AT3G21180.1 28.801 934 596 20 117 1010 160 1064 1.35e-105 356
Msa0826560 AT3G57330.2 26.709 936 606 23 107 1000 44 941 3.52e-91 313
Msa0826560 AT3G57330.1 26.709 936 606 23 107 1000 99 996 1.05e-90 313
Msa0826560 AT2G41560.1 27.044 954 600 26 103 1004 94 1003 2.24e-87 304
Msa0826560 AT2G41560.2 26.984 945 595 25 111 1004 1 901 3.91e-87 301
Msa0826560 AT2G41560.3 26.984 945 595 25 111 1004 1 901 3.91e-87 301
Msa0826560 AT2G41560.4 26.984 945 595 25 111 1004 1 901 3.91e-87 301
Msa0826560 AT1G27770.3 25.138 903 608 19 125 994 72 939 1.53e-76 272
Msa0826560 AT1G27770.4 25.138 903 608 19 125 994 135 1002 2.49e-76 272
Msa0826560 AT1G27770.1 25.138 903 608 19 125 994 135 1002 2.49e-76 272
Msa0826560 AT4G37640.1 25.991 858 575 19 166 994 173 999 5.51e-73 262
Msa0826560 AT2G22950.1 24.949 974 651 23 78 1007 76 1013 4.64e-71 257
Msa0826560 AT5G53010.1 24.321 884 573 25 131 973 186 1014 3.13e-50 194
Msa0826560 AT1G27770.2 31.561 301 189 6 704 994 635 928 4.13e-33 139
Msa0826560 AT1G27770.2 21.440 611 425 15 125 710 135 715 7.54e-29 125
Msa0826560 AT5G53010.2 24.793 605 404 19 131 710 186 764 1.08e-31 134
Msa0826560 AT1G10130.1 21.294 742 446 22 199 849 91 785 2.45e-15 81.6

Find 250 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTAACACCTAAGCCTATT+TGG 0.157063 5_3:+67039431 Msa0826560:five_prime_UTR
ACCATCATGCCAACCATATT+TGG 0.174847 5_3:-67040351 None:intergenic
CAATGGAAGTTAGCAAAATT+TGG 0.179999 5_3:+67041218 Msa0826560:CDS
GCCTGCATAATACTTGAATT+TGG 0.196809 5_3:+67042489 Msa0826560:CDS
ACGAGGAAGGATTTCGATTT+TGG 0.202910 5_3:+67041003 Msa0826560:CDS
CAACTGACAGTTGGTATATC+AGG 0.229585 5_3:+67042240 Msa0826560:CDS
TAACAGAAATCCAATTGATT+TGG 0.253162 5_3:+67042310 Msa0826560:CDS
GAATGCGCTAATGTGTCTTC+TGG 0.262195 5_3:+67042335 Msa0826560:CDS
AATTTCAATGCTGCTGATTT+CGG 0.277466 5_3:+67040289 Msa0826560:CDS
CCTGCATAATACTTGAATTT+GGG 0.278796 5_3:+67042490 Msa0826560:CDS
GTCCAATTCGTTTGTTTCCT+TGG 0.288653 5_3:+67041366 Msa0826560:CDS
CTTCTTGAGCTTGGTGGGAT+TGG 0.294351 5_3:+67039988 Msa0826560:CDS
TGATTATAACCAAGAAAATA+TGG 0.302056 5_3:+67042430 Msa0826560:CDS
CCAAGAGGGTGGTGGAGTTT+TGG 0.302404 5_3:+67041468 Msa0826560:CDS
ACATTATTACCTTTAATATC+TGG 0.306241 5_3:-67040932 None:intergenic
CAAAGCTAGATTAGTCAAAC+TGG 0.310047 5_3:+67041927 Msa0826560:CDS
GAAAATCAGAAAATCAAATA+TGG 0.313239 5_3:+67041607 Msa0826560:CDS
CACTGTTTCTCAGTGGCTTT+AGG 0.314211 5_3:+67042648 Msa0826560:CDS
AACAAAAGAAGCATCATAAA+TGG 0.318121 5_3:-67042903 None:intergenic
ATTATGGTATGTGTCCAAAT+AGG 0.320978 5_3:-67039445 None:intergenic
GCTTTGTCAAGGTAGGAAAT+TGG 0.321870 5_3:-67040827 None:intergenic
ATCAATACCAACAGAAGATT+TGG 0.322142 5_3:-67039902 None:intergenic
CTTCTGCCGGCCTTCACAAT+TGG 0.333492 5_3:-67042183 None:intergenic
AGAGAAAGAGTAACCATAAT+TGG 0.335321 5_3:-67041070 None:intergenic
TAAGCTTCTCTGGCATTCTA+TGG 0.339064 5_3:+67040240 Msa0826560:CDS
ATCAATTGGATTTCTGTTAG+AGG 0.341325 5_3:-67042306 None:intergenic
TGTATACCAGTTAATAGTTT+AGG 0.348825 5_3:+67042993 Msa0826560:three_prime_UTR
TGGGGCTGCATCCACAATAT+TGG 0.349057 5_3:+67041537 Msa0826560:CDS
AACAGAAATCCAATTGATTT+GGG 0.352491 5_3:+67042311 Msa0826560:CDS
TGGATGGGCCATTTGTGTTA+TGG 0.354395 5_3:+67042746 Msa0826560:CDS
GAATCACCTAAACTATTAAC+TGG 0.355906 5_3:-67042999 None:intergenic
GAGAATTTACACACAAAATC+TGG 0.357742 5_3:-67039397 None:intergenic
CTCTGTGGCAAAGGACAAAA+AGG 0.357858 5_3:-67040312 None:intergenic
CATTCTTGAACATGGCAAAC+TGG 0.359529 5_3:+67041438 Msa0826560:CDS
TTGTCAACTTGTACAACAAT+GGG 0.362598 5_3:+67041145 Msa0826560:CDS
TTTGAGCCAGCTATAAGAAA+TGG 0.367284 5_3:-67040677 None:intergenic
TGCCAAGGAAACAAACGAAT+TGG 0.368813 5_3:-67041368 None:intergenic
CCGACACTACCTTATCATTC+TGG 0.370237 5_3:-67041099 None:intergenic
TCCAAATAGGCTTAGGTGTT+AGG 0.371321 5_3:-67039432 None:intergenic
ATCAGTTGATTCCTATCATA+TGG 0.371423 5_3:-67042411 None:intergenic
TAGTTTGCACTAGAAGTTGT+AGG 0.373020 5_3:-67039790 None:intergenic
GCGCATTCACCCAAATCAAT+TGG 0.376917 5_3:-67042320 None:intergenic
AAGCAGGAGGGACCCAAATA+TGG 0.386700 5_3:+67040338 Msa0826560:CDS
TGTGAATATTGTTGTAATCA+AGG 0.389115 5_3:-67042274 None:intergenic
TCTGTCGAGTTCGATTTGTT+TGG 0.389147 5_3:-67040740 None:intergenic
TGATGGAATACATATCAAAT+TGG 0.391422 5_3:+67041798 Msa0826560:CDS
GGAGGGTTGCCAGATATTAA+AGG 0.393700 5_3:+67040923 Msa0826560:CDS
GCAACATGGAGTGCCAATTA+TGG 0.394225 5_3:+67041057 Msa0826560:CDS
GTCATCTGCATTGATGTATC+TGG 0.395410 5_3:+67041178 Msa0826560:CDS
GAAAGAAACAGCGTGTGAAC+TGG 0.398536 5_3:+67041846 Msa0826560:CDS
GGGTTGACTCTGGAGAGTCC+AGG 0.398687 5_3:-67042848 None:intergenic
TTGAAATCTCTTCTTGAGCT+TGG 0.405671 5_3:+67039979 Msa0826560:CDS
TGGACAGGTGATTCAAGATA+TGG 0.406755 5_3:+67041627 Msa0826560:CDS
ACAGAGATGAAGGGCTCAAT+GGG 0.413653 5_3:+67040758 Msa0826560:CDS
CCATCATGCCAACCATATTT+GGG 0.417664 5_3:-67040350 None:intergenic
TTTGATAGTAGAGAGGGTTC+TGG 0.419569 5_3:+67042129 Msa0826560:CDS
AAATCTCTTCTTGAGCTTGG+TGG 0.420402 5_3:+67039982 Msa0826560:CDS
CTCATACAATTAACATCAGT+TGG 0.420995 5_3:-67039305 None:intergenic
TGTCTATAAGCAAGTGCAAT+TGG 0.421032 5_3:-67041667 None:intergenic
ATTCAAGATATGGAGGATAA+TGG 0.425036 5_3:+67041637 Msa0826560:CDS
ATAGTTTGTGACGTTCTTCA+TGG 0.426851 5_3:+67040012 Msa0826560:CDS
GAAGAATGTATTGAAGATCA+TGG 0.429623 5_3:-67042550 None:intergenic
GCTTATTGACGGAACTCCTT+GGG 0.431468 5_3:+67040963 Msa0826560:CDS
AACCTTGGAATAAGCTTCTC+TGG 0.433403 5_3:+67040230 Msa0826560:CDS
AATCTCTTCTTGAGCTTGGT+GGG 0.433995 5_3:+67039983 Msa0826560:CDS
GTACGGTGTTTGCAAGATAA+AGG 0.438189 5_3:+67042000 Msa0826560:CDS
GAGGTTCTAGCAGGAGGACT+AGG 0.439237 5_3:-67039874 None:intergenic
TTGTTCCCTCTAGGACTAGC+AGG 0.441060 5_3:+67042921 Msa0826560:CDS
GGCTTATTGACGGAACTCCT+TGG 0.445403 5_3:+67040962 Msa0826560:CDS
CTTGCTGTACTTGCTTCTGC+TGG 0.446511 5_3:-67039719 None:intergenic
TGTTTGTAACACTTGTTCTC+AGG 0.447714 5_3:-67039495 None:intergenic
