AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0394270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0394270 MtrunA17_Chr3g0079791 93.536 526 34 0 1 526 1 526 0.0 997
Msa0394270 MtrunA17_Chr3g0079801 93.346 526 35 0 1 526 1 526 0.0 993
Msa0394270 MtrunA17_Chr3g0079831 87.048 525 66 1 1 525 17 539 0.0 920
Msa0394270 MtrunA17_Chr2g0292971 53.033 511 229 6 19 522 23 529 0.0 571
Msa0394270 MtrunA17_Chr4g0051211 57.419 465 188 4 69 523 8 472 0.0 570
Msa0394270 MtrunA17_Chr4g0051421 55.075 532 222 7 3 520 7 535 0.0 568
Msa0394270 MtrunA17_Chr4g0051421 54.935 537 224 8 2 524 545 1077 0.0 556
Msa0394270 MtrunA17_Chr2g0292991 56.250 528 219 8 1 523 8 528 0.0 563
Msa0394270 MtrunA17_Chr2g0293021 55.703 526 217 8 1 519 8 524 0.0 561
Msa0394270 MtrunA17_Chr4g0051381 52.941 527 238 5 4 522 11 535 0.0 551
Msa0394270 MtrunA17_Chr4g0051541 55.512 508 213 8 23 522 28 530 0.0 548
Msa0394270 MtrunA17_Chr4g0051551 51.894 528 243 8 1 522 36 558 0.0 547
Msa0394270 MtrunA17_Chr2g0293121 49.427 524 257 5 4 522 3 523 0.0 541
Msa0394270 MtrunA17_Chr4g0051411 51.698 530 243 7 2 520 6 533 0.0 535
Msa0394270 MtrunA17_Chr4g0051441 48.936 564 242 7 2 524 58 616 0.0 528
Msa0394270 MtrunA17_Chr2g0293191 49.257 538 252 10 1 522 31 563 0.0 520
Msa0394270 MtrunA17_Chr2g0293161 49.156 533 255 9 1 522 5 532 0.0 519
Msa0394270 MtrunA17_Chr2g0293041 47.173 513 257 7 19 522 33 540 4.11e-166 481
Msa0394270 MtrunA17_Chr2g0293031 45.318 534 276 8 1 522 9 538 2.39e-165 479
Msa0394270 MtrunA17_Chr4g0051531 47.664 535 265 9 1 524 624 1154 1.44e-160 486
Msa0394270 MtrunA17_Chr4g0051531 46.731 520 263 8 11 520 23 538 4.84e-152 464
Msa0394270 MtrunA17_Chr4g0048361 46.958 526 265 7 1 520 7 524 3.43e-160 466
Msa0394270 MtrunA17_Chr4g0048311 48.527 509 247 9 24 522 37 540 4.61e-160 466
Msa0394270 MtrunA17_Chr4g0028611 45.785 522 276 4 1 520 33 549 2.00e-159 465
Msa0394270 MtrunA17_Chr6g0457031 46.565 524 262 8 7 520 9 524 7.52e-158 460
Msa0394270 MtrunA17_Chr6g0457061 46.756 524 261 8 7 520 9 524 1.94e-157 459
Msa0394270 MtrunA17_Chr4g0048351 46.490 527 260 8 7 520 22 539 2.60e-157 459
Msa0394270 MtrunA17_Chr4g0046581 47.173 513 251 7 24 524 31 535 5.61e-156 456
Msa0394270 MtrunA17_Chr3g0079821 88.793 232 26 0 295 526 1 232 2.49e-152 434
Msa0394270 MtrunA17_Chr2g0288611 46.739 460 237 5 70 524 12 468 1.76e-142 419
Msa0394270 MtrunA17_Chr1g0188271 44.211 475 254 7 54 519 60 532 6.76e-129 386
Msa0394270 MtrunA17_Chr4g0048331 44.828 406 204 7 119 520 2 391 6.46e-124 369
Msa0394270 MtrunA17_Chr2g0320381 76.812 69 12 1 164 232 48 112 1.59e-29 112
Msa0394270 MtrunA17_Chr2g0320371 88.889 45 5 0 122 166 1 45 5.92e-21 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0394270 AT4G20860.1 55.899 517 216 7 14 522 17 529 0.0 570
Msa0394270 AT5G44400.1 53.107 531 232 11 4 520 7 534 0.0 544
Msa0394270 AT5G44360.1 55.253 514 203 11 23 522 30 530 0.0 541
Msa0394270 AT5G44360.2 55.253 514 203 11 23 522 46 546 0.0 541
Msa0394270 AT2G34790.1 49.906 531 238 9 5 520 11 528 0.0 537
Msa0394270 AT5G44390.1 52.207 521 234 12 13 522 24 540 0.0 532
Msa0394270 AT1G30760.1 53.137 510 222 10 20 520 29 530 0.0 529
Msa0394270 AT1G30760.2 53.137 510 222 10 20 520 47 548 0.0 529
Msa0394270 AT5G44440.1 47.092 533 268 9 2 525 5 532 3.59e-168 487
Msa0394270 AT5G44440.2 47.092 533 268 9 2 525 75 602 3.31e-167 487
Msa0394270 AT5G44380.1 50.191 524 246 11 9 520 17 537 1.02e-166 483
Msa0394270 AT5G44380.2 50.191 524 246 11 9 520 57 577 3.14e-166 483
Msa0394270 AT4G20820.1 46.809 517 260 9 8 520 19 524 1.12e-165 480
Msa0394270 AT1G26420.1 47.637 529 258 8 1 520 5 523 2.41e-165 479
Msa0394270 AT1G26410.1 50.209 478 227 6 48 520 76 547 9.32e-162 471
Msa0394270 AT1G26380.1 46.981 530 264 7 2 522 4 525 5.51e-161 468
Msa0394270 AT5G44410.1 47.137 524 261 8 7 522 14 529 9.81e-161 468
Msa0394270 AT1G26390.1 49.269 479 232 6 48 520 52 525 1.47e-158 462
Msa0394270 AT1G26400.1 46.899 516 266 6 8 519 10 521 6.93e-157 457
Msa0394270 AT1G30710.1 44.972 527 277 8 4 524 11 530 7.09e-156 455
Msa0394270 AT1G34575.1 44.318 528 269 10 4 521 11 523 4.84e-155 453
Msa0394270 AT1G30700.1 47.337 507 253 8 24 522 26 526 4.34e-154 451
Msa0394270 AT1G30730.1 45.087 519 276 6 8 521 10 524 4.19e-151 443
Msa0394270 AT1G11770.1 42.315 527 296 7 4 526 11 533 8.29e-151 442
Msa0394270 AT1G01980.1 44.359 523 275 9 15 526 21 538 1.34e-150 442
Msa0394270 AT4G20800.1 48.069 466 234 5 60 520 61 523 6.30e-149 437
Msa0394270 AT4G20840.1 43.787 507 274 7 22 522 34 535 2.84e-148 436
Msa0394270 AT4G20830.2 44.423 511 275 7 19 524 32 538 1.61e-145 429
Msa0394270 AT1G30740.2 44.015 518 281 7 11 522 17 531 5.75e-145 427
Msa0394270 AT1G30740.1 44.015 518 281 7 11 522 14 528 6.35e-145 427
Msa0394270 AT4G20830.1 44.401 509 274 7 19 522 32 536 2.05e-144 427
Msa0394270 AT2G34810.1 43.133 517 284 6 15 522 24 539 2.98e-140 416
Msa0394270 AT1G30720.1 42.412 514 287 6 13 521 16 525 1.15e-139 414

Find 119 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCACTTATAATATTTATTT+TGG 0.156288 3_2:+8855868 Msa0394270:three_prime_UTR
TTGGGGCATCAAGTACTTTA+AGG 0.182488 3_2:+8855731 Msa0394270:CDS
CTTAATTAAGTTGTTAATTC+AGG 0.183749 3_2:-8855847 None:intergenic
AAGCTGGTTTAGAAGGTATT+TGG 0.194170 3_2:+8855397 Msa0394270:CDS
GCTCACCTTATAGATGTAAA+TGG 0.201621 3_2:+8854868 Msa0394270:CDS
AATGAGAGTTTCCCTGAATT+AGG 0.214946 3_2:+8855213 Msa0394270:CDS
CACATTAGCATTACTTATAA+TGG 0.248787 3_2:+8855440 Msa0394270:CDS
TTGTCTTGCAACCCTAATTC+AGG 0.255332 3_2:-8855225 None:intergenic
CATCCACTTTATATGCTTGT+TGG 0.273212 3_2:-8855583 None:intergenic
GGAGGTAGTGCTACTAGTTT+TGG 0.283804 3_2:+8854943 Msa0394270:CDS
CGATGAATTTGCTTGGATTC+AGG 0.286513 3_2:+8853412 Msa0394270:CDS
AAGTGGATGAGAATGCTTTA+TGG 0.287403 3_2:+8855597 Msa0394270:CDS
GAGCTGCATATTACAACTAT+AGG 0.298398 3_2:+8855652 Msa0394270:CDS
CTGCTTGAATTTCTGATTCA+TGG 0.298655 3_2:-8853247 None:intergenic
CTATTCAGCAAGAGTTCTAT+AGG 0.301114 3_2:-8855312 None:intergenic
CTTGATGAATTCACCCATCT+TGG 0.307956 3_2:-8853197 None:intergenic
AGAGAGAGTTAAACTTGGTT+TGG 0.351945 3_2:-8855155 None:intergenic
ATGAGAGTTTCCCTGAATTA+GGG 0.357011 3_2:+8855214 Msa0394270:CDS
TCTAAACCAGCTTCTGGTAT+AGG 0.365053 3_2:-8855387 None:intergenic
TCTAAAGCAAGTAAAGTTCA+TGG 0.367121 3_2:+8853470 Msa0394270:CDS
GGTACTCAGAAGCAAGTGTT+TGG 0.380263 3_2:+8855712 Msa0394270:CDS
ATTCAGGCTGGTGCAACATT+AGG 0.380469 3_2:+8853428 Msa0394270:CDS
GAGCAACCAAGCTTCTTAAT+AGG 0.382965 3_2:+8855049 Msa0394270:CDS
TTACTTATAATGGAACCTTA+TGG 0.388867 3_2:+8855450 Msa0394270:CDS
CACATCAGTGGTGGTGGCTT+TGG 0.390649 3_2:+8854799 Msa0394270:CDS
TTGTTCCAATGTTCTTTGAA+TGG 0.398919 3_2:-8855025 None:intergenic
TGGGGCATCAAGTACTTTAA+GGG 0.402731 3_2:+8855732 Msa0394270:CDS
CAACACTTGTGGATACAATA+AGG 0.404009 3_2:-8853156 None:intergenic
ATACCTTCTAAACCAGCTTC+TGG 0.406374 3_2:-8855393 None:intergenic
ATACCAGAAGCTGGTTTAGA+AGG 0.411336 3_2:+8855390 Msa0394270:CDS
CTTGGAGACTTTGAAACATA+AGG 0.412215 3_2:-8855630 None:intergenic
CTTGTACAACATACAATATA+TGG 0.415255 3_2:+8855530 Msa0394270:CDS
TCTCGCCCCGTGCTATCGCC+CGG 0.416260 3_2:+8855949 Msa0394270:three_prime_UTR
AGCTGCATATTACAACTATA+GGG 0.426482 3_2:+8855653 Msa0394270:CDS
GTACTCAGAAGCAAGTGTTT+GGG 0.433402 3_2:+8855713 Msa0394270:CDS
GATGAGATCAATCATGATAA+AGG 0.434881 3_2:-8853360 None:intergenic
TCATTCAGTCTTCCACCATA+AGG 0.436662 3_2:-8855465 None:intergenic
AAGTTTAACTCTCTCTTCCT+TGG 0.446047 3_2:+8855162 Msa0394270:CDS
ATAGACCCGGGCGATAGCAC+GGG 0.449110 3_2:-8855955 None:intergenic
ATCTTGCCGATGAATTTGCT+TGG 0.459055 3_2:+8853405 Msa0394270:CDS
TCATTCTTGCATGGAAGATA+AGG 0.459271 3_2:+8854968 Msa0394270:CDS
CTCACCTTATAGATGTAAAT+GGG 0.461407 3_2:+8854869 Msa0394270:CDS
AATTCTTGATAGAAAATCAA+TGG 0.470027 3_2:+8854894 Msa0394270:CDS
AGACTAGTATATGCAAGGTC+CGG 0.470162 3_2:-8855927 None:intergenic
GACTAGTATATGCAAGGTCC+GGG 0.470457 3_2:-8855926 None:intergenic
TAAGGGAAACTTTAAGCGAT+TGG 0.470910 3_2:+8855749 Msa0394270:CDS
AACTATAGGGATCTTGATAT+AGG 0.475447 3_2:+8855666 Msa0394270:CDS
TTAATTAAGTTGTTAATTCA+GGG 0.475592 3_2:-8855846 None:intergenic
TGTCTTGCAACCCTAATTCA+GGG 0.475992 3_2:-8855224 None:intergenic
CTTCATGCAATTTATCTGCT+AGG 0.476079 3_2:-8855080 None:intergenic
AAGACTGCATTGAAATGAGT+TGG 0.478707 3_2:+8855247 Msa0394270:CDS
ATGAGATCAATCATGATAAA+GGG 0.478729 3_2:-8853359 None:intergenic
TAAGTTGTTAATTCAGGGGA+GGG 0.480193 3_2:-8855841 None:intergenic
TATTCAGCAAGAGTTCTATA+GGG 0.484064 3_2:-8855311 None:intergenic
CATTGAAACAAAATCCAAGA+TGG 0.486669 3_2:+8853183 Msa0394270:CDS
TTCAGAAAAGCTACTACCTA+TGG 0.493468 3_2:-8853099 None:intergenic
TTCAATGATTCCAACACTTG+TGG 0.495973 3_2:-8853167 None:intergenic
TGGTGGTGGCTTTGGTACCT+TGG 0.497819 3_2:+8854807 Msa0394270:CDS
CTTATTGTATCCACAAGTGT+TGG 0.498395 3_2:+8853157 Msa0394270:CDS
TGCTTGAATTTCTGATTCAT+GGG 0.498893 3_2:-8853246 None:intergenic
AGAATAGTTGCTCAAAATAG+TGG 0.501050 3_2:+8855114 Msa0394270:CDS
AAGACAGTCCTTCATAATCA+TGG 0.503011 3_2:-8853322 None:intergenic
TAGTTGTAATATGCAGCTCT+TGG 0.503584 3_2:-8855648 None:intergenic
AATAGACCCGGGCGATAGCA+CGG 0.507685 3_2:-8855956 None:intergenic
AATCCAACAAGCATATAAAG+TGG 0.509234 3_2:+8855580 Msa0394270:CDS
GGTGGTCACATCAGTGGTGG+TGG 0.517807 3_2:+8854793 Msa0394270:CDS
GTGGCTTTGGTACCTTGGTA+AGG 0.520411 3_2:+8854812 Msa0394270:CDS
ATTCTTGATAGAAAATCAAT+GGG 0.522100 3_2:+8854895 Msa0394270:CDS
CTGCCACCTATTAAGAAGCT+TGG 0.525159 3_2:-8855055 None:intergenic
AATTTAAAGTCATTGATAGC+AGG 0.536227 3_2:-8856108 None:intergenic
TGACCACCTACTCCAACACT+TGG 0.537412 3_2:-8854778 None:intergenic
AAAGTTCATGGATTCCCTGC+AGG 0.538278 3_2:+8853482 Msa0394270:CDS
CTCGCCCCGTGCTATCGCCC+GGG 0.542218 3_2:+8855950 Msa0394270:three_prime_UTR
TCTTGCATGGAAGATAAGGT+TGG 0.542256 3_2:+8854972 Msa0394270:CDS
GTTCACCATTCAAAGAACAT+TGG 0.543197 3_2:+8855020 Msa0394270:CDS
ATGCAGTGCATGTTAACCAT+AGG 0.544066 3_2:+8853083 Msa0394270:CDS
TATCATAATAGATTCATTGT