AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0389490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389490 MtrunA17_Chr5g0437621 97.165 1305 36 1 2 1305 1 1305 0.0 2637
Msa0389490 MtrunA17_Chr3g0114161 55.749 1322 466 25 11 1303 16 1247 0.0 1362
Msa0389490 MtrunA17_Chr7g0224051 62.743 875 292 15 440 1304 267 1117 0.0 1073
Msa0389490 MtrunA17_Chr7g0224051 46.545 275 120 6 59 321 12 271 3.90e-63 235
Msa0389490 MtrunA17_Chr1g0191141 58.653 861 321 16 449 1303 271 1102 0.0 962
Msa0389490 MtrunA17_Chr1g0191141 47.012 251 111 6 20 258 8 248 5.92e-56 213
Msa0389490 MtrunA17_Chr7g0233031 34.450 746 398 20 585 1292 542 1234 1.46e-109 375
Msa0389490 MtrunA17_Chr7g0233021 35.745 691 367 19 627 1284 567 1213 8.59e-109 372
Msa0389490 MtrunA17_Chr7g0225791 32.645 726 424 17 584 1284 583 1268 2.15e-105 363
Msa0389490 MtrunA17_Chr4g0047081 32.895 684 406 14 627 1292 578 1226 4.07e-102 353
Msa0389490 MtrunA17_Chr7g0232971 32.349 745 434 20 585 1300 591 1294 8.95e-99 345
Msa0389490 MtrunA17_Chr7g0232991 31.669 641 373 14 686 1292 39 648 2.34e-88 301
Msa0389490 MtrunA17_Chr7g0224031 61.187 219 78 4 864 1080 25 238 7.01e-82 268
Msa0389490 MtrunA17_Chr2g0296421 30.243 701 399 22 571 1259 379 1001 4.39e-81 289
Msa0389490 MtrunA17_Chr8g0352361 30.715 713 386 23 568 1259 227 852 1.20e-79 282
Msa0389490 MtrunA17_Chr7g0233001 32.022 534 327 10 768 1290 1 509 5.28e-75 259
Msa0389490 MtrunA17_Chr7g0224021 65.094 106 35 1 698 803 10 113 2.16e-41 148
Msa0389490 MtrunA17_Chr2g0320781 34.211 228 145 2 1026 1252 17 240 5.86e-35 134
Msa0389490 MtrunA17_Chr8g0384531 24.570 582 331 19 706 1251 371 880 2.68e-32 137
Msa0389490 MtrunA17_Chr5g0393461 22.417 629 376 23 698 1289 163 716 3.95e-25 113
Msa0389490 MtrunA17_Chr1g0190391 29.762 252 143 10 701 945 564 788 3.11e-24 110
Msa0389490 MtrunA17_Chr4g0052341 24.772 549 317 22 749 1278 762 1233 6.06e-23 107
Msa0389490 MtrunA17_Chr1g0183681 23.164 531 333 19 749 1259 408 883 2.04e-20 98.6
Msa0389490 MtrunA17_Chr1g0190381 38.621 145 81 2 1122 1258 205 349 2.44e-20 96.7
Msa0389490 MtrunA17_Chr1g0205891 24.630 540 316 17 754 1285 398 854 1.01e-18 92.8
Msa0389490 MtrunA17_Chr5g0394201 24.444 540 318 17 754 1286 385 841 1.61e-18 92.0
Msa0389490 MtrunA17_Chr5g0403921 32.418 182 111 3 1107 1287 507 677 3.73e-15 80.9
Msa0389490 MtrunA17_Chr4g0017211 23.604 394 265 9 893 1260 1581 1964 5.11e-14 77.8
Msa0389490 MtrunA17_Chr4g0040301 32.374 139 88 2 1122 1260 397 529 1.21e-13 75.9
Msa0389490 MtrunA17_Chr3g0114111 86.111 36 5 0 1257 1292 1 36 2.04e-13 66.6
Msa0389490 MtrunA17_Chr5g0442141 33.846 130 79 2 1123 1251 951 1074 1.02e-12 73.6
Msa0389490 MtrunA17_Chr3g0095091 33.077 130 80 2 1123 1251 905 1028 1.16e-12 73.2
Msa0389490 MtrunA17_Chr4g0066651 27.461 193 128 3 1081 1266 1277 1464 4.56e-12 71.2
Msa0389490 MtrunA17_Chr2g0320751 40.230 87 51 1 1156 1242 896 981 8.62e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389490 AT5G20420.1 53.118 1331 521 24 4 1303 2 1260 0.0 1279
Msa0389490 AT3G42670.2 65.990 788 250 8 524 1303 477 1254 0.0 1038
Msa0389490 AT3G42670.2 42.006 319 169 6 2 320 1 303 3.27e-62 233
Msa0389490 AT3G42670.3 65.990 788 250 8 524 1303 477 1254 0.0 1038
Msa0389490 AT3G42670.3 42.006 319 169 6 2 320 1 303 3.27e-62 233
Msa0389490 AT3G42670.1 65.990 788 250 8 524 1303 477 1254 0.0 1038
Msa0389490 AT3G42670.1 42.006 319 169 6 2 320 1 303 3.27e-62 233
Msa0389490 AT3G42670.4 65.693 787 256 6 524 1303 477 1256 0.0 1037
Msa0389490 AT3G42670.4 42.006 319 169 6 2 320 1 303 3.59e-62 233
Msa0389490 AT3G24340.1 32.192 730 426 17 585 1302 453 1125 2.85e-98 341
Msa0389490 AT1G05490.1 32.206 739 420 19 587 1288 690 1384 1.40e-97 343
Msa0389490 AT2G16390.2 30.496 705 404 22 568 1259 219 850 1.89e-78 279
Msa0389490 AT2G16390.1 30.496 705 404 22 568 1259 216 847 2.89e-78 278
Msa0389490 AT2G21450.3 30.122 654 375 17 625 1259 92 682 1.57e-74 264
Msa0389490 AT2G21450.1 30.382 655 372 17 625 1259 183 773 3.47e-74 265
Msa0389490 AT2G21450.2 30.122 654 375 17 625 1259 190 780 4.25e-74 265
Msa0389490 AT1G08600.4 27.090 598 340 23 718 1258 718 1276 2.50e-45 180
Msa0389490 AT1G08600.3 27.090 598 340 23 718 1258 718 1276 2.50e-45 180
Msa0389490 AT1G08600.2 27.090 598 340 23 718 1258 718 1276 2.50e-45 180
Msa0389490 AT1G08600.1 24.667 600 331 21 718 1258 718 1255 7.12e-38 155
Msa0389490 AT5G63950.1 24.399 582 325 22 709 1251 367 872 7.92e-27 119
Msa0389490 AT5G63950.2 24.740 578 311 23 709 1251 367 855 1.08e-26 119
Msa0389490 AT3G06010.1 24.908 542 314 21 754 1286 425 882 2.89e-18 91.7
Msa0389490 AT3G19210.1 34.247 146 88 2 1154 1299 579 716 4.15e-16 84.7
Msa0389490 AT3G19210.2 34.247 146 88 2 1154 1299 577 714 4.39e-16 84.3
Msa0389490 AT3G19210.3 34.247 146 88 2 1154 1299 579 716 5.39e-16 84.0
Msa0389490 AT1G03750.1 31.013 158 102 3 1101 1257 523 674 2.13e-14 79.0
Msa0389490 AT5G66750.1 31.818 176 113 3 1121 1295 540 709 8.89e-14 76.6
Msa0389490 AT2G13370.1 29.885 174 112 4 1096 1265 927 1094 5.91e-13 74.7
Msa0389490 AT2G13370.2 29.885 174 112 4 1096 1265 927 1094 5.91e-13 74.7
Msa0389490 AT2G13370.3 29.885 174 112 4 1096 1265 927 1094 5.91e-13 74.7
Msa0389490 AT2G28290.2 26.389 216 148 6 1081 1289 1042 1253 4.37e-12 72.0
Msa0389490 AT2G28290.3 26.389 216 148 6 1081 1289 1042 1253 4.49e-12 72.0
Msa0389490 AT2G28290.4 26.389 216 148 6 1081 1289 1042 1253 4.49e-12 72.0
Msa0389490 AT2G28290.6 26.389 216 148 6 1081 1289 1043 1254 4.49e-12 72.0
Msa0389490 AT2G28290.1 26.389 216 148 6 1081 1289 1042 1253 4.57e-12 72.0
Msa0389490 AT2G28290.5 26.389 216 148 6 1081 1289 1043 1254 4.61e-12 71.6
Msa0389490 AT5G44800.1 27.619 210 133 7 1081 1278 975 1177 7.40e-12 71.2
Msa0389490 AT3G57300.1 30.612 147 92 3 1121 1265 1222 1360 1.43e-11 70.1
Msa0389490 AT3G57300.4 30.612 147 92 3 1121 1265 1222 1360 1.43e-11 70.1
Msa0389490 AT3G57300.2 30.612 147 92 3 1121 1265 1255 1393 1.59e-11 69.7
Msa0389490 AT5G19310.2 33.577 137 84 1 1154 1290 475 604 1.78e-11 69.3
Msa0389490 AT5G19310.1 33.577 137 84 1 1154 1290 739 868 1.81e-11 69.7
Msa0389490 AT2G18760.3 36.458 96 60 1 1164 1259 840 934 5.45e-11 68.2
Msa0389490 AT2G18760.4 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0389490 AT2G18760.1 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0389490 AT2G18760.2 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0389490 AT2G18760.7 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0389490 AT2G18760.5 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0389490 AT2G18760.6 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8

Find 271 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGATGGTGTATCAAATTT+TGG 0.090524 3_1:+94332289 Msa0389490:CDS
CACAAGTCTTCTTCCCCTTT+TGG 0.131162 3_1:-94332760 None:intergenic
AATTACCTTTATCTCTATTT+TGG 0.144716 3_1:+94329553 Msa0389490:five_prime_UTR
GTTTGCACACCGAAAGTTTA+TGG 0.152463 3_1:+94334680 Msa0389490:CDS
CTTTATCAGACATTCGTTTA+AGG 0.216380 3_1:+94331602 Msa0389490:CDS
GGTGAATATTCGCGGTTAAT+AGG 0.217595 3_1:-94329279 None:intergenic
AGTCCAAGTTGTTAAATATT+TGG 0.219268 3_1:+94329250 Msa0389490:five_prime_UTR
TTGGATTAACATCTCTGATA+TGG 0.220811 3_1:-94333673 None:intergenic
TACAAGTTTGATTTGAAAAT+AGG 0.232991 3_1:+94335350 Msa0389490:CDS
ACCAAACACCAAATTGCTTT+TGG 0.233126 3_1:+94332184 Msa0389490:CDS
CGATGATGTCAAGCATGTTT+TGG 0.250231 3_1:+94334563 Msa0389490:CDS
GAACTTTCCCAAAAGCAATT+TGG 0.266172 3_1:-94332192 None:intergenic
AATAGATTGGATGAAGAAAT+TGG 0.272442 3_1:+94333617 Msa0389490:CDS
CACAGGTAGTTTGGATGATA+TGG 0.277316 3_1:+94333075 Msa0389490:CDS
GCTGGCCTTCTGACATTTGA+TGG 0.281978 3_1:-94332687 None:intergenic
CCGACAAGCATTCGGTTTGC+TGG 0.293333 3_1:-94332705 None:intergenic
GAATTGAGAATATTGCTTTC+CGG 0.294300 3_1:+94334807 Msa0389490:CDS
GCATTTGAAGCAGTTATCTT+TGG 0.295235 3_1:+94331487 Msa0389490:intron
GGTTTCAAATGCAATTGTTT+TGG 0.298462 3_1:+94333553 Msa0389490:intron
CCCAAAAGCAATTTGGTGTT+TGG 0.300581 3_1:-94332185 None:intergenic
GTGAATATTCGCGGTTAATA+GGG 0.303539 3_1:-94329278 None:intergenic
AACACTTCGTGAGGGAATTT+CGG 0.305259 3_1:-94334885 None:intergenic
TCGTCCTGGTCAGCAGAAAA+TGG 0.306006 3_1:+94335721 Msa0389490:CDS
GAATGCTTGTCGGGAGCTTC+TGG 0.310694 3_1:+94332715 Msa0389490:CDS
AACCTTGATTTGGTACTTCT+AGG 0.320287 3_1:-94334756 None:intergenic
AGGAAAGGAGTAGGCCAAAA+AGG 0.323674 3_1:+94334939 Msa0389490:CDS