GTGGTTATTGAGTATGCAAA+AGG 0.448861 5_3:+67042693 Msa0826560:CDS
CCCAAATATGGTTGGCATGA+TGG 0.449483 5_3:+67040350 Msa0826560:CDS
TTGTCAAACAACCATATGAT+AGG 0.450454 5_3:+67042400 Msa0826560:CDS
GGTTGACTCTGGAGAGTCCA+GGG 0.451520 5_3:-67042847 None:intergenic
GAAGTTAGCAAAATTTGGAT+AGG 0.453475 5_3:+67041223 Msa0826560:CDS
GACAGTTATGGTTGAATTGA+AGG 0.455352 5_3:-67039595 None:intergenic
TTAATTCCATCACCATCATT+AGG 0.456572 5_3:-67042362 None:intergenic
CATGATGAGGTTCCTGCAGA+TGG 0.459115 5_3:+67040575 Msa0826560:CDS
GTTCTAAAGATAGCTGATGT+AGG 0.465453 5_3:+67042078 Msa0826560:CDS
AAGCAAGTGCAATTGGCTTA+AGG 0.466030 5_3:-67041660 None:intergenic
TGCGGCTGAATGCCACTGGA+TGG 0.469736 5_3:+67042730 Msa0826560:CDS
CCTTCAAGGTGTCCGTCTAC+CGG 0.470089 5_3:-67041880 None:intergenic
GACACAACCAAGCATGTCCT+TGG 0.470309 5_3:+67039633 Msa0826560:CDS
CTACCTTATCATTCTGGTAA+TGG 0.470573 5_3:-67041093 None:intergenic
CAGAAAATCACTAGGAACCT+TGG 0.471195 5_3:+67040215 Msa0826560:intron
CAAGAGCAAGATTTACAGCT+TGG 0.471941 5_3:-67040508 None:intergenic
ACCATGAGAAGCTTGTCTTC+AGG 0.473929 5_3:-67041979 None:intergenic
GAAGCAAGTACAGCAAGAAA+TGG 0.474171 5_3:+67039725 Msa0826560:CDS
GAGAACCCATTTCTTATAGC+TGG 0.479384 5_3:+67040671 Msa0826560:CDS
AGAAGTTGTAGGTTTCTTCA+AGG 0.480044 5_3:-67039779 None:intergenic
AAAGGTAATAATGTTTCAGT+TGG 0.481387 5_3:+67040941 Msa0826560:CDS
TTGAGCCAGCTATAAGAAAT+GGG 0.482023 5_3:-67040676 None:intergenic
CCCAAATTCAAGTATTATGC+AGG 0.482382 5_3:-67042490 None:intergenic
AATGCGCTAATGTGTCTTCT+GGG 0.483840 5_3:+67042336 Msa0826560:CDS
CATCTGCAGGAACCTCATCA+TGG 0.485681 5_3:-67040574 None:intergenic
GACAGAGATGAAGGGCTCAA+TGG 0.486796 5_3:+67040757 Msa0826560:CDS
ATCGAACTCGACAGAGATGA+AGG 0.488534 5_3:+67040748 Msa0826560:CDS
CCAAAACTCCACCACCCTCT+TGG 0.489064 5_3:-67041468 None:intergenic
AAAGGTTGTGGGGTTGACTC+TGG 0.489348 5_3:-67042858 None:intergenic
TGTTTCAGTTGGCTTATTGA+CGG 0.489827 5_3:+67040952 Msa0826560:CDS
AAGTTAGCAAAATTTGGATA+GGG 0.490191 5_3:+67041224 Msa0826560:CDS
CAAATTATTTGATAGTAGAG+AGG 0.493138 5_3:+67042122 Msa0826560:CDS
ATCTGCAGGAACCTCATCAT+GGG 0.493358 5_3:-67040573 None:intergenic
TCTTCTGGGTGGCCTAATGA+TGG 0.493808 5_3:+67042350 Msa0826560:CDS
TCTCCATTACCAGAATGATA+AGG 0.497677 5_3:+67041090 Msa0826560:CDS
CTGGGTAAAGCCATTGCAAT+GGG 0.497809 5_3:+67041946 Msa0826560:CDS
GCTGGCTCAAAGGTGATTGA+AGG 0.498712 5_3:+67040689 Msa0826560:CDS
TTGGCAGAGGAGGTTCTAGC+AGG 0.499152 5_3:-67039883 None:intergenic
CTGCTTGAACTCTGTGGCAA+AGG 0.502496 5_3:-67040321 None:intergenic
AGCACCAACCATAACACAAA+TGG 0.504992 5_3:-67042754 None:intergenic
CCGGTAGACGGACACCTTGA+AGG 0.506635 5_3:+67041880 Msa0826560:CDS
GACAAGCTTAAACAAGGAGT+TGG 0.507150 5_3:+67041304 Msa0826560:CDS
CATCTTAATGTAATAGTGCC+AGG 0.508768 5_3:+67042968 Msa0826560:three_prime_UTR
ATACCCTCTCATACTCTTGA+GGG 0.509190 5_3:+67039925 Msa0826560:CDS
AGAACACATTTCCAATATTG+TGG 0.511721 5_3:-67041548 None:intergenic
ATATGCACTTGCACTGGAGT+GGG 0.512048 5_3:+67041518 Msa0826560:CDS
CAAAATTTGGATAGGGGAGG+CGG 0.512201 5_3:+67041231 Msa0826560:CDS
AAGAGCAAGATTTACAGCTT+GGG 0.513528 5_3:-67040507 None:intergenic
GTATGTGTCCAAATAGGCTT+AGG 0.513648 5_3:-67039439 None:intergenic
TTTGTCAACTTGTACAACAA+TGG 0.515124 5_3:+67041144 Msa0826560:CDS
TTTGTTAGTTGTGACAGTTA+TGG 0.515484 5_3:-67039607 None:intergenic
TCTGATTCCAAGGACATGCT+TGG 0.516296 5_3:-67039640 None:intergenic
TGGGCCATTTGTGTTATGGT+TGG 0.517018 5_3:+67042750 Msa0826560:CDS
AAAGAACTTCAAGACTTGAA+TGG 0.517146 5_3:+67041904 Msa0826560:CDS
CTAGGAGGCACTGAGGTGTA+TGG 0.517434 5_3:-67039856 None:intergenic
TGAATTGACCTTGTTAGCAC+TGG 0.517568 5_3:+67041717 Msa0826560:CDS
CACCACTGATACTTCACCCC+TGG 0.518181 5_3:+67042830 Msa0826560:CDS
AACAAGATATGCACTTGCAC+TGG 0.521150 5_3:+67041512 Msa0826560:CDS
ATTGTGATATTCACTTCTGC+CGG 0.521929 5_3:-67042196 None:intergenic
CTGAAACCAATTGTGAAGGC+CGG 0.523980 5_3:+67042177 Msa0826560:CDS
TGGCGTAAAAGCTTATACAT+AGG 0.526016 5_3:+67039745 Msa0826560:CDS
TGCCGTATCTGATATTGTGG+TGG 0.527209 5_3:+67040529 Msa0826560:CDS
TCAGAAAATCAAATATGGAC+AGG 0.529401 5_3:+67041612 Msa0826560:CDS
TGCATGCGGCTGAATGCCAC+TGG 0.529895 5_3:+67042726 Msa0826560:CDS
TCCTCTGCCAAATCTTCTGT+TGG 0.537162 5_3:+67039895 Msa0826560:CDS
TATTGAGCAGATTGAAGAGC+TGG 0.537900 5_3:-67042578 None:intergenic
GACAGATATCAACAAGGTTG+AGG 0.540048 5_3:+67041255 Msa0826560:CDS
AAAGAAACAGCGTGTGAACT+GGG 0.540068 5_3:+67041847 Msa0826560:CDS
GCAAGGAAAATGTCATTCCA+TGG 0.542001 5_3:+67041585 Msa0826560:CDS
GTTATGGTTGAATTGAAGGC+AGG 0.542299 5_3:-67039591 None:intergenic
AACTGACAGTTGGTATATCA+GGG 0.544589 5_3:+67042241 Msa0826560:CDS
TTGATTACAACAATATTCAC+AGG 0.547172 5_3:+67042276 Msa0826560:CDS
TTCTAAAGATAGCTGATGTA+GGG 0.547691 5_3:+67042079 Msa0826560:CDS
AAATTATTTGATAGTAGAGA+GGG 0.548285 5_3:+67042123 Msa0826560:CDS
CGATATAATATCAAAACCAA+TGG 0.548953 5_3:+67041201 Msa0826560:CDS
AGTTAGCAAAATTTGGATAG+GGG 0.555283 5_3:+67041225 Msa0826560:CDS
GATATGCACTTGCACTGGAG+TGG 0.555354 5_3:+67041517 Msa0826560:CDS
GACATCCTTGTGTTGGCTGA+GGG 0.561266 5_3:+67040620 Msa0826560:CDS
GGAATAGAAGTGCCGGTAGA+CGG 0.562622 5_3:+67041868 Msa0826560:CDS
TGACACTGACATCCTTGTGT+TGG 0.563044 5_3:+67040613 Msa0826560:CDS
TGATATTGTGGTGGGTGACA+TGG 0.563185 5_3:+67040538 Msa0826560:CDS
GATGGTGCCAACATAGAACT+TGG 0.564084 5_3:+67039661 Msa0826560:CDS
ATTCAACTTCAACTGACAGT+TGG 0.564810 5_3:+67042231 Msa0826560:CDS
GCAGCATTGAAATTGTGTAA+AGG 0.566013 5_3:-67040280 None:intergenic
ACCCACCACAATATCAGATA+CGG 0.566639 5_3:-67040531 None:intergenic
CTCACAAGCAAACCATCTGC+AGG 0.569043 5_3:-67040587 None:intergenic
GATTCTAACCAAGAGGGTGG+TGG 0.569132 5_3:+67041460 Msa0826560:CDS
AATACAAAATCATTGAGTTG+AGG 0.569223 5_3:-67039347 None:intergenic
AACAGAAGATTTGGCAGAGG+AGG 0.570745 5_3:-67039893 None:intergenic
AACTTGTACAACAATGGGGT+TGG 0.570757 5_3:+67041150 Msa0826560:CDS
AACGAATTGGACAGAGGCGA+AGG 0.571944 5_3:-67041355 None:intergenic
GTTGGCACCATCTGATTCCA+AGG 0.572139 5_3:-67039650 None:intergenic
AAGACAAGCTTCTCATGGTA+CGG 0.575385 5_3:+67041983 Msa0826560:CDS
GCTTCTGCTGGTAGTAGTAG+TGG 0.575649 5_3:-67039707 None:intergenic
TCATTCCCTCAGCCAACACA+AGG 0.579377 5_3:-67040625 None:intergenic
TATTAACTGGTATACATACC+TGG 0.580002 5_3:-67042986 None:intergenic
TGACATCCTTGTGTTGGCTG+AGG 0.580874 5_3:+67040619 Msa0826560:CDS
CTGCATAATACTTGAATTTG+GGG 0.581948 5_3:+67042491 Msa0826560:CDS
TCCTGAAGACAAGCTTCTCA+TGG 0.582293 5_3:+67041978 Msa0826560:CDS
CCAGAATGATAAGGTAGTGT+CGG 0.582609 5_3:+67041099 Msa0826560:CDS
ACTGAAGCTTCCCATTGCAA+TGG 0.583069 5_3:-67041956 None:intergenic
GAGACCTACCAGTGCTAACA+AGG 0.584411 5_3:-67041725 None:intergenic
GCGGCTGAATGCCACTGGAT+GGG 0.584874 5_3:+67042731 Msa0826560:CDS
TATACCCTCTCATACTCTTG+AGG 0.587503 5_3:+67039924 Msa0826560:CDS
GCCACAGAGTTCAAGCAGGA+GGG 0.589445 5_3:+67040326 Msa0826560:CDS
ATTTCTTATAGCTGGCTCAA+AGG 0.589501 5_3:+67040679 Msa0826560:CDS
CTTCAATCTGCTCAATACCA+TGG 0.590050 5_3:+67042584 Msa0826560:CDS
TGAACTGGGAATAGAAGTGC+CGG 0.591430 5_3:+67041861 Msa0826560:CDS
TTAATACCTGCTAGTCCTAG+AGG 0.591781 5_3:-67042927 None:intergenic
GCAGAGGAGGTTCTAGCAGG+AGG 0.592342 5_3:-67039880 None:intergenic
TGCCACAGAGTTCAAGCAGG+AGG 0.593164 5_3:+67040325 Msa0826560:CDS
ACTGAAGAGAGTGGTGATGG+TGG 0.593595 5_3:-67039832 None:intergenic
TGTGTTCTCAGTACTACGAT+AGG 0.595126 5_3:+67041563 Msa0826560:CDS
GGTGATGGAATTAAGTAGCG+AGG 0.597039 5_3:+67042371 Msa0826560:CDS
GCTAGCACCAAGTTCTATGT+TGG 0.597363 5_3:-67039668 None:intergenic
GTTCTAGCAGGAGGACTAGG+AGG 0.597398 5_3:-67039871 None:intergenic
GCAGATGGTTTGCTTGTGAG+TGG 0.598056 5_3:+67040590 Msa0826560:CDS
AAGGGCTAGCATATTGCATG+CGG 0.598780 5_3:+67042712 Msa0826560:CDS
GGGTGGCCTAATGATGGTGA+TGG 0.599957 5_3:+67042356 Msa0826560:CDS
TGCGCTGAAACCAATTGTGA+AGG 0.600304 5_3:+67042173 Msa0826560:CDS
GGTACTGAAGAGAGTGGTGA+TGG 0.600448 5_3:-67039835 None:intergenic
AAGAGAAGCTTTGTCAAGGT+AGG 0.601482 5_3:-67040834 None:intergenic
TTGGCATGATGGTGTTGCCA+TGG 0.602083 5_3:+67040361 Msa0826560:CDS
AGGAGGGACCCAAATATGGT+TGG 0.602696 5_3:+67040342 Msa0826560:CDS
TGGTTATTGAGTATGCAAAA+GGG 0.603051 5_3:+67042694 Msa0826560:CDS
TCCCTCCTGCTTGAACTCTG+TGG 0.606009 5_3:-67040327 None:intergenic
ACTGGGTAAAGCCATTGCAA+TGG 0.606836 5_3:+67041945 Msa0826560:CDS
CTTTGCCACAGAGTTCAAGC+AGG 0.607083 5_3:+67040322 Msa0826560:CDS
GTTGACTCTGGAGAGTCCAG+GGG 0.607262 5_3:-67042846 None:intergenic
AAATAGGCTTAGGTGTTAGG+TGG 0.608376 5_3:-67039429 None:intergenic
TGCCAGAGAAGCTTATTCCA+AGG 0.608929 5_3:-67040232 None:intergenic
CTATTTGAATCCCCATGATG+AGG 0.609805 5_3:+67040562 Msa0826560:CDS
TCAAAGGTGATTGAAGGTAA+TGG 0.610339 5_3:+67040695 Msa0826560:CDS
AAAATAGAATAAAGGTTGTG+GGG 0.610868 5_3:-67042868 None:intergenic
AATTGAAGGCAGGAAGAACA+AGG 0.610930 5_3:-67039581 None:intergenic
ACACAAAATCTGGTCTAACA+AGG 0.612933 5_3:-67039387 None:intergenic
TAGCAAAATTTGGATAGGGG+AGG 0.614765 5_3:+67041228 Msa0826560:CDS
GGTCTCGACAGATGACATCA+TGG 0.618282 5_3:+67041819 Msa0826560:CDS
GCCGTATCTGATATTGTGGT+GGG 0.619291 5_3:+67040530 Msa0826560:CDS
TCTTGCCGTATCTGATATTG+TGG 0.621708 5_3:+67040526 Msa0826560:CDS
AAGAAATAATCATATCACAA+AGG 0.627764 5_3:+67039540 Msa0826560:five_prime_UTR
ACCAACAGAAGATTTGGCAG+AGG 0.628274 5_3:-67039896 None:intergenic
AGTTGACAAATCATAAAGAA+CGG 0.628280 5_3:-67041131 None:intergenic
GTCCAGGGGTGAAGTATCAG+TGG 0.631086 5_3:-67042832 None:intergenic
AAAGCTAGATTAGTCAAACT+GGG 0.633615 5_3:+67041928 Msa0826560:CDS
TAATACCTGCTAGTCCTAGA+GGG 0.633974 5_3:-67042926 None:intergenic
TTGACCTTGTTAGCACTGGT+AGG 0.634098 5_3:+67041721 Msa0826560:CDS
ACCCTCTCATACTCTTGAGG+GGG 0.635260 5_3:+67039927 Msa0826560:CDS
TACCCTCTCATACTCTTGAG+GGG 0.636483 5_3:+67039926 Msa0826560:CDS
AGGTGATTGAAGGTAATGGT+TGG 0.640188 5_3:+67040699 Msa0826560:CDS
TATGCACTTGCACTGGAGTG+GGG 0.642956 5_3:+67041519 Msa0826560:CDS
AACACAAATGGCCCATCCAG+TGG 0.645739 5_3:-67042742 None:intergenic
GTACTTGACAAGCTTAAACA+AGG 0.646690 5_3:+67041298 Msa0826560:CDS
GTCTTGAGAAAATATTCCCA+AGG 0.648533 5_3:-67040979 None:intergenic
ACAGGTGATTCAAGATATGG+AGG 0.649427 5_3:+67041630 Msa0826560:CDS
TTATGGAACAGAAAATCACT+AGG 0.651086 5_3:+67040207 Msa0826560:intron
TCGAACTCGACAGAGATGAA+GGG 0.652665 5_3:+67040749 Msa0826560:CDS
TTTGCAAGATAAAGGTGATG+TGG 0.656431 5_3:+67042008 Msa0826560:CDS
TAGGTTTCTTCAAGGAGACG+AGG 0.656432 5_3:-67039771 None:intergenic
TCAGAAGCACTGTTTCTCAG+TGG 0.656448 5_3:+67042641 Msa0826560:CDS
TGCATAATACTTGAATTTGG+GGG 0.659973 5_3:+67042492 Msa0826560:CDS
TCTCAGTACTACGATAGGCA+AGG 0.663522 5_3:+67041568 Msa0826560:CDS
TCTGCTGGTAGTAGTAGTGG+TGG 0.663717 5_3:-67039704 None:intergenic
AGCATGTCCTTGGAATCAGA+TGG 0.667294 5_3:+67039643 Msa0826560:CDS
CAAACTGGATTCTAACCAAG+AGG 0.668794 5_3:+67041453 Msa0826560:CDS
AGGAGGACTAGGAGGCACTG+AGG 0.676943 5_3:-67039863 None:intergenic
TCAAAGTCAATACTCATCAG+AGG 0.677618 5_3:+67040035 Msa0826560:CDS
AAACTGGATTCTAACCAAGA+GGG 0.678291 5_3:+67041454 Msa0826560:CDS
CTGGATTCTAACCAAGAGGG+TGG 0.678970 5_3:+67041457 Msa0826560:CDS
TCTGCAGGAACCTCATCATG+GGG 0.684097 5_3:-67040572 None:intergenic
TGTCAACTTGTACAACAATG+GGG 0.687555 5_3:+67041146 Msa0826560:CDS
GAAACAAACGAATTGGACAG+AGG 0.690107 5_3:-67041361 None:intergenic
GCGCTAATGTGTCTTCTGGG+TGG 0.696956 5_3:+67042339 Msa0826560:CDS
GTGTATGGTACTGAAGAGAG+TGG 0.702279 5_3:-67039841 None:intergenic
GTAATACTGTGTGTGCAACA+TGG 0.713121 5_3:+67041043 Msa0826560:CDS
AAAATCGAAATCCTTCCTCG+TGG 0.713589 5_3:-67041001 None:intergenic
AAGTAGAAGAGCAAACACCA+TGG 0.723593 5_3:-67040378 None:intergenic
CAGAGATGAAGGGCTCAATG+GGG 0.725699 5_3:+67040759 Msa0826560:CDS
GGCGGAGACAGATATCAACA+AGG 0.742179 5_3:+67041249 Msa0826560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACTCAATAAAATTTAGTT+TGG - chr5_3:67040103-67040122 None:intergenic 15.0%
!!! CTAAATTTTATTGAGTAAAA+AGG + chr5_3:67040105-67040124 Msa0826560:intron 15.0%
!!! AACCTTTATTCTATTTTTAT+TGG + chr5_3:67042874-67042893 Msa0826560:CDS 15.0%
!!! ACCTTTATTCTATTTTTATT+GGG + chr5_3:67042875-67042894 Msa0826560:CDS 15.0%
!! TAGTTATCAAAAAAGGAAAT+GGG - chr5_3:67039255-67039274 None:intergenic 20.0%
!! TTAGTTATCAAAAAAGGAAA+TGG - chr5_3:67039256-67039275 None:intergenic 20.0%
!! AAGAAATAATCATATCACAA+AGG + chr5_3:67039540-67039559 Msa0826560:five_prime_UTR 20.0%
!!! TTTTATTGAGTAAAAAGGAA+AGG + chr5_3:67040110-67040129 Msa0826560:intron 20.0%
!! AAATGAAAAAATTGATTGTG+AGG + chr5_3:67040649-67040668 Msa0826560:CDS 20.0%
!! ACATTATTACCTTTAATATC+TGG - chr5_3:67040935-67040954 None:intergenic 20.0%
!! GAAAATCAGAAAATCAAATA+TGG + chr5_3:67041607-67041626 Msa0826560:CDS 20.0%
!!! AAATTATTTGATAGTAGAGA+GGG + chr5_3:67042123-67042142 Msa0826560:CDS 20.0%
!! TGATTATAACCAAGAAAATA+TGG + chr5_3:67042430-67042449 Msa0826560:CDS 20.0%
!!! AATGTTTTTCCATATTTTCT+TGG - chr5_3:67042442-67042461 None:intergenic 20.0%
!! AAAAATAGAATAAAGGTTGT+GGG - chr5_3:67042872-67042891 None:intergenic 20.0%
!! TAAAAATAGAATAAAGGTTG+TGG - chr5_3:67042873-67042892 None:intergenic 20.0%
!!! CCTTTATTCTATTTTTATTG+GGG + chr5_3:67042876-67042895 Msa0826560:CDS 20.0%
!!! CTTTATTCTATTTTTATTGG+GGG + chr5_3:67042877-67042896 Msa0826560:CDS 20.0%
! GATGGTTTAGTTATCAAAAA+AGG - chr5_3:67039262-67039281 None:intergenic 25.0%
!! AATACAAAATCATTGAGTTG+AGG - chr5_3:67039350-67039369 None:intergenic 25.0%
! AACAAGGAAGAAAAAATGTT+TGG - chr5_3:67039374-67039393 None:intergenic 25.0%
!!! ATTTAGTTTGGTAACCAAAA+AGG - chr5_3:67040091-67040110 None:intergenic 25.0%
!!! GAACTATTTTGTTTTGTTGA+TGG + chr5_3:67040174-67040193 Msa0826560:intron 25.0%
!!! TTGTTTTGTTGATGGAATTT+TGG + chr5_3:67040182-67040201 Msa0826560:intron 25.0%
!!! TTGATGGAATTTTGGTTTTA+TGG + chr5_3:67040190-67040209 Msa0826560:intron 25.0%
!!! CCACATCTTTTTTACATATT+AGG - chr5_3:67040898-67040917 None:intergenic 25.0%
! CCTAATATGTAAAAAAGATG+TGG + chr5_3:67040895-67040914 Msa0826560:CDS 25.0%
! ATATGTAAAAAAGATGTGGA+TGG + chr5_3:67040899-67040918 Msa0826560:CDS 25.0%
! AAAGGTAATAATGTTTCAGT+TGG + chr5_3:67040941-67040960 Msa0826560:CDS 25.0%
! AGTTGACAAATCATAAAGAA+CGG - chr5_3:67041134-67041153 None:intergenic 25.0%
! CGATATAATATCAAAACCAA+TGG + chr5_3:67041201-67041220 Msa0826560:CDS 25.0%
! AAGTTAGCAAAATTTGGATA+GGG + chr5_3:67041224-67041243 Msa0826560:CDS 25.0%
!! AATTTTCACATTCTTGAACA+TGG + chr5_3:67041430-67041449 Msa0826560:CDS 25.0%
!!! TTTGATTTTCTGATTTTCCA+TGG - chr5_3:67041605-67041624 None:intergenic 25.0%
! TTGAAAAATCTGCAAAATGA+TGG + chr5_3:67041781-67041800 Msa0826560:CDS 25.0%
! TGATGGAATACATATCAAAT+TGG + chr5_3:67041798-67041817 Msa0826560:CDS 25.0%
!! CAAATTATTTGATAGTAGAG+AGG + chr5_3:67042122-67042141 Msa0826560:CDS 25.0%
! TGTGAATATTGTTGTAATCA+AGG - chr5_3:67042277-67042296 None:intergenic 25.0%
! TTGATTACAACAATATTCAC+AGG + chr5_3:67042276-67042295 Msa0826560:CDS 25.0%
! TAACAGAAATCCAATTGATT+TGG + chr5_3:67042310-67042329 Msa0826560:CDS 25.0%
!! AACAGAAATCCAATTGATTT+GGG + chr5_3:67042311-67042330 Msa0826560:CDS 25.0%
!!! ATGGAAAAACATTGTTTTTC+AGG + chr5_3:67042449-67042468 Msa0826560:CDS 25.0%
! AAAATAGAATAAAGGTTGTG+GGG - chr5_3:67042871-67042890 None:intergenic 25.0%
! CCCCAATAAAAATAGAATAA+AGG - chr5_3:67042879-67042898 None:intergenic 25.0%
!!! AACAAAAGAAGCATCATAAA+TGG - chr5_3:67042906-67042925 None:intergenic 25.0%
! TGTATACCAGTTAATAGTTT+AGG + chr5_3:67042993-67043012 Msa0826560:three_prime_UTR 25.0%
TTAAGCAAAAATGGAAGTGA+TGG - chr5_3:67039280-67039299 None:intergenic 30.0%
!! TTGGAAGTGTTAAGCAAAAA+TGG - chr5_3:67039289-67039308 None:intergenic 30.0%
CTCATACAATTAACATCAGT+TGG - chr5_3:67039308-67039327 None:intergenic 30.0%
GAGAATTTACACACAAAATC+TGG - chr5_3:67039400-67039419 None:intergenic 30.0%
ATTATGGTATGTGTCCAAAT+AGG - chr5_3:67039448-67039467 None:intergenic 30.0%
! CTGTTTTCAGACATTCATTA+TGG - chr5_3:67039464-67039483 None:intergenic 30.0%
TTTGTTAGTTGTGACAGTTA+TGG - chr5_3:67039610-67039629 None:intergenic 30.0%
ATCAATACCAACAGAAGATT+TGG - chr5_3:67039905-67039924 None:intergenic 30.0%
TGCTGAAATTGTGAAAAAGA+AGG + chr5_3:67039954-67039973 Msa0826560:CDS 30.0%
!!! ATTTGCTGTTAGATCCTTTT+TGG + chr5_3:67040074-67040093 Msa0826560:intron 30.0%
GGAAAGGATTTATTTACCAA+CGG + chr5_3:67040126-67040145 Msa0826560:intron 30.0%
TTATGGAACAGAAAATCACT+AGG + chr5_3:67040207-67040226 Msa0826560:intron 30.0%
!! AATTTCAATGCTGCTGATTT+CGG + chr5_3:67040289-67040308 Msa0826560:CDS 30.0%
! TCCTAAAAAAAGAGGACTTT+TGG + chr5_3:67040787-67040806 Msa0826560:CDS 30.0%
!!! TCCAAAAGTCCTCTTTTTTT+AGG - chr5_3:67040791-67040810 None:intergenic 30.0%
! TAAAAAGAGAAGCTTTGTCA+AGG - chr5_3:67040841-67040860 None:intergenic 30.0%
AGAGAAAGAGTAACCATAAT+TGG - chr5_3:67041073-67041092 None:intergenic 30.0%
TTTGTCAACTTGTACAACAA+TGG + chr5_3:67041144-67041163 Msa0826560:CDS 30.0%
TTGTCAACTTGTACAACAAT+GGG + chr5_3:67041145-67041164 Msa0826560:CDS 30.0%
! CAAATTTTGCTAACTTCCAT+TGG - chr5_3:67041220-67041239 None:intergenic 30.0%
CAATGGAAGTTAGCAAAATT+TGG + chr5_3:67041218-67041237 Msa0826560:CDS 30.0%
GAAGTTAGCAAAATTTGGAT+AGG + chr5_3:67041223-67041242 Msa0826560:CDS 30.0%
AGTTAGCAAAATTTGGATAG+GGG + chr5_3:67041225-67041244 Msa0826560:CDS 30.0%
AGAACACATTTCCAATATTG+TGG - chr5_3:67041551-67041570 None:intergenic 30.0%
TCAGAAAATCAAATATGGAC+AGG + chr5_3:67041612-67041631 Msa0826560:CDS 30.0%
ATTCAAGATATGGAGGATAA+TGG + chr5_3:67041637-67041656 Msa0826560:CDS 30.0%
AAAGAACTTCAAGACTTGAA+TGG + chr5_3:67041904-67041923 Msa0826560:CDS 30.0%
! AAAGCTAGATTAGTCAAACT+GGG + chr5_3:67041928-67041947 Msa0826560:CDS 30.0%
! TTCTAAAGATAGCTGATGTA+GGG + chr5_3:67042079-67042098 Msa0826560:CDS 30.0%
ATCAATTGGATTTCTGTTAG+AGG - chr5_3:67042309-67042328 None:intergenic 30.0%
TTAATTCCATCACCATCATT+AGG - chr5_3:67042365-67042384 None:intergenic 30.0%
TTGTCAAACAACCATATGAT+AGG + chr5_3:67042400-67042419 Msa0826560:CDS 30.0%
! ATCAGTTGATTCCTATCATA+TGG - chr5_3:67042414-67042433 None:intergenic 30.0%
!!! TGTTTTTCAGGTTTTGTATC+AGG + chr5_3:67042461-67042480 Msa0826560:CDS 30.0%
CCTGCATAATACTTGAATTT+GGG + chr5_3:67042490-67042509 Msa0826560:CDS 30.0%
CTGCATAATACTTGAATTTG+GGG + chr5_3:67042491-67042510 Msa0826560:CDS 30.0%
TGCATAATACTTGAATTTGG+GGG + chr5_3:67042492-67042511 Msa0826560:CDS 30.0%
GAAGAATGTATTGAAGATCA+TGG - chr5_3:67042553-67042572 None:intergenic 30.0%
TTCTGCTTTCAAAAAATCCA+TGG - chr5_3:67042604-67042623 None:intergenic 30.0%
TGGTTATTGAGTATGCAAAA+GGG + chr5_3:67042694-67042713 Msa0826560:CDS 30.0%
TATTAACTGGTATACATACC+TGG - chr5_3:67042989-67043008 None:intergenic 30.0%
GAATCACCTAAACTATTAAC+TGG - chr5_3:67043002-67043021 None:intergenic 30.0%
ATCAAAAAAGGAAATGGGAG+TGG - chr5_3:67039250-67039269 None:intergenic 35.0%
ACACAAAATCTGGTCTAACA+AGG - chr5_3:67039390-67039409 None:intergenic 35.0%
TGTTTGTAACACTTGTTCTC+AGG - chr5_3:67039498-67039517 None:intergenic 35.0%
GACAGTTATGGTTGAATTGA+AGG - chr5_3:67039598-67039617 None:intergenic 35.0%
TGGCGTAAAAGCTTATACAT+AGG + chr5_3:67039745-67039764 Msa0826560:CDS 35.0%
AGAAGTTGTAGGTTTCTTCA+AGG - chr5_3:67039782-67039801 None:intergenic 35.0%
! TAGTTTGCACTAGAAGTTGT+AGG - chr5_3:67039793-67039812 None:intergenic 35.0%
TTGAAATCTCTTCTTGAGCT+TGG + chr5_3:67039979-67039998 Msa0826560:CDS 35.0%
! ATAGTTTGTGACGTTCTTCA+TGG + chr5_3:67040012-67040031 Msa0826560:CDS 35.0%
TCAAAGTCAATACTCATCAG+AGG + chr5_3:67040035-67040054 Msa0826560:CDS 35.0%
AACAGCAAATGAAGAGGATT+AGG - chr5_3:67040064-67040083 None:intergenic 35.0%
AAGCATTCAAAAACAACCGT+TGG - chr5_3:67040145-67040164 None:intergenic 35.0%
! GCAGCATTGAAATTGTGTAA+AGG - chr5_3:67040283-67040302 None:intergenic 35.0%
ATGAAGCTGGCAAAGAAAAA+AGG + chr5_3:67040449-67040468 Msa0826560:CDS 35.0%
AAGAGCAAGATTTACAGCTT+GGG - chr5_3:67040510-67040529 None:intergenic 35.0%
TTGAGCCAGCTATAAGAAAT+GGG - chr5_3:67040679-67040698 None:intergenic 35.0%
TTTGAGCCAGCTATAAGAAA+TGG - chr5_3:67040680-67040699 None:intergenic 35.0%
! ATTTCTTATAGCTGGCTCAA+AGG + chr5_3:67040679-67040698 Msa0826560:CDS 35.0%
TCAAAGGTGATTGAAGGTAA+TGG + chr5_3:67040695-67040714 Msa0826560:CDS 35.0%
TGTAAAAAAGATGTGGATGG+TGG + chr5_3:67040902-67040921 Msa0826560:CDS 35.0%
! TGTTTCAGTTGGCTTATTGA+CGG + chr5_3:67040952-67040971 Msa0826560:CDS 35.0%
GTCTTGAGAAAATATTCCCA+AGG - chr5_3:67040982-67041001 None:intergenic 35.0%
! AATATTTTCTCAAGACCACG+AGG + chr5_3:67040986-67041005 Msa0826560:CDS 35.0%
TCTCCATTACCAGAATGATA+AGG + chr5_3:67041090-67041109 Msa0826560:CDS 35.0%
CTACCTTATCATTCTGGTAA+TGG - chr5_3:67041096-67041115 None:intergenic 35.0%
TGTCAACTTGTACAACAATG+GGG + chr5_3:67041146-67041165 Msa0826560:CDS 35.0%
GTACTTGACAAGCTTAAACA+AGG + chr5_3:67041298-67041317 Msa0826560:CDS 35.0%
TTTCCTTGGCAGAAAAAACA+TGG + chr5_3:67041380-67041399 Msa0826560:CDS 35.0%
!!! TTTCCATGTTTTTTCTGCCA+AGG - chr5_3:67041386-67041405 None:intergenic 35.0%
GGCAGAAAAAACATGGAAAA+TGG + chr5_3:67041387-67041406 Msa0826560:CDS 35.0%
AAACTGGATTCTAACCAAGA+GGG + chr5_3:67041454-67041473 Msa0826560:CDS 35.0%
!! AGTTTTGGTGAGAGATGTTA+GGG + chr5_3:67041483-67041502 Msa0826560:CDS 35.0%
TGTCTATAAGCAAGTGCAAT+TGG - chr5_3:67041670-67041689 None:intergenic 35.0%
! CTTGAAGTTCTTTTCCTTCA+AGG - chr5_3:67041897-67041916 None:intergenic 35.0%
! CAAAGCTAGATTAGTCAAAC+TGG + chr5_3:67041927-67041946 Msa0826560:CDS 35.0%
TTTGCAAGATAAAGGTGATG+TGG + chr5_3:67042008-67042027 Msa0826560:CDS 35.0%
!! GTTCTAAAGATAGCTGATGT+AGG + chr5_3:67042078-67042097 Msa0826560:CDS 35.0%
ATTGTGATATTCACTTCTGC+CGG - chr5_3:67042199-67042218 None:intergenic 35.0%
ATTCAACTTCAACTGACAGT+TGG + chr5_3:67042231-67042250 Msa0826560:CDS 35.0%
! AACTGACAGTTGGTATATCA+GGG + chr5_3:67042241-67042260 Msa0826560:CDS 35.0%
GCCTGCATAATACTTGAATT+TGG + chr5_3:67042489-67042508 Msa0826560:CDS 35.0%
CCCAAATTCAAGTATTATGC+AGG - chr5_3:67042493-67042512 None:intergenic 35.0%
CTGACAGAGAAAAACAAGTA+AGG + chr5_3:67042523-67042542 Msa0826560:CDS 35.0%
!! AGGTAGTTGTTTTGTTATGC+AGG + chr5_3:67042668-67042687 Msa0826560:CDS 35.0%
!! TTGTTTTGTTATGCAGGTAG+TGG + chr5_3:67042674-67042693 Msa0826560:CDS 35.0%
GTGGTTATTGAGTATGCAAA+AGG + chr5_3:67042693-67042712 Msa0826560:CDS 35.0%
!!! TTATGGTTGGTGCTTTTTCA+TGG + chr5_3:67042763-67042782 Msa0826560:CDS 35.0%
!!! TATGGTTGGTGCTTTTTCAT+GGG + chr5_3:67042764-67042783 Msa0826560:CDS 35.0%
!! CTTTTTCATGGGTACTTGAA+TGG + chr5_3:67042775-67042794 Msa0826560:CDS 35.0%
CATCTTAATGTAATAGTGCC+AGG + chr5_3:67042968-67042987 Msa0826560:three_prime_UTR 35.0%
AAATAGGCTTAGGTGTTAGG+TGG - chr5_3:67039432-67039451 None:intergenic 40.0%
ACCTAACACCTAAGCCTATT+TGG + chr5_3:67039431-67039450 Msa0826560:five_prime_UTR 40.0%
TCCAAATAGGCTTAGGTGTT+AGG - chr5_3:67039435-67039454 None:intergenic 40.0%
GTATGTGTCCAAATAGGCTT+AGG - chr5_3:67039442-67039461 None:intergenic 40.0%
AATTGAAGGCAGGAAGAACA+AGG - chr5_3:67039584-67039603 None:intergenic 40.0%
GTTATGGTTGAATTGAAGGC+AGG - chr5_3:67039594-67039613 None:intergenic 40.0%
GAAGCAAGTACAGCAAGAAA+TGG + chr5_3:67039725-67039744 Msa0826560:CDS 40.0%
TATACCCTCTCATACTCTTG+AGG + chr5_3:67039924-67039943 Msa0826560:CDS 40.0%
ATACCCTCTCATACTCTTGA+GGG + chr5_3:67039925-67039944 Msa0826560:CDS 40.0%
AAATCTCTTCTTGAGCTTGG+TGG + chr5_3:67039982-67040001 Msa0826560:CDS 40.0%
AATCTCTTCTTGAGCTTGGT+GGG + chr5_3:67039983-67040002 Msa0826560:CDS 40.0%
GGATCTAACAGCAAATGAAG+AGG - chr5_3:67040070-67040089 None:intergenic 40.0%
CAGAAAATCACTAGGAACCT+TGG + chr5_3:67040215-67040234 Msa0826560:intron 40.0%
AACCTTGGAATAAGCTTCTC+TGG + chr5_3:67040230-67040249 Msa0826560:CDS 40.0%
TAAGCTTCTCTGGCATTCTA+TGG + chr5_3:67040240-67040259 Msa0826560:CDS 40.0%
CCATCATGCCAACCATATTT+GGG - chr5_3:67040353-67040372 None:intergenic 40.0%
ACCATCATGCCAACCATATT+TGG - chr5_3:67040354-67040373 None:intergenic 40.0%
AAGTAGAAGAGCAAACACCA+TGG - chr5_3:67040381-67040400 None:intergenic 40.0%
!! GCTTCATCATTTTTCGCTCA+CGG - chr5_3:67040436-67040455 None:intergenic 40.0%
TGAGCGAAAAATGATGAAGC+TGG + chr5_3:67040436-67040455 Msa0826560:CDS 40.0%
CAAGAGCAAGATTTACAGCT+TGG - chr5_3:67040511-67040530 None:intergenic 40.0%
TCTTGCCGTATCTGATATTG+TGG + chr5_3:67040526-67040545 Msa0826560:CDS 40.0%
ACCCACCACAATATCAGATA+CGG - chr5_3:67040534-67040553 None:intergenic 40.0%
CTATTTGAATCCCCATGATG+AGG + chr5_3:67040562-67040581 Msa0826560:CDS 40.0%
GAGAACCCATTTCTTATAGC+TGG + chr5_3:67040671-67040690 Msa0826560:CDS 40.0%
! AGGTGATTGAAGGTAATGGT+TGG + chr5_3:67040699-67040718 Msa0826560:CDS 40.0%
! TCTGTCGAGTTCGATTTGTT+TGG - chr5_3:67040743-67040762 None:intergenic 40.0%
GGGCATCATCCTAAAAAAAG+AGG + chr5_3:67040779-67040798 Msa0826560:CDS 40.0%
GCTTTGTCAAGGTAGGAAAT+TGG - chr5_3:67040830-67040849 None:intergenic 40.0%
! AAGAGAAGCTTTGTCAAGGT+AGG - chr5_3:67040837-67040856 None:intergenic 40.0%
! AAAAAAGATGTGGATGGTGG+AGG + chr5_3:67040905-67040924 Msa0826560:CDS 40.0%
!! AAAAAGATGTGGATGGTGGA+GGG + chr5_3:67040906-67040925 Msa0826560:CDS 40.0%
AAAATCGAAATCCTTCCTCG+TGG - chr5_3:67041004-67041023 None:intergenic 40.0%
! ACGAGGAAGGATTTCGATTT+TGG + chr5_3:67041003-67041022 Msa0826560:CDS 40.0%
GTAATACTGTGTGTGCAACA+TGG + chr5_3:67041043-67041062 Msa0826560:CDS 40.0%
CCAGAATGATAAGGTAGTGT+CGG + chr5_3:67041099-67041118 Msa0826560:CDS 40.0%
AACTTGTACAACAATGGGGT+TGG + chr5_3:67041150-67041169 Msa0826560:CDS 40.0%
! GTCATCTGCATTGATGTATC+TGG + chr5_3:67041178-67041197 Msa0826560:CDS 40.0%
TAGCAAAATTTGGATAGGGG+AGG + chr5_3:67041228-67041247 Msa0826560:CDS 40.0%
GACAGATATCAACAAGGTTG+AGG + chr5_3:67041255-67041274 Msa0826560:CDS 40.0%
GACAAGCTTAAACAAGGAGT+TGG + chr5_3:67041304-67041323 Msa0826560:CDS 40.0%
GAAACAAACGAATTGGACAG+AGG - chr5_3:67041364-67041383 None:intergenic 40.0%
GTCCAATTCGTTTGTTTCCT+TGG + chr5_3:67041366-67041385 Msa0826560:CDS 40.0%
TGCCAAGGAAACAAACGAAT+TGG - chr5_3:67041371-67041390 None:intergenic 40.0%
CATTCTTGAACATGGCAAAC+TGG + chr5_3:67041438-67041457 Msa0826560:CDS 40.0%
CAAACTGGATTCTAACCAAG+AGG + chr5_3:67041453-67041472 Msa0826560:CDS 40.0%
!! GAGTTTTGGTGAGAGATGTT+AGG + chr5_3:67041482-67041501 Msa0826560:CDS 40.0%
AACAAGATATGCACTTGCAC+TGG + chr5_3:67041512-67041531 Msa0826560:CDS 40.0%
TGTGTTCTCAGTACTACGAT+AGG + chr5_3:67041563-67041582 Msa0826560:CDS 40.0%
GCAAGGAAAATGTCATTCCA+TGG + chr5_3:67041585-67041604 Msa0826560:CDS 40.0%
TGGACAGGTGATTCAAGATA+TGG + chr5_3:67041627-67041646 Msa0826560:CDS 40.0%
ACAGGTGATTCAAGATATGG+AGG + chr5_3:67041630-67041649 Msa0826560:CDS 40.0%
! AAGCAAGTGCAATTGGCTTA+AGG - chr5_3:67041663-67041682 None:intergenic 40.0%
TGAATTGACCTTGTTAGCAC+TGG + chr5_3:67041717-67041736 Msa0826560:CDS 40.0%
AAAGAAACAGCGTGTGAACT+GGG + chr5_3:67041847-67041866 Msa0826560:CDS 40.0%
AAGACAAGCTTCTCATGGTA+CGG + chr5_3:67041983-67042002 Msa0826560:CDS 40.0%
GTACGGTGTTTGCAAGATAA+AGG + chr5_3:67042000-67042019 Msa0826560:CDS 40.0%
! TTTGATAGTAGAGAGGGTTC+TGG + chr5_3:67042129-67042148 Msa0826560:CDS 40.0%
! CAACTGACAGTTGGTATATC+AGG + chr5_3:67042240-67042259 Msa0826560:CDS 40.0%
AATGCGCTAATGTGTCTTCT+GGG + chr5_3:67042336-67042355 Msa0826560:CDS 40.0%
TATTGAGCAGATTGAAGAGC+TGG - chr5_3:67042581-67042600 None:intergenic 40.0%
CTTCAATCTGCTCAATACCA+TGG + chr5_3:67042584-67042603 Msa0826560:CDS 40.0%
AGCACCAACCATAACACAAA+TGG - chr5_3:67042757-67042776 None:intergenic 40.0%
! ATGCTTCTTTTGTTCCCTCT+AGG + chr5_3:67042912-67042931 Msa0826560:CDS 40.0%
TAATACCTGCTAGTCCTAGA+GGG - chr5_3:67042929-67042948 None:intergenic 40.0%
TTAATACCTGCTAGTCCTAG+AGG - chr5_3:67042930-67042949 None:intergenic 40.0%
TCTGATTCCAAGGACATGCT+TGG - chr5_3:67039643-67039662 None:intergenic 45.0%
AGCATGTCCTTGGAATCAGA+TGG + chr5_3:67039643-67039662 Msa0826560:CDS 45.0%
! GATGGTGCCAACATAGAACT+TGG + chr5_3:67039661-67039680 Msa0826560:CDS 45.0%
GCTAGCACCAAGTTCTATGT+TGG - chr5_3:67039671-67039690 None:intergenic 45.0%
TAGGTTTCTTCAAGGAGACG+AGG - chr5_3:67039774-67039793 None:intergenic 45.0%
! GTGTATGGTACTGAAGAGAG+TGG - chr5_3:67039844-67039863 None:intergenic 45.0%
AACAGAAGATTTGGCAGAGG+AGG - chr5_3:67039896-67039915 None:intergenic 45.0%
TCCTCTGCCAAATCTTCTGT+TGG + chr5_3:67039895-67039914 Msa0826560:CDS 45.0%
ACCAACAGAAGATTTGGCAG+AGG - chr5_3:67039899-67039918 None:intergenic 45.0%
TACCCTCTCATACTCTTGAG+GGG + chr5_3:67039926-67039945 Msa0826560:CDS 45.0%
TGCCAGAGAAGCTTATTCCA+AGG - chr5_3:67040235-67040254 None:intergenic 45.0%
CTCTGTGGCAAAGGACAAAA+AGG - chr5_3:67040315-67040334 None:intergenic 45.0%
CCCAAATATGGTTGGCATGA+TGG + chr5_3:67040350-67040369 Msa0826560:CDS 45.0%
TGCCGTATCTGATATTGTGG+TGG + chr5_3:67040529-67040548 Msa0826560:CDS 45.0%
GCCGTATCTGATATTGTGGT+GGG + chr5_3:67040530-67040549 Msa0826560:CDS 45.0%
!! TGATATTGTGGTGGGTGACA+TGG + chr5_3:67040538-67040557 Msa0826560:CDS 45.0%
ATCTGCAGGAACCTCATCAT+GGG - chr5_3:67040576-67040595 None:intergenic 45.0%
TGACACTGACATCCTTGTGT+TGG + chr5_3:67040613-67040632 Msa0826560:CDS 45.0%
ATCGAACTCGACAGAGATGA+AGG + chr5_3:67040748-67040767 Msa0826560:CDS 45.0%
TCGAACTCGACAGAGATGAA+GGG + chr5_3:67040749-67040768 Msa0826560:CDS 45.0%
ACAGAGATGAAGGGCTCAAT+GGG + chr5_3:67040758-67040777 Msa0826560:CDS 45.0%
GGAGGGTTGCCAGATATTAA+AGG + chr5_3:67040923-67040942 Msa0826560:CDS 45.0%
GCTTATTGACGGAACTCCTT+GGG + chr5_3:67040963-67040982 Msa0826560:CDS 45.0%
! TTTTCTCAAGACCACGAGGA+AGG + chr5_3:67040990-67041009 Msa0826560:CDS 45.0%
!! GGAAGGATTTCGATTTTGGC+AGG + chr5_3:67041007-67041026 Msa0826560:CDS 45.0%
! GCAACATGGAGTGCCAATTA+TGG + chr5_3:67041057-67041076 Msa0826560:CDS 45.0%
CCGACACTACCTTATCATTC+TGG - chr5_3:67041102-67041121 None:intergenic 45.0%
CAAAATTTGGATAGGGGAGG+CGG + chr5_3:67041231-67041250 Msa0826560:CDS 45.0%
ATATGCACTTGCACTGGAGT+GGG + chr5_3:67041518-67041537 Msa0826560:CDS 45.0%
TCTCAGTACTACGATAGGCA+AGG + chr5_3:67041568-67041587 Msa0826560:CDS 45.0%
!! TTGACCTTGTTAGCACTGGT+AGG + chr5_3:67041721-67041740 Msa0826560:CDS 45.0%
GAAAGAAACAGCGTGTGAAC+TGG + chr5_3:67041846-67041865 Msa0826560:CDS 45.0%
! TGAACTGGGAATAGAAGTGC+CGG + chr5_3:67041861-67041880 Msa0826560:CDS 45.0%
ACTGGGTAAAGCCATTGCAA+TGG + chr5_3:67041945-67041964 Msa0826560:CDS 45.0%
CTGGGTAAAGCCATTGCAAT+GGG + chr5_3:67041946-67041965 Msa0826560:CDS 45.0%
ACTGAAGCTTCCCATTGCAA+TGG - chr5_3:67041959-67041978 None:intergenic 45.0%
TCCTGAAGACAAGCTTCTCA+TGG + chr5_3:67041978-67041997 Msa0826560:CDS 45.0%
ACCATGAGAAGCTTGTCTTC+AGG - chr5_3:67041982-67042001 None:intergenic 45.0%
TGCGCTGAAACCAATTGTGA+AGG + chr5_3:67042173-67042192 Msa0826560:CDS 45.0%
CTGAAACCAATTGTGAAGGC+CGG + chr5_3:67042177-67042196 Msa0826560:CDS 45.0%
GCGCATTCACCCAAATCAAT+TGG - chr5_3:67042323-67042342 None:intergenic 45.0%
GAATGCGCTAATGTGTCTTC+TGG + chr5_3:67042335-67042354 Msa0826560:CDS 45.0%
!! GGTGATGGAATTAAGTAGCG+AGG + chr5_3:67042371-67042390 Msa0826560:CDS 45.0%
!! TCAGAAGCACTGTTTCTCAG+TGG + chr5_3:67042641-67042660 Msa0826560:CDS 45.0%
! CACTGTTTCTCAGTGGCTTT+AGG + chr5_3:67042648-67042667 Msa0826560:CDS 45.0%
! AAGGGCTAGCATATTGCATG+CGG + chr5_3:67042712-67042731 Msa0826560:CDS 45.0%
TGGATGGGCCATTTGTGTTA+TGG + chr5_3:67042746-67042765 Msa0826560:CDS 45.0%
TGGGCCATTTGTGTTATGGT+TGG + chr5_3:67042750-67042769 Msa0826560:CDS 45.0%
GACACAACCAAGCATGTCCT+TGG + chr5_3:67039633-67039652 Msa0826560:CDS 50.0%
GTTGGCACCATCTGATTCCA+AGG - chr5_3:67039653-67039672 None:intergenic 50.0%
TCTGCTGGTAGTAGTAGTGG+TGG - chr5_3:67039707-67039726 None:intergenic 50.0%
GCTTCTGCTGGTAGTAGTAG+TGG - chr5_3:67039710-67039729 None:intergenic 50.0%
! CTTGCTGTACTTGCTTCTGC+TGG - chr5_3:67039722-67039741 None:intergenic 50.0%
!! ACTGAAGAGAGTGGTGATGG+TGG - chr5_3:67039835-67039854 None:intergenic 50.0%
! GGTACTGAAGAGAGTGGTGA+TGG - chr5_3:67039838-67039857 None:intergenic 50.0%
ACCCTCTCATACTCTTGAGG+GGG + chr5_3:67039927-67039946 Msa0826560:CDS 50.0%
! TCCCCCTCAAGAGTATGAGA+GGG - chr5_3:67039931-67039950 None:intergenic 50.0%
! ATCCCCCTCAAGAGTATGAG+AGG - chr5_3:67039932-67039951 None:intergenic 50.0%
! CTTCTTGAGCTTGGTGGGAT+TGG + chr5_3:67039988-67040007 Msa0826560:CDS 50.0%
CTGCTTGAACTCTGTGGCAA+AGG - chr5_3:67040324-67040343 None:intergenic 50.0%
CTTTGCCACAGAGTTCAAGC+AGG + chr5_3:67040322-67040341 Msa0826560:CDS 50.0%
AAGCAGGAGGGACCCAAATA+TGG + chr5_3:67040338-67040357 Msa0826560:CDS 50.0%
AGGAGGGACCCAAATATGGT+TGG + chr5_3:67040342-67040361 Msa0826560:CDS 50.0%
!! TTGGCATGATGGTGTTGCCA+TGG + chr5_3:67040361-67040380 Msa0826560:CDS 50.0%
TCTGCAGGAACCTCATCATG+GGG - chr5_3:67040575-67040594 None:intergenic 50.0%
CATCTGCAGGAACCTCATCA+TGG - chr5_3:67040577-67040596 None:intergenic 50.0%
CATGATGAGGTTCCTGCAGA+TGG + chr5_3:67040575-67040594 Msa0826560:CDS 50.0%
CTCACAAGCAAACCATCTGC+AGG - chr5_3:67040590-67040609 None:intergenic 50.0%
!! GCAGATGGTTTGCTTGTGAG+TGG + chr5_3:67040590-67040609 Msa0826560:CDS 50.0%
!! TGACATCCTTGTGTTGGCTG+AGG + chr5_3:67040619-67040638 Msa0826560:CDS 50.0%
!! GACATCCTTGTGTTGGCTGA+GGG + chr5_3:67040620-67040639 Msa0826560:CDS 50.0%
TCATTCCCTCAGCCAACACA+AGG - chr5_3:67040628-67040647 None:intergenic 50.0%
! GCTGGCTCAAAGGTGATTGA+AGG + chr5_3:67040689-67040708 Msa0826560:CDS 50.0%
GACAGAGATGAAGGGCTCAA+TGG + chr5_3:67040757-67040776 Msa0826560:CDS 50.0%
CAGAGATGAAGGGCTCAATG+GGG + chr5_3:67040759-67040778 Msa0826560:CDS 50.0%
GGCTTATTGACGGAACTCCT+TGG + chr5_3:67040962-67040981 Msa0826560:CDS 50.0%
GGCGGAGACAGATATCAACA+AGG + chr5_3:67041249-67041268 Msa0826560:CDS 50.0%
AACGAATTGGACAGAGGCGA+AGG - chr5_3:67041358-67041377 None:intergenic 50.0%
CTGGATTCTAACCAAGAGGG+TGG + chr5_3:67041457-67041476 Msa0826560:CDS 50.0%
GATTCTAACCAAGAGGGTGG+TGG + chr5_3:67041460-67041479 Msa0826560:CDS 50.0%
GATATGCACTTGCACTGGAG+TGG + chr5_3:67041517-67041536 Msa0826560:CDS 50.0%
TATGCACTTGCACTGGAGTG+GGG + chr5_3:67041519-67041538 Msa0826560:CDS 50.0%
TGGGGCTGCATCCACAATAT+TGG + chr5_3:67041537-67041556 Msa0826560:CDS 50.0%
GAGACCTACCAGTGCTAACA+AGG - chr5_3:67041728-67041747 None:intergenic 50.0%
GGTCTCGACAGATGACATCA+TGG + chr5_3:67041819-67041838 Msa0826560:CDS 50.0%
!! GGAATAGAAGTGCCGGTAGA+CGG + chr5_3:67041868-67041887 Msa0826560:CDS 50.0%
TCTTCTGGGTGGCCTAATGA+TGG + chr5_3:67042350-67042369 Msa0826560:CDS 50.0%
AACACAAATGGCCCATCCAG+TGG - chr5_3:67042745-67042764 None:intergenic 50.0%
! AAAGGTTGTGGGGTTGACTC+TGG - chr5_3:67042861-67042880 None:intergenic 50.0%
!! TTGTTCCCTCTAGGACTAGC+AGG + chr5_3:67042921-67042940 Msa0826560:CDS 50.0%
!! CTAGGAGGCACTGAGGTGTA+TGG - chr5_3:67039859-67039878 None:intergenic 55.0%
GTTCTAGCAGGAGGACTAGG+AGG - chr5_3:67039874-67039893 None:intergenic 55.0%
! GAGGTTCTAGCAGGAGGACT+AGG - chr5_3:67039877-67039896 None:intergenic 55.0%
! TTGGCAGAGGAGGTTCTAGC+AGG - chr5_3:67039886-67039905 None:intergenic 55.0%
TGCCACAGAGTTCAAGCAGG+AGG + chr5_3:67040325-67040344 Msa0826560:CDS 55.0%
GCCACAGAGTTCAAGCAGGA+GGG + chr5_3:67040326-67040345 Msa0826560:CDS 55.0%
TCCCTCCTGCTTGAACTCTG+TGG - chr5_3:67040330-67040349 None:intergenic 55.0%
CCAAAACTCCACCACCCTCT+TGG - chr5_3:67041471-67041490 None:intergenic 55.0%
!!! CCAAGAGGGTGGTGGAGTTT+TGG + chr5_3:67041468-67041487 Msa0826560:CDS 55.0%
! CCTTCAAGGTGTCCGTCTAC+CGG - chr5_3:67041883-67041902 None:intergenic 55.0%
CTTCTGCCGGCCTTCACAAT+TGG - chr5_3:67042186-67042205 None:intergenic 55.0%
GCGCTAATGTGTCTTCTGGG+TGG + chr5_3:67042339-67042358 Msa0826560:CDS 55.0%
! GGGTGGCCTAATGATGGTGA+TGG + chr5_3:67042356-67042375 Msa0826560:CDS 55.0%
CACCACTGATACTTCACCCC+TGG + chr5_3:67042830-67042849 Msa0826560:CDS 55.0%
! GTCCAGGGGTGAAGTATCAG+TGG - chr5_3:67042835-67042854 None:intergenic 55.0%
! GTTGACTCTGGAGAGTCCAG+GGG - chr5_3:67042849-67042868 None:intergenic 55.0%
! GGTTGACTCTGGAGAGTCCA+GGG - chr5_3:67042850-67042869 None:intergenic 55.0%
!! AGGAGGACTAGGAGGCACTG+AGG - chr5_3:67039866-67039885 None:intergenic 60.0%
! GCAGAGGAGGTTCTAGCAGG+AGG - chr5_3:67039883-67039902 None:intergenic 60.0%
CCGGTAGACGGACACCTTGA+AGG + chr5_3:67041880-67041899 Msa0826560:CDS 60.0%
TGCATGCGGCTGAATGCCAC+TGG + chr5_3:67042726-67042745 Msa0826560:CDS 60.0%
TGCGGCTGAATGCCACTGGA+TGG + chr5_3:67042730-67042749 Msa0826560:CDS 60.0%
GCGGCTGAATGCCACTGGAT+GGG + chr5_3:67042731-67042750 Msa0826560:CDS 60.0%
! GGGTTGACTCTGGAGAGTCC+AGG - chr5_3:67042851-67042870 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 67039213 67043038 67039213 ID=Msa0826560;Name=Msa0826560
chr5_3 mRNA 67039213 67043038 67039213 ID=Msa0826560-mRNA-1;Parent=Msa0826560;Name=Msa0826560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=418|1|1|1|1|1|2|79|1055
chr5_3 exon 67039213 67040056 67039213 ID=Msa0826560-mRNA-1:exon:21041;Parent=Msa0826560-mRNA-1
chr5_3 exon 67040218 67043038 67040218 ID=Msa0826560-mRNA-1:exon:21042;Parent=Msa0826560-mRNA-1
chr5_3 five_prime_UTR 67039213 67039630 67039213 ID=Msa0826560-mRNA-1:five_prime_utr;Parent=Msa0826560-mRNA-1
chr5_3 CDS 67039631 67040056 67039631 ID=Msa0826560-mRNA-1:cds;Parent=Msa0826560-mRNA-1
chr5_3 CDS 67040218 67042959 67040218 ID=Msa0826560-mRNA-1:cds;Parent=Msa0826560-mRNA-1
chr5_3 three_prime_UTR 67042960 67043038 67042960 ID=Msa0826560-mRNA-1:three_prime_utr;Parent=Msa0826560-mRNA-1
Gene Sequence

>Msa0826560

ATGACACAACCAAGCATGTCCTTGGAATCAGATGGTGCCAACATAGAACTTGGTGCTAGCTTACTCATTACTACCACCACTACTACTACCAGCAGAAGCAAGTACAGCAAGAAATGGCGTAAAAGCTTATACATAGGATTCCTCGTCTCCTTGAAGAAACCTACAACTTCTAGTGCAAACTATGAAGAAATAGAATCTCTTCCACCATCACCACTCTCTTCAGTACCATACACCTCAGTGCCTCCTAGTCCTCCTGCTAGAACCTCCTCTGCCAAATCTTCTGTTGGTATTGATATACCCTCTCATACTCTTGAGGGGGATATTGCTGAAATTGTGAAAAAGAAGGACTTGAAATCTCTTCTTGAGCTTGGTGGGATTGGCATAGTTTGTGACGTTCTTCATGGTCAAAGTCAATACTCATCAGAGAAAATCACTAGGAACCTTGGAATAAGCTTCTCTGGCATTCTATGGAATAGCTGCAAGCACAACCTTTACACAATTTCAATGCTGCTGATTTCGGCCTTTTTGTCCTTTGCCACAGAGTTCAAGCAGGAGGGACCCAAATATGGTTGGCATGATGGTGTTGCCATGGTGTTTGCTCTTCTACTTCTGCTTGCATTCTCTTCAATAACTAACTTTTGCCGTGAGCGAAAAATGATGAAGCTGGCAAAGAAAAAAGGTCAGTTGAAATTCAATGTTGAAAGACGTCAAGTGTCCCAAGCTGTAAATCTTGCTCTTGCCGTATCTGATATTGTGGTGGGTGACATGGTCTATTTGAATCCCCATGATGAGGTTCCTGCAGATGGTTTGCTTGTGAGTGGTGACACTGACATCCTTGTGTTGGCTGAGGGAATGAAAAATGAAAAAATTGATTGTGAGGAGAACCCATTTCTTATAGCTGGCTCAAAGGTGATTGAAGGTAATGGTTGGATGATTGTGACATCAGTTCCAAACAAATCGAACTCGACAGAGATGAAGGGCTCAATGGGGCATCATCCTAAAAAAAGAGGACTTTTGGAAAGTCTAATTGAGAAGCCAATTTCCTACCTTGACAAAGCTTCTCTTTTTATCTTTACACTTGTTGCACTTGTGTTGTTCATTCGCCTAATATGTAAAAAAGATGTGGATGGTGGAGGGTTGCCAGATATTAAAGGTAATAATGTTTCAGTTGGCTTATTGACGGAACTCCTTGGGAATATTTTCTCAAGACCACGAGGAAGGATTTCGATTTTGGCAGGTCTTTTTAGTGTTGTAATACTGTGTGTGCAACATGGAGTGCCAATTATGGTTACTCTTTCTCTCCATTACCAGAATGATAAGGTAGTGTCGGATCAAGAAGCCGTTCTTTATGATTTGTCAACTTGTACAACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCTGGCGATATAATATCAAAACCAATGGAAGTTAGCAAAATTTGGATAGGGGAGGCGGAGACAGATATCAACAAGGTTGAGGAATCAGAAACATGTCGAGTTGTACTTGACAAGCTTAAACAAGGAGTTGGTTTATCAGTTCTTGCATCAAGACTGTCTCCTTCGCCTCTGTCCAATTCGTTTGTTTCCTTGGCAGAAAAAACATGGAAAATGGACATTGAATCTTTCAGAGAAAATTTTCACATTCTTGAACATGGCAAACTGGATTCTAACCAAGAGGGTGGTGGAGTTTTGGTGAGAGATGTTAGGGACAATGAACAAGATATGCACTTGCACTGGAGTGGGGCTGCATCCACAATATTGGAAATGTGTTCTCAGTACTACGATAGGCAAGGAAAATGTCATTCCATGGAAAATCAGAAAATCAAATATGGACAGGTGATTCAAGATATGGAGGATAATGGCCTTAAGCCAATTGCACTTGCTTATAGACAAACACAAGTGCAAGAACTCAAGCAAGATGAATTGACCTTGTTAGCACTGGTAGGTCTCAAATACAAGTGTCGAGAATCGACAAAAAAAGCTTTGAAAAATCTGCAAAATGATGGAATACATATCAAATTGGTCTCGACAGATGACATCATGGTAGTGAAAGAAACAGCGTGTGAACTGGGAATAGAAGTGCCGGTAGACGGACACCTTGAAGGAAAAGAACTTCAAGACTTGAATGGCAAAGCTAGATTAGTCAAACTGGGTAAAGCCATTGCAATGGGAAGCTTCAGTCCTGAAGACAAGCTTCTCATGGTACGGTGTTTGCAAGATAAAGGTGATGTGGTTGCATTCATTGAAACACAACAGTTGATGACTAATCAAACTTCAGAAGTTCTAAAGATAGCTGATGTAGGGATAGTTCATAACTCTCTAAGCAAATTATTTGATAGTAGAGAGGGTTCTGGTTTATCTATCACATGTTTCAGTGCGCTGAAACCAATTGTGAAGGCCGGCAGAAGTGAATATCACAATATTCAAAAGTTCATTCAACTTCAACTGACAGTTGGTATATCAGGGTTACTCATAACCTTGATTACAACAATATTCACAGGAAATTCTCCTCTAACAGAAATCCAATTGATTTGGGTGAATGCGCTAATGTGTCTTCTGGGTGGCCTAATGATGGTGATGGAATTAAGTAGCGAGGAAGAGCTTGTCAAACAACCATATGATAGGAATCAACTGATTATAACCAAGAAAATATGGAAAAACATTGTTTTTCAGGTTTTGTATCAGGCTTCTGCCTGCATAATACTTGAATTTGGGGGACATATAACTGACAGAGAAAAACAAGTAAGGAAAACCATGATCTTCAATACATTCTTCTTATGCCAGCTCTTCAATCTGCTCAATACCATGGATTTTTTGAAAGCAGAAGTTTTTAAGATTGATGTTCAGAAGCACTGTTTCTCAGTGGCTTTAGGTAGTTGTTTTGTTATGCAGGTAGTGGTTATTGAGTATGCAAAAGGGCTAGCATATTGCATGCGGCTGAATGCCACTGGATGGGCCATTTGTGTTATGGTTGGTGCTTTTTCATGGGTACTTGAATGGATCTTGAATAAGATTCTTTCAGTTTTTTTCAGCACCACTGATACTTCACCCCTGGACTCTCCAGAGTCAACCCCACAACCTTTATTCTATTTTTATTGGGGGCTTCCATTTATGATGCTTCTTTTGTTCCCTCTAGGACTAGCAGGTATTAAATTTGATTGA
Protein sequence

>Msa0826560

MTQPSMSLESDGANIELGASLLITTTTTTTSRSKYSKKWRKSLYIGFLVSLKKPTTSSANYEEIESLPPSPLSSVPYTSVPPSPPARTSSAKSSVGIDIPSHTLEGDIAEIVKKKDLKSLLELGGIGIVCDVLHGQSQYSSEKITRNLGISFSGILWNSCKHNLYTISMLLISAFLSFATEFKQEGPKYGWHDGVAMVFALLLLLAFSSITNFCRERKMMKLAKKKGQLKFNVERRQVSQAVNLALAVSDIVVGDMVYLNPHDEVPADGLLVSGDTDILVLAEGMKNEKIDCEENPFLIAGSKVIEGNGWMIVTSVPNKSNSTEMKGSMGHHPKKRGLLESLIEKPISYLDKASLFIFTLVALVLFIRLICKKDVDGGGLPDIKGNNVSVGLLTELLGNIFSRPRGRISILAGLFSVVILCVQHGVPIMVTLSLHYQNDKVVSDQEAVLYDLSTCTTMGLVTVICIDVSGDIISKPMEVSKIWIGEAETDINKVEESETCRVVLDKLKQGVGLSVLASRLSPSPLSNSFVSLAEKTWKMDIESFRENFHILEHGKLDSNQEGGGVLVRDVRDNEQDMHLHWSGAASTILEMCSQYYDRQGKCHSMENQKIKYGQVIQDMEDNGLKPIALAYRQTQVQELKQDELTLLALVGLKYKCRESTKKALKNLQNDGIHIKLVSTDDIMVVKETACELGIEVPVDGHLEGKELQDLNGKARLVKLGKAIAMGSFSPEDKLLMVRCLQDKGDVVAFIETQQLMTNQTSEVLKIADVGIVHNSLSKLFDSREGSGLSITCFSALKPIVKAGRSEYHNIQKFIQLQLTVGISGLLITLITTIFTGNSPLTEIQLIWVNALMCLLGGLMMVMELSSEEELVKQPYDRNQLIITKKIWKNIVFQVLYQASACIILEFGGHITDREKQVRKTMIFNTFFLCQLFNLLNTMDFLKAEVFKIDVQKHCFSVALGSCFVMQVVVIEYAKGLAYCMRLNATGWAICVMVGAFSWVLEWILNKILSVFFSTTDTSPLDSPESTPQPLFYFYWGLPFMMLLLFPLGLAGIKFD*