AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0818700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0818700 MtrunA17_Chr5g0437621 97.165 1305 36 1 2 1305 1 1305 0.0 2637
Msa0818700 MtrunA17_Chr3g0114161 55.749 1322 466 25 11 1303 16 1247 0.0 1362
Msa0818700 MtrunA17_Chr7g0224051 62.743 875 292 15 440 1304 267 1117 0.0 1073
Msa0818700 MtrunA17_Chr7g0224051 46.545 275 120 6 59 321 12 271 3.90e-63 235
Msa0818700 MtrunA17_Chr1g0191141 58.653 861 321 16 449 1303 271 1102 0.0 962
Msa0818700 MtrunA17_Chr1g0191141 47.012 251 111 6 20 258 8 248 5.92e-56 213
Msa0818700 MtrunA17_Chr7g0233031 34.450 746 398 20 585 1292 542 1234 1.46e-109 375
Msa0818700 MtrunA17_Chr7g0233021 35.745 691 367 19 627 1284 567 1213 8.59e-109 372
Msa0818700 MtrunA17_Chr7g0225791 32.645 726 424 17 584 1284 583 1268 2.15e-105 363
Msa0818700 MtrunA17_Chr4g0047081 32.895 684 406 14 627 1292 578 1226 4.07e-102 353
Msa0818700 MtrunA17_Chr7g0232971 32.349 745 434 20 585 1300 591 1294 8.95e-99 345
Msa0818700 MtrunA17_Chr7g0232991 31.669 641 373 14 686 1292 39 648 2.34e-88 301
Msa0818700 MtrunA17_Chr7g0224031 61.187 219 78 4 864 1080 25 238 7.01e-82 268
Msa0818700 MtrunA17_Chr2g0296421 30.243 701 399 22 571 1259 379 1001 4.39e-81 289
Msa0818700 MtrunA17_Chr8g0352361 30.715 713 386 23 568 1259 227 852 1.20e-79 282
Msa0818700 MtrunA17_Chr7g0233001 32.022 534 327 10 768 1290 1 509 5.28e-75 259
Msa0818700 MtrunA17_Chr7g0224021 65.094 106 35 1 698 803 10 113 2.16e-41 148
Msa0818700 MtrunA17_Chr2g0320781 34.211 228 145 2 1026 1252 17 240 5.86e-35 134
Msa0818700 MtrunA17_Chr8g0384531 24.570 582 331 19 706 1251 371 880 2.68e-32 137
Msa0818700 MtrunA17_Chr5g0393461 22.417 629 376 23 698 1289 163 716 3.95e-25 113
Msa0818700 MtrunA17_Chr1g0190391 29.762 252 143 10 701 945 564 788 3.11e-24 110
Msa0818700 MtrunA17_Chr4g0052341 24.772 549 317 22 749 1278 762 1233 6.06e-23 107
Msa0818700 MtrunA17_Chr1g0183681 23.164 531 333 19 749 1259 408 883 2.04e-20 98.6
Msa0818700 MtrunA17_Chr1g0190381 38.621 145 81 2 1122 1258 205 349 2.44e-20 96.7
Msa0818700 MtrunA17_Chr1g0205891 24.630 540 316 17 754 1285 398 854 1.01e-18 92.8
Msa0818700 MtrunA17_Chr5g0394201 24.444 540 318 17 754 1286 385 841 1.61e-18 92.0
Msa0818700 MtrunA17_Chr5g0403921 32.418 182 111 3 1107 1287 507 677 3.73e-15 80.9
Msa0818700 MtrunA17_Chr4g0017211 23.604 394 265 9 893 1260 1581 1964 5.11e-14 77.8
Msa0818700 MtrunA17_Chr4g0040301 32.374 139 88 2 1122 1260 397 529 1.21e-13 75.9
Msa0818700 MtrunA17_Chr3g0114111 86.111 36 5 0 1257 1292 1 36 2.04e-13 66.6
Msa0818700 MtrunA17_Chr5g0442141 33.846 130 79 2 1123 1251 951 1074 1.02e-12 73.6
Msa0818700 MtrunA17_Chr3g0095091 33.077 130 80 2 1123 1251 905 1028 1.16e-12 73.2
Msa0818700 MtrunA17_Chr4g0066651 27.461 193 128 3 1081 1266 1277 1464 4.56e-12 71.2
Msa0818700 MtrunA17_Chr2g0320751 40.230 87 51 1 1156 1242 896 981 8.62e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0818700 AT5G20420.1 53.118 1331 521 24 4 1303 2 1260 0.0 1279
Msa0818700 AT3G42670.2 65.990 788 250 8 524 1303 477 1254 0.0 1038
Msa0818700 AT3G42670.2 42.006 319 169 6 2 320 1 303 3.27e-62 233
Msa0818700 AT3G42670.3 65.990 788 250 8 524 1303 477 1254 0.0 1038
Msa0818700 AT3G42670.3 42.006 319 169 6 2 320 1 303 3.27e-62 233
Msa0818700 AT3G42670.1 65.990 788 250 8 524 1303 477 1254 0.0 1038
Msa0818700 AT3G42670.1 42.006 319 169 6 2 320 1 303 3.27e-62 233
Msa0818700 AT3G42670.4 65.693 787 256 6 524 1303 477 1256 0.0 1037
Msa0818700 AT3G42670.4 42.006 319 169 6 2 320 1 303 3.59e-62 233
Msa0818700 AT3G24340.1 32.192 730 426 17 585 1302 453 1125 2.85e-98 341
Msa0818700 AT1G05490.1 32.206 739 420 19 587 1288 690 1384 1.40e-97 343
Msa0818700 AT2G16390.2 30.496 705 404 22 568 1259 219 850 1.89e-78 279
Msa0818700 AT2G16390.1 30.496 705 404 22 568 1259 216 847 2.89e-78 278
Msa0818700 AT2G21450.3 30.122 654 375 17 625 1259 92 682 1.57e-74 264
Msa0818700 AT2G21450.1 30.382 655 372 17 625 1259 183 773 3.47e-74 265
Msa0818700 AT2G21450.2 30.122 654 375 17 625 1259 190 780 4.25e-74 265
Msa0818700 AT1G08600.4 27.090 598 340 23 718 1258 718 1276 2.50e-45 180
Msa0818700 AT1G08600.3 27.090 598 340 23 718 1258 718 1276 2.50e-45 180
Msa0818700 AT1G08600.2 27.090 598 340 23 718 1258 718 1276 2.50e-45 180
Msa0818700 AT1G08600.1 24.667 600 331 21 718 1258 718 1255 7.12e-38 155
Msa0818700 AT5G63950.1 24.399 582 325 22 709 1251 367 872 7.92e-27 119
Msa0818700 AT5G63950.2 24.740 578 311 23 709 1251 367 855 1.08e-26 119
Msa0818700 AT3G06010.1 24.908 542 314 21 754 1286 425 882 2.89e-18 91.7
Msa0818700 AT3G19210.1 34.247 146 88 2 1154 1299 579 716 4.15e-16 84.7
Msa0818700 AT3G19210.2 34.247 146 88 2 1154 1299 577 714 4.39e-16 84.3
Msa0818700 AT3G19210.3 34.247 146 88 2 1154 1299 579 716 5.39e-16 84.0
Msa0818700 AT1G03750.1 31.013 158 102 3 1101 1257 523 674 2.13e-14 79.0
Msa0818700 AT5G66750.1 31.818 176 113 3 1121 1295 540 709 8.89e-14 76.6
Msa0818700 AT2G13370.1 29.885 174 112 4 1096 1265 927 1094 5.91e-13 74.7
Msa0818700 AT2G13370.2 29.885 174 112 4 1096 1265 927 1094 5.91e-13 74.7
Msa0818700 AT2G13370.3 29.885 174 112 4 1096 1265 927 1094 5.91e-13 74.7
Msa0818700 AT2G28290.2 26.389 216 148 6 1081 1289 1042 1253 4.37e-12 72.0
Msa0818700 AT2G28290.3 26.389 216 148 6 1081 1289 1042 1253 4.49e-12 72.0
Msa0818700 AT2G28290.4 26.389 216 148 6 1081 1289 1042 1253 4.49e-12 72.0
Msa0818700 AT2G28290.6 26.389 216 148 6 1081 1289 1043 1254 4.49e-12 72.0
Msa0818700 AT2G28290.1 26.389 216 148 6 1081 1289 1042 1253 4.57e-12 72.0
Msa0818700 AT2G28290.5 26.389 216 148 6 1081 1289 1043 1254 4.61e-12 71.6
Msa0818700 AT5G44800.1 27.619 210 133 7 1081 1278 975 1177 7.40e-12 71.2
Msa0818700 AT3G57300.1 30.612 147 92 3 1121 1265 1222 1360 1.43e-11 70.1
Msa0818700 AT3G57300.4 30.612 147 92 3 1121 1265 1222 1360 1.43e-11 70.1
Msa0818700 AT3G57300.2 30.612 147 92 3 1121 1265 1255 1393 1.59e-11 69.7
Msa0818700 AT5G19310.2 33.577 137 84 1 1154 1290 475 604 1.78e-11 69.3
Msa0818700 AT5G19310.1 33.577 137 84 1 1154 1290 739 868 1.81e-11 69.7
Msa0818700 AT2G18760.3 36.458 96 60 1 1164 1259 840 934 5.45e-11 68.2
Msa0818700 AT2G18760.4 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0818700 AT2G18760.1 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0818700 AT2G18760.2 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0818700 AT2G18760.7 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0818700 AT2G18760.5 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8
Msa0818700 AT2G18760.6 45.588 68 37 0 1192 1259 808 875 5.85e-11 67.8

Find 271 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGATGGTGTATCAAATTT+TGG 0.090524 5_3:+54697246 Msa0818700:CDS
CACAAGTCTTCTTCCCCTTT+TGG 0.131162 5_3:-54697717 None:intergenic
AATTACCTTTATCTCTATTT+TGG 0.144716 5_3:+54694511 Msa0818700:five_prime_UTR
GTTTGCACACCGAAAGTTTA+TGG 0.152463 5_3:+54699637 Msa0818700:CDS
CTTTATCAGACATTCGTTTA+AGG 0.216380 5_3:+54696559 Msa0818700:CDS
GGTGAATATTCGCGGTTAAT+AGG 0.217595 5_3:-54694237 None:intergenic
AGTCCAAGTTGTTAAATATT+TGG 0.219268 5_3:+54694208 Msa0818700:five_prime_UTR
TTGGATTAACATCTCTGATA+TGG 0.220811 5_3:-54698630 None:intergenic
TACAAGTTTGATTTGAAAAT+AGG 0.232991 5_3:+54700307 Msa0818700:CDS
ACCAAACACCAAATTGCTTT+TGG 0.233126 5_3:+54697141 Msa0818700:CDS
CGATGATGTCAAGCATGTTT+TGG 0.250231 5_3:+54699520 Msa0818700:CDS
GAACTTTCCCAAAAGCAATT+TGG 0.266172 5_3:-54697149 None:intergenic
AATAGATTGGATGAAGAAAT+TGG 0.272442 5_3:+54698574 Msa0818700:CDS
CACAGGTAGTTTGGATGATA+TGG 0.277316 5_3:+54698032 Msa0818700:CDS
GCTGGCCTTCTGACATTTGA+TGG 0.281978 5_3:-54697644 None:intergenic
CCGACAAGCATTCGGTTTGC+TGG 0.293333 5_3:-54697662 None:intergenic
GAATTGAGAATATTGCTTTC+CGG 0.294300 5_3:+54699764 Msa0818700:CDS
GCATTTGAAGCAGTTATCTT+TGG 0.295235 5_3:+54696444 Msa0818700:intron
GGTTTCAAATGCAATTGTTT+TGG 0.298462 5_3:+54698510 Msa0818700:intron
CCCAAAAGCAATTTGGTGTT+TGG 0.300581 5_3:-54697142 None:intergenic
GTGAATATTCGCGGTTAATA+GGG 0.303539 5_3:-54694236 None:intergenic
AACACTTCGTGAGGGAATTT+CGG 0.305259 5_3:-54699842 None:intergenic
TCGTCCTGGTCAGCAGAAAA+TGG 0.306006 5_3:+54700678 Msa0818700:CDS
GAATGCTTGTCGGGAGCTTC+TGG 0.310694 5_3:+54697672 Msa0818700:CDS
AACCTTGATTTGGTACTTCT+AGG 0.320287 5_3:-54699713 None:intergenic
AGGAAAGGAGTAGGCCAAAA+AGG 0.323674 5_3:+54699896 Msa0818700:CDS