CATTTCATCTACTACTGCTT+TGG 0.327480 3_1:-94332609 None:intergenic
TTTCTTTGGCGAAACGTTGC+AGG 0.327818 3_1:+94334243 Msa0389490:CDS
GAAACTCAAAAGCTTTCTTT+TGG 0.332440 3_1:-94334224 None:intergenic
AAGGAAGAGCACAGGTAGTT+TGG 0.335049 3_1:+94333066 Msa0389490:CDS
TGTAAGGATGTCAAAGTATT+CGG 0.335589 3_1:+94332068 Msa0389490:CDS
TTTCATTCTTCATGATCATA+TGG 0.351437 3_1:-94335934 None:intergenic
ATATGGATCTTGGAAATAGA+TGG 0.353135 3_1:+94333092 Msa0389490:CDS
AGTTCTTAATCGATCTTTCA+TGG 0.353313 3_1:+94332210 Msa0389490:CDS
TTCTCGTGATGAACCGATAT+CGG 0.354901 3_1:+94334143 Msa0389490:CDS
TCTTACCAAAATAGAGATAA+AGG 0.358309 3_1:-94329558 None:intergenic
CTTTGAACGTGGGAAAATAA+TGG 0.359666 3_1:+94335544 Msa0389490:CDS
AAGTACTTTGGATGGCAAAA+AGG 0.360471 3_1:+94335485 Msa0389490:CDS
AGATTGAAGATGATATTCTA+AGG 0.360520 3_1:+94335879 Msa0389490:CDS
AATACAGTTGCTACTCTTCC+TGG 0.363378 3_1:+94334525 Msa0389490:CDS
TGAGGTAATAATAATGTTGC+TGG 0.374932 3_1:-94329451 None:intergenic
TCGTAATGCTCAACGGCTAT+TGG 0.376136 3_1:-94332851 None:intergenic
ATTTAAACCAACTGAATCAT+TGG 0.378535 3_1:-94331707 None:intergenic
TTCTTCCACTGGTCAGTGAT+AGG 0.381885 3_1:-94333301 None:intergenic
CATCACACTGCTTCTCCTCT+TGG 0.382571 3_1:-94334053 None:intergenic
AGTTTGGATGATATGGATCT+TGG 0.384784 3_1:+94333082 Msa0389490:CDS
GGAAAGCAATATTCTCAATT+CGG 0.386118 3_1:-94334805 None:intergenic
TAGCTACCTGAAGTTATTCC+CGG 0.388228 3_1:+94334374 Msa0389490:CDS
TGAATCAAGTACACCGGTAT+AGG 0.394727 3_1:-94334471 None:intergenic
CTTCTAGCAACGTTGCCGTT+TGG 0.395047 3_1:-94332875 None:intergenic
TACTTCGCAGTATAGTCATT+TGG 0.402392 3_1:+94332922 Msa0389490:CDS
TGCTCCTGTTTCTTACGTCC+TGG 0.403001 3_1:+94331649 Msa0389490:CDS
ATTCTGCTTGAACACCCTAT+AGG 0.408396 3_1:-94334505 None:intergenic
TTGTGTTACATTTCTTCCAC+TGG 0.408645 3_1:-94333312 None:intergenic
GCCGCAGAGCAGTCCGGAAA+AGG 0.412132 3_1:+94332661 Msa0389490:CDS
CAGAATCTCATGCTGTATAT+CGG 0.414243 3_1:-94335174 None:intergenic
AGCACGCATACGTCGATTCC+AGG 0.418601 3_1:-94331667 None:intergenic
CAGCAAACCGAATGCTTGTC+GGG 0.422319 3_1:+94332706 Msa0389490:CDS
ATGCAACTGCACGAACTTCA+AGG 0.425193 3_1:+94329328 Msa0389490:five_prime_UTR
TGGCTGTACATGCCTGCGTT+TGG 0.429276 3_1:-94332507 None:intergenic
GAATATTTCGAGAAGTACTT+TGG 0.429814 3_1:+94335473 Msa0389490:CDS
ACACTTGAGCCATAAACTTT+CGG 0.433248 3_1:-94334689 None:intergenic
AGATGATATTCTAAGGGAAA+TGG 0.434151 3_1:+94335886 Msa0389490:CDS
TCATGGTCGTAGAACCTATA+GGG 0.434888 3_1:+94334491 Msa0389490:CDS
ACTCTTTCCAAGTGGTTCTT+CGG 0.435241 3_1:-94335793 None:intergenic
GGTTTATGTTTATCAGCTCT+TGG 0.436984 3_1:+94335742 Msa0389490:CDS
GTTTATCAGCTCTTGGTGAC+AGG 0.443817 3_1:+94335749 Msa0389490:CDS
AGAAATGAGAACTCTTTGTA+AGG 0.443918 3_1:+94332052 Msa0389490:CDS
ATACCGGTGTACTTGATTCA+TGG 0.445701 3_1:+94334474 Msa0389490:CDS
ACCTTGATTTGGTACTTCTA+GGG 0.446221 3_1:-94334755 None:intergenic
TTTATCGATGTTTATGAAGC+AGG 0.449793 3_1:+94335098 Msa0389490:CDS
GGGAGCTTCTGGTGTACAAT+AGG 0.449977 3_1:+94332726 Msa0389490:CDS
CCGGACTGCTCTGCGGCAAA+CGG 0.450320 3_1:-94332655 None:intergenic
GAATTAATGACCAAACGCTT+TGG 0.451444 3_1:-94334173 None:intergenic
AGATAATCACCATATGGTTA+TGG 0.453918 3_1:+94331570 Msa0389490:CDS
ATCATCTTCATCATCCTTGG+TGG 0.454382 3_1:-94334094 None:intergenic
CGGAAGAAAACCAAAGCGTT+TGG 0.455256 3_1:+94334163 Msa0389490:CDS
AGGAAAATTGACTCTAATGT+TGG 0.456402 3_1:+94335026 Msa0389490:CDS
GAAAATAATGGATAAATTTG+AGG 0.459943 3_1:+94335556 Msa0389490:CDS
ACCCTAAATACAAGAGGAAA+AGG 0.460092 3_1:+94334919 Msa0389490:CDS
TCATCATCTTATAATGTTGA+CGG 0.460428 3_1:+94332473 Msa0389490:CDS
GGAAGTTCTGATGGTTTACC+AGG 0.461190 3_1:+94335119 Msa0389490:CDS
GATTCCAGGACGTAAGAAAC+AGG 0.463849 3_1:-94331653 None:intergenic
TATTCTTGAAATAAGCGAAC+AGG 0.465250 3_1:-94335455 None:intergenic
TTGGATGTTTCTATCCTGAC+AGG 0.466403 3_1:-94332590 None:intergenic
CTTGACATCATCGGTAGGCT+TGG 0.467522 3_1:-94334553 None:intergenic
GTTGGAGAGGAAAGAATTCA+AGG 0.467850 3_1:+94335044 Msa0389490:CDS
ACACGAGCACTCTGAGCCAT+GGG 0.470862 3_1:-94331985 None:intergenic
TCTTCCCCGGGAATAACTTC+AGG 0.477453 3_1:-94334380 None:intergenic
GAGGGAAAGTCCTGGACTCT+TGG 0.479228 3_1:+94334713 Msa0389490:CDS
ACATCCGAGTGTTCTAATCA+TGG 0.479550 3_1:+94334617 Msa0389490:CDS
GTCATCATCTTCATCATCCT+TGG 0.479586 3_1:-94334097 None:intergenic
TTGTGGCGGTGTTGATCAAA+AGG 0.480329 3_1:+94332778 Msa0389490:CDS
CAGACATTCGTTTAAGGTCA+AGG 0.481109 3_1:+94331608 Msa0389490:CDS
CCGCAGAGCAGTCCGGAAAA+GGG 0.482980 3_1:+94332662 Msa0389490:CDS
CACTTGGATCAATACATCCT+TGG 0.483200 3_1:+94335261 Msa0389490:CDS
TTTCACAGATAATCACCATA+TGG 0.483667 3_1:+94331564 Msa0389490:CDS
TAGGAGGGCTAAAACCCAAA+AGG 0.484813 3_1:+94332745 Msa0389490:CDS
AGAAGCTCCCGACAAGCATT+CGG 0.485361 3_1:-94332713 None:intergenic
ACGTGCATGATCAGCTCTCT+TGG 0.486701 3_1:-94332429 None:intergenic
GGACCAAATATTTAACAACT+TGG 0.489632 3_1:-94329253 None:intergenic
CACCTTTGTCCATAACCATA+TGG 0.489824 3_1:-94331579 None:intergenic
CTGAATCATTGGCTCGTTGA+GGG 0.490012 3_1:-94331696 None:intergenic
GAGTTCATAAAAGTTAAATC+AGG 0.490264 3_1:+94331526 Msa0389490:CDS
GTTGCAGGGTCTACAAATCC+AGG 0.493284 3_1:+94334258 Msa0389490:CDS
TTCATGGTCGTAGAACCTAT+AGG 0.495823 3_1:+94334490 Msa0389490:CDS
AGGAGGGCTAAAACCCAAAA+GGG 0.498084 3_1:+94332746 Msa0389490:CDS
CAACGAGCCAATGATTCAGT+TGG 0.498221 3_1:+94331700 Msa0389490:CDS
AAACAATGATGAACAGAAAG+AGG 0.499384 3_1:+94330905 Msa0389490:exon
AGCTGTCAAACTAATTCCTT+CGG 0.501364 3_1:-94335627 None:intergenic
TTGACATCATCGGTAGGCTT+GGG 0.501969 3_1:-94334552 None:intergenic
TTAGAAACATGCCACCTGTC+AGG 0.502705 3_1:+94332576 Msa0389490:CDS
AAGCAGTTATCTTTGGCTCA+TGG 0.503439 3_1:+94331494 Msa0389490:CDS
TTCAAAGAGCTCGAGTTCCC+CGG 0.503714 3_1:-94335528 None:intergenic
ATTGGATCAGCATCTTGATC+AGG 0.504734 3_1:-94332833 None:intergenic
ATTGCACGTGCGTTTCGTCC+TGG 0.505656 3_1:+94335707 Msa0389490:CDS
TGGATTAACATCTCTGATAT+GGG 0.506421 3_1:-94333672 None:intergenic
TATGATCATGAAGAATGAAA+AGG 0.508729 3_1:+94335937 Msa0389490:CDS
ATCCTCTCCATGAGAAATCT+CGG 0.510077 3_1:-94333362 None:intergenic
GACACGAGCACTCTGAGCCA+TGG 0.510084 3_1:-94331986 None:intergenic
TGGATCAATACATCCTTGGC+TGG 0.513481 3_1:+94335265 Msa0389490:CDS
CCAGCAAACCGAATGCTTGT+CGG 0.515745 3_1:+94332705 Msa0389490:CDS
TTGTGAACATGATAATAGAT+TGG 0.516132 3_1:+94333604 Msa0389490:CDS
GCAATATTTGATCGAGTCAC+GGG 0.516637 3_1:+94334974 Msa0389490:CDS
GCTCTTGGTGACAGGTTCGT+TGG 0.516936 3_1:+94335757 Msa0389490:CDS
ATCAAAAGCTCTAACTCGAG+AGG 0.518196 3_1:-94335236 None:intergenic
TCTTAACAACACGGTAGATA+AGG 0.519104 3_1:-94335397 None:intergenic
GAACTAGAGGTCTCTTCCCC+GGG 0.519512 3_1:-94334392 None:intergenic
TCGGTAGGCTTGGGAACTCC+AGG 0.523809 3_1:-94334543 None:intergenic
CCGTGTTGTTAAGAACGAAA+AGG 0.524491 3_1:+94335406 Msa0389490:CDS
CAAGTGGGAGATTCCTATAC+CGG 0.524870 3_1:+94334458 Msa0389490:CDS
AAGAAATGTAACACAACAAA+CGG 0.524918 3_1:+94333319 Msa0389490:CDS
CCGTTTGCCGCAGAGCAGTC+CGG 0.525321 3_1:+94332655 Msa0389490:CDS
ATGGATAAATTTGAGGAGCC+TGG 0.525717 3_1:+94335563 Msa0389490:CDS
CTTTGGCTCATGGCATCCTG+TGG 0.526654 3_1:+94331504 Msa0389490:CDS
AGCGAACAGGCGCAATGTTG+TGG 0.527089 3_1:-94335442 None:intergenic
AGCTTCTGGTGTACAATAGG+AGG 0.528440 3_1:+94332729 Msa0389490:CDS
AGCTACCTGAAGTTATTCCC+GGG 0.528782 3_1:+94334375 Msa0389490:CDS
GTTTATGGCTCAAGTGTTGA+GGG 0.528816 3_1:+94334695 Msa0389490:CDS
GATTCGGCTTCAATTAGCCC+TGG 0.529383 3_1:-94334276 None:intergenic
CTTGGTGACAGGTTCGTTGG+AGG 0.531022 3_1:+94335760 Msa0389490:CDS
AGAACTAGAGGTCTCTTCCC+CGG 0.532388 3_1:-94334393 None:intergenic
ATTTCGAGAAGTACTTTGGA+TGG 0.534334 3_1:+94335477 Msa0389490:CDS
TCAATCACAGCTTGTGCCGA+AGG 0.534805 3_1:+94335611 Msa0389490:CDS
TAATAATGTTGCTGGAAATG+AGG 0.535076 3_1:-94329443 None:intergenic
AGTTTATGGCTCAAGTGTTG+AGG 0.535176 3_1:+94334694 Msa0389490:CDS
TATGAAGCAGGAAGTTCTGA+TGG 0.535273 3_1:+94335110 Msa0389490:CDS
ATAGGAGGTTCTTCTATGAC+AGG 0.535482 3_1:-94333283 None:intergenic
TATATTGAACAAGGTTCACT+TGG 0.536450 3_1:+94332026 Msa0389490:CDS
AGTGTATAAATTTGTAAACC+TGG 0.536546 3_1:-94335137 None:intergenic
AGAGAAGAGAGAAGAAGATG+AGG 0.537744 3_1:-94329469 None:intergenic
ATGTTGAGAAATGTGACAAA+TGG 0.537792 3_1:+94335074 Msa0389490:CDS
TCAACTCATTTAAGAAATAA+CGG 0.539258 3_1:+94333166 Msa0389490:CDS
TCATCTTCATCATCCTTGGT+GGG 0.540466 3_1:-94334093 None:intergenic
CGCAATATTTGATCGAGTCA+CGG 0.541175 3_1:+94334973 Msa0389490:CDS
GGACTCTTGGTACTTGATGA+AGG 0.541459 3_1:+94334726 Msa0389490:CDS
TATTCTAAGGGAAATGGTTG+AGG 0.543285 3_1:+94335892 Msa0389490:CDS
GTGGAAACCGAGATTTCTCA+TGG 0.543372 3_1:+94333355 Msa0389490:CDS
CGGTTAGTACTAAAACTTCA+CGG 0.543504 3_1:-94335508 None:intergenic
TAATATTCTGTAAATACGAA+TGG 0.543929 3_1:-94333252 None:intergenic
ATACTTCAACACTCTATGCT+TGG 0.544106 3_1:+94334857 Msa0389490:CDS
TTCCACTGGTCAGTGATAGG+AGG 0.547139 3_1:-94333298 None:intergenic
GAAGTTAAAGAGTTGGATGT+TGG 0.547524 3_1:+94332548 Msa0389490:CDS
GACAGGTGGCATGTTTCTAA+AGG 0.548270 3_1:-94332573 None:intergenic
TGGCTGCGAAGTTAAAGAGT+TGG 0.548459 3_1:+94332541 Msa0389490:CDS
TATGGATCTTGGAAATAGAT+GGG 0.548949 3_1:+94333093 Msa0389490:CDS
CATCACGAGAAGTGTCGGTC+GGG 0.549470 3_1:-94334131 None:intergenic
CTCGGATGAAGACCACCGAT+GGG 0.551911 3_1:-94332147 None:intergenic
CGGTTCATCACGAGAAGTGT+CGG 0.553602 3_1:-94334136 None:intergenic
CATCCGAGTGTTCTAATCAT+GGG 0.556634 3_1:+94334618 Msa0389490:CDS
TGTAACACAACAAACGGTGT+TGG 0.558100 3_1:+94333325 Msa0389490:CDS
ATATCTCATACTCCTGGAGC+CGG 0.558114 3_1:+94334321 Msa0389490:CDS
AGCGACATGTTTAAGTGCAG+TGG 0.558265 3_1:+94335209 Msa0389490:CDS
ACCCTAGAAGTACCAAATCA+AGG 0.558435 3_1:+94334754 Msa0389490:CDS
GATGTTTCTATCCTGACAGG+TGG 0.561215 3_1:-94332587 None:intergenic
TGTGTGATATCTCATACTCC+TGG 0.561503 3_1:+94334315 Msa0389490:CDS
TTCATGGTTAGTTGTTACAT+CGG 0.564104 3_1:+94332226 Msa0389490:CDS
GATCTTGGAAATAGATGGGA+AGG 0.564793 3_1:+94333097 Msa0389490:CDS
TCTTCTTAGATACAATCGCT+AGG 0.565118 3_1:+94335006 Msa0389490:CDS
TCGCAGCCAACGTAACGCTC+TGG 0.565753 3_1:-94332527 None:intergenic
CAAAACATGCTTGACATCAT+CGG 0.566712 3_1:-94334562 None:intergenic
CAAGAGGAGAAGCAGTGTGA+TGG 0.568341 3_1:+94334054 Msa0389490:CDS
ACTGAATCATTGGCTCGTTG+AGG 0.568958 3_1:-94331697 None:intergenic
ATCGAAGACAGGATTTCATG+AGG 0.569999 3_1:+94333132 Msa0389490:CDS
AAACGGTGTTGGACAAAATG+TGG 0.570352 3_1:+94333336 Msa0389490:CDS
TTCTTTGGCGAAACGTTGCA+GGG 0.571447 3_1:+94334244 Msa0389490:CDS
ATAGCAACTTGAGAAACAAT+CGG 0.574210 3_1:-94332398 None:intergenic
TTCTCAGCTTGCCAACGAGA+AGG 0.574330 3_1:-94335857 None:intergenic
CCTCGGATGAAGACCACCGA+TGG 0.578288 3_1:-94332148 None:intergenic
GAATCATTGGCTCGTTGAGG+GGG 0.580007 3_1:-94331694 None:intergenic
TTTCAGTGAGGCGTTTGTCG+AGG 0.580078 3_1:+94335832 Msa0389490:CDS
CACCATATGGTTATGGACAA+AGG 0.580592 3_1:+94331577 Msa0389490:CDS
TCAGCATCTTGATCAGGAAG+AGG 0.582114 3_1:-94332827 None:intergenic
GATTGAAGATGATATTCTAA+GGG 0.582615 3_1:+94335880 Msa0389490:CDS
AACTCGAGCTCTTTGAACGT+GGG 0.583915 3_1:+94335534 Msa0389490:CDS
AAGAGGAAAAGGAAAGGAGT+AGG 0.584586 3_1:+94334930 Msa0389490:CDS
TCATCAAGTACCAAGAGTCC+AGG 0.586811 3_1:-94334723 None:intergenic
TGAATATTCGCGGTTAATAG+GGG 0.587116 3_1:-94329277 None:intergenic
CGGTACTAACATGCCATCGT+CGG 0.591646 3_1:-94332378 None:intergenic
CATGTGAAAATCAGCCCCAT+CGG 0.591882 3_1:+94332132 Msa0389490:CDS
AAACGGAACAAGAATGATAA+CGG 0.591966 3_1:-94332638 None:intergenic
AGTATCTTTGATACTCCACC+AGG 0.592133 3_1:-94335581 None:intergenic
TGAATCATTGGCTCGTTGAG+GGG 0.592171 3_1:-94331695 None:intergenic
AATGCTTTCAACACTTCGTG+AGG 0.592963 3_1:-94334894 None:intergenic
GAAAGAACTTGAAGTGTCAC+TGG 0.593151 3_1:+94333417 Msa0389490:CDS
GAACTCGAGCTCTTTGAACG+TGG 0.594844 3_1:+94335533 Msa0389490:CDS
GGTATAAAGAATTTATCAAG+TGG 0.595054 3_1:+94334442 Msa0389490:CDS
AACCGAGATTTCTCATGGAG+AGG 0.595400 3_1:+94333360 Msa0389490:CDS
AAGCTGAAATGGATATGTTG+TGG 0.597378 3_1:+94333395 Msa0389490:CDS
TCTAAGGGAAATGGTTGAGG+AGG 0.597803 3_1:+94335895 Msa0389490:CDS
GTTTGGATCGTAATGCTCAA+CGG 0.598237 3_1:-94332858 None:intergenic
ATAAGTACCGAAGAACCACT+TGG 0.600109 3_1:+94335786 Msa0389490:CDS
AAGTTACAAAGGAAGAGCAC+AGG 0.600175 3_1:+94333058 Msa0389490:CDS
GGAAGAGGAATAATAGCAAG+TGG 0.600471 3_1:-94332812 None:intergenic
ATTGACATCGTGAAGAAACA+TGG 0.600782 3_1:-94333021 None:intergenic
TCGAAGACAGGATTTCATGA+GGG 0.600969 3_1:+94333133 Msa0389490:CDS
GTAGTGGTGGTGAATATTCG+CGG 0.601159 3_1:-94329287 None:intergenic
GTGAAAATCAGCCCCATCGG+TGG 0.602877 3_1:+94332135 Msa0389490:CDS
TTGTCGAGGATCCTTCTCGT+TGG 0.606121 3_1:+94335846 Msa0389490:CDS
AATTGACTCTAATGTTGGAG+AGG 0.608578 3_1:+94335031 Msa0389490:CDS
GTTGAGCATTACGATCCAAA+CGG 0.610151 3_1:+94332860 Msa0389490:CDS
GAGTCTCATATTGATGTCAT+CGG 0.611926 3_1:+94332347 Msa0389490:CDS
TCATCACGAGAAGTGTCGGT+CGG 0.612178 3_1:-94334132 None:intergenic
CGACACCCACTCTTTCCAAG+TGG 0.614649 3_1:-94335801 None:intergenic
CCATCGGTGGTCTTCATCCG+AGG 0.614878 3_1:+94332148 Msa0389490:CDS
CATTAGACCCTAAATACAAG+AGG 0.615011 3_1:+94334913 Msa0389490:CDS
ATCGGATTCAAAACCGACGA+TGG 0.615258 3_1:+94332365 Msa0389490:CDS
GTCAACTTCTATATTGAACA+AGG 0.615983 3_1:+94332017 Msa0389490:CDS
GGGTGCCATCAAATGTCAGA+AGG 0.616154 3_1:+94332682 Msa0389490:CDS
CAAGTGTTGAGGGAAAGTCC+TGG 0.616594 3_1:+94334705 Msa0389490:CDS
TCAAAAGCTCTAACTCGAGA+GGG 0.618528 3_1:-94335235 None:intergenic
TTGGCTCTACTAAGTTACAA+AGG 0.618837 3_1:+94333047 Msa0389490:CDS
TGGTAATGAAGAGCAATCCT+CGG 0.619389 3_1:-94332165 None:intergenic
GAAGAACCACTTGGAAAGAG+TGG 0.620292 3_1:+94335795 Msa0389490:CDS
ATGCTTTCAACACTTCGTGA+GGG 0.623531 3_1:-94334893 None:intergenic
GGAATATACTGCTGTAGATG+TGG 0.625004 3_1:+94333638 Msa0389490:CDS
CATTTAAGAAATAACGGCGA+AGG 0.625072 3_1:+94333172 Msa0389490:CDS
AAATTCAGTGTGGCGCCAAG+AGG 0.625626 3_1:+94334038 Msa0389490:CDS
GTATAAAGAATTTATCAAGT+GGG 0.625662 3_1:+94334443 Msa0389490:CDS
AAGATCAGTAGAAAACAAGA+TGG 0.627489 3_1:+94332274 Msa0389490:CDS
TAGCCCATGATTAGAACACT+CGG 0.632210 3_1:-94334621 None:intergenic
GCTTCTGGTGTACAATAGGA+GGG 0.641634 3_1:+94332730 Msa0389490:CDS
AAGAACCACTTGGAAAGAGT+GGG 0.646979 3_1:+94335796 Msa0389490:CDS
AAATACAAGAGGAAAAGGAA+AGG 0.649041 3_1:+94334924 Msa0389490:CDS
TGGTTAATAATCCTAAACCA+AGG 0.650473 3_1:+94332942 Msa0389490:CDS
TAAAGACAGAACTTTAAATG+CGG 0.651133 3_1:+94333210 Msa0389490:CDS
GATAAATTTGAGGAGCCTGG+TGG 0.654281 3_1:+94335566 Msa0389490:CDS
ACATGCTTGACATCATCGGT+AGG 0.656056 3_1:-94334558 None:intergenic
CAAAAGGGGAAGAAGACTTG+TGG 0.658195 3_1:+94332761 Msa0389490:CDS
GCTACCTGAAGTTATTCCCG+GGG 0.659114 3_1:+94334376 Msa0389490:CDS
TTGCAGGGTCTACAAATCCA+GGG 0.660559 3_1:+94334259 Msa0389490:CDS
GCTTACGACGTTCCAAACGC+AGG 0.660746 3_1:+94332495 Msa0389490:CDS
TGCATCTCGTGTGATCATGT+TGG 0.662663 3_1:+94335649 Msa0389490:CDS
AAGTTGCTCATATACAACAT+TGG 0.665395 3_1:+94330875 Msa0389490:five_prime_UTR
AAGGGGAAGAAGACTTGTGG+CGG 0.670203 3_1:+94332764 Msa0389490:CDS
GGAGGGCTAAAACCCAAAAG+GGG 0.676635 3_1:+94332747 Msa0389490:CDS
ATATTCGCGGTTAATAGGGG+AGG 0.679036 3_1:-94329274 None:intergenic
AACCTCCTATCACTGACCAG+TGG 0.680042 3_1:+94333296 Msa0389490:CDS
GTACAGCCAGAGCGTTACGT+TGG 0.681484 3_1:+94332521 Msa0389490:CDS
CGACCATGAATCAAGTACAC+CGG 0.682151 3_1:-94334477 None:intergenic
GATGACATCAATATGAGACT+CGG 0.684735 3_1:-94332345 None:intergenic
ATTAACATCTCTGATATGGG+TGG 0.685046 3_1:-94333669 None:intergenic
TCCTTGGCTGGTCAAAACTG+CGG 0.685458 3_1:+94335277 Msa0389490:CDS
CACGAGCACTCTGAGCCATG+GGG 0.689089 3_1:-94331984 None:intergenic
GAAACAGGAGCAATCTGACA+CGG 0.695086 3_1:-94331638 None:intergenic
ATGGATCAAACTCTTGTATG+CGG 0.695811 3_1:-94333233 None:intergenic
AGATAAAGAAGAGCCCACCA+AGG 0.706701 3_1:+94334080 Msa0389490:CDS
TCGGATGAAGACCACCGATG+GGG 0.711748 3_1:-94332146 None:intergenic
TCTATACAGAGAAAGCCCCA+TGG 0.713635 3_1:+94331969 Msa0389490:CDS
TGATCATGTTGGATTCCGAG+TGG 0.740440 3_1:+94335660 Msa0389490:CDS
GGCAGGTTGAAAATTCAGTG+TGG 0.744598 3_1:+94334028 Msa0389490:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTTTACCATAAA+AGG - chr3_1:94330053-94330072 None:intergenic 10.0%
!! AATATGATTATATAAAGTTT+AGG + chr3_1:94330085-94330104 Msa0389490:intron 10.0%
!!! ACATAGTTTTTTTTTTTTTT+CGG + chr3_1:94330267-94330286 Msa0389490:intron 10.0%
!! TTCATTAATTAATATTGAAA+AGG + chr3_1:94330638-94330657 Msa0389490:intron 10.0%
!!! TTATCTTTTATTATAGAAAA+AGG + chr3_1:94333967-94333986 Msa0389490:intron 10.0%
!! AACATTAAATTTATGATTCA+TGG - chr3_1:94330225-94330244 None:intergenic 15.0%
!! TGAATCATAAATTTAATGTT+TGG + chr3_1:94330225-94330244 Msa0389490:intron 15.0%
!! GAATCATAAATTTAATGTTT+GGG + chr3_1:94330226-94330245 Msa0389490:intron 15.0%
!! AATCATAAATTTAATGTTTG+GGG + chr3_1:94330227-94330246 Msa0389490:intron 15.0%
!! TATTAATTAATGAAAGCTTA+GGG - chr3_1:94330632-94330651 None:intergenic 15.0%
!! ATATTAATTAATGAAAGCTT+AGG - chr3_1:94330633-94330652 None:intergenic 15.0%
!!! AAAATTTAAGGTATATCTTA+CGG + chr3_1:94331896-94331915 Msa0389490:intron 15.0%
!!! TTTCTTTTTAATTATAGGTT+TGG + chr3_1:94331928-94331947 Msa0389490:intron 15.0%
!!! TTCTTTTTAATTATAGGTTT+GGG + chr3_1:94331929-94331948 Msa0389490:intron 15.0%
!!! AATTACCTTTATCTCTATTT+TGG + chr3_1:94329553-94329572 Msa0389490:five_prime_UTR 20.0%
!!! TTTTTTTTTCACTTTGACTT+AGG + chr3_1:94329721-94329740 Msa0389490:intron 20.0%
!!! CTTTTGGAAAAACAATAAAA+AGG - chr3_1:94329785-94329804 None:intergenic 20.0%
!! CTAAAAGTCATTCTTAAAAT+AGG - chr3_1:94329830-94329849 None:intergenic 20.0%
!! ATATAAAGTTTAGGTGAATT+AGG + chr3_1:94330094-94330113 Msa0389490:intron 20.0%
!! ATCATAAATTTAATGTTTGG+GGG + chr3_1:94330228-94330247 Msa0389490:intron 20.0%
!!! AGTTTTTTTTTTTTTTCGGA+AGG + chr3_1:94330271-94330290 Msa0389490:intron 20.0%
!! AAATTATGAATAAAATGCTC+TGG - chr3_1:94330324-94330343 None:intergenic 20.0%
!!! ATAATTTTGCTTTCATCTTT+TGG + chr3_1:94330337-94330356 Msa0389490:intron 20.0%
!! TATCTATAGATCATTTAGAA+CGG - chr3_1:94330768-94330787 None:intergenic 20.0%
!! TTGAACAGAATAAATATCAA+TGG + chr3_1:94331015-94331034 Msa0389490:intron 20.0%
!!! AAAATTTTGAGGAAGTTAAT+AGG - chr3_1:94331456-94331475 None:intergenic 20.0%
!! TCAACTCATTTAAGAAATAA+CGG + chr3_1:94333166-94333185 Msa0389490:CDS 20.0%
!! TAATATTCTGTAAATACGAA+TGG - chr3_1:94333255-94333274 None:intergenic 20.0%
!!! TTTGAAACCTGATAAAATAA+TGG - chr3_1:94333542-94333561 None:intergenic 20.0%
!! TAAACTTGACTTACAAAAAT+TGG - chr3_1:94333695-94333714 None:intergenic 20.0%
!! AATAAGCTAAAAACATCTTA+TGG - chr3_1:94333880-94333899 None:intergenic 20.0%
!! GTATAAAGAATTTATCAAGT+GGG + chr3_1:94334443-94334462 Msa0389490:CDS 20.0%
!!! ATTATTTTGAAACAAAGTAC+CGG - chr3_1:94334829-94334848 None:intergenic 20.0%
!!! TTCTCAGAAATTTTTAACAA+AGG + chr3_1:94335304-94335323 Msa0389490:CDS 20.0%
!!! TACAAGTTTGATTTGAAAAT+AGG + chr3_1:94335350-94335369 Msa0389490:CDS 20.0%
!!! GAAAATAATGGATAAATTTG+AGG + chr3_1:94335556-94335575 Msa0389490:CDS 20.0%
! AGTCCAAGTTGTTAAATATT+TGG + chr3_1:94329250-94329269 Msa0389490:five_prime_UTR 25.0%
! TCTTACCAAAATAGAGATAA+AGG - chr3_1:94329561-94329580 None:intergenic 25.0%
! TAGGTTCATGAAGAAAAAAT+TGG + chr3_1:94329740-94329759 Msa0389490:intron 25.0%
!!! AAAAATTGGACTGATTTTTG+TGG + chr3_1:94329754-94329773 Msa0389490:intron 25.0%
!!! ACTTTTAGCATGTTTTTTTC+TGG + chr3_1:94329842-94329861 Msa0389490:intron 25.0%
!!! CTTTTAGCATGTTTTTTTCT+GGG + chr3_1:94329843-94329862 Msa0389490:intron 25.0%
!!! TTTTAGCATGTTTTTTTCTG+GGG + chr3_1:94329844-94329863 Msa0389490:intron 25.0%
! CTTAAAAAGATTGTCAATCA+AGG + chr3_1:94330147-94330166 Msa0389490:intron 25.0%
! TAGTTTATCGATAAATGATC+CGG + chr3_1:94330447-94330466 Msa0389490:intron 25.0%
!!! GATATATGAGACTTTTTTGT+TGG - chr3_1:94330517-94330536 None:intergenic 25.0%
! TCATTTGATCAAAAAGAAAG+AGG - chr3_1:94330979-94330998 None:intergenic 25.0%
! TCTGATTCTACAATACTAAA+AGG + chr3_1:94331050-94331069 Msa0389490:intron 25.0%
! AAAATGATTAAGTGCTTGTT+TGG + chr3_1:94331084-94331103 Msa0389490:intron 25.0%
! AATAAGCTGAAAACAACTTA+TGG - chr3_1:94331182-94331201 None:intergenic 25.0%
! GAGTTCATAAAAGTTAAATC+AGG + chr3_1:94331526-94331545 Msa0389490:CDS 25.0%
! ATTTAAACCAACTGAATCAT+TGG - chr3_1:94331710-94331729 None:intergenic 25.0%
! ATCTTAAAATGAACACTTAC+AGG - chr3_1:94331739-94331758 None:intergenic 25.0%
! CTGTTACAATTGTTACTATA+AGG - chr3_1:94331823-94331842 None:intergenic 25.0%
! TTTAATTGATGAACTGTAGT+TGG + chr3_1:94331873-94331892 Msa0389490:intron 25.0%
! AACTGTAGTTGGAAAATTTA+AGG + chr3_1:94331884-94331903 Msa0389490:intron 25.0%
!! AAGATGGTGTATCAAATTTT+GGG + chr3_1:94332290-94332309 Msa0389490:CDS 25.0%
! TCATCATCTTATAATGTTGA+CGG + chr3_1:94332473-94332492 Msa0389490:CDS 25.0%
!! AACAAATTGATGTTTTTCCT+TGG - chr3_1:94332962-94332981 None:intergenic 25.0%
! ATAAAAAGAAAATCGAAGAC+AGG + chr3_1:94333121-94333140 Msa0389490:CDS 25.0%
! TAAAGACAGAACTTTAAATG+CGG + chr3_1:94333210-94333229 Msa0389490:CDS 25.0%
! AAGAAATGTAACACAACAAA+CGG + chr3_1:94333319-94333338 Msa0389490:CDS 25.0%
! AGAAAAAACATAAGGAACTA+AGG - chr3_1:94333494-94333513 None:intergenic 25.0%
! GAAAACAGAGAAAAAACATA+AGG - chr3_1:94333502-94333521 None:intergenic 25.0%
!!! TTTTTTCTCTGTTTTCTCTA+AGG + chr3_1:94333506-94333525 Msa0389490:intron 25.0%
!!! ATCAGTTCCATTATTTTATC+AGG + chr3_1:94333532-94333551 Msa0389490:intron 25.0%
! TTGTGAACATGATAATAGAT+TGG + chr3_1:94333604-94333623 Msa0389490:CDS 25.0%
! AATAGATTGGATGAAGAAAT+TGG + chr3_1:94333617-94333636 Msa0389490:CDS 25.0%
! TTTCTTTCATTCTTGTATTC+TGG + chr3_1:94333770-94333789 Msa0389490:intron 25.0%
! TATGATAATCTTGTTGGTAT+TGG + chr3_1:94334007-94334026 Msa0389490:intron 25.0%
! GGTATAAAGAATTTATCAAG+TGG + chr3_1:94334442-94334461 Msa0389490:CDS 25.0%
! AGTGTATAAATTTGTAAACC+TGG - chr3_1:94335140-94335159 None:intergenic 25.0%
! AGATTGAAGATGATATTCTA+AGG + chr3_1:94335879-94335898 Msa0389490:CDS 25.0%
! GATTGAAGATGATATTCTAA+GGG + chr3_1:94335880-94335899 Msa0389490:CDS 25.0%
! TTTCATTCTTCATGATCATA+TGG - chr3_1:94335937-94335956 None:intergenic 25.0%
! TATGATCATGAAGAATGAAA+AGG + chr3_1:94335937-94335956 Msa0389490:CDS 25.0%
GGACCAAATATTTAACAACT+TGG - chr3_1:94329256-94329275 None:intergenic 30.0%
TAATAATGTTGCTGGAAATG+AGG - chr3_1:94329446-94329465 None:intergenic 30.0%
TGAGGTAATAATAATGTTGC+TGG - chr3_1:94329454-94329473 None:intergenic 30.0%
!! GATCATGTTTTTGATTGACT+TGG + chr3_1:94329672-94329691 Msa0389490:intron 30.0%
!! GCAATCTTTTTCATCTCTTT+TGG - chr3_1:94329801-94329820 None:intergenic 30.0%
!!! TTTAGCATGTTTTTTTCTGG+GGG + chr3_1:94329845-94329864 Msa0389490:intron 30.0%
TGCTAATTGTGTGCATAAAT+TGG + chr3_1:94329885-94329904 Msa0389490:intron 30.0%
AATTGAGCCTAGATTATCAA+AGG - chr3_1:94330023-94330042 None:intergenic 30.0%
! TTTGATAATCTAGGCTCAAT+TGG + chr3_1:94330022-94330041 Msa0389490:intron 30.0%
!! TCAATTGGTAGTACCTTTTA+TGG + chr3_1:94330037-94330056 Msa0389490:intron 30.0%
!! GACAATCTTTTTAAGCCTTA+AGG - chr3_1:94330142-94330161 None:intergenic 30.0%
!! CAAATTCTTCTGTTGATTTG+AGG - chr3_1:94330200-94330219 None:intergenic 30.0%
ATGAATAAAATGCTCTGGTA+GGG - chr3_1:94330319-94330338 None:intergenic 30.0%
TATGAATAAAATGCTCTGGT+AGG - chr3_1:94330320-94330339 None:intergenic 30.0%
! ATTTTGCTTTCATCTTTTGG+AGG + chr3_1:94330340-94330359 Msa0389490:intron 30.0%
!! ACCTCACTTTTGAAGATTAT+TGG + chr3_1:94330551-94330570 Msa0389490:intron 30.0%
!! CCTCACTTTTGAAGATTATT+GGG + chr3_1:94330552-94330571 Msa0389490:intron 30.0%
TCATTGATATACAGATGCAA+TGG - chr3_1:94330792-94330811 None:intergenic 30.0%
AAGTTGCTCATATACAACAT+TGG + chr3_1:94330875-94330894 Msa0389490:five_prime_UTR 30.0%
AAACAATGATGAACAGAAAG+AGG + chr3_1:94330905-94330924 Msa0389490:exon 30.0%
GATCAAAAAGAAAGAGGAAA+AGG - chr3_1:94330973-94330992 None:intergenic 30.0%
GATAGCTTATGAAAAGCTTA+TGG - chr3_1:94331206-94331225 None:intergenic 30.0%
! AAGCTTTTCATAAGCTATCT+TGG + chr3_1:94331207-94331226 Msa0389490:intron 30.0%
! TTAAGTTGTTTATCCAAGCA+CGG + chr3_1:94331344-94331363 Msa0389490:intron 30.0%
TAGATTAATAAATCCGTGCT+TGG - chr3_1:94331360-94331379 None:intergenic 30.0%
GCACGGATTTATTAATCTAT+AGG + chr3_1:94331361-94331380 Msa0389490:intron 30.0%
AGAATGTGATTGTATGATCA+TGG - chr3_1:94331411-94331430 None:intergenic 30.0%
! TGTTCAGAAGGAAAATTTTG+AGG - chr3_1:94331467-94331486 None:intergenic 30.0%
! TTAACTTTTATGAACTCCAC+AGG - chr3_1:94331523-94331542 None:intergenic 30.0%
TTTCACAGATAATCACCATA+TGG + chr3_1:94331564-94331583 Msa0389490:CDS 30.0%
AGATAATCACCATATGGTTA+TGG + chr3_1:94331570-94331589 Msa0389490:CDS 30.0%
CTTTATCAGACATTCGTTTA+AGG + chr3_1:94331602-94331621 Msa0389490:CDS 30.0%
GTCAACTTCTATATTGAACA+AGG + chr3_1:94332017-94332036 Msa0389490:CDS 30.0%
TATATTGAACAAGGTTCACT+TGG + chr3_1:94332026-94332045 Msa0389490:CDS 30.0%
AGAAATGAGAACTCTTTGTA+AGG + chr3_1:94332052-94332071 Msa0389490:CDS 30.0%
! TGTAAGGATGTCAAAGTATT+CGG + chr3_1:94332068-94332087 Msa0389490:CDS 30.0%
AGTTCTTAATCGATCTTTCA+TGG + chr3_1:94332210-94332229 Msa0389490:CDS 30.0%
! TTCATGGTTAGTTGTTACAT+CGG + chr3_1:94332226-94332245 Msa0389490:CDS 30.0%
AAGATCAGTAGAAAACAAGA+TGG + chr3_1:94332274-94332293 Msa0389490:CDS 30.0%
! CAAGATGGTGTATCAAATTT+TGG + chr3_1:94332289-94332308 Msa0389490:CDS 30.0%
ATAGCAACTTGAGAAACAAT+CGG - chr3_1:94332401-94332420 None:intergenic 30.0%
AAACGGAACAAGAATGATAA+CGG - chr3_1:94332641-94332660 None:intergenic 30.0%
TGGTTAATAATCCTAAACCA+AGG + chr3_1:94332942-94332961 Msa0389490:CDS 30.0%
! TTGATGTTTTTCCTTGGTTT+AGG - chr3_1:94332956-94332975 None:intergenic 30.0%
!!! TCTTCACGATGTCAATTTTT+TGG + chr3_1:94333028-94333047 Msa0389490:CDS 30.0%
ATATGGATCTTGGAAATAGA+TGG + chr3_1:94333092-94333111 Msa0389490:CDS 30.0%
TATGGATCTTGGAAATAGAT+GGG + chr3_1:94333093-94333112 Msa0389490:CDS 30.0%
TGATGTAGAAAAAGCTGAAA+TGG + chr3_1:94333384-94333403 Msa0389490:CDS 30.0%
AAGGAACTAAGGAAAAACAA+TGG - chr3_1:94333483-94333502 None:intergenic 30.0%
! GGTTTCAAATGCAATTGTTT+TGG + chr3_1:94333553-94333572 Msa0389490:intron 30.0%
TGGATTAACATCTCTGATAT+GGG - chr3_1:94333675-94333694 None:intergenic 30.0%
TTGGATTAACATCTCTGATA+TGG - chr3_1:94333676-94333695 None:intergenic 30.0%
TTCTATACATTGCATCTAGA+TGG + chr3_1:94333794-94333813 Msa0389490:intron 30.0%
CACTTGTATGATAATCTTGT+TGG + chr3_1:94334001-94334020 Msa0389490:intron 30.0%
! GAAACTCAAAAGCTTTCTTT+TGG - chr3_1:94334227-94334246 None:intergenic 30.0%
!!! AGAAAGCTTTTGAGTTTCTT+TGG + chr3_1:94334229-94334248 Msa0389490:CDS 30.0%
! GATGATGAGAAAAGTTTTTC+CGG - chr3_1:94334343-94334362 None:intergenic 30.0%
GGAAAGCAATATTCTCAATT+CGG - chr3_1:94334808-94334827 None:intergenic 30.0%
GAATTGAGAATATTGCTTTC+CGG + chr3_1:94334807-94334826 Msa0389490:CDS 30.0%
! TCCTTTTCCTCTTGTATTTA+GGG - chr3_1:94334923-94334942 None:intergenic 30.0%
! TTCCTTTTCCTCTTGTATTT+AGG - chr3_1:94334924-94334943 None:intergenic 30.0%
AAATACAAGAGGAAAAGGAA+AGG + chr3_1:94334924-94334943 Msa0389490:CDS 30.0%
! AGGAAAATTGACTCTAATGT+TGG + chr3_1:94335026-94335045 Msa0389490:CDS 30.0%
ATGTTGAGAAATGTGACAAA+TGG + chr3_1:94335074-94335093 Msa0389490:CDS 30.0%
TTTATCGATGTTTATGAAGC+AGG + chr3_1:94335098-94335117 Msa0389490:CDS 30.0%
!! TTAGAGCTTTTGATAACACT+TGG + chr3_1:94335245-94335264 Msa0389490:CDS 30.0%
TATTCTTGAAATAAGCGAAC+AGG - chr3_1:94335458-94335477 None:intergenic 30.0%
!! GAATATTTCGAGAAGTACTT+TGG + chr3_1:94335473-94335492 Msa0389490:CDS 30.0%
! AGATGATATTCTAAGGGAAA+TGG + chr3_1:94335886-94335905 Msa0389490:CDS 30.0%
TGAATATTCGCGGTTAATAG+GGG - chr3_1:94329280-94329299 None:intergenic 35.0%
GTGAATATTCGCGGTTAATA+GGG - chr3_1:94329281-94329300 None:intergenic 35.0%
AAAAAGAGGAGCAGAGAAAA+AGG - chr3_1:94329354-94329373 None:intergenic 35.0%
GTGAAAGCTGACATAAAAAG+AGG - chr3_1:94329368-94329387 None:intergenic 35.0%
! AACACTGCCTTTGATAATCT+AGG + chr3_1:94330013-94330032 Msa0389490:intron 35.0%
!! GATTTGAGGAACTTGTTGAT+AGG - chr3_1:94330186-94330205 None:intergenic 35.0%
! TTGTTATGACACGATTTTGC+TGG + chr3_1:94330414-94330433 Msa0389490:intron 35.0%
! TGTTATGACACGATTTTGCT+GGG + chr3_1:94330415-94330434 Msa0389490:intron 35.0%
CCCAATAATCTTCAAAAGTG+AGG - chr3_1:94330555-94330574 None:intergenic 35.0%
!! ACTTTTGAAGATTATTGGGC+CGG + chr3_1:94330556-94330575 Msa0389490:intron 35.0%
AATGAAAGCTTAGGGTTTAC+AGG - chr3_1:94330624-94330643 None:intergenic 35.0%
AAGACACGAAACAAAGCAAA+CGG - chr3_1:94330738-94330757 None:intergenic 35.0%
GAAATTTCCACTTACAGTCA+AGG - chr3_1:94330836-94330855 None:intergenic 35.0%
AAGAAAGAGGAAAAGGCTTA+CGG - chr3_1:94330966-94330985 None:intergenic 35.0%
AAGCACTAGTGAAACTGTTT+GGG + chr3_1:94331127-94331146 Msa0389490:intron 35.0%
AAACTGTTTGGGAGAACTTA+TGG + chr3_1:94331138-94331157 Msa0389490:intron 35.0%
GTATGATCATGGAAAACTGA+AGG - chr3_1:94331400-94331419 None:intergenic 35.0%
! GCATTTGAAGCAGTTATCTT+TGG + chr3_1:94331487-94331506 Msa0389490:intron 35.0%
ACTCTCAGGGAAAAAAATAC+AGG - chr3_1:94331773-94331792 None:intergenic 35.0%
!!! ATGGACTGTGTTCGATTTTT+TGG - chr3_1:94332115-94332134 None:intergenic 35.0%
! ACCAAACACCAAATTGCTTT+TGG + chr3_1:94332184-94332203 Msa0389490:CDS 35.0%
!! CCAAACACCAAATTGCTTTT+GGG + chr3_1:94332185-94332204 Msa0389490:CDS 35.0%
GAACTTTCCCAAAAGCAATT+TGG - chr3_1:94332195-94332214 None:intergenic 35.0%
! ATGGTGTATCAAATTTTGGG+AGG + chr3_1:94332293-94332312 Msa0389490:CDS 35.0%
GATGACATCAATATGAGACT+CGG - chr3_1:94332348-94332367 None:intergenic 35.0%
GAGTCTCATATTGATGTCAT+CGG + chr3_1:94332347-94332366 Msa0389490:CDS 35.0%
GAAGTTAAAGAGTTGGATGT+TGG + chr3_1:94332548-94332567 Msa0389490:CDS 35.0%
CATTTCATCTACTACTGCTT+TGG - chr3_1:94332612-94332631 None:intergenic 35.0%
TACTTCGCAGTATAGTCATT+TGG + chr3_1:94332922-94332941 Msa0389490:CDS 35.0%
ATTGACATCGTGAAGAAACA+TGG - chr3_1:94333024-94333043 None:intergenic 35.0%
!! TTGGCTCTACTAAGTTACAA+AGG + chr3_1:94333047-94333066 Msa0389490:CDS 35.0%
AGTTTGGATGATATGGATCT+TGG + chr3_1:94333082-94333101 Msa0389490:CDS 35.0%
CATTTAAGAAATAACGGCGA+AGG + chr3_1:94333172-94333191 Msa0389490:CDS 35.0%
TTGTGTTACATTTCTTCCAC+TGG - chr3_1:94333315-94333334 None:intergenic 35.0%
AAGCTGAAATGGATATGTTG+TGG + chr3_1:94333395-94333414 Msa0389490:CDS 35.0%
!!! GAGTTATTTTGATGACTCAG+AGG + chr3_1:94333444-94333463 Msa0389490:CDS 35.0%
! ACTTCTTCTAAGTTTTCCTC+AGG - chr3_1:94333584-94333603 None:intergenic 35.0%
ATTAACATCTCTGATATGGG+TGG - chr3_1:94333672-94333691 None:intergenic 35.0%
AGACTATTTGAGAGAGCTTA+TGG + chr3_1:94333836-94333855 Msa0389490:intron 35.0%
!! CTTATTTCTATACGCTTTCC+AGG + chr3_1:94333894-94333913 Msa0389490:intron 35.0%
! GTTGATTTCATAAGCTATCC+TGG - chr3_1:94333915-94333934 None:intergenic 35.0%
!! ATAATCTTGTTGGTATTGGC+AGG + chr3_1:94334011-94334030 Msa0389490:intron 35.0%
!!! CTTTGGTTTTCTTCCGATAT+CGG - chr3_1:94334159-94334178 None:intergenic 35.0%
GAATTAATGACCAAACGCTT+TGG - chr3_1:94334176-94334195 None:intergenic 35.0%
! TGCAATTTTTCTCTGAGTTC+AGG - chr3_1:94334198-94334217 None:intergenic 35.0%
! CAAGTATAGAGCGTAGTTTT+TGG - chr3_1:94334423-94334442 None:intergenic 35.0%
CAAAAACTACGCTCTATACT+TGG + chr3_1:94334421-94334440 Msa0389490:CDS 35.0%
CAAAACATGCTTGACATCAT+CGG - chr3_1:94334565-94334584 None:intergenic 35.0%
! GTTTTTAACATTGATGCGAG+AGG + chr3_1:94334650-94334669 Msa0389490:CDS 35.0%
ACACTTGAGCCATAAACTTT+CGG - chr3_1:94334692-94334711 None:intergenic 35.0%
!! ACCTTGATTTGGTACTTCTA+GGG - chr3_1:94334758-94334777 None:intergenic 35.0%
!! AACCTTGATTTGGTACTTCT+AGG - chr3_1:94334759-94334778 None:intergenic 35.0%
! ACATTTTCGCAACCTTGATT+TGG - chr3_1:94334769-94334788 None:intergenic 35.0%
ATACTTCAACACTCTATGCT+TGG + chr3_1:94334857-94334876 Msa0389490:CDS 35.0%
CATTAGACCCTAAATACAAG+AGG + chr3_1:94334913-94334932 Msa0389490:CDS 35.0%
ACCCTAAATACAAGAGGAAA+AGG + chr3_1:94334919-94334938 Msa0389490:CDS 35.0%
TCTTCTTAGATACAATCGCT+AGG + chr3_1:94335006-94335025 Msa0389490:CDS 35.0%
! AATTGACTCTAATGTTGGAG+AGG + chr3_1:94335031-94335050 Msa0389490:CDS 35.0%
CAGAATCTCATGCTGTATAT+CGG - chr3_1:94335177-94335196 None:intergenic 35.0%
TCTTAACAACACGGTAGATA+AGG - chr3_1:94335400-94335419 None:intergenic 35.0%
! CCTTTTCGTTCTTAACAACA+CGG - chr3_1:94335409-94335428 None:intergenic 35.0%
!! ATTTCGAGAAGTACTTTGGA+TGG + chr3_1:94335477-94335496 Msa0389490:CDS 35.0%
AAGTACTTTGGATGGCAAAA+AGG + chr3_1:94335485-94335504 Msa0389490:CDS 35.0%
CGGTTAGTACTAAAACTTCA+CGG - chr3_1:94335511-94335530 None:intergenic 35.0%
!! CGTGAAGTTTTAGTACTAAC+CGG + chr3_1:94335509-94335528 Msa0389490:CDS 35.0%
!! GTGAAGTTTTAGTACTAACC+GGG + chr3_1:94335510-94335529 Msa0389490:CDS 35.0%
!! TGAAGTTTTAGTACTAACCG+GGG + chr3_1:94335511-94335530 Msa0389490:CDS 35.0%
CTTTGAACGTGGGAAAATAA+TGG + chr3_1:94335544-94335563 Msa0389490:CDS 35.0%
AGCTGTCAAACTAATTCCTT+CGG - chr3_1:94335630-94335649 None:intergenic 35.0%
GGTTTATGTTTATCAGCTCT+TGG + chr3_1:94335742-94335761 Msa0389490:CDS 35.0%
! TATTCTAAGGGAAATGGTTG+AGG + chr3_1:94335892-94335911 Msa0389490:CDS 35.0%
GGTGAATATTCGCGGTTAAT+AGG - chr3_1:94329282-94329301 None:intergenic 40.0%
AGAGAAGAGAGAAGAAGATG+AGG - chr3_1:94329472-94329491 None:intergenic 40.0%
TATCAAAGGCAGTGTTGTGT+TGG - chr3_1:94330009-94330028 None:intergenic 40.0%
TTATCGATAAATGATCCGGC+CGG + chr3_1:94330451-94330470 Msa0389490:intron 40.0%
TATAAATACTCCCAGCTCCA+GGG - chr3_1:94330589-94330608 None:intergenic 40.0%
ATGTAAGCCTTGACTGTAAG+TGG + chr3_1:94330826-94330845 Msa0389490:intron 40.0%
CAAGCACTAGTGAAACTGTT+TGG + chr3_1:94331126-94331145 Msa0389490:intron 40.0%
TGCTTCAAATGCTGTTCAGA+AGG - chr3_1:94331479-94331498 None:intergenic 40.0%
! AAGCAGTTATCTTTGGCTCA+TGG + chr3_1:94331494-94331513 Msa0389490:CDS 40.0%
CACCATATGGTTATGGACAA+AGG + chr3_1:94331577-94331596 Msa0389490:CDS 40.0%
CACCTTTGTCCATAACCATA+TGG - chr3_1:94331582-94331601 None:intergenic 40.0%
! CAGACATTCGTTTAAGGTCA+AGG + chr3_1:94331608-94331627 Msa0389490:CDS 40.0%
!!! GTGTTCGATTTTTTGGAGGA+TGG - chr3_1:94332108-94332127 None:intergenic 40.0%
!!! GACTGTGTTCGATTTTTTGG+AGG - chr3_1:94332112-94332131 None:intergenic 40.0%
! TGGTAATGAAGAGCAATCCT+CGG - chr3_1:94332168-94332187 None:intergenic 40.0%
!! CCCAAAAGCAATTTGGTGTT+TGG - chr3_1:94332188-94332207 None:intergenic 40.0%
! TTGGATGTTTCTATCCTGAC+AGG - chr3_1:94332593-94332612 None:intergenic 40.0%
! ACAAGTCTTCTTCCCCTTTT+GGG - chr3_1:94332762-94332781 None:intergenic 40.0%
GGAAGAGGAATAATAGCAAG+TGG - chr3_1:94332815-94332834 None:intergenic 40.0%
ATTGGATCAGCATCTTGATC+AGG - chr3_1:94332836-94332855 None:intergenic 40.0%
GTTTGGATCGTAATGCTCAA+CGG - chr3_1:94332861-94332880 None:intergenic 40.0%
GTTGAGCATTACGATCCAAA+CGG + chr3_1:94332860-94332879 Msa0389490:CDS 40.0%
! AAGTTACAAAGGAAGAGCAC+AGG + chr3_1:94333058-94333077 Msa0389490:CDS 40.0%
CACAGGTAGTTTGGATGATA+TGG + chr3_1:94333075-94333094 Msa0389490:CDS 40.0%
GATCTTGGAAATAGATGGGA+AGG + chr3_1:94333097-94333116 Msa0389490:CDS 40.0%
ATCGAAGACAGGATTTCATG+AGG + chr3_1:94333132-94333151 Msa0389490:CDS 40.0%
TCGAAGACAGGATTTCATGA+GGG + chr3_1:94333133-94333152 Msa0389490:CDS 40.0%
ATAGGAGGTTCTTCTATGAC+AGG - chr3_1:94333286-94333305 None:intergenic 40.0%
TGTAACACAACAAACGGTGT+TGG + chr3_1:94333325-94333344 Msa0389490:CDS 40.0%
! AAACGGTGTTGGACAAAATG+TGG + chr3_1:94333336-94333355 Msa0389490:CDS 40.0%
ATCCTCTCCATGAGAAATCT+CGG - chr3_1:94333365-94333384 None:intergenic 40.0%
! GAAAGAACTTGAAGTGTCAC+TGG + chr3_1:94333417-94333436 Msa0389490:CDS 40.0%
! TTCTAAGTTTTCCTCAGGCT+CGG - chr3_1:94333579-94333598 None:intergenic 40.0%
GGAATATACTGCTGTAGATG+TGG + chr3_1:94333638-94333657 Msa0389490:CDS 40.0%
TCATCTTCATCATCCTTGGT+GGG - chr3_1:94334096-94334115 None:intergenic 40.0%
ATCATCTTCATCATCCTTGG+TGG - chr3_1:94334097-94334116 None:intergenic 40.0%
GTCATCATCTTCATCATCCT+TGG - chr3_1:94334100-94334119 None:intergenic 40.0%
TTCTCGTGATGAACCGATAT+CGG + chr3_1:94334143-94334162 Msa0389490:CDS 40.0%
GAAGCCGAATCCAAAAAAAG+AGG + chr3_1:94334288-94334307 Msa0389490:CDS 40.0%
!!! GCCACCTCTTTTTTTGGATT+CGG - chr3_1:94334295-94334314 None:intergenic 40.0%
TGTGTGATATCTCATACTCC+TGG + chr3_1:94334315-94334334 Msa0389490:CDS 40.0%
TAGCTACCTGAAGTTATTCC+CGG + chr3_1:94334374-94334393 Msa0389490:CDS 40.0%
!!! GTTTTTGGAGCAAGAACTAG+AGG - chr3_1:94334408-94334427 None:intergenic 40.0%
TGAATCAAGTACACCGGTAT+AGG - chr3_1:94334474-94334493 None:intergenic 40.0%
ATACCGGTGTACTTGATTCA+TGG + chr3_1:94334474-94334493 Msa0389490:CDS 40.0%
TTCATGGTCGTAGAACCTAT+AGG + chr3_1:94334490-94334509 Msa0389490:CDS 40.0%
TCATGGTCGTAGAACCTATA+GGG + chr3_1:94334491-94334510 Msa0389490:CDS 40.0%
ATTCTGCTTGAACACCCTAT+AGG - chr3_1:94334508-94334527 None:intergenic 40.0%
AATACAGTTGCTACTCTTCC+TGG + chr3_1:94334525-94334544 Msa0389490:CDS 40.0%
! CGATGATGTCAAGCATGTTT+TGG + chr3_1:94334563-94334582 Msa0389490:CDS 40.0%
GCCTTGAGAAGATCCAAAAA+TGG + chr3_1:94334589-94334608 Msa0389490:CDS 40.0%
!!! GCCATTTTTGGATCTTCTCA+AGG - chr3_1:94334593-94334612 None:intergenic 40.0%
!!! TCGGATGTGAATGCCATTTT+TGG - chr3_1:94334605-94334624 None:intergenic 40.0%
ACATCCGAGTGTTCTAATCA+TGG + chr3_1:94334617-94334636 Msa0389490:CDS 40.0%
CATCCGAGTGTTCTAATCAT+GGG + chr3_1:94334618-94334637 Msa0389490:CDS 40.0%
TAGCCCATGATTAGAACACT+CGG - chr3_1:94334624-94334643 None:intergenic 40.0%
GTTTGCACACCGAAAGTTTA+TGG + chr3_1:94334680-94334699 Msa0389490:CDS 40.0%
! AGTTTATGGCTCAAGTGTTG+AGG + chr3_1:94334694-94334713 Msa0389490:CDS 40.0%
!! GTTTATGGCTCAAGTGTTGA+GGG + chr3_1:94334695-94334714 Msa0389490:CDS 40.0%
!! ACCCTAGAAGTACCAAATCA+AGG + chr3_1:94334754-94334773 Msa0389490:CDS 40.0%
AACACTTCGTGAGGGAATTT+CGG - chr3_1:94334888-94334907 None:intergenic 40.0%
ATGCTTTCAACACTTCGTGA+GGG - chr3_1:94334896-94334915 None:intergenic 40.0%
AATGCTTTCAACACTTCGTG+AGG - chr3_1:94334897-94334916 None:intergenic 40.0%
AAGAGGAAAAGGAAAGGAGT+AGG + chr3_1:94334930-94334949 Msa0389490:CDS 40.0%
CGCAATATTTGATCGAGTCA+CGG + chr3_1:94334973-94334992 Msa0389490:CDS 40.0%
GCAATATTTGATCGAGTCAC+GGG + chr3_1:94334974-94334993 Msa0389490:CDS 40.0%
GTTGGAGAGGAAAGAATTCA+AGG + chr3_1:94335044-94335063 Msa0389490:CDS 40.0%
! TATGAAGCAGGAAGTTCTGA+TGG + chr3_1:94335110-94335129 Msa0389490:CDS 40.0%
! TCAAAAGCTCTAACTCGAGA+GGG - chr3_1:94335238-94335257 None:intergenic 40.0%
! ATCAAAAGCTCTAACTCGAG+AGG - chr3_1:94335239-94335258 None:intergenic 40.0%
CACTTGGATCAATACATCCT+TGG + chr3_1:94335261-94335280 Msa0389490:CDS 40.0%
! CCGTGTTGTTAAGAACGAAA+AGG + chr3_1:94335406-94335425 Msa0389490:CDS 40.0%
ATGGATAAATTTGAGGAGCC+TGG + chr3_1:94335563-94335582 Msa0389490:CDS 40.0%
AGTATCTTTGATACTCCACC+AGG - chr3_1:94335584-94335603 None:intergenic 40.0%
!!! TAGCTTGCTTCGTTTTCGAA+GGG - chr3_1:94335688-94335707 None:intergenic 40.0%
!!! ATAGCTTGCTTCGTTTTCGA+AGG - chr3_1:94335689-94335708 None:intergenic 40.0%
! TAAACCATTTTCTGCTGACC+AGG - chr3_1:94335728-94335747 None:intergenic 40.0%
!! ATAAGTACCGAAGAACCACT+TGG + chr3_1:94335786-94335805 Msa0389490:CDS 40.0%
ACTCTTTCCAAGTGGTTCTT+CGG - chr3_1:94335796-94335815 None:intergenic 40.0%
AAGAACCACTTGGAAAGAGT+GGG + chr3_1:94335796-94335815 Msa0389490:CDS 40.0%
ATATTCGCGGTTAATAGGGG+AGG - chr3_1:94329277-94329296 None:intergenic 45.0%
! GTAGTGGTGGTGAATATTCG+CGG - chr3_1:94329290-94329309 None:intergenic 45.0%
ATGCAACTGCACGAACTTCA+AGG + chr3_1:94329328-94329347 Msa0389490:five_prime_UTR 45.0%
GGTGAATTAGGTCCCAATGA+CGG + chr3_1:94330106-94330125 Msa0389490:intron 45.0%
GTCCCAATGACGGCAAAAAA+CGG + chr3_1:94330116-94330135 Msa0389490:intron 45.0%
GTATAAATACTCCCAGCTCC+AGG - chr3_1:94330590-94330609 None:intergenic 45.0%
! ACTTTTGCCTACTTCTTCGG+CGG - chr3_1:94330680-94330699 None:intergenic 45.0%
!!! GCCACTTTTGCCTACTTCTT+CGG - chr3_1:94330683-94330702 None:intergenic 45.0%
AGCAACTTCAGCAGCTGATT+TGG - chr3_1:94330863-94330882 None:intergenic 45.0%
GAAACAGGAGCAATCTGACA+CGG - chr3_1:94331641-94331660 None:intergenic 45.0%
GATTCCAGGACGTAAGAAAC+AGG - chr3_1:94331656-94331675 None:intergenic 45.0%
!! TGAATCATTGGCTCGTTGAG+GGG - chr3_1:94331698-94331717 None:intergenic 45.0%
!! CTGAATCATTGGCTCGTTGA+GGG - chr3_1:94331699-94331718 None:intergenic 45.0%
!! ACTGAATCATTGGCTCGTTG+AGG - chr3_1:94331700-94331719 None:intergenic 45.0%
CAACGAGCCAATGATTCAGT+TGG + chr3_1:94331700-94331719 Msa0389490:CDS 45.0%
TCTATACAGAGAAAGCCCCA+TGG + chr3_1:94331969-94331988 Msa0389490:CDS 45.0%
CATGTGAAAATCAGCCCCAT+CGG + chr3_1:94332132-94332151 Msa0389490:CDS 45.0%
ATCGGATTCAAAACCGACGA+TGG + chr3_1:94332365-94332384 Msa0389490:CDS 45.0%
TGGCTGCGAAGTTAAAGAGT+TGG + chr3_1:94332541-94332560 Msa0389490:CDS 45.0%
! GACAGGTGGCATGTTTCTAA+AGG - chr3_1:94332576-94332595 None:intergenic 45.0%
TTAGAAACATGCCACCTGTC+AGG + chr3_1:94332576-94332595 Msa0389490:CDS 45.0%
! GATGTTTCTATCCTGACAGG+TGG - chr3_1:94332590-94332609 None:intergenic 45.0%
!! CATTTGATGGCACCCTTTTC+CGG - chr3_1:94332677-94332696 None:intergenic 45.0%
AGCTTCTGGTGTACAATAGG+AGG + chr3_1:94332729-94332748 Msa0389490:CDS 45.0%
GCTTCTGGTGTACAATAGGA+GGG + chr3_1:94332730-94332749 Msa0389490:CDS 45.0%
TAGGAGGGCTAAAACCCAAA+AGG + chr3_1:94332745-94332764 Msa0389490:CDS 45.0%
AGGAGGGCTAAAACCCAAAA+GGG + chr3_1:94332746-94332765 Msa0389490:CDS 45.0%
! CACAAGTCTTCTTCCCCTTT+TGG - chr3_1:94332763-94332782 None:intergenic 45.0%
CAAAAGGGGAAGAAGACTTG+TGG + chr3_1:94332761-94332780 Msa0389490:CDS 45.0%
!! TTGTGGCGGTGTTGATCAAA+AGG + chr3_1:94332778-94332797 Msa0389490:CDS 45.0%
TCAGCATCTTGATCAGGAAG+AGG - chr3_1:94332830-94332849 None:intergenic 45.0%
TCGTAATGCTCAACGGCTAT+TGG - chr3_1:94332854-94332873 None:intergenic 45.0%
!! TCAGCATCATCTGCTTTTGC+AGG - chr3_1:94332992-94333011 None:intergenic 45.0%
! AAGGAAGAGCACAGGTAGTT+TGG + chr3_1:94333066-94333085 Msa0389490:CDS 45.0%
TTCTTCCACTGGTCAGTGAT+AGG - chr3_1:94333304-94333323 None:intergenic 45.0%
GTGGAAACCGAGATTTCTCA+TGG + chr3_1:94333355-94333374 Msa0389490:CDS 45.0%
AACCGAGATTTCTCATGGAG+AGG + chr3_1:94333360-94333379 Msa0389490:CDS 45.0%
ACATTGCATCTAGATGGACG+AGG + chr3_1:94333800-94333819 Msa0389490:intron 45.0%
! GGCAGGTTGAAAATTCAGTG+TGG + chr3_1:94334028-94334047 Msa0389490:intron 45.0%
AGATAAAGAAGAGCCCACCA+AGG + chr3_1:94334080-94334099 Msa0389490:CDS 45.0%
!! AAGTGTCGGTCGGGAAAAAA+TGG - chr3_1:94334125-94334144 None:intergenic 45.0%
! CGGAAGAAAACCAAAGCGTT+TGG + chr3_1:94334163-94334182 Msa0389490:CDS 45.0%
TTTCTTTGGCGAAACGTTGC+AGG + chr3_1:94334243-94334262 Msa0389490:CDS 45.0%
TTCTTTGGCGAAACGTTGCA+GGG + chr3_1:94334244-94334263 Msa0389490:CDS 45.0%
TTGCAGGGTCTACAAATCCA+GGG + chr3_1:94334259-94334278 Msa0389490:CDS 45.0%
GCCGAATCCAAAAAAAGAGG+TGG + chr3_1:94334291-94334310 Msa0389490:CDS 45.0%
!!! CACACAGCCACCTCTTTTTT+TGG - chr3_1:94334301-94334320 None:intergenic 45.0%
ATATCTCATACTCCTGGAGC+CGG + chr3_1:94334321-94334340 Msa0389490:CDS 45.0%
! AGAAAAGTTTTTCCGGCTCC+AGG - chr3_1:94334336-94334355 None:intergenic 45.0%
AGCTACCTGAAGTTATTCCC+GGG + chr3_1:94334375-94334394 Msa0389490:CDS 45.0%
CAAGTGGGAGATTCCTATAC+CGG + chr3_1:94334458-94334477 Msa0389490:CDS 45.0%
CGACCATGAATCAAGTACAC+CGG - chr3_1:94334480-94334499 None:intergenic 45.0%
TTGACATCATCGGTAGGCTT+GGG - chr3_1:94334555-94334574 None:intergenic 45.0%
ACATGCTTGACATCATCGGT+AGG - chr3_1:94334561-94334580 None:intergenic 45.0%
TCATCAAGTACCAAGAGTCC+AGG - chr3_1:94334726-94334745 None:intergenic 45.0%
GGACTCTTGGTACTTGATGA+AGG + chr3_1:94334726-94334745 Msa0389490:CDS 45.0%
AGGAAAGGAGTAGGCCAAAA+AGG + chr3_1:94334939-94334958 Msa0389490:CDS 45.0%
AGGCCAAAAAGGAGCAGAAA+AGG + chr3_1:94334950-94334969 Msa0389490:CDS 45.0%
! GGAAGTTCTGATGGTTTACC+AGG + chr3_1:94335119-94335138 Msa0389490:CDS 45.0%
AGCGACATGTTTAAGTGCAG+TGG + chr3_1:94335209-94335228 Msa0389490:CDS 45.0%
TGGATCAATACATCCTTGGC+TGG + chr3_1:94335265-94335284 Msa0389490:CDS 45.0%
AACTCGAGCTCTTTGAACGT+GGG + chr3_1:94335534-94335553 Msa0389490:CDS 45.0%
GATAAATTTGAGGAGCCTGG+TGG + chr3_1:94335566-94335585 Msa0389490:CDS 45.0%
TGCATCTCGTGTGATCATGT+TGG + chr3_1:94335649-94335668 Msa0389490:CDS 45.0%
TGATCATGTTGGATTCCGAG+TGG + chr3_1:94335660-94335679 Msa0389490:CDS 45.0%
! GTTTATCAGCTCTTGGTGAC+AGG + chr3_1:94335749-94335768 Msa0389490:CDS 45.0%
GAAGAACCACTTGGAAAGAG+TGG + chr3_1:94335795-94335814 Msa0389490:CDS 45.0%
! GTCGAGCATGATTTTCAGTG+AGG + chr3_1:94335820-94335839 Msa0389490:CDS 45.0%
TCTAAGGGAAATGGTTGAGG+AGG + chr3_1:94335895-94335914 Msa0389490:CDS 45.0%
!!! ATTTTTTTCTTTTTAATTAT+AGG + chr3_1:94331923-94331942 Msa0389490:intron 5.0%
AGAGAGAGAGAGAGTAGTGG+TGG - chr3_1:94329303-94329322 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGTAG+TGG - chr3_1:94329306-94329325 None:intergenic 50.0%
!!! GGCCGTTTTTTGCCGTCATT+GGG - chr3_1:94330121-94330140 None:intergenic 50.0%
!!! AGGCCGTTTTTTGCCGTCAT+TGG - chr3_1:94330122-94330141 None:intergenic 50.0%
GACGGCAAAAAACGGCCTTA+AGG + chr3_1:94330124-94330143 Msa0389490:intron 50.0%
CCACTAAAGCCCTCGCTTTA+GGG + chr3_1:94330487-94330506 Msa0389490:intron 50.0%
GTTGGTACACCCTAAAGCGA+GGG - chr3_1:94330499-94330518 None:intergenic 50.0%
TGTTGGTACACCCTAAAGCG+AGG - chr3_1:94330500-94330519 None:intergenic 50.0%
GAAGATTATTGGGCCGGAAC+AGG + chr3_1:94330562-94330581 Msa0389490:intron 50.0%
GCCGAAGAAGTAGGCAAAAG+TGG + chr3_1:94330679-94330698 Msa0389490:intron 50.0%
! TGCTCCTGTTTCTTACGTCC+TGG + chr3_1:94331649-94331668 Msa0389490:CDS 50.0%
!! GAATCATTGGCTCGTTGAGG+GGG - chr3_1:94331697-94331716 None:intergenic 50.0%
!! TTCCCTGAGAGTGTCGTGTT+TGG + chr3_1:94331781-94331800 Msa0389490:intron 50.0%
CACCAAACACGACACTCTCA+GGG - chr3_1:94331786-94331805 None:intergenic 50.0%
ACACCAAACACGACACTCTC+AGG - chr3_1:94331787-94331806 None:intergenic 50.0%
!! CGATGGGGCTGATTTTCACA+TGG - chr3_1:94332134-94332153 None:intergenic 50.0%
CGGTACTAACATGCCATCGT+CGG - chr3_1:94332381-94332400 None:intergenic 50.0%
ACGTGCATGATCAGCTCTCT+TGG - chr3_1:94332432-94332451 None:intergenic 50.0%
! GGGTGCCATCAAATGTCAGA+AGG + chr3_1:94332682-94332701 Msa0389490:CDS 50.0%
!! GCTGGCCTTCTGACATTTGA+TGG - chr3_1:94332690-94332709 None:intergenic 50.0%
CCAGCAAACCGAATGCTTGT+CGG + chr3_1:94332705-94332724 Msa0389490:CDS 50.0%
CAGCAAACCGAATGCTTGTC+GGG + chr3_1:94332706-94332725 Msa0389490:CDS 50.0%
AGAAGCTCCCGACAAGCATT+CGG - chr3_1:94332716-94332735 None:intergenic 50.0%
GGGAGCTTCTGGTGTACAAT+AGG + chr3_1:94332726-94332745 Msa0389490:CDS 50.0%
GGAGGGCTAAAACCCAAAAG+GGG + chr3_1:94332747-94332766 Msa0389490:CDS 50.0%
AAGGGGAAGAAGACTTGTGG+CGG + chr3_1:94332764-94332783 Msa0389490:CDS 50.0%
CTTCTAGCAACGTTGCCGTT+TGG - chr3_1:94332878-94332897 None:intergenic 50.0%
AACCTCCTATCACTGACCAG+TGG + chr3_1:94333296-94333315 Msa0389490:CDS 50.0%
TTCCACTGGTCAGTGATAGG+AGG - chr3_1:94333301-94333320 None:intergenic 50.0%
!!! AATTGTTTTGGCCGAGCCTG+AGG + chr3_1:94333565-94333584 Msa0389490:CDS 50.0%
AAATTCAGTGTGGCGCCAAG+AGG + chr3_1:94334038-94334057 Msa0389490:CDS 50.0%
CATCACACTGCTTCTCCTCT+TGG - chr3_1:94334056-94334075 None:intergenic 50.0%
CAAGAGGAGAAGCAGTGTGA+TGG + chr3_1:94334054-94334073 Msa0389490:CDS 50.0%
!! TCATCACGAGAAGTGTCGGT+CGG - chr3_1:94334135-94334154 None:intergenic 50.0%
! CGGTTCATCACGAGAAGTGT+CGG - chr3_1:94334139-94334158 None:intergenic 50.0%
GTTGCAGGGTCTACAAATCC+AGG + chr3_1:94334258-94334277 Msa0389490:CDS 50.0%
GATTCGGCTTCAATTAGCCC+TGG - chr3_1:94334279-94334298 None:intergenic 50.0%
GCTACCTGAAGTTATTCCCG+GGG + chr3_1:94334376-94334395 Msa0389490:CDS 50.0%
TCTTCCCCGGGAATAACTTC+AGG - chr3_1:94334383-94334402 None:intergenic 50.0%
AGAACTAGAGGTCTCTTCCC+CGG - chr3_1:94334396-94334415 None:intergenic 50.0%
CTTGACATCATCGGTAGGCT+TGG - chr3_1:94334556-94334575 None:intergenic 50.0%
!! CAAGTGTTGAGGGAAAGTCC+TGG + chr3_1:94334705-94334724 Msa0389490:CDS 50.0%
! GCGCCTTTTCTGCTCCTTTT+TGG - chr3_1:94334956-94334975 None:intergenic 50.0%
! TCCTTGGCTGGTCAAAACTG+CGG + chr3_1:94335277-94335296 Msa0389490:CDS 50.0%
TTCAAAGAGCTCGAGTTCCC+CGG - chr3_1:94335531-94335550 None:intergenic 50.0%
GAACTCGAGCTCTTTGAACG+TGG + chr3_1:94335533-94335552 Msa0389490:CDS 50.0%
TCAATCACAGCTTGTGCCGA+AGG + chr3_1:94335611-94335630 Msa0389490:CDS 50.0%
! CGTTTTCGAAGGGTTCCACT+CGG - chr3_1:94335678-94335697 None:intergenic 50.0%
TCGTCCTGGTCAGCAGAAAA+TGG + chr3_1:94335721-94335740 Msa0389490:CDS 50.0%
! TTTCAGTGAGGCGTTTGTCG+AGG + chr3_1:94335832-94335851 Msa0389490:CDS 50.0%
TTGTCGAGGATCCTTCTCGT+TGG + chr3_1:94335846-94335865 Msa0389490:CDS 50.0%
TTCTCAGCTTGCCAACGAGA+AGG - chr3_1:94335860-94335879 None:intergenic 50.0%
TAAATGATCCGGCCGGTCCA+AGG + chr3_1:94330458-94330477 Msa0389490:intron 55.0%
AAATGATCCGGCCGGTCCAA+GGG + chr3_1:94330459-94330478 Msa0389490:intron 55.0%
! TAGTGGCCTTACCCTTGGAC+CGG - chr3_1:94330473-94330492 None:intergenic 55.0%
! GGCTTTAGTGGCCTTACCCT+TGG - chr3_1:94330478-94330497 None:intergenic 55.0%
GCCACTAAAGCCCTCGCTTT+AGG + chr3_1:94330486-94330505 Msa0389490:intron 55.0%
! CCCTAAAGCGAGGGCTTTAG+TGG - chr3_1:94330490-94330509 None:intergenic 55.0%
! CTTTGGCTCATGGCATCCTG+TGG + chr3_1:94331504-94331523 Msa0389490:CDS 55.0%
!! AGCACGCATACGTCGATTCC+AGG - chr3_1:94331670-94331689 None:intergenic 55.0%
ACACGAGCACTCTGAGCCAT+GGG - chr3_1:94331988-94332007 None:intergenic 55.0%
GTGAAAATCAGCCCCATCGG+TGG + chr3_1:94332135-94332154 Msa0389490:CDS 55.0%
TCGGATGAAGACCACCGATG+GGG - chr3_1:94332149-94332168 None:intergenic 55.0%
CTCGGATGAAGACCACCGAT+GGG - chr3_1:94332150-94332169 None:intergenic 55.0%
GCTTACGACGTTCCAAACGC+AGG + chr3_1:94332495-94332514 Msa0389490:CDS 55.0%
TGGCTGTACATGCCTGCGTT+TGG - chr3_1:94332510-94332529 None:intergenic 55.0%
! GTACAGCCAGAGCGTTACGT+TGG + chr3_1:94332521-94332540 Msa0389490:CDS 55.0%
! CCGACAAGCATTCGGTTTGC+TGG - chr3_1:94332708-94332727 None:intergenic 55.0%
GAATGCTTGTCGGGAGCTTC+TGG + chr3_1:94332715-94332734 Msa0389490:CDS 55.0%
!! CATCACGAGAAGTGTCGGTC+GGG - chr3_1:94334134-94334153 None:intergenic 55.0%
GAACTAGAGGTCTCTTCCCC+GGG - chr3_1:94334395-94334414 None:intergenic 55.0%
GAGGGAAAGTCCTGGACTCT+TGG + chr3_1:94334713-94334732 Msa0389490:CDS 55.0%
!! ACCGCAGTTTTGACCAGCCA+AGG - chr3_1:94335281-94335300 None:intergenic 55.0%
AGCGAACAGGCGCAATGTTG+TGG - chr3_1:94335445-94335464 None:intergenic 55.0%
ATTGCACGTGCGTTTCGTCC+TGG + chr3_1:94335707-94335726 Msa0389490:CDS 55.0%
! GCTCTTGGTGACAGGTTCGT+TGG + chr3_1:94335757-94335776 Msa0389490:CDS 55.0%
! CTTGGTGACAGGTTCGTTGG+AGG + chr3_1:94335760-94335779 Msa0389490:CDS 55.0%
CGACACCCACTCTTTCCAAG+TGG - chr3_1:94335804-94335823 None:intergenic 55.0%
TGCACTGCCGCCGAAGAAGT+AGG + chr3_1:94330670-94330689 Msa0389490:intron 60.0%
CACGAGCACTCTGAGCCATG+GGG - chr3_1:94331987-94332006 None:intergenic 60.0%
GACACGAGCACTCTGAGCCA+TGG - chr3_1:94331989-94332008 None:intergenic 60.0%
CCTCGGATGAAGACCACCGA+TGG - chr3_1:94332151-94332170 None:intergenic 60.0%
CCATCGGTGGTCTTCATCCG+AGG + chr3_1:94332148-94332167 Msa0389490:CDS 60.0%
TCGCAGCCAACGTAACGCTC+TGG - chr3_1:94332530-94332549 None:intergenic 60.0%
! CCCTTTTCCGGACTGCTCTG+CGG - chr3_1:94332665-94332684 None:intergenic 60.0%
CCGCAGAGCAGTCCGGAAAA+GGG + chr3_1:94332662-94332681 Msa0389490:CDS 60.0%
CGCACGCGTGCACTCTTATG+TGG + chr3_1:94333734-94333753 Msa0389490:intron 60.0%
TCGGTAGGCTTGGGAACTCC+AGG - chr3_1:94334546-94334565 None:intergenic 60.0%
ATCCGGCCGGTCCAAGGGTA+AGG + chr3_1:94330464-94330483 Msa0389490:intron 65.0%
ATTGGGCCGGAACAGGTCCC+TGG + chr3_1:94330569-94330588 Msa0389490:intron 65.0%
CCAGCTCCAGGGACCTGTTC+CGG - chr3_1:94330578-94330597 None:intergenic 65.0%
CGGAACAGGTCCCTGGAGCT+GGG + chr3_1:94330576-94330595 Msa0389490:intron 65.0%
CCGGACTGCTCTGCGGCAAA+CGG - chr3_1:94332658-94332677 None:intergenic 65.0%
CCGTTTGCCGCAGAGCAGTC+CGG + chr3_1:94332655-94332674 Msa0389490:CDS 65.0%
GCCGCAGAGCAGTCCGGAAA+AGG + chr3_1:94332661-94332680 Msa0389490:CDS 65.0%
GGCCTTACCCTTGGACCGGC+CGG - chr3_1:94330469-94330488 None:intergenic 70.0%
CCGGAACAGGTCCCTGGAGC+TGG + chr3_1:94330575-94330594 Msa0389490:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 94329241 94335976 94329241 ID=Msa0389490;Name=Msa0389490
chr3_1 mRNA 94329241 94335976 94329241 ID=Msa0389490-mRNA-1;Parent=Msa0389490;Name=Msa0389490-mRNA-1;_AED=0.03;_eAED=0.03;_QI=375|1|0.83|1|0.8|0.66|6|0|1305
chr3_1 exon 94329241 94329574 94329241 ID=Msa0389490-mRNA-1:exon:26749;Parent=Msa0389490-mRNA-1
chr3_1 exon 94330869 94330964 94330869 ID=Msa0389490-mRNA-1:exon:26750;Parent=Msa0389490-mRNA-1
chr3_1 exon 94331488 94331738 94331488 ID=Msa0389490-mRNA-1:exon:26751;Parent=Msa0389490-mRNA-1
chr3_1 exon 94331945 94333465 94331945 ID=Msa0389490-mRNA-1:exon:26752;Parent=Msa0389490-mRNA-1
chr3_1 exon 94333554 94333700 94333554 ID=Msa0389490-mRNA-1:exon:26753;Parent=Msa0389490-mRNA-1
chr3_1 exon 94334033 94335976 94334033 ID=Msa0389490-mRNA-1:exon:26754;Parent=Msa0389490-mRNA-1
chr3_1 five_prime_UTR 94329241 94329574 94329241 ID=Msa0389490-mRNA-1:five_prime_utr;Parent=Msa0389490-mRNA-1
chr3_1 five_prime_UTR 94330869 94330909 94330869 ID=Msa0389490-mRNA-1:five_prime_utr;Parent=Msa0389490-mRNA-1
chr3_1 CDS 94330910 94330964 94330910 ID=Msa0389490-mRNA-1:cds;Parent=Msa0389490-mRNA-1
chr3_1 CDS 94331488 94331738 94331488 ID=Msa0389490-mRNA-1:cds;Parent=Msa0389490-mRNA-1
chr3_1 CDS 94331945 94333465 94331945 ID=Msa0389490-mRNA-1:cds;Parent=Msa0389490-mRNA-1
chr3_1 CDS 94333554 94333700 94333554 ID=Msa0389490-mRNA-1:cds;Parent=Msa0389490-mRNA-1
chr3_1 CDS 94334033 94335976 94334033 ID=Msa0389490-mRNA-1:cds;Parent=Msa0389490-mRNA-1
Gene Sequence

>Msa0389490

ATGATGAACAGAAAGAGGCGTCTAAATGAATCAAAGAATTCATTCAATTCTGACCCATTTGAAGCAGTTATCTTTGGCTCATGGCATCCTGTGGAGTTCATAAAAGTTAAATCAGGATCTATGAGCATACATTTCACAGATAATCACCATATGGTTATGGACAAAGGTGCTTTATCAGACATTCGTTTAAGGTCAAGGAAAGCTACCGTGTCAGATTGCTCCTGTTTCTTACGTCCTGGAATCGACGTATGCGTGCTATCACCCCCTCAACGAGCCAATGATTCAGTTGGTTTAAATCTCGAGCCTGTTTGGGCTGATGCTAGAATAAGTTCTATACAGAGAAAGCCCCATGGCTCAGAGTGCTCGTGTCAGTTTTTCGTCAACTTCTATATTGAACAAGGTTCACTTGGTTTAGAAATGAGAACTCTTTGTAAGGATGTCAAAGTATTCGGACTCAATCAGATCTCCATCCTCCAAAAAATCGAACACAGTCCATGTGAAAATCAGCCCCATCGGTGGTCTTCATCCGAGGATTGCTCTTCATTACCAAACACCAAATTGCTTTTGGGAAAGTTCTTAATCGATCTTTCATGGTTAGTTGTTACATCGGTTGTCAAGAATGTTTCGTTCTGTGCAAGATCAGTAGAAAACAAGATGGTGTATCAAATTTTGGGAGGTGATAGTAGTAATAGCTCATCGTCGAACACCGAGTCTCATATTGATGTCATCGGATTCAAAACCGACGATGGCATGTTAGTACCGATTGTTTCTCAAGTTGCTATAACTAACACCAAGAGAGCTGATCATGCACGTGAATCGCGTGCAGATGAAGCGTCATCATCTTATAATGTTGACGGCTTACGACGTTCCAAACGCAGGCATGTACAGCCAGAGCGTTACGTTGGCTGCGAAGTTAAAGAGTTGGATGTTGGTACCTTTAGAAACATGCCACCTGTCAGGATAGAAACATCCAAAGCAGTAGTAGATGAAATGTCGTTGCCGTTATCATTCTTGTTCCGTTTGCCGCAGAGCAGTCCGGAAAAGGGTGCCATCAAATGTCAGAAGGCCAGCAAACCGAATGCTTGTCGGGAGCTTCTGGTGTACAATAGGAGGGCTAAAACCCAAAAGGGGAAGAAGACTTGTGGCGGTGTTGATCAAAAGGAACATAAAAATCCACTTGCTATTATTCCTCTTCCTGATCAAGATGCTGATCCAATAGCCGTTGAGCATTACGATCCAAACGGCAACGTTGCTAGAAGTCATGAACATCAATCACGTGATATTACTTCGCAGTATAGTCATTTGGTTAATAATCCTAAACCAAGGAAAAACATCAATTTGTTAGATGATCCTGCAAAAGCAGATGATGCTGAGAAGAACGACCATGTTTCTTCACGATGTCAATTTTTTGGCTCTACTAAGTTACAAAGGAAGAGCACAGGTAGTTTGGATGATATGGATCTTGGAAATAGATGGGAAGGAATAAAAAGAAAATCGAAGACAGGATTTCATGAGGGAACATATCGCTCAACTCATTTAAGAAATAACGGCGAAGGAAGAAGTCACAATTATAAAGACAGAACTTTAAATGCGGCCGCATACAAGAGTTTGATCCATTCGTATTTACAGAATATTAATACAATACCTGTCATAGAAGAACCTCCTATCACTGACCAGTGGAAGAAATGTAACACAACAAACGGTGTTGGACAAAATGTGGAAACCGAGATTTCTCATGGAGAGGATGATGTAGAAAAAGCTGAAATGGATATGTTGTGGAAAGAACTTGAAGTGTCACTGGCGTCGAGTTATTTTGATGACTCAGAGGTTTCAAATGCAATTGTTTTGGCCGAGCCTGAGGAAAACTTAGAAGAAGTTTGTGAACATGATAATAGATTGGATGAAGAAATTGGAATATACTGCTGTAGATGTGGCTTTGTGACCACCCATATCAGAGATGTTAATCCAATTTTTGTTGAAAATTCAGTGTGGCGCCAAGAGGAGAAGCAGTGTGATGGAGAAGATAAAGAAGAGCCCACCAAGGATGATGAAGATGATGACTTCCATTTTTTCCCGACCGACACTTCTCGTGATGAACCGATATCGGAAGAAAACCAAAGCGTTTGGTCATTAATTCCTGAACTCAGAGAAAAATTGCATGTGCACCAAAAGAAAGCTTTTGAGTTTCTTTGGCGAAACGTTGCAGGGTCTACAAATCCAGGGCTAATTGAAGCCGAATCCAAAAAAAGAGGTGGCTGTGTGATATCTCATACTCCTGGAGCCGGAAAAACTTTTCTCATCATCGCTTTTCTTGTTAGCTACCTGAAGTTATTCCCGGGGAAGAGACCTCTAGTTCTTGCTCCAAAAACTACGCTCTATACTTGGTATAAAGAATTTATCAAGTGGGAGATTCCTATACCGGTGTACTTGATTCATGGTCGTAGAACCTATAGGGTGTTCAAGCAGAATACAGTTGCTACTCTTCCTGGAGTTCCCAAGCCTACCGATGATGTCAAGCATGTTTTGGATTGCCTTGAGAAGATCCAAAAATGGCATTCACATCCGAGTGTTCTAATCATGGGCTACACTTCGTTTTTAACATTGATGCGAGAGGATTCAAAGTTTGCACACCGAAAGTTTATGGCTCAAGTGTTGAGGGAAAGTCCTGGACTCTTGGTACTTGATGAAGGTCACAACCCTAGAAGTACCAAATCAAGGTTGCGAAAATGTTTGATGAAAGTGCAAACCGAATTGAGAATATTGCTTTCCGGTACTTTGTTTCAAAATAATTTCTGCGAATACTTCAACACTCTATGCTTGGCAAGACCGAAATTCCCTCACGAAGTGTTGAAAGCATTAGACCCTAAATACAAGAGGAAAAGGAAAGGAGTAGGCCAAAAAGGAGCAGAAAAGGCGCAATATTTGATCGAGTCACGGGCAAGAAAATTCTTCTTAGATACAATCGCTAGGAAAATTGACTCTAATGTTGGAGAGGAAAGAATTCAAGGATTAAACATGTTGAGAAATGTGACAAATGGTTTTATCGATGTTTATGAAGCAGGAAGTTCTGATGGTTTACCAGGTTTACAAATTTATACACTGCTAATGAATACAACCGATATACAGCATGAGATTCTGCAGAAACTTCACAGCGACATGTTTAAGTGCAGTGGATACCCTCTCGAGTTAGAGCTTTTGATAACACTTGGATCAATACATCCTTGGCTGGTCAAAACTGCGGTGTGTTCTCAGAAATTTTTAACAAAGGAGCAATTGAGTGATCTTGATAAGTACAAGTTTGATTTGAAAATAGGTTCAAAAGTAAGATTTGTTTTGAGCCTTATCTACCGTGTTGTTAAGAACGAAAAGGTTCTTATCTTTTGCCACAACATTGCGCCTGTTCGCTTATTTCAAGAATATTTCGAGAAGTACTTTGGATGGCAAAAAGGCCGTGAAGTTTTAGTACTAACCGGGGAACTCGAGCTCTTTGAACGTGGGAAAATAATGGATAAATTTGAGGAGCCTGGTGGAGTATCAAAGATACTACTTGCTTCAATCACAGCTTGTGCCGAAGGAATTAGTTTGACAGCTGCATCTCGTGTGATCATGTTGGATTCCGAGTGGAACCCTTCGAAAACGAAGCAAGCTATTGCACGTGCGTTTCGTCCTGGTCAGCAGAAAATGGTTTATGTTTATCAGCTCTTGGTGACAGGTTCGTTGGAGGAAGATAAGTACCGAAGAACCACTTGGAAAGAGTGGGTGTCGAGCATGATTTTCAGTGAGGCGTTTGTCGAGGATCCTTCTCGTTGGCAAGCTGAGAAGATTGAAGATGATATTCTAAGGGAAATGGTTGAGGAGGATAAGTCTAAATCATTCCATATGATCATGAAGAATGAAAAGGCTTCAACAAAAACATAA
Protein sequence

>Msa0389490

MMNRKRRLNESKNSFNSDPFEAVIFGSWHPVEFIKVKSGSMSIHFTDNHHMVMDKGALSDIRLRSRKATVSDCSCFLRPGIDVCVLSPPQRANDSVGLNLEPVWADARISSIQRKPHGSECSCQFFVNFYIEQGSLGLEMRTLCKDVKVFGLNQISILQKIEHSPCENQPHRWSSSEDCSSLPNTKLLLGKFLIDLSWLVVTSVVKNVSFCARSVENKMVYQILGGDSSNSSSSNTESHIDVIGFKTDDGMLVPIVSQVAITNTKRADHARESRADEASSSYNVDGLRRSKRRHVQPERYVGCEVKELDVGTFRNMPPVRIETSKAVVDEMSLPLSFLFRLPQSSPEKGAIKCQKASKPNACRELLVYNRRAKTQKGKKTCGGVDQKEHKNPLAIIPLPDQDADPIAVEHYDPNGNVARSHEHQSRDITSQYSHLVNNPKPRKNINLLDDPAKADDAEKNDHVSSRCQFFGSTKLQRKSTGSLDDMDLGNRWEGIKRKSKTGFHEGTYRSTHLRNNGEGRSHNYKDRTLNAAAYKSLIHSYLQNINTIPVIEEPPITDQWKKCNTTNGVGQNVETEISHGEDDVEKAEMDMLWKELEVSLASSYFDDSEVSNAIVLAEPEENLEEVCEHDNRLDEEIGIYCCRCGFVTTHIRDVNPIFVENSVWRQEEKQCDGEDKEEPTKDDEDDDFHFFPTDTSRDEPISEENQSVWSLIPELREKLHVHQKKAFEFLWRNVAGSTNPGLIEAESKKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRVFKQNTVATLPGVPKPTDDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKFMAQVLRESPGLLVLDEGHNPRSTKSRLRKCLMKVQTELRILLSGTLFQNNFCEYFNTLCLARPKFPHEVLKALDPKYKRKRKGVGQKGAEKAQYLIESRARKFFLDTIARKIDSNVGEERIQGLNMLRNVTNGFIDVYEAGSSDGLPGLQIYTLLMNTTDIQHEILQKLHSDMFKCSGYPLELELLITLGSIHPWLVKTAVCSQKFLTKEQLSDLDKYKFDLKIGSKVRFVLSLIYRVVKNEKVLIFCHNIAPVRLFQEYFEKYFGWQKGREVLVLTGELELFERGKIMDKFEEPGGVSKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTGSLEEDKYRRTTWKEWVSSMIFSEAFVEDPSRWQAEKIEDDILREMVEEDKSKSFHMIMKNEKASTKT*