CATTTCATCTACTACTGCTT+TGG 0.327480 5_3:-54697566 None:intergenic
TTTCTTTGGCGAAACGTTGC+AGG 0.327818 5_3:+54699200 Msa0818700:CDS
GAAACTCAAAAGCTTTCTTT+TGG 0.332440 5_3:-54699181 None:intergenic
AAGGAAGAGCACAGGTAGTT+TGG 0.335049 5_3:+54698023 Msa0818700:CDS
TGTAAGGATGTCAAAGTATT+CGG 0.335589 5_3:+54697025 Msa0818700:CDS
TTTCATTCTTCATGATCATA+TGG 0.351437 5_3:-54700891 None:intergenic
ATATGGATCTTGGAAATAGA+TGG 0.353135 5_3:+54698049 Msa0818700:CDS
AGTTCTTAATCGATCTTTCA+TGG 0.353313 5_3:+54697167 Msa0818700:CDS
TTCTCGTGATGAACCGATAT+CGG 0.354901 5_3:+54699100 Msa0818700:CDS
TCTTACCAAAATAGAGATAA+AGG 0.358309 5_3:-54694516 None:intergenic
CTTTGAACGTGGGAAAATAA+TGG 0.359666 5_3:+54700501 Msa0818700:CDS
AAGTACTTTGGATGGCAAAA+AGG 0.360471 5_3:+54700442 Msa0818700:CDS
AGATTGAAGATGATATTCTA+AGG 0.360520 5_3:+54700836 Msa0818700:CDS
AATACAGTTGCTACTCTTCC+TGG 0.363378 5_3:+54699482 Msa0818700:CDS
TGAGGTAATAATAATGTTGC+TGG 0.374932 5_3:-54694409 None:intergenic
TCGTAATGCTCAACGGCTAT+TGG 0.376136 5_3:-54697808 None:intergenic
ATTTAAACCAACTGAATCAT+TGG 0.378535 5_3:-54696664 None:intergenic
TTCTTCCACTGGTCAGTGAT+AGG 0.381885 5_3:-54698258 None:intergenic
CATCACACTGCTTCTCCTCT+TGG 0.382571 5_3:-54699010 None:intergenic
AGTTTGGATGATATGGATCT+TGG 0.384784 5_3:+54698039 Msa0818700:CDS
GGAAAGCAATATTCTCAATT+CGG 0.386118 5_3:-54699762 None:intergenic
TAGCTACCTGAAGTTATTCC+CGG 0.388228 5_3:+54699331 Msa0818700:CDS
TGAATCAAGTACACCGGTAT+AGG 0.394727 5_3:-54699428 None:intergenic
CTTCTAGCAACGTTGCCGTT+TGG 0.395047 5_3:-54697832 None:intergenic
TACTTCGCAGTATAGTCATT+TGG 0.402392 5_3:+54697879 Msa0818700:CDS
TGCTCCTGTTTCTTACGTCC+TGG 0.403001 5_3:+54696606 Msa0818700:CDS
ATTCTGCTTGAACACCCTAT+AGG 0.408396 5_3:-54699462 None:intergenic
TTGTGTTACATTTCTTCCAC+TGG 0.408645 5_3:-54698269 None:intergenic
GCCGCAGAGCAGTCCGGAAA+AGG 0.412132 5_3:+54697618 Msa0818700:CDS
CAGAATCTCATGCTGTATAT+CGG 0.414243 5_3:-54700131 None:intergenic
AGCACGCATACGTCGATTCC+AGG 0.418601 5_3:-54696624 None:intergenic
CAGCAAACCGAATGCTTGTC+GGG 0.422319 5_3:+54697663 Msa0818700:CDS
ATGCAACTGCACGAACTTCA+AGG 0.425193 5_3:+54694286 Msa0818700:five_prime_UTR
TGGCTGTACATGCCTGCGTT+TGG 0.429276 5_3:-54697464 None:intergenic
GAATATTTCGAGAAGTACTT+TGG 0.429814 5_3:+54700430 Msa0818700:CDS
ACACTTGAGCCATAAACTTT+CGG 0.433248 5_3:-54699646 None:intergenic
AGATGATATTCTAAGGGAAA+TGG 0.434151 5_3:+54700843 Msa0818700:CDS
TCATGGTCGTAGAACCTATA+GGG 0.434888 5_3:+54699448 Msa0818700:CDS
ACTCTTTCCAAGTGGTTCTT+CGG 0.435241 5_3:-54700750 None:intergenic
GGTTTATGTTTATCAGCTCT+TGG 0.436984 5_3:+54700699 Msa0818700:CDS
GTTTATCAGCTCTTGGTGAC+AGG 0.443817 5_3:+54700706 Msa0818700:CDS
AGAAATGAGAACTCTTTGTA+AGG 0.443918 5_3:+54697009 Msa0818700:CDS
ATACCGGTGTACTTGATTCA+TGG 0.445701 5_3:+54699431 Msa0818700:CDS
ACCTTGATTTGGTACTTCTA+GGG 0.446221 5_3:-54699712 None:intergenic
TTTATCGATGTTTATGAAGC+AGG 0.449793 5_3:+54700055 Msa0818700:CDS
GGGAGCTTCTGGTGTACAAT+AGG 0.449977 5_3:+54697683 Msa0818700:CDS
CCGGACTGCTCTGCGGCAAA+CGG 0.450320 5_3:-54697612 None:intergenic
GAATTAATGACCAAACGCTT+TGG 0.451444 5_3:-54699130 None:intergenic
AGATAATCACCATATGGTTA+TGG 0.453918 5_3:+54696527 Msa0818700:CDS
ATCATCTTCATCATCCTTGG+TGG 0.454382 5_3:-54699051 None:intergenic
CGGAAGAAAACCAAAGCGTT+TGG 0.455256 5_3:+54699120 Msa0818700:CDS
AGGAAAATTGACTCTAATGT+TGG 0.456402 5_3:+54699983 Msa0818700:CDS
GAAAATAATGGATAAATTTG+AGG 0.459943 5_3:+54700513 Msa0818700:CDS
ACCCTAAATACAAGAGGAAA+AGG 0.460092 5_3:+54699876 Msa0818700:CDS
TCATCATCTTATAATGTTGA+CGG 0.460428 5_3:+54697430 Msa0818700:CDS
GGAAGTTCTGATGGTTTACC+AGG 0.461190 5_3:+54700076 Msa0818700:CDS
GATTCCAGGACGTAAGAAAC+AGG 0.463849 5_3:-54696610 None:intergenic
TATTCTTGAAATAAGCGAAC+AGG 0.465250 5_3:-54700412 None:intergenic
TTGGATGTTTCTATCCTGAC+AGG 0.466403 5_3:-54697547 None:intergenic
CTTGACATCATCGGTAGGCT+TGG 0.467522 5_3:-54699510 None:intergenic
GTTGGAGAGGAAAGAATTCA+AGG 0.467850 5_3:+54700001 Msa0818700:CDS
ACACGAGCACTCTGAGCCAT+GGG 0.470862 5_3:-54696942 None:intergenic
TCTTCCCCGGGAATAACTTC+AGG 0.477453 5_3:-54699337 None:intergenic
GAGGGAAAGTCCTGGACTCT+TGG 0.479228 5_3:+54699670 Msa0818700:CDS
ACATCCGAGTGTTCTAATCA+TGG 0.479550 5_3:+54699574 Msa0818700:CDS
GTCATCATCTTCATCATCCT+TGG 0.479586 5_3:-54699054 None:intergenic
TTGTGGCGGTGTTGATCAAA+AGG 0.480329 5_3:+54697735 Msa0818700:CDS
CAGACATTCGTTTAAGGTCA+AGG 0.481109 5_3:+54696565 Msa0818700:CDS
CCGCAGAGCAGTCCGGAAAA+GGG 0.482980 5_3:+54697619 Msa0818700:CDS
CACTTGGATCAATACATCCT+TGG 0.483200 5_3:+54700218 Msa0818700:CDS
TTTCACAGATAATCACCATA+TGG 0.483667 5_3:+54696521 Msa0818700:CDS
TAGGAGGGCTAAAACCCAAA+AGG 0.484813 5_3:+54697702 Msa0818700:CDS
AGAAGCTCCCGACAAGCATT+CGG 0.485361 5_3:-54697670 None:intergenic
ACGTGCATGATCAGCTCTCT+TGG 0.486701 5_3:-54697386 None:intergenic
GGACCAAATATTTAACAACT+TGG 0.489632 5_3:-54694211 None:intergenic
CACCTTTGTCCATAACCATA+TGG 0.489824 5_3:-54696536 None:intergenic
CTGAATCATTGGCTCGTTGA+GGG 0.490012 5_3:-54696653 None:intergenic
GAGTTCATAAAAGTTAAATC+AGG 0.490264 5_3:+54696483 Msa0818700:CDS
GTTGCAGGGTCTACAAATCC+AGG 0.493284 5_3:+54699215 Msa0818700:CDS
TTCATGGTCGTAGAACCTAT+AGG 0.495823 5_3:+54699447 Msa0818700:CDS
AGGAGGGCTAAAACCCAAAA+GGG 0.498084 5_3:+54697703 Msa0818700:CDS
CAACGAGCCAATGATTCAGT+TGG 0.498221 5_3:+54696657 Msa0818700:CDS
AAACAATGATGAACAGAAAG+AGG 0.499384 5_3:+54695862 Msa0818700:exon
AGCTGTCAAACTAATTCCTT+CGG 0.501364 5_3:-54700584 None:intergenic
TTGACATCATCGGTAGGCTT+GGG 0.501969 5_3:-54699509 None:intergenic
TTAGAAACATGCCACCTGTC+AGG 0.502705 5_3:+54697533 Msa0818700:CDS
AAGCAGTTATCTTTGGCTCA+TGG 0.503439 5_3:+54696451 Msa0818700:CDS
TTCAAAGAGCTCGAGTTCCC+CGG 0.503714 5_3:-54700485 None:intergenic
ATTGGATCAGCATCTTGATC+AGG 0.504734 5_3:-54697790 None:intergenic
ATTGCACGTGCGTTTCGTCC+TGG 0.505656 5_3:+54700664 Msa0818700:CDS
TGGATTAACATCTCTGATAT+GGG 0.506421 5_3:-54698629 None:intergenic
TATGATCATGAAGAATGAAA+AGG 0.508729 5_3:+54700894 Msa0818700:CDS
ATCCTCTCCATGAGAAATCT+CGG 0.510077 5_3:-54698319 None:intergenic
GACACGAGCACTCTGAGCCA+TGG 0.510084 5_3:-54696943 None:intergenic
TGGATCAATACATCCTTGGC+TGG 0.513481 5_3:+54700222 Msa0818700:CDS
CCAGCAAACCGAATGCTTGT+CGG 0.515745 5_3:+54697662 Msa0818700:CDS
TTGTGAACATGATAATAGAT+TGG 0.516132 5_3:+54698561 Msa0818700:CDS
GCAATATTTGATCGAGTCAC+GGG 0.516637 5_3:+54699931 Msa0818700:CDS
GCTCTTGGTGACAGGTTCGT+TGG 0.516936 5_3:+54700714 Msa0818700:CDS
ATCAAAAGCTCTAACTCGAG+AGG 0.518196 5_3:-54700193 None:intergenic
TCTTAACAACACGGTAGATA+AGG 0.519104 5_3:-54700354 None:intergenic
GAACTAGAGGTCTCTTCCCC+GGG 0.519512 5_3:-54699349 None:intergenic
TCGGTAGGCTTGGGAACTCC+AGG 0.523809 5_3:-54699500 None:intergenic
CCGTGTTGTTAAGAACGAAA+AGG 0.524491 5_3:+54700363 Msa0818700:CDS
CAAGTGGGAGATTCCTATAC+CGG 0.524870 5_3:+54699415 Msa0818700:CDS
AAGAAATGTAACACAACAAA+CGG 0.524918 5_3:+54698276 Msa0818700:CDS
CCGTTTGCCGCAGAGCAGTC+CGG 0.525321 5_3:+54697612 Msa0818700:CDS
ATGGATAAATTTGAGGAGCC+TGG 0.525717 5_3:+54700520 Msa0818700:CDS
CTTTGGCTCATGGCATCCTG+TGG 0.526654 5_3:+54696461 Msa0818700:CDS
AGCGAACAGGCGCAATGTTG+TGG 0.527089 5_3:-54700399 None:intergenic
AGCTTCTGGTGTACAATAGG+AGG 0.528440 5_3:+54697686 Msa0818700:CDS
AGCTACCTGAAGTTATTCCC+GGG 0.528782 5_3:+54699332 Msa0818700:CDS
GTTTATGGCTCAAGTGTTGA+GGG 0.528816 5_3:+54699652 Msa0818700:CDS
GATTCGGCTTCAATTAGCCC+TGG 0.529383 5_3:-54699233 None:intergenic
CTTGGTGACAGGTTCGTTGG+AGG 0.531022 5_3:+54700717 Msa0818700:CDS
AGAACTAGAGGTCTCTTCCC+CGG 0.532388 5_3:-54699350 None:intergenic
ATTTCGAGAAGTACTTTGGA+TGG 0.534334 5_3:+54700434 Msa0818700:CDS
TCAATCACAGCTTGTGCCGA+AGG 0.534805 5_3:+54700568 Msa0818700:CDS
TAATAATGTTGCTGGAAATG+AGG 0.535076 5_3:-54694401 None:intergenic
AGTTTATGGCTCAAGTGTTG+AGG 0.535176 5_3:+54699651 Msa0818700:CDS
TATGAAGCAGGAAGTTCTGA+TGG 0.535273 5_3:+54700067 Msa0818700:CDS
ATAGGAGGTTCTTCTATGAC+AGG 0.535482 5_3:-54698240 None:intergenic
TATATTGAACAAGGTTCACT+TGG 0.536450 5_3:+54696983 Msa0818700:CDS
AGTGTATAAATTTGTAAACC+TGG 0.536546 5_3:-54700094 None:intergenic
AGAGAAGAGAGAAGAAGATG+AGG 0.537744 5_3:-54694427 None:intergenic
ATGTTGAGAAATGTGACAAA+TGG 0.537792 5_3:+54700031 Msa0818700:CDS
TCAACTCATTTAAGAAATAA+CGG 0.539258 5_3:+54698123 Msa0818700:CDS
TCATCTTCATCATCCTTGGT+GGG 0.540466 5_3:-54699050 None:intergenic
CGCAATATTTGATCGAGTCA+CGG 0.541175 5_3:+54699930 Msa0818700:CDS
GGACTCTTGGTACTTGATGA+AGG 0.541459 5_3:+54699683 Msa0818700:CDS
TATTCTAAGGGAAATGGTTG+AGG 0.543285 5_3:+54700849 Msa0818700:CDS
GTGGAAACCGAGATTTCTCA+TGG 0.543372 5_3:+54698312 Msa0818700:CDS
CGGTTAGTACTAAAACTTCA+CGG 0.543504 5_3:-54700465 None:intergenic
TAATATTCTGTAAATACGAA+TGG 0.543929 5_3:-54698209 None:intergenic
ATACTTCAACACTCTATGCT+TGG 0.544106 5_3:+54699814 Msa0818700:CDS
TTCCACTGGTCAGTGATAGG+AGG 0.547139 5_3:-54698255 None:intergenic
GAAGTTAAAGAGTTGGATGT+TGG 0.547524 5_3:+54697505 Msa0818700:CDS
GACAGGTGGCATGTTTCTAA+AGG 0.548270 5_3:-54697530 None:intergenic
TGGCTGCGAAGTTAAAGAGT+TGG 0.548459 5_3:+54697498 Msa0818700:CDS
TATGGATCTTGGAAATAGAT+GGG 0.548949 5_3:+54698050 Msa0818700:CDS
CATCACGAGAAGTGTCGGTC+GGG 0.549470 5_3:-54699088 None:intergenic
CTCGGATGAAGACCACCGAT+GGG 0.551911 5_3:-54697104 None:intergenic
CGGTTCATCACGAGAAGTGT+CGG 0.553602 5_3:-54699093 None:intergenic
CATCCGAGTGTTCTAATCAT+GGG 0.556634 5_3:+54699575 Msa0818700:CDS
TGTAACACAACAAACGGTGT+TGG 0.558100 5_3:+54698282 Msa0818700:CDS
ATATCTCATACTCCTGGAGC+CGG 0.558114 5_3:+54699278 Msa0818700:CDS
AGCGACATGTTTAAGTGCAG+TGG 0.558265 5_3:+54700166 Msa0818700:CDS
ACCCTAGAAGTACCAAATCA+AGG 0.558435 5_3:+54699711 Msa0818700:CDS
GATGTTTCTATCCTGACAGG+TGG 0.561215 5_3:-54697544 None:intergenic
TGTGTGATATCTCATACTCC+TGG 0.561503 5_3:+54699272 Msa0818700:CDS
TTCATGGTTAGTTGTTACAT+CGG 0.564104 5_3:+54697183 Msa0818700:CDS
GATCTTGGAAATAGATGGGA+AGG 0.564793 5_3:+54698054 Msa0818700:CDS
TCTTCTTAGATACAATCGCT+AGG 0.565118 5_3:+54699963 Msa0818700:CDS
TCGCAGCCAACGTAACGCTC+TGG 0.565753 5_3:-54697484 None:intergenic
CAAAACATGCTTGACATCAT+CGG 0.566712 5_3:-54699519 None:intergenic
CAAGAGGAGAAGCAGTGTGA+TGG 0.568341 5_3:+54699011 Msa0818700:CDS
ACTGAATCATTGGCTCGTTG+AGG 0.568958 5_3:-54696654 None:intergenic
ATCGAAGACAGGATTTCATG+AGG 0.569999 5_3:+54698089 Msa0818700:CDS
AAACGGTGTTGGACAAAATG+TGG 0.570352 5_3:+54698293 Msa0818700:CDS
TTCTTTGGCGAAACGTTGCA+GGG 0.571447 5_3:+54699201 Msa0818700:CDS
ATAGCAACTTGAGAAACAAT+CGG 0.574210 5_3:-54697355 None:intergenic
TTCTCAGCTTGCCAACGAGA+AGG 0.574330 5_3:-54700814 None:intergenic
CCTCGGATGAAGACCACCGA+TGG 0.578288 5_3:-54697105 None:intergenic
GAATCATTGGCTCGTTGAGG+GGG 0.580007 5_3:-54696651 None:intergenic
TTTCAGTGAGGCGTTTGTCG+AGG 0.580078 5_3:+54700789 Msa0818700:CDS
CACCATATGGTTATGGACAA+AGG 0.580592 5_3:+54696534 Msa0818700:CDS
TCAGCATCTTGATCAGGAAG+AGG 0.582114 5_3:-54697784 None:intergenic
GATTGAAGATGATATTCTAA+GGG 0.582615 5_3:+54700837 Msa0818700:CDS
AACTCGAGCTCTTTGAACGT+GGG 0.583915 5_3:+54700491 Msa0818700:CDS
AAGAGGAAAAGGAAAGGAGT+AGG 0.584586 5_3:+54699887 Msa0818700:CDS
TCATCAAGTACCAAGAGTCC+AGG 0.586811 5_3:-54699680 None:intergenic
TGAATATTCGCGGTTAATAG+GGG 0.587116 5_3:-54694235 None:intergenic
CGGTACTAACATGCCATCGT+CGG 0.591646 5_3:-54697335 None:intergenic
CATGTGAAAATCAGCCCCAT+CGG 0.591882 5_3:+54697089 Msa0818700:CDS
AAACGGAACAAGAATGATAA+CGG 0.591966 5_3:-54697595 None:intergenic
AGTATCTTTGATACTCCACC+AGG 0.592133 5_3:-54700538 None:intergenic
TGAATCATTGGCTCGTTGAG+GGG 0.592171 5_3:-54696652 None:intergenic
AATGCTTTCAACACTTCGTG+AGG 0.592963 5_3:-54699851 None:intergenic
GAAAGAACTTGAAGTGTCAC+TGG 0.593151 5_3:+54698374 Msa0818700:CDS
GAACTCGAGCTCTTTGAACG+TGG 0.594844 5_3:+54700490 Msa0818700:CDS
GGTATAAAGAATTTATCAAG+TGG 0.595054 5_3:+54699399 Msa0818700:CDS
AACCGAGATTTCTCATGGAG+AGG 0.595400 5_3:+54698317 Msa0818700:CDS
AAGCTGAAATGGATATGTTG+TGG 0.597378 5_3:+54698352 Msa0818700:CDS
TCTAAGGGAAATGGTTGAGG+AGG 0.597803 5_3:+54700852 Msa0818700:CDS
GTTTGGATCGTAATGCTCAA+CGG 0.598237 5_3:-54697815 None:intergenic
ATAAGTACCGAAGAACCACT+TGG 0.600109 5_3:+54700743 Msa0818700:CDS
AAGTTACAAAGGAAGAGCAC+AGG 0.600175 5_3:+54698015 Msa0818700:CDS
GGAAGAGGAATAATAGCAAG+TGG 0.600471 5_3:-54697769 None:intergenic
ATTGACATCGTGAAGAAACA+TGG 0.600782 5_3:-54697978 None:intergenic
TCGAAGACAGGATTTCATGA+GGG 0.600969 5_3:+54698090 Msa0818700:CDS
GTAGTGGTGGTGAATATTCG+CGG 0.601159 5_3:-54694245 None:intergenic
GTGAAAATCAGCCCCATCGG+TGG 0.602877 5_3:+54697092 Msa0818700:CDS
TTGTCGAGGATCCTTCTCGT+TGG 0.606121 5_3:+54700803 Msa0818700:CDS
AATTGACTCTAATGTTGGAG+AGG 0.608578 5_3:+54699988 Msa0818700:CDS
GTTGAGCATTACGATCCAAA+CGG 0.610151 5_3:+54697817 Msa0818700:CDS
GAGTCTCATATTGATGTCAT+CGG 0.611926 5_3:+54697304 Msa0818700:CDS
TCATCACGAGAAGTGTCGGT+CGG 0.612178 5_3:-54699089 None:intergenic
CGACACCCACTCTTTCCAAG+TGG 0.614649 5_3:-54700758 None:intergenic
CCATCGGTGGTCTTCATCCG+AGG 0.614878 5_3:+54697105 Msa0818700:CDS
CATTAGACCCTAAATACAAG+AGG 0.615011 5_3:+54699870 Msa0818700:CDS
ATCGGATTCAAAACCGACGA+TGG 0.615258 5_3:+54697322 Msa0818700:CDS
GTCAACTTCTATATTGAACA+AGG 0.615983 5_3:+54696974 Msa0818700:CDS
GGGTGCCATCAAATGTCAGA+AGG 0.616154 5_3:+54697639 Msa0818700:CDS
CAAGTGTTGAGGGAAAGTCC+TGG 0.616594 5_3:+54699662 Msa0818700:CDS
TCAAAAGCTCTAACTCGAGA+GGG 0.618528 5_3:-54700192 None:intergenic
TTGGCTCTACTAAGTTACAA+AGG 0.618837 5_3:+54698004 Msa0818700:CDS
TGGTAATGAAGAGCAATCCT+CGG 0.619389 5_3:-54697122 None:intergenic
GAAGAACCACTTGGAAAGAG+TGG 0.620292 5_3:+54700752 Msa0818700:CDS
ATGCTTTCAACACTTCGTGA+GGG 0.623531 5_3:-54699850 None:intergenic
GGAATATACTGCTGTAGATG+TGG 0.625004 5_3:+54698595 Msa0818700:CDS
CATTTAAGAAATAACGGCGA+AGG 0.625072 5_3:+54698129 Msa0818700:CDS
AAATTCAGTGTGGCGCCAAG+AGG 0.625626 5_3:+54698995 Msa0818700:CDS
GTATAAAGAATTTATCAAGT+GGG 0.625662 5_3:+54699400 Msa0818700:CDS
AAGATCAGTAGAAAACAAGA+TGG 0.627489 5_3:+54697231 Msa0818700:CDS
TAGCCCATGATTAGAACACT+CGG 0.632210 5_3:-54699578 None:intergenic
GCTTCTGGTGTACAATAGGA+GGG 0.641634 5_3:+54697687 Msa0818700:CDS
AAGAACCACTTGGAAAGAGT+GGG 0.646979 5_3:+54700753 Msa0818700:CDS
AAATACAAGAGGAAAAGGAA+AGG 0.649041 5_3:+54699881 Msa0818700:CDS
TGGTTAATAATCCTAAACCA+AGG 0.650473 5_3:+54697899 Msa0818700:CDS
TAAAGACAGAACTTTAAATG+CGG 0.651133 5_3:+54698167 Msa0818700:CDS
GATAAATTTGAGGAGCCTGG+TGG 0.654281 5_3:+54700523 Msa0818700:CDS
ACATGCTTGACATCATCGGT+AGG 0.656056 5_3:-54699515 None:intergenic
CAAAAGGGGAAGAAGACTTG+TGG 0.658195 5_3:+54697718 Msa0818700:CDS
GCTACCTGAAGTTATTCCCG+GGG 0.659114 5_3:+54699333 Msa0818700:CDS
TTGCAGGGTCTACAAATCCA+GGG 0.660559 5_3:+54699216 Msa0818700:CDS
GCTTACGACGTTCCAAACGC+AGG 0.660746 5_3:+54697452 Msa0818700:CDS
TGCATCTCGTGTGATCATGT+TGG 0.662663 5_3:+54700606 Msa0818700:CDS
AAGTTGCTCATATACAACAT+TGG 0.665395 5_3:+54695832 Msa0818700:five_prime_UTR
AAGGGGAAGAAGACTTGTGG+CGG 0.670203 5_3:+54697721 Msa0818700:CDS
GGAGGGCTAAAACCCAAAAG+GGG 0.676635 5_3:+54697704 Msa0818700:CDS
ATATTCGCGGTTAATAGGGG+AGG 0.679036 5_3:-54694232 None:intergenic
AACCTCCTATCACTGACCAG+TGG 0.680042 5_3:+54698253 Msa0818700:CDS
GTACAGCCAGAGCGTTACGT+TGG 0.681484 5_3:+54697478 Msa0818700:CDS
CGACCATGAATCAAGTACAC+CGG 0.682151 5_3:-54699434 None:intergenic
GATGACATCAATATGAGACT+CGG 0.684735 5_3:-54697302 None:intergenic
ATTAACATCTCTGATATGGG+TGG 0.685046 5_3:-54698626 None:intergenic
TCCTTGGCTGGTCAAAACTG+CGG 0.685458 5_3:+54700234 Msa0818700:CDS
CACGAGCACTCTGAGCCATG+GGG 0.689089 5_3:-54696941 None:intergenic
GAAACAGGAGCAATCTGACA+CGG 0.695086 5_3:-54696595 None:intergenic
ATGGATCAAACTCTTGTATG+CGG 0.695811 5_3:-54698190 None:intergenic
AGATAAAGAAGAGCCCACCA+AGG 0.706701 5_3:+54699037 Msa0818700:CDS
TCGGATGAAGACCACCGATG+GGG 0.711748 5_3:-54697103 None:intergenic
TCTATACAGAGAAAGCCCCA+TGG 0.713635 5_3:+54696926 Msa0818700:CDS
TGATCATGTTGGATTCCGAG+TGG 0.740440 5_3:+54700617 Msa0818700:CDS
GGCAGGTTGAAAATTCAGTG+TGG 0.744598 5_3:+54698985 Msa0818700:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTTTACCATAAA+AGG - chr5_3:54695011-54695030 None:intergenic 10.0%
!! AATATGATTATATAAAGTTT+AGG + chr5_3:54695043-54695062 Msa0818700:intron 10.0%
!!! AACATAGTTTTTTTTTTTTT+CGG + chr5_3:54695224-54695243 Msa0818700:intron 10.0%
!! TTCATTAATTAATATTGAAA+AGG + chr5_3:54695595-54695614 Msa0818700:intron 10.0%
!!! TTATCTTTTATTATAGAAAA+AGG + chr5_3:54698924-54698943 Msa0818700:intron 10.0%
!! AACATTAAATTTATGATTCA+TGG - chr5_3:54695183-54695202 None:intergenic 15.0%
!! TGAATCATAAATTTAATGTT+TGG + chr5_3:54695183-54695202 Msa0818700:intron 15.0%
!! GAATCATAAATTTAATGTTT+GGG + chr5_3:54695184-54695203 Msa0818700:intron 15.0%
!! AATCATAAATTTAATGTTTG+GGG + chr5_3:54695185-54695204 Msa0818700:intron 15.0%
!! TATTAATTAATGAAAGCTTA+GGG - chr5_3:54695589-54695608 None:intergenic 15.0%
!! ATATTAATTAATGAAAGCTT+AGG - chr5_3:54695590-54695609 None:intergenic 15.0%
!!! AAAATTTAAGGTATATCTTA+CGG + chr5_3:54696853-54696872 Msa0818700:intron 15.0%
!!! TTTCTTTTTAATTATAGGTT+TGG + chr5_3:54696885-54696904 Msa0818700:intron 15.0%
!!! TTCTTTTTAATTATAGGTTT+GGG + chr5_3:54696886-54696905 Msa0818700:intron 15.0%
!!! AATTACCTTTATCTCTATTT+TGG + chr5_3:54694511-54694530 Msa0818700:five_prime_UTR 20.0%
!!! TTTTTTTTTCACTTTGACTT+AGG + chr5_3:54694679-54694698 Msa0818700:intron 20.0%
!!! CTTTTGGAAAAACAATAAAA+AGG - chr5_3:54694743-54694762 None:intergenic 20.0%
!! CTAAAAGTCATTCTTAAAAT+AGG - chr5_3:54694788-54694807 None:intergenic 20.0%
!! ATATAAAGTTTAGGTGAATT+AGG + chr5_3:54695052-54695071 Msa0818700:intron 20.0%
!! ATCATAAATTTAATGTTTGG+GGG + chr5_3:54695186-54695205 Msa0818700:intron 20.0%
!!! TAGTTTTTTTTTTTTTCGGA+AGG + chr5_3:54695228-54695247 Msa0818700:intron 20.0%
!! AAATTATGAATAAAATGCTC+TGG - chr5_3:54695281-54695300 None:intergenic 20.0%
!!! ATAATTTTGCTTTCATCTTT+TGG + chr5_3:54695294-54695313 Msa0818700:intron 20.0%
!! TATCTATAGATCATTTAGAA+CGG - chr5_3:54695725-54695744 None:intergenic 20.0%
!! TTGAACAGAATAAATATCAA+TGG + chr5_3:54695972-54695991 Msa0818700:intron 20.0%
!!! AAAATTTTGAGGAAGTTAAT+AGG - chr5_3:54696413-54696432 None:intergenic 20.0%
!! TCAACTCATTTAAGAAATAA+CGG + chr5_3:54698123-54698142 Msa0818700:CDS 20.0%
!! TAATATTCTGTAAATACGAA+TGG - chr5_3:54698212-54698231 None:intergenic 20.0%
!!! TTTGAAACCTGATAAAATAA+TGG - chr5_3:54698499-54698518 None:intergenic 20.0%
!! TAAACTTGACTTACAAAAAT+TGG - chr5_3:54698652-54698671 None:intergenic 20.0%
!! AATAAGCTAAAAACATCTTA+TGG - chr5_3:54698837-54698856 None:intergenic 20.0%
!! GTATAAAGAATTTATCAAGT+GGG + chr5_3:54699400-54699419 Msa0818700:CDS 20.0%
!!! ATTATTTTGAAACAAAGTAC+CGG - chr5_3:54699786-54699805 None:intergenic 20.0%
!!! TTCTCAGAAATTTTTAACAA+AGG + chr5_3:54700261-54700280 Msa0818700:CDS 20.0%
!!! TACAAGTTTGATTTGAAAAT+AGG + chr5_3:54700307-54700326 Msa0818700:CDS 20.0%
!!! GAAAATAATGGATAAATTTG+AGG + chr5_3:54700513-54700532 Msa0818700:CDS 20.0%
! AGTCCAAGTTGTTAAATATT+TGG + chr5_3:54694208-54694227 Msa0818700:five_prime_UTR 25.0%
! TCTTACCAAAATAGAGATAA+AGG - chr5_3:54694519-54694538 None:intergenic 25.0%
! TAGGTTCATGAAGAAAAAAT+TGG + chr5_3:54694698-54694717 Msa0818700:intron 25.0%
!!! AAAAATTGGACTGATTTTTG+TGG + chr5_3:54694712-54694731 Msa0818700:intron 25.0%
!!! ACTTTTAGCATGTTTTTTTC+TGG + chr5_3:54694800-54694819 Msa0818700:intron 25.0%
!!! CTTTTAGCATGTTTTTTTCT+GGG + chr5_3:54694801-54694820 Msa0818700:intron 25.0%
!!! TTTTAGCATGTTTTTTTCTG+GGG + chr5_3:54694802-54694821 Msa0818700:intron 25.0%
! CTTAAAAAGATTGTCAATCA+AGG + chr5_3:54695105-54695124 Msa0818700:intron 25.0%
! TAGTTTATCGATAAATGATC+CGG + chr5_3:54695404-54695423 Msa0818700:intron 25.0%
!!! GATATATGAGACTTTTTTGT+TGG - chr5_3:54695474-54695493 None:intergenic 25.0%
! TCATTTGATCAAAAAGAAAG+AGG - chr5_3:54695936-54695955 None:intergenic 25.0%
! TCTGATTCTACAATACTAAA+AGG + chr5_3:54696007-54696026 Msa0818700:intron 25.0%
! AAAATGATTAAGTGCTTGTT+TGG + chr5_3:54696041-54696060 Msa0818700:intron 25.0%
! AATAAGCTGAAAACAACTTA+TGG - chr5_3:54696139-54696158 None:intergenic 25.0%
! GAGTTCATAAAAGTTAAATC+AGG + chr5_3:54696483-54696502 Msa0818700:CDS 25.0%
! ATTTAAACCAACTGAATCAT+TGG - chr5_3:54696667-54696686 None:intergenic 25.0%
! ATCTTAAAATGAACACTTAC+AGG - chr5_3:54696696-54696715 None:intergenic 25.0%
! CTGTTACAATTGTTACTATA+AGG - chr5_3:54696780-54696799 None:intergenic 25.0%
! TTTAATTGATGAACTGTAGT+TGG + chr5_3:54696830-54696849 Msa0818700:intron 25.0%
! AACTGTAGTTGGAAAATTTA+AGG + chr5_3:54696841-54696860 Msa0818700:intron 25.0%
!! AAGATGGTGTATCAAATTTT+GGG + chr5_3:54697247-54697266 Msa0818700:CDS 25.0%
! TCATCATCTTATAATGTTGA+CGG + chr5_3:54697430-54697449 Msa0818700:CDS 25.0%
!! AACAAATTGATGTTTTTCCT+TGG - chr5_3:54697919-54697938 None:intergenic 25.0%
! ATAAAAAGAAAATCGAAGAC+AGG + chr5_3:54698078-54698097 Msa0818700:CDS 25.0%
! TAAAGACAGAACTTTAAATG+CGG + chr5_3:54698167-54698186 Msa0818700:CDS 25.0%
! AAGAAATGTAACACAACAAA+CGG + chr5_3:54698276-54698295 Msa0818700:CDS 25.0%
! AGAAAAAACATAAGGAACTA+AGG - chr5_3:54698451-54698470 None:intergenic 25.0%
! GAAAACAGAGAAAAAACATA+AGG - chr5_3:54698459-54698478 None:intergenic 25.0%
!!! TTTTTTCTCTGTTTTCTCTA+AGG + chr5_3:54698463-54698482 Msa0818700:intron 25.0%
!!! ATCAGTTCCATTATTTTATC+AGG + chr5_3:54698489-54698508 Msa0818700:intron 25.0%
! TTGTGAACATGATAATAGAT+TGG + chr5_3:54698561-54698580 Msa0818700:CDS 25.0%
! AATAGATTGGATGAAGAAAT+TGG + chr5_3:54698574-54698593 Msa0818700:CDS 25.0%
! TTTCTTTCATTCTTGTATTC+TGG + chr5_3:54698727-54698746 Msa0818700:intron 25.0%
! TATGATAATCTTGTTGGTAT+TGG + chr5_3:54698964-54698983 Msa0818700:intron 25.0%
! GGTATAAAGAATTTATCAAG+TGG + chr5_3:54699399-54699418 Msa0818700:CDS 25.0%
! AGTGTATAAATTTGTAAACC+TGG - chr5_3:54700097-54700116 None:intergenic 25.0%
! AGATTGAAGATGATATTCTA+AGG + chr5_3:54700836-54700855 Msa0818700:CDS 25.0%
! GATTGAAGATGATATTCTAA+GGG + chr5_3:54700837-54700856 Msa0818700:CDS 25.0%
! TTTCATTCTTCATGATCATA+TGG - chr5_3:54700894-54700913 None:intergenic 25.0%
! TATGATCATGAAGAATGAAA+AGG + chr5_3:54700894-54700913 Msa0818700:CDS 25.0%
GGACCAAATATTTAACAACT+TGG - chr5_3:54694214-54694233 None:intergenic 30.0%
TAATAATGTTGCTGGAAATG+AGG - chr5_3:54694404-54694423 None:intergenic 30.0%
TGAGGTAATAATAATGTTGC+TGG - chr5_3:54694412-54694431 None:intergenic 30.0%
!! GATCATGTTTTTGATTGACT+TGG + chr5_3:54694630-54694649 Msa0818700:intron 30.0%
!! GCAATCTTTTTCATCTCTTT+TGG - chr5_3:54694759-54694778 None:intergenic 30.0%
!!! TTTAGCATGTTTTTTTCTGG+GGG + chr5_3:54694803-54694822 Msa0818700:intron 30.0%
TGCTAATTGTGTGCATAAAT+TGG + chr5_3:54694843-54694862 Msa0818700:intron 30.0%
AATTGAGCCTAGATTATCAA+AGG - chr5_3:54694981-54695000 None:intergenic 30.0%
! TTTGATAATCTAGGCTCAAT+TGG + chr5_3:54694980-54694999 Msa0818700:intron 30.0%
!! TCAATTGGTAGTACCTTTTA+TGG + chr5_3:54694995-54695014 Msa0818700:intron 30.0%
!! GACAATCTTTTTAAGCCTTA+AGG - chr5_3:54695100-54695119 None:intergenic 30.0%
!! CAAATTCTTCTGTTGATTTG+AGG - chr5_3:54695158-54695177 None:intergenic 30.0%
ATGAATAAAATGCTCTGGTA+GGG - chr5_3:54695276-54695295 None:intergenic 30.0%
TATGAATAAAATGCTCTGGT+AGG - chr5_3:54695277-54695296 None:intergenic 30.0%
! ATTTTGCTTTCATCTTTTGG+AGG + chr5_3:54695297-54695316 Msa0818700:intron 30.0%
!! ACCTCACTTTTGAAGATTAT+TGG + chr5_3:54695508-54695527 Msa0818700:intron 30.0%
!! CCTCACTTTTGAAGATTATT+GGG + chr5_3:54695509-54695528 Msa0818700:intron 30.0%
TCATTGATATACAGATGCAA+TGG - chr5_3:54695749-54695768 None:intergenic 30.0%
AAGTTGCTCATATACAACAT+TGG + chr5_3:54695832-54695851 Msa0818700:five_prime_UTR 30.0%
AAACAATGATGAACAGAAAG+AGG + chr5_3:54695862-54695881 Msa0818700:exon 30.0%
GATCAAAAAGAAAGAGGAAA+AGG - chr5_3:54695930-54695949 None:intergenic 30.0%
GATAGCTTATGAAAAGCTTA+TGG - chr5_3:54696163-54696182 None:intergenic 30.0%
! AAGCTTTTCATAAGCTATCT+TGG + chr5_3:54696164-54696183 Msa0818700:intron 30.0%
! TTAAGTTGTTTATCCAAGCA+CGG + chr5_3:54696301-54696320 Msa0818700:intron 30.0%
TAGATTAATAAATCCGTGCT+TGG - chr5_3:54696317-54696336 None:intergenic 30.0%
GCACGGATTTATTAATCTAT+AGG + chr5_3:54696318-54696337 Msa0818700:intron 30.0%
AGAATGTGATTGTATGATCA+TGG - chr5_3:54696368-54696387 None:intergenic 30.0%
! TGTTCAGAAGGAAAATTTTG+AGG - chr5_3:54696424-54696443 None:intergenic 30.0%
! TTAACTTTTATGAACTCCAC+AGG - chr5_3:54696480-54696499 None:intergenic 30.0%
TTTCACAGATAATCACCATA+TGG + chr5_3:54696521-54696540 Msa0818700:CDS 30.0%
AGATAATCACCATATGGTTA+TGG + chr5_3:54696527-54696546 Msa0818700:CDS 30.0%
CTTTATCAGACATTCGTTTA+AGG + chr5_3:54696559-54696578 Msa0818700:CDS 30.0%
GTCAACTTCTATATTGAACA+AGG + chr5_3:54696974-54696993 Msa0818700:CDS 30.0%
TATATTGAACAAGGTTCACT+TGG + chr5_3:54696983-54697002 Msa0818700:CDS 30.0%
AGAAATGAGAACTCTTTGTA+AGG + chr5_3:54697009-54697028 Msa0818700:CDS 30.0%
! TGTAAGGATGTCAAAGTATT+CGG + chr5_3:54697025-54697044 Msa0818700:CDS 30.0%
AGTTCTTAATCGATCTTTCA+TGG + chr5_3:54697167-54697186 Msa0818700:CDS 30.0%
! TTCATGGTTAGTTGTTACAT+CGG + chr5_3:54697183-54697202 Msa0818700:CDS 30.0%
AAGATCAGTAGAAAACAAGA+TGG + chr5_3:54697231-54697250 Msa0818700:CDS 30.0%
! CAAGATGGTGTATCAAATTT+TGG + chr5_3:54697246-54697265 Msa0818700:CDS 30.0%
ATAGCAACTTGAGAAACAAT+CGG - chr5_3:54697358-54697377 None:intergenic 30.0%
AAACGGAACAAGAATGATAA+CGG - chr5_3:54697598-54697617 None:intergenic 30.0%
TGGTTAATAATCCTAAACCA+AGG + chr5_3:54697899-54697918 Msa0818700:CDS 30.0%
! TTGATGTTTTTCCTTGGTTT+AGG - chr5_3:54697913-54697932 None:intergenic 30.0%
!!! TCTTCACGATGTCAATTTTT+TGG + chr5_3:54697985-54698004 Msa0818700:CDS 30.0%
ATATGGATCTTGGAAATAGA+TGG + chr5_3:54698049-54698068 Msa0818700:CDS 30.0%
TATGGATCTTGGAAATAGAT+GGG + chr5_3:54698050-54698069 Msa0818700:CDS 30.0%
TGATGTAGAAAAAGCTGAAA+TGG + chr5_3:54698341-54698360 Msa0818700:CDS 30.0%
AAGGAACTAAGGAAAAACAA+TGG - chr5_3:54698440-54698459 None:intergenic 30.0%
! GGTTTCAAATGCAATTGTTT+TGG + chr5_3:54698510-54698529 Msa0818700:intron 30.0%
TGGATTAACATCTCTGATAT+GGG - chr5_3:54698632-54698651 None:intergenic 30.0%
TTGGATTAACATCTCTGATA+TGG - chr5_3:54698633-54698652 None:intergenic 30.0%
TTCTATACATTGCATCTAGA+TGG + chr5_3:54698751-54698770 Msa0818700:intron 30.0%
CACTTGTATGATAATCTTGT+TGG + chr5_3:54698958-54698977 Msa0818700:intron 30.0%
! GAAACTCAAAAGCTTTCTTT+TGG - chr5_3:54699184-54699203 None:intergenic 30.0%
!!! AGAAAGCTTTTGAGTTTCTT+TGG + chr5_3:54699186-54699205 Msa0818700:CDS 30.0%
! GATGATGAGAAAAGTTTTTC+CGG - chr5_3:54699300-54699319 None:intergenic 30.0%
GGAAAGCAATATTCTCAATT+CGG - chr5_3:54699765-54699784 None:intergenic 30.0%
GAATTGAGAATATTGCTTTC+CGG + chr5_3:54699764-54699783 Msa0818700:CDS 30.0%
! TCCTTTTCCTCTTGTATTTA+GGG - chr5_3:54699880-54699899 None:intergenic 30.0%
! TTCCTTTTCCTCTTGTATTT+AGG - chr5_3:54699881-54699900 None:intergenic 30.0%
AAATACAAGAGGAAAAGGAA+AGG + chr5_3:54699881-54699900 Msa0818700:CDS 30.0%
! AGGAAAATTGACTCTAATGT+TGG + chr5_3:54699983-54700002 Msa0818700:CDS 30.0%
ATGTTGAGAAATGTGACAAA+TGG + chr5_3:54700031-54700050 Msa0818700:CDS 30.0%
TTTATCGATGTTTATGAAGC+AGG + chr5_3:54700055-54700074 Msa0818700:CDS 30.0%
!! TTAGAGCTTTTGATAACACT+TGG + chr5_3:54700202-54700221 Msa0818700:CDS 30.0%
TATTCTTGAAATAAGCGAAC+AGG - chr5_3:54700415-54700434 None:intergenic 30.0%
!! GAATATTTCGAGAAGTACTT+TGG + chr5_3:54700430-54700449 Msa0818700:CDS 30.0%
! AGATGATATTCTAAGGGAAA+TGG + chr5_3:54700843-54700862 Msa0818700:CDS 30.0%
TGAATATTCGCGGTTAATAG+GGG - chr5_3:54694238-54694257 None:intergenic 35.0%
GTGAATATTCGCGGTTAATA+GGG - chr5_3:54694239-54694258 None:intergenic 35.0%
AAAAAGAGGAGCAGAGAAAA+AGG - chr5_3:54694312-54694331 None:intergenic 35.0%
GTGAAAGCTGACATAAAAAG+AGG - chr5_3:54694326-54694345 None:intergenic 35.0%
! AACACTGCCTTTGATAATCT+AGG + chr5_3:54694971-54694990 Msa0818700:intron 35.0%
!! GATTTGAGGAACTTGTTGAT+AGG - chr5_3:54695144-54695163 None:intergenic 35.0%
! TTGTTATGACACGATTTTGC+TGG + chr5_3:54695371-54695390 Msa0818700:intron 35.0%
! TGTTATGACACGATTTTGCT+GGG + chr5_3:54695372-54695391 Msa0818700:intron 35.0%
CCCAATAATCTTCAAAAGTG+AGG - chr5_3:54695512-54695531 None:intergenic 35.0%
!! ACTTTTGAAGATTATTGGGC+CGG + chr5_3:54695513-54695532 Msa0818700:intron 35.0%
AATGAAAGCTTAGGGTTTAC+AGG - chr5_3:54695581-54695600 None:intergenic 35.0%
AAGACACGAAACAAAGCAAA+CGG - chr5_3:54695695-54695714 None:intergenic 35.0%
GAAATTTCCACTTACAGTCA+AGG - chr5_3:54695793-54695812 None:intergenic 35.0%
AAGAAAGAGGAAAAGGCTTA+CGG - chr5_3:54695923-54695942 None:intergenic 35.0%
AAGCACTAGTGAAACTGTTT+GGG + chr5_3:54696084-54696103 Msa0818700:intron 35.0%
AAACTGTTTGGGAGAACTTA+TGG + chr5_3:54696095-54696114 Msa0818700:intron 35.0%
GTATGATCATGGAAAACTGA+AGG - chr5_3:54696357-54696376 None:intergenic 35.0%
! GCATTTGAAGCAGTTATCTT+TGG + chr5_3:54696444-54696463 Msa0818700:intron 35.0%
ACTCTCAGGGAAAAAAATAC+AGG - chr5_3:54696730-54696749 None:intergenic 35.0%
!!! ATGGACTGTGTTCGATTTTT+TGG - chr5_3:54697072-54697091 None:intergenic 35.0%
! ACCAAACACCAAATTGCTTT+TGG + chr5_3:54697141-54697160 Msa0818700:CDS 35.0%
!! CCAAACACCAAATTGCTTTT+GGG + chr5_3:54697142-54697161 Msa0818700:CDS 35.0%
GAACTTTCCCAAAAGCAATT+TGG - chr5_3:54697152-54697171 None:intergenic 35.0%
! ATGGTGTATCAAATTTTGGG+AGG + chr5_3:54697250-54697269 Msa0818700:CDS 35.0%
GATGACATCAATATGAGACT+CGG - chr5_3:54697305-54697324 None:intergenic 35.0%
GAGTCTCATATTGATGTCAT+CGG + chr5_3:54697304-54697323 Msa0818700:CDS 35.0%
GAAGTTAAAGAGTTGGATGT+TGG + chr5_3:54697505-54697524 Msa0818700:CDS 35.0%
CATTTCATCTACTACTGCTT+TGG - chr5_3:54697569-54697588 None:intergenic 35.0%
TACTTCGCAGTATAGTCATT+TGG + chr5_3:54697879-54697898 Msa0818700:CDS 35.0%
ATTGACATCGTGAAGAAACA+TGG - chr5_3:54697981-54698000 None:intergenic 35.0%
!! TTGGCTCTACTAAGTTACAA+AGG + chr5_3:54698004-54698023 Msa0818700:CDS 35.0%
AGTTTGGATGATATGGATCT+TGG + chr5_3:54698039-54698058 Msa0818700:CDS 35.0%
CATTTAAGAAATAACGGCGA+AGG + chr5_3:54698129-54698148 Msa0818700:CDS 35.0%
TTGTGTTACATTTCTTCCAC+TGG - chr5_3:54698272-54698291 None:intergenic 35.0%
AAGCTGAAATGGATATGTTG+TGG + chr5_3:54698352-54698371 Msa0818700:CDS 35.0%
!!! GAGTTATTTTGATGACTCAG+AGG + chr5_3:54698401-54698420 Msa0818700:CDS 35.0%
! ACTTCTTCTAAGTTTTCCTC+AGG - chr5_3:54698541-54698560 None:intergenic 35.0%
ATTAACATCTCTGATATGGG+TGG - chr5_3:54698629-54698648 None:intergenic 35.0%
AGACTATTTGAGAGAGCTTA+TGG + chr5_3:54698793-54698812 Msa0818700:intron 35.0%
!! CTTATTTCTATACGCTTTCC+AGG + chr5_3:54698851-54698870 Msa0818700:intron 35.0%
! GTTGATTTCATAAGCTATCC+TGG - chr5_3:54698872-54698891 None:intergenic 35.0%
!! ATAATCTTGTTGGTATTGGC+AGG + chr5_3:54698968-54698987 Msa0818700:intron 35.0%
!!! CTTTGGTTTTCTTCCGATAT+CGG - chr5_3:54699116-54699135 None:intergenic 35.0%
GAATTAATGACCAAACGCTT+TGG - chr5_3:54699133-54699152 None:intergenic 35.0%
! TGCAATTTTTCTCTGAGTTC+AGG - chr5_3:54699155-54699174 None:intergenic 35.0%
! CAAGTATAGAGCGTAGTTTT+TGG - chr5_3:54699380-54699399 None:intergenic 35.0%
CAAAAACTACGCTCTATACT+TGG + chr5_3:54699378-54699397 Msa0818700:CDS 35.0%
CAAAACATGCTTGACATCAT+CGG - chr5_3:54699522-54699541 None:intergenic 35.0%
! GTTTTTAACATTGATGCGAG+AGG + chr5_3:54699607-54699626 Msa0818700:CDS 35.0%
ACACTTGAGCCATAAACTTT+CGG - chr5_3:54699649-54699668 None:intergenic 35.0%
!! ACCTTGATTTGGTACTTCTA+GGG - chr5_3:54699715-54699734 None:intergenic 35.0%
!! AACCTTGATTTGGTACTTCT+AGG - chr5_3:54699716-54699735 None:intergenic 35.0%
! ACATTTTCGCAACCTTGATT+TGG - chr5_3:54699726-54699745 None:intergenic 35.0%
ATACTTCAACACTCTATGCT+TGG + chr5_3:54699814-54699833 Msa0818700:CDS 35.0%
CATTAGACCCTAAATACAAG+AGG + chr5_3:54699870-54699889 Msa0818700:CDS 35.0%
ACCCTAAATACAAGAGGAAA+AGG + chr5_3:54699876-54699895 Msa0818700:CDS 35.0%
TCTTCTTAGATACAATCGCT+AGG + chr5_3:54699963-54699982 Msa0818700:CDS 35.0%
! AATTGACTCTAATGTTGGAG+AGG + chr5_3:54699988-54700007 Msa0818700:CDS 35.0%
CAGAATCTCATGCTGTATAT+CGG - chr5_3:54700134-54700153 None:intergenic 35.0%
TCTTAACAACACGGTAGATA+AGG - chr5_3:54700357-54700376 None:intergenic 35.0%
! CCTTTTCGTTCTTAACAACA+CGG - chr5_3:54700366-54700385 None:intergenic 35.0%
!! ATTTCGAGAAGTACTTTGGA+TGG + chr5_3:54700434-54700453 Msa0818700:CDS 35.0%
AAGTACTTTGGATGGCAAAA+AGG + chr5_3:54700442-54700461 Msa0818700:CDS 35.0%
CGGTTAGTACTAAAACTTCA+CGG - chr5_3:54700468-54700487 None:intergenic 35.0%
!! CGTGAAGTTTTAGTACTAAC+CGG + chr5_3:54700466-54700485 Msa0818700:CDS 35.0%
!! GTGAAGTTTTAGTACTAACC+GGG + chr5_3:54700467-54700486 Msa0818700:CDS 35.0%
!! TGAAGTTTTAGTACTAACCG+GGG + chr5_3:54700468-54700487 Msa0818700:CDS 35.0%
CTTTGAACGTGGGAAAATAA+TGG + chr5_3:54700501-54700520 Msa0818700:CDS 35.0%
AGCTGTCAAACTAATTCCTT+CGG - chr5_3:54700587-54700606 None:intergenic 35.0%
GGTTTATGTTTATCAGCTCT+TGG + chr5_3:54700699-54700718 Msa0818700:CDS 35.0%
! TATTCTAAGGGAAATGGTTG+AGG + chr5_3:54700849-54700868 Msa0818700:CDS 35.0%
GGTGAATATTCGCGGTTAAT+AGG - chr5_3:54694240-54694259 None:intergenic 40.0%
AGAGAAGAGAGAAGAAGATG+AGG - chr5_3:54694430-54694449 None:intergenic 40.0%
TATCAAAGGCAGTGTTGTGT+TGG - chr5_3:54694967-54694986 None:intergenic 40.0%
TTATCGATAAATGATCCGGC+CGG + chr5_3:54695408-54695427 Msa0818700:intron 40.0%
TATAAATACTCCCAGCTCCA+GGG - chr5_3:54695546-54695565 None:intergenic 40.0%
ATGTAAGCCTTGACTGTAAG+TGG + chr5_3:54695783-54695802 Msa0818700:intron 40.0%
CAAGCACTAGTGAAACTGTT+TGG + chr5_3:54696083-54696102 Msa0818700:intron 40.0%
TGCTTCAAATGCTGTTCAGA+AGG - chr5_3:54696436-54696455 None:intergenic 40.0%
! AAGCAGTTATCTTTGGCTCA+TGG + chr5_3:54696451-54696470 Msa0818700:CDS 40.0%
CACCATATGGTTATGGACAA+AGG + chr5_3:54696534-54696553 Msa0818700:CDS 40.0%
CACCTTTGTCCATAACCATA+TGG - chr5_3:54696539-54696558 None:intergenic 40.0%
! CAGACATTCGTTTAAGGTCA+AGG + chr5_3:54696565-54696584 Msa0818700:CDS 40.0%
!!! GTGTTCGATTTTTTGGAGGA+TGG - chr5_3:54697065-54697084 None:intergenic 40.0%
!!! GACTGTGTTCGATTTTTTGG+AGG - chr5_3:54697069-54697088 None:intergenic 40.0%
! TGGTAATGAAGAGCAATCCT+CGG - chr5_3:54697125-54697144 None:intergenic 40.0%
!! CCCAAAAGCAATTTGGTGTT+TGG - chr5_3:54697145-54697164 None:intergenic 40.0%
! TTGGATGTTTCTATCCTGAC+AGG - chr5_3:54697550-54697569 None:intergenic 40.0%
! ACAAGTCTTCTTCCCCTTTT+GGG - chr5_3:54697719-54697738 None:intergenic 40.0%
GGAAGAGGAATAATAGCAAG+TGG - chr5_3:54697772-54697791 None:intergenic 40.0%
ATTGGATCAGCATCTTGATC+AGG - chr5_3:54697793-54697812 None:intergenic 40.0%
GTTTGGATCGTAATGCTCAA+CGG - chr5_3:54697818-54697837 None:intergenic 40.0%
GTTGAGCATTACGATCCAAA+CGG + chr5_3:54697817-54697836 Msa0818700:CDS 40.0%
! AAGTTACAAAGGAAGAGCAC+AGG + chr5_3:54698015-54698034 Msa0818700:CDS 40.0%
CACAGGTAGTTTGGATGATA+TGG + chr5_3:54698032-54698051 Msa0818700:CDS 40.0%
GATCTTGGAAATAGATGGGA+AGG + chr5_3:54698054-54698073 Msa0818700:CDS 40.0%
ATCGAAGACAGGATTTCATG+AGG + chr5_3:54698089-54698108 Msa0818700:CDS 40.0%
TCGAAGACAGGATTTCATGA+GGG + chr5_3:54698090-54698109 Msa0818700:CDS 40.0%
ATAGGAGGTTCTTCTATGAC+AGG - chr5_3:54698243-54698262 None:intergenic 40.0%
TGTAACACAACAAACGGTGT+TGG + chr5_3:54698282-54698301 Msa0818700:CDS 40.0%
! AAACGGTGTTGGACAAAATG+TGG + chr5_3:54698293-54698312 Msa0818700:CDS 40.0%
ATCCTCTCCATGAGAAATCT+CGG - chr5_3:54698322-54698341 None:intergenic 40.0%
! GAAAGAACTTGAAGTGTCAC+TGG + chr5_3:54698374-54698393 Msa0818700:CDS 40.0%
! TTCTAAGTTTTCCTCAGGCT+CGG - chr5_3:54698536-54698555 None:intergenic 40.0%
GGAATATACTGCTGTAGATG+TGG + chr5_3:54698595-54698614 Msa0818700:CDS 40.0%
TCATCTTCATCATCCTTGGT+GGG - chr5_3:54699053-54699072 None:intergenic 40.0%
ATCATCTTCATCATCCTTGG+TGG - chr5_3:54699054-54699073 None:intergenic 40.0%
GTCATCATCTTCATCATCCT+TGG - chr5_3:54699057-54699076 None:intergenic 40.0%
TTCTCGTGATGAACCGATAT+CGG + chr5_3:54699100-54699119 Msa0818700:CDS 40.0%
GAAGCCGAATCCAAAAAAAG+AGG + chr5_3:54699245-54699264 Msa0818700:CDS 40.0%
!!! GCCACCTCTTTTTTTGGATT+CGG - chr5_3:54699252-54699271 None:intergenic 40.0%
TGTGTGATATCTCATACTCC+TGG + chr5_3:54699272-54699291 Msa0818700:CDS 40.0%
TAGCTACCTGAAGTTATTCC+CGG + chr5_3:54699331-54699350 Msa0818700:CDS 40.0%
!!! GTTTTTGGAGCAAGAACTAG+AGG - chr5_3:54699365-54699384 None:intergenic 40.0%
TGAATCAAGTACACCGGTAT+AGG - chr5_3:54699431-54699450 None:intergenic 40.0%
ATACCGGTGTACTTGATTCA+TGG + chr5_3:54699431-54699450 Msa0818700:CDS 40.0%
TTCATGGTCGTAGAACCTAT+AGG + chr5_3:54699447-54699466 Msa0818700:CDS 40.0%
TCATGGTCGTAGAACCTATA+GGG + chr5_3:54699448-54699467 Msa0818700:CDS 40.0%
ATTCTGCTTGAACACCCTAT+AGG - chr5_3:54699465-54699484 None:intergenic 40.0%
AATACAGTTGCTACTCTTCC+TGG + chr5_3:54699482-54699501 Msa0818700:CDS 40.0%
! CGATGATGTCAAGCATGTTT+TGG + chr5_3:54699520-54699539 Msa0818700:CDS 40.0%
GCCTTGAGAAGATCCAAAAA+TGG + chr5_3:54699546-54699565 Msa0818700:CDS 40.0%
!!! GCCATTTTTGGATCTTCTCA+AGG - chr5_3:54699550-54699569 None:intergenic 40.0%
!!! TCGGATGTGAATGCCATTTT+TGG - chr5_3:54699562-54699581 None:intergenic 40.0%
ACATCCGAGTGTTCTAATCA+TGG + chr5_3:54699574-54699593 Msa0818700:CDS 40.0%
CATCCGAGTGTTCTAATCAT+GGG + chr5_3:54699575-54699594 Msa0818700:CDS 40.0%
TAGCCCATGATTAGAACACT+CGG - chr5_3:54699581-54699600 None:intergenic 40.0%
GTTTGCACACCGAAAGTTTA+TGG + chr5_3:54699637-54699656 Msa0818700:CDS 40.0%
! AGTTTATGGCTCAAGTGTTG+AGG + chr5_3:54699651-54699670 Msa0818700:CDS 40.0%
!! GTTTATGGCTCAAGTGTTGA+GGG + chr5_3:54699652-54699671 Msa0818700:CDS 40.0%
!! ACCCTAGAAGTACCAAATCA+AGG + chr5_3:54699711-54699730 Msa0818700:CDS 40.0%
AACACTTCGTGAGGGAATTT+CGG - chr5_3:54699845-54699864 None:intergenic 40.0%
ATGCTTTCAACACTTCGTGA+GGG - chr5_3:54699853-54699872 None:intergenic 40.0%
AATGCTTTCAACACTTCGTG+AGG - chr5_3:54699854-54699873 None:intergenic 40.0%
AAGAGGAAAAGGAAAGGAGT+AGG + chr5_3:54699887-54699906 Msa0818700:CDS 40.0%
CGCAATATTTGATCGAGTCA+CGG + chr5_3:54699930-54699949 Msa0818700:CDS 40.0%
GCAATATTTGATCGAGTCAC+GGG + chr5_3:54699931-54699950 Msa0818700:CDS 40.0%
GTTGGAGAGGAAAGAATTCA+AGG + chr5_3:54700001-54700020 Msa0818700:CDS 40.0%
! TATGAAGCAGGAAGTTCTGA+TGG + chr5_3:54700067-54700086 Msa0818700:CDS 40.0%
! TCAAAAGCTCTAACTCGAGA+GGG - chr5_3:54700195-54700214 None:intergenic 40.0%
! ATCAAAAGCTCTAACTCGAG+AGG - chr5_3:54700196-54700215 None:intergenic 40.0%
CACTTGGATCAATACATCCT+TGG + chr5_3:54700218-54700237 Msa0818700:CDS 40.0%
! CCGTGTTGTTAAGAACGAAA+AGG + chr5_3:54700363-54700382 Msa0818700:CDS 40.0%
ATGGATAAATTTGAGGAGCC+TGG + chr5_3:54700520-54700539 Msa0818700:CDS 40.0%
AGTATCTTTGATACTCCACC+AGG - chr5_3:54700541-54700560 None:intergenic 40.0%
!!! TAGCTTGCTTCGTTTTCGAA+GGG - chr5_3:54700645-54700664 None:intergenic 40.0%
!!! ATAGCTTGCTTCGTTTTCGA+AGG - chr5_3:54700646-54700665 None:intergenic 40.0%
! TAAACCATTTTCTGCTGACC+AGG - chr5_3:54700685-54700704 None:intergenic 40.0%
!! ATAAGTACCGAAGAACCACT+TGG + chr5_3:54700743-54700762 Msa0818700:CDS 40.0%
ACTCTTTCCAAGTGGTTCTT+CGG - chr5_3:54700753-54700772 None:intergenic 40.0%
AAGAACCACTTGGAAAGAGT+GGG + chr5_3:54700753-54700772 Msa0818700:CDS 40.0%
ATATTCGCGGTTAATAGGGG+AGG - chr5_3:54694235-54694254 None:intergenic 45.0%
! GTAGTGGTGGTGAATATTCG+CGG - chr5_3:54694248-54694267 None:intergenic 45.0%
ATGCAACTGCACGAACTTCA+AGG + chr5_3:54694286-54694305 Msa0818700:five_prime_UTR 45.0%
GGTGAATTAGGTCCCAATGA+CGG + chr5_3:54695064-54695083 Msa0818700:intron 45.0%
GTCCCAATGACGGCAAAAAA+CGG + chr5_3:54695074-54695093 Msa0818700:intron 45.0%
GTATAAATACTCCCAGCTCC+AGG - chr5_3:54695547-54695566 None:intergenic 45.0%
! ACTTTTGCCTACTTCTTCGG+CGG - chr5_3:54695637-54695656 None:intergenic 45.0%
!!! GCCACTTTTGCCTACTTCTT+CGG - chr5_3:54695640-54695659 None:intergenic 45.0%
AGCAACTTCAGCAGCTGATT+TGG - chr5_3:54695820-54695839 None:intergenic 45.0%
GAAACAGGAGCAATCTGACA+CGG - chr5_3:54696598-54696617 None:intergenic 45.0%
GATTCCAGGACGTAAGAAAC+AGG - chr5_3:54696613-54696632 None:intergenic 45.0%
!! TGAATCATTGGCTCGTTGAG+GGG - chr5_3:54696655-54696674 None:intergenic 45.0%
!! CTGAATCATTGGCTCGTTGA+GGG - chr5_3:54696656-54696675 None:intergenic 45.0%
!! ACTGAATCATTGGCTCGTTG+AGG - chr5_3:54696657-54696676 None:intergenic 45.0%
CAACGAGCCAATGATTCAGT+TGG + chr5_3:54696657-54696676 Msa0818700:CDS 45.0%
TCTATACAGAGAAAGCCCCA+TGG + chr5_3:54696926-54696945 Msa0818700:CDS 45.0%
CATGTGAAAATCAGCCCCAT+CGG + chr5_3:54697089-54697108 Msa0818700:CDS 45.0%
ATCGGATTCAAAACCGACGA+TGG + chr5_3:54697322-54697341 Msa0818700:CDS 45.0%
TGGCTGCGAAGTTAAAGAGT+TGG + chr5_3:54697498-54697517 Msa0818700:CDS 45.0%
! GACAGGTGGCATGTTTCTAA+AGG - chr5_3:54697533-54697552 None:intergenic 45.0%
TTAGAAACATGCCACCTGTC+AGG + chr5_3:54697533-54697552 Msa0818700:CDS 45.0%
! GATGTTTCTATCCTGACAGG+TGG - chr5_3:54697547-54697566 None:intergenic 45.0%
!! CATTTGATGGCACCCTTTTC+CGG - chr5_3:54697634-54697653 None:intergenic 45.0%
AGCTTCTGGTGTACAATAGG+AGG + chr5_3:54697686-54697705 Msa0818700:CDS 45.0%
GCTTCTGGTGTACAATAGGA+GGG + chr5_3:54697687-54697706 Msa0818700:CDS 45.0%
TAGGAGGGCTAAAACCCAAA+AGG + chr5_3:54697702-54697721 Msa0818700:CDS 45.0%
AGGAGGGCTAAAACCCAAAA+GGG + chr5_3:54697703-54697722 Msa0818700:CDS 45.0%
! CACAAGTCTTCTTCCCCTTT+TGG - chr5_3:54697720-54697739 None:intergenic 45.0%
CAAAAGGGGAAGAAGACTTG+TGG + chr5_3:54697718-54697737 Msa0818700:CDS 45.0%
!! TTGTGGCGGTGTTGATCAAA+AGG + chr5_3:54697735-54697754 Msa0818700:CDS 45.0%
TCAGCATCTTGATCAGGAAG+AGG - chr5_3:54697787-54697806 None:intergenic 45.0%
TCGTAATGCTCAACGGCTAT+TGG - chr5_3:54697811-54697830 None:intergenic 45.0%
!! TCAGCATCATCTGCTTTTGC+AGG - chr5_3:54697949-54697968 None:intergenic 45.0%
! AAGGAAGAGCACAGGTAGTT+TGG + chr5_3:54698023-54698042 Msa0818700:CDS 45.0%
TTCTTCCACTGGTCAGTGAT+AGG - chr5_3:54698261-54698280 None:intergenic 45.0%
GTGGAAACCGAGATTTCTCA+TGG + chr5_3:54698312-54698331 Msa0818700:CDS 45.0%
AACCGAGATTTCTCATGGAG+AGG + chr5_3:54698317-54698336 Msa0818700:CDS 45.0%
ACATTGCATCTAGATGGACG+AGG + chr5_3:54698757-54698776 Msa0818700:intron 45.0%
! GGCAGGTTGAAAATTCAGTG+TGG + chr5_3:54698985-54699004 Msa0818700:intron 45.0%
AGATAAAGAAGAGCCCACCA+AGG + chr5_3:54699037-54699056 Msa0818700:CDS 45.0%
!! AAGTGTCGGTCGGGAAAAAA+TGG - chr5_3:54699082-54699101 None:intergenic 45.0%
! CGGAAGAAAACCAAAGCGTT+TGG + chr5_3:54699120-54699139 Msa0818700:CDS 45.0%
TTTCTTTGGCGAAACGTTGC+AGG + chr5_3:54699200-54699219 Msa0818700:CDS 45.0%
TTCTTTGGCGAAACGTTGCA+GGG + chr5_3:54699201-54699220 Msa0818700:CDS 45.0%
TTGCAGGGTCTACAAATCCA+GGG + chr5_3:54699216-54699235 Msa0818700:CDS 45.0%
GCCGAATCCAAAAAAAGAGG+TGG + chr5_3:54699248-54699267 Msa0818700:CDS 45.0%
!!! CACACAGCCACCTCTTTTTT+TGG - chr5_3:54699258-54699277 None:intergenic 45.0%
ATATCTCATACTCCTGGAGC+CGG + chr5_3:54699278-54699297 Msa0818700:CDS 45.0%
! AGAAAAGTTTTTCCGGCTCC+AGG - chr5_3:54699293-54699312 None:intergenic 45.0%
AGCTACCTGAAGTTATTCCC+GGG + chr5_3:54699332-54699351 Msa0818700:CDS 45.0%
CAAGTGGGAGATTCCTATAC+CGG + chr5_3:54699415-54699434 Msa0818700:CDS 45.0%
CGACCATGAATCAAGTACAC+CGG - chr5_3:54699437-54699456 None:intergenic 45.0%
TTGACATCATCGGTAGGCTT+GGG - chr5_3:54699512-54699531 None:intergenic 45.0%
ACATGCTTGACATCATCGGT+AGG - chr5_3:54699518-54699537 None:intergenic 45.0%
TCATCAAGTACCAAGAGTCC+AGG - chr5_3:54699683-54699702 None:intergenic 45.0%
GGACTCTTGGTACTTGATGA+AGG + chr5_3:54699683-54699702 Msa0818700:CDS 45.0%
AGGAAAGGAGTAGGCCAAAA+AGG + chr5_3:54699896-54699915 Msa0818700:CDS 45.0%
AGGCCAAAAAGGAGCAGAAA+AGG + chr5_3:54699907-54699926 Msa0818700:CDS 45.0%
! GGAAGTTCTGATGGTTTACC+AGG + chr5_3:54700076-54700095 Msa0818700:CDS 45.0%
AGCGACATGTTTAAGTGCAG+TGG + chr5_3:54700166-54700185 Msa0818700:CDS 45.0%
TGGATCAATACATCCTTGGC+TGG + chr5_3:54700222-54700241 Msa0818700:CDS 45.0%
AACTCGAGCTCTTTGAACGT+GGG + chr5_3:54700491-54700510 Msa0818700:CDS 45.0%
GATAAATTTGAGGAGCCTGG+TGG + chr5_3:54700523-54700542 Msa0818700:CDS 45.0%
TGCATCTCGTGTGATCATGT+TGG + chr5_3:54700606-54700625 Msa0818700:CDS 45.0%
TGATCATGTTGGATTCCGAG+TGG + chr5_3:54700617-54700636 Msa0818700:CDS 45.0%
! GTTTATCAGCTCTTGGTGAC+AGG + chr5_3:54700706-54700725 Msa0818700:CDS 45.0%
GAAGAACCACTTGGAAAGAG+TGG + chr5_3:54700752-54700771 Msa0818700:CDS 45.0%
! GTCGAGCATGATTTTCAGTG+AGG + chr5_3:54700777-54700796 Msa0818700:CDS 45.0%
TCTAAGGGAAATGGTTGAGG+AGG + chr5_3:54700852-54700871 Msa0818700:CDS 45.0%
!!! ATTTTTTTCTTTTTAATTAT+AGG + chr5_3:54696880-54696899 Msa0818700:intron 5.0%
AGAGAGAGAGAGAGTAGTGG+TGG - chr5_3:54694261-54694280 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGTAG+TGG - chr5_3:54694264-54694283 None:intergenic 50.0%
!!! GGCCGTTTTTTGCCGTCATT+GGG - chr5_3:54695079-54695098 None:intergenic 50.0%
!!! AGGCCGTTTTTTGCCGTCAT+TGG - chr5_3:54695080-54695099 None:intergenic 50.0%
GACGGCAAAAAACGGCCTTA+AGG + chr5_3:54695082-54695101 Msa0818700:intron 50.0%
CCACTAAAGCCCTCGCTTTA+GGG + chr5_3:54695444-54695463 Msa0818700:intron 50.0%
GTTGGTACACCCTAAAGCGA+GGG - chr5_3:54695456-54695475 None:intergenic 50.0%
TGTTGGTACACCCTAAAGCG+AGG - chr5_3:54695457-54695476 None:intergenic 50.0%
GAAGATTATTGGGCCGGAAC+AGG + chr5_3:54695519-54695538 Msa0818700:intron 50.0%
GCCGAAGAAGTAGGCAAAAG+TGG + chr5_3:54695636-54695655 Msa0818700:intron 50.0%
! TGCTCCTGTTTCTTACGTCC+TGG + chr5_3:54696606-54696625 Msa0818700:CDS 50.0%
!! GAATCATTGGCTCGTTGAGG+GGG - chr5_3:54696654-54696673 None:intergenic 50.0%
!! TTCCCTGAGAGTGTCGTGTT+TGG + chr5_3:54696738-54696757 Msa0818700:intron 50.0%
CACCAAACACGACACTCTCA+GGG - chr5_3:54696743-54696762 None:intergenic 50.0%
ACACCAAACACGACACTCTC+AGG - chr5_3:54696744-54696763 None:intergenic 50.0%
!! CGATGGGGCTGATTTTCACA+TGG - chr5_3:54697091-54697110 None:intergenic 50.0%
CGGTACTAACATGCCATCGT+CGG - chr5_3:54697338-54697357 None:intergenic 50.0%
ACGTGCATGATCAGCTCTCT+TGG - chr5_3:54697389-54697408 None:intergenic 50.0%
! GGGTGCCATCAAATGTCAGA+AGG + chr5_3:54697639-54697658 Msa0818700:CDS 50.0%
!! GCTGGCCTTCTGACATTTGA+TGG - chr5_3:54697647-54697666 None:intergenic 50.0%
CCAGCAAACCGAATGCTTGT+CGG + chr5_3:54697662-54697681 Msa0818700:CDS 50.0%
CAGCAAACCGAATGCTTGTC+GGG + chr5_3:54697663-54697682 Msa0818700:CDS 50.0%
AGAAGCTCCCGACAAGCATT+CGG - chr5_3:54697673-54697692 None:intergenic 50.0%
GGGAGCTTCTGGTGTACAAT+AGG + chr5_3:54697683-54697702 Msa0818700:CDS 50.0%
GGAGGGCTAAAACCCAAAAG+GGG + chr5_3:54697704-54697723 Msa0818700:CDS 50.0%
AAGGGGAAGAAGACTTGTGG+CGG + chr5_3:54697721-54697740 Msa0818700:CDS 50.0%
CTTCTAGCAACGTTGCCGTT+TGG - chr5_3:54697835-54697854 None:intergenic 50.0%
AACCTCCTATCACTGACCAG+TGG + chr5_3:54698253-54698272 Msa0818700:CDS 50.0%
TTCCACTGGTCAGTGATAGG+AGG - chr5_3:54698258-54698277 None:intergenic 50.0%
!!! AATTGTTTTGGCCGAGCCTG+AGG + chr5_3:54698522-54698541 Msa0818700:CDS 50.0%
AAATTCAGTGTGGCGCCAAG+AGG + chr5_3:54698995-54699014 Msa0818700:CDS 50.0%
CATCACACTGCTTCTCCTCT+TGG - chr5_3:54699013-54699032 None:intergenic 50.0%
CAAGAGGAGAAGCAGTGTGA+TGG + chr5_3:54699011-54699030 Msa0818700:CDS 50.0%
!! TCATCACGAGAAGTGTCGGT+CGG - chr5_3:54699092-54699111 None:intergenic 50.0%
! CGGTTCATCACGAGAAGTGT+CGG - chr5_3:54699096-54699115 None:intergenic 50.0%
GTTGCAGGGTCTACAAATCC+AGG + chr5_3:54699215-54699234 Msa0818700:CDS 50.0%
GATTCGGCTTCAATTAGCCC+TGG - chr5_3:54699236-54699255 None:intergenic 50.0%
GCTACCTGAAGTTATTCCCG+GGG + chr5_3:54699333-54699352 Msa0818700:CDS 50.0%
TCTTCCCCGGGAATAACTTC+AGG - chr5_3:54699340-54699359 None:intergenic 50.0%
AGAACTAGAGGTCTCTTCCC+CGG - chr5_3:54699353-54699372 None:intergenic 50.0%
CTTGACATCATCGGTAGGCT+TGG - chr5_3:54699513-54699532 None:intergenic 50.0%
!! CAAGTGTTGAGGGAAAGTCC+TGG + chr5_3:54699662-54699681 Msa0818700:CDS 50.0%
! GCGCCTTTTCTGCTCCTTTT+TGG - chr5_3:54699913-54699932 None:intergenic 50.0%
! TCCTTGGCTGGTCAAAACTG+CGG + chr5_3:54700234-54700253 Msa0818700:CDS 50.0%
TTCAAAGAGCTCGAGTTCCC+CGG - chr5_3:54700488-54700507 None:intergenic 50.0%
GAACTCGAGCTCTTTGAACG+TGG + chr5_3:54700490-54700509 Msa0818700:CDS 50.0%
TCAATCACAGCTTGTGCCGA+AGG + chr5_3:54700568-54700587 Msa0818700:CDS 50.0%
! CGTTTTCGAAGGGTTCCACT+CGG - chr5_3:54700635-54700654 None:intergenic 50.0%
TCGTCCTGGTCAGCAGAAAA+TGG + chr5_3:54700678-54700697 Msa0818700:CDS 50.0%
! TTTCAGTGAGGCGTTTGTCG+AGG + chr5_3:54700789-54700808 Msa0818700:CDS 50.0%
TTGTCGAGGATCCTTCTCGT+TGG + chr5_3:54700803-54700822 Msa0818700:CDS 50.0%
TTCTCAGCTTGCCAACGAGA+AGG - chr5_3:54700817-54700836 None:intergenic 50.0%
TAAATGATCCGGCCGGTCCA+AGG + chr5_3:54695415-54695434 Msa0818700:intron 55.0%
AAATGATCCGGCCGGTCCAA+GGG + chr5_3:54695416-54695435 Msa0818700:intron 55.0%
! TAGTGGCCTTACCCTTGGAC+CGG - chr5_3:54695430-54695449 None:intergenic 55.0%
! GGCTTTAGTGGCCTTACCCT+TGG - chr5_3:54695435-54695454 None:intergenic 55.0%
GCCACTAAAGCCCTCGCTTT+AGG + chr5_3:54695443-54695462 Msa0818700:intron 55.0%
! CCCTAAAGCGAGGGCTTTAG+TGG - chr5_3:54695447-54695466 None:intergenic 55.0%
! CTTTGGCTCATGGCATCCTG+TGG + chr5_3:54696461-54696480 Msa0818700:CDS 55.0%
!! AGCACGCATACGTCGATTCC+AGG - chr5_3:54696627-54696646 None:intergenic 55.0%
ACACGAGCACTCTGAGCCAT+GGG - chr5_3:54696945-54696964 None:intergenic 55.0%
GTGAAAATCAGCCCCATCGG+TGG + chr5_3:54697092-54697111 Msa0818700:CDS 55.0%
TCGGATGAAGACCACCGATG+GGG - chr5_3:54697106-54697125 None:intergenic 55.0%
CTCGGATGAAGACCACCGAT+GGG - chr5_3:54697107-54697126 None:intergenic 55.0%
GCTTACGACGTTCCAAACGC+AGG + chr5_3:54697452-54697471 Msa0818700:CDS 55.0%
TGGCTGTACATGCCTGCGTT+TGG - chr5_3:54697467-54697486 None:intergenic 55.0%
! GTACAGCCAGAGCGTTACGT+TGG + chr5_3:54697478-54697497 Msa0818700:CDS 55.0%
! CCGACAAGCATTCGGTTTGC+TGG - chr5_3:54697665-54697684 None:intergenic 55.0%
GAATGCTTGTCGGGAGCTTC+TGG + chr5_3:54697672-54697691 Msa0818700:CDS 55.0%
!! CATCACGAGAAGTGTCGGTC+GGG - chr5_3:54699091-54699110 None:intergenic 55.0%
GAACTAGAGGTCTCTTCCCC+GGG - chr5_3:54699352-54699371 None:intergenic 55.0%
GAGGGAAAGTCCTGGACTCT+TGG + chr5_3:54699670-54699689 Msa0818700:CDS 55.0%
!! ACCGCAGTTTTGACCAGCCA+AGG - chr5_3:54700238-54700257 None:intergenic 55.0%
AGCGAACAGGCGCAATGTTG+TGG - chr5_3:54700402-54700421 None:intergenic 55.0%
ATTGCACGTGCGTTTCGTCC+TGG + chr5_3:54700664-54700683 Msa0818700:CDS 55.0%
! GCTCTTGGTGACAGGTTCGT+TGG + chr5_3:54700714-54700733 Msa0818700:CDS 55.0%
! CTTGGTGACAGGTTCGTTGG+AGG + chr5_3:54700717-54700736 Msa0818700:CDS 55.0%
CGACACCCACTCTTTCCAAG+TGG - chr5_3:54700761-54700780 None:intergenic 55.0%
TGCACTGCCGCCGAAGAAGT+AGG + chr5_3:54695627-54695646 Msa0818700:intron 60.0%
CACGAGCACTCTGAGCCATG+GGG - chr5_3:54696944-54696963 None:intergenic 60.0%
GACACGAGCACTCTGAGCCA+TGG - chr5_3:54696946-54696965 None:intergenic 60.0%
CCTCGGATGAAGACCACCGA+TGG - chr5_3:54697108-54697127 None:intergenic 60.0%
CCATCGGTGGTCTTCATCCG+AGG + chr5_3:54697105-54697124 Msa0818700:CDS 60.0%
TCGCAGCCAACGTAACGCTC+TGG - chr5_3:54697487-54697506 None:intergenic 60.0%
! CCCTTTTCCGGACTGCTCTG+CGG - chr5_3:54697622-54697641 None:intergenic 60.0%
CCGCAGAGCAGTCCGGAAAA+GGG + chr5_3:54697619-54697638 Msa0818700:CDS 60.0%
CGCACGCGTGCACTCTTATG+TGG + chr5_3:54698691-54698710 Msa0818700:intron 60.0%
TCGGTAGGCTTGGGAACTCC+AGG - chr5_3:54699503-54699522 None:intergenic 60.0%
ATCCGGCCGGTCCAAGGGTA+AGG + chr5_3:54695421-54695440 Msa0818700:intron 65.0%
ATTGGGCCGGAACAGGTCCC+TGG + chr5_3:54695526-54695545 Msa0818700:intron 65.0%
CCAGCTCCAGGGACCTGTTC+CGG - chr5_3:54695535-54695554 None:intergenic 65.0%
CGGAACAGGTCCCTGGAGCT+GGG + chr5_3:54695533-54695552 Msa0818700:intron 65.0%
CCGGACTGCTCTGCGGCAAA+CGG - chr5_3:54697615-54697634 None:intergenic 65.0%
CCGTTTGCCGCAGAGCAGTC+CGG + chr5_3:54697612-54697631 Msa0818700:CDS 65.0%
GCCGCAGAGCAGTCCGGAAA+AGG + chr5_3:54697618-54697637 Msa0818700:CDS 65.0%
GGCCTTACCCTTGGACCGGC+CGG - chr5_3:54695426-54695445 None:intergenic 70.0%
CCGGAACAGGTCCCTGGAGC+TGG + chr5_3:54695532-54695551 Msa0818700:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 54694199 54700933 54694199 ID=Msa0818700;Name=Msa0818700
chr5_3 mRNA 54694199 54700933 54694199 ID=Msa0818700-mRNA-1;Parent=Msa0818700;Name=Msa0818700-mRNA-1;_AED=0.03;_eAED=0.03;_QI=375|1|0.83|1|0.8|0.66|6|0|1305
chr5_3 exon 54694199 54694532 54694199 ID=Msa0818700-mRNA-1:exon:16590;Parent=Msa0818700-mRNA-1
chr5_3 exon 54695826 54695921 54695826 ID=Msa0818700-mRNA-1:exon:16591;Parent=Msa0818700-mRNA-1
chr5_3 exon 54696445 54696695 54696445 ID=Msa0818700-mRNA-1:exon:16592;Parent=Msa0818700-mRNA-1
chr5_3 exon 54696902 54698422 54696902 ID=Msa0818700-mRNA-1:exon:16593;Parent=Msa0818700-mRNA-1
chr5_3 exon 54698511 54698657 54698511 ID=Msa0818700-mRNA-1:exon:16594;Parent=Msa0818700-mRNA-1
chr5_3 exon 54698990 54700933 54698990 ID=Msa0818700-mRNA-1:exon:16595;Parent=Msa0818700-mRNA-1
chr5_3 five_prime_UTR 54694199 54694532 54694199 ID=Msa0818700-mRNA-1:five_prime_utr;Parent=Msa0818700-mRNA-1
chr5_3 five_prime_UTR 54695826 54695866 54695826 ID=Msa0818700-mRNA-1:five_prime_utr;Parent=Msa0818700-mRNA-1
chr5_3 CDS 54695867 54695921 54695867 ID=Msa0818700-mRNA-1:cds;Parent=Msa0818700-mRNA-1
chr5_3 CDS 54696445 54696695 54696445 ID=Msa0818700-mRNA-1:cds;Parent=Msa0818700-mRNA-1
chr5_3 CDS 54696902 54698422 54696902 ID=Msa0818700-mRNA-1:cds;Parent=Msa0818700-mRNA-1
chr5_3 CDS 54698511 54698657 54698511 ID=Msa0818700-mRNA-1:cds;Parent=Msa0818700-mRNA-1
chr5_3 CDS 54698990 54700933 54698990 ID=Msa0818700-mRNA-1:cds;Parent=Msa0818700-mRNA-1
Gene Sequence

>Msa0818700

ATGATGAACAGAAAGAGGCGTCTAAATGAATCAAAGAATTCATTCAATTCTGACCCATTTGAAGCAGTTATCTTTGGCTCATGGCATCCTGTGGAGTTCATAAAAGTTAAATCAGGATCTATGAGCATACATTTCACAGATAATCACCATATGGTTATGGACAAAGGTGCTTTATCAGACATTCGTTTAAGGTCAAGGAAAGCTACCGTGTCAGATTGCTCCTGTTTCTTACGTCCTGGAATCGACGTATGCGTGCTATCACCCCCTCAACGAGCCAATGATTCAGTTGGTTTAAATCTCGAGCCTGTTTGGGCTGATGCTAGAATAAGTTCTATACAGAGAAAGCCCCATGGCTCAGAGTGCTCGTGTCAGTTTTTCGTCAACTTCTATATTGAACAAGGTTCACTTGGTTTAGAAATGAGAACTCTTTGTAAGGATGTCAAAGTATTCGGACTCAATCAGATCTCCATCCTCCAAAAAATCGAACACAGTCCATGTGAAAATCAGCCCCATCGGTGGTCTTCATCCGAGGATTGCTCTTCATTACCAAACACCAAATTGCTTTTGGGAAAGTTCTTAATCGATCTTTCATGGTTAGTTGTTACATCGGTTGTCAAGAATGTTTCGTTCTGTGCAAGATCAGTAGAAAACAAGATGGTGTATCAAATTTTGGGAGGTGATAGTAGTAATAGCTCATCGTCGAACACCGAGTCTCATATTGATGTCATCGGATTCAAAACCGACGATGGCATGTTAGTACCGATTGTTTCTCAAGTTGCTATAACTAACACCAAGAGAGCTGATCATGCACGTGAATCGCGTGCAGATGAAGCGTCATCATCTTATAATGTTGACGGCTTACGACGTTCCAAACGCAGGCATGTACAGCCAGAGCGTTACGTTGGCTGCGAAGTTAAAGAGTTGGATGTTGGTACCTTTAGAAACATGCCACCTGTCAGGATAGAAACATCCAAAGCAGTAGTAGATGAAATGTCGTTGCCGTTATCATTCTTGTTCCGTTTGCCGCAGAGCAGTCCGGAAAAGGGTGCCATCAAATGTCAGAAGGCCAGCAAACCGAATGCTTGTCGGGAGCTTCTGGTGTACAATAGGAGGGCTAAAACCCAAAAGGGGAAGAAGACTTGTGGCGGTGTTGATCAAAAGGAACATAAAAATCCACTTGCTATTATTCCTCTTCCTGATCAAGATGCTGATCCAATAGCCGTTGAGCATTACGATCCAAACGGCAACGTTGCTAGAAGTCATGAACATCAATCACGTGATATTACTTCGCAGTATAGTCATTTGGTTAATAATCCTAAACCAAGGAAAAACATCAATTTGTTAGATGATCCTGCAAAAGCAGATGATGCTGAGAAGAACGACCATGTTTCTTCACGATGTCAATTTTTTGGCTCTACTAAGTTACAAAGGAAGAGCACAGGTAGTTTGGATGATATGGATCTTGGAAATAGATGGGAAGGAATAAAAAGAAAATCGAAGACAGGATTTCATGAGGGAACATATCGCTCAACTCATTTAAGAAATAACGGCGAAGGAAGAAGTCACAATTATAAAGACAGAACTTTAAATGCGGCCGCATACAAGAGTTTGATCCATTCGTATTTACAGAATATTAATACAATACCTGTCATAGAAGAACCTCCTATCACTGACCAGTGGAAGAAATGTAACACAACAAACGGTGTTGGACAAAATGTGGAAACCGAGATTTCTCATGGAGAGGATGATGTAGAAAAAGCTGAAATGGATATGTTGTGGAAAGAACTTGAAGTGTCACTGGCGTCGAGTTATTTTGATGACTCAGAGGTTTCAAATGCAATTGTTTTGGCCGAGCCTGAGGAAAACTTAGAAGAAGTTTGTGAACATGATAATAGATTGGATGAAGAAATTGGAATATACTGCTGTAGATGTGGCTTTGTGACCACCCATATCAGAGATGTTAATCCAATTTTTGTTGAAAATTCAGTGTGGCGCCAAGAGGAGAAGCAGTGTGATGGAGAAGATAAAGAAGAGCCCACCAAGGATGATGAAGATGATGACTTCCATTTTTTCCCGACCGACACTTCTCGTGATGAACCGATATCGGAAGAAAACCAAAGCGTTTGGTCATTAATTCCTGAACTCAGAGAAAAATTGCATGTGCACCAAAAGAAAGCTTTTGAGTTTCTTTGGCGAAACGTTGCAGGGTCTACAAATCCAGGGCTAATTGAAGCCGAATCCAAAAAAAGAGGTGGCTGTGTGATATCTCATACTCCTGGAGCCGGAAAAACTTTTCTCATCATCGCTTTTCTTGTTAGCTACCTGAAGTTATTCCCGGGGAAGAGACCTCTAGTTCTTGCTCCAAAAACTACGCTCTATACTTGGTATAAAGAATTTATCAAGTGGGAGATTCCTATACCGGTGTACTTGATTCATGGTCGTAGAACCTATAGGGTGTTCAAGCAGAATACAGTTGCTACTCTTCCTGGAGTTCCCAAGCCTACCGATGATGTCAAGCATGTTTTGGATTGCCTTGAGAAGATCCAAAAATGGCATTCACATCCGAGTGTTCTAATCATGGGCTACACTTCGTTTTTAACATTGATGCGAGAGGATTCAAAGTTTGCACACCGAAAGTTTATGGCTCAAGTGTTGAGGGAAAGTCCTGGACTCTTGGTACTTGATGAAGGTCACAACCCTAGAAGTACCAAATCAAGGTTGCGAAAATGTTTGATGAAAGTGCAAACCGAATTGAGAATATTGCTTTCCGGTACTTTGTTTCAAAATAATTTCTGCGAATACTTCAACACTCTATGCTTGGCAAGACCGAAATTCCCTCACGAAGTGTTGAAAGCATTAGACCCTAAATACAAGAGGAAAAGGAAAGGAGTAGGCCAAAAAGGAGCAGAAAAGGCGCAATATTTGATCGAGTCACGGGCAAGAAAATTCTTCTTAGATACAATCGCTAGGAAAATTGACTCTAATGTTGGAGAGGAAAGAATTCAAGGATTAAACATGTTGAGAAATGTGACAAATGGTTTTATCGATGTTTATGAAGCAGGAAGTTCTGATGGTTTACCAGGTTTACAAATTTATACACTGCTAATGAATACAACCGATATACAGCATGAGATTCTGCAGAAACTTCACAGCGACATGTTTAAGTGCAGTGGATACCCTCTCGAGTTAGAGCTTTTGATAACACTTGGATCAATACATCCTTGGCTGGTCAAAACTGCGGTGTGTTCTCAGAAATTTTTAACAAAGGAGCAATTGAGTGATCTTGATAAGTACAAGTTTGATTTGAAAATAGGTTCAAAAGTAAGATTTGTTTTGAGCCTTATCTACCGTGTTGTTAAGAACGAAAAGGTTCTTATCTTTTGCCACAACATTGCGCCTGTTCGCTTATTTCAAGAATATTTCGAGAAGTACTTTGGATGGCAAAAAGGCCGTGAAGTTTTAGTACTAACCGGGGAACTCGAGCTCTTTGAACGTGGGAAAATAATGGATAAATTTGAGGAGCCTGGTGGAGTATCAAAGATACTACTTGCTTCAATCACAGCTTGTGCCGAAGGAATTAGTTTGACAGCTGCATCTCGTGTGATCATGTTGGATTCCGAGTGGAACCCTTCGAAAACGAAGCAAGCTATTGCACGTGCGTTTCGTCCTGGTCAGCAGAAAATGGTTTATGTTTATCAGCTCTTGGTGACAGGTTCGTTGGAGGAAGATAAGTACCGAAGAACCACTTGGAAAGAGTGGGTGTCGAGCATGATTTTCAGTGAGGCGTTTGTCGAGGATCCTTCTCGTTGGCAAGCTGAGAAGATTGAAGATGATATTCTAAGGGAAATGGTTGAGGAGGATAAGTCTAAATCATTCCATATGATCATGAAGAATGAAAAGGCTTCAACAAAAACATAA
Protein sequence

>Msa0818700

MMNRKRRLNESKNSFNSDPFEAVIFGSWHPVEFIKVKSGSMSIHFTDNHHMVMDKGALSDIRLRSRKATVSDCSCFLRPGIDVCVLSPPQRANDSVGLNLEPVWADARISSIQRKPHGSECSCQFFVNFYIEQGSLGLEMRTLCKDVKVFGLNQISILQKIEHSPCENQPHRWSSSEDCSSLPNTKLLLGKFLIDLSWLVVTSVVKNVSFCARSVENKMVYQILGGDSSNSSSSNTESHIDVIGFKTDDGMLVPIVSQVAITNTKRADHARESRADEASSSYNVDGLRRSKRRHVQPERYVGCEVKELDVGTFRNMPPVRIETSKAVVDEMSLPLSFLFRLPQSSPEKGAIKCQKASKPNACRELLVYNRRAKTQKGKKTCGGVDQKEHKNPLAIIPLPDQDADPIAVEHYDPNGNVARSHEHQSRDITSQYSHLVNNPKPRKNINLLDDPAKADDAEKNDHVSSRCQFFGSTKLQRKSTGSLDDMDLGNRWEGIKRKSKTGFHEGTYRSTHLRNNGEGRSHNYKDRTLNAAAYKSLIHSYLQNINTIPVIEEPPITDQWKKCNTTNGVGQNVETEISHGEDDVEKAEMDMLWKELEVSLASSYFDDSEVSNAIVLAEPEENLEEVCEHDNRLDEEIGIYCCRCGFVTTHIRDVNPIFVENSVWRQEEKQCDGEDKEEPTKDDEDDDFHFFPTDTSRDEPISEENQSVWSLIPELREKLHVHQKKAFEFLWRNVAGSTNPGLIEAESKKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRVFKQNTVATLPGVPKPTDDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKFMAQVLRESPGLLVLDEGHNPRSTKSRLRKCLMKVQTELRILLSGTLFQNNFCEYFNTLCLARPKFPHEVLKALDPKYKRKRKGVGQKGAEKAQYLIESRARKFFLDTIARKIDSNVGEERIQGLNMLRNVTNGFIDVYEAGSSDGLPGLQIYTLLMNTTDIQHEILQKLHSDMFKCSGYPLELELLITLGSIHPWLVKTAVCSQKFLTKEQLSDLDKYKFDLKIGSKVRFVLSLIYRVVKNEKVLIFCHNIAPVRLFQEYFEKYFGWQKGREVLVLTGELELFERGKIMDKFEEPGGVSKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTGSLEEDKYRRTTWKEWVSSMIFSEAFVEDPSRWQAEKIEDDILREMVEEDKSKSFHMIMKNEKASTKT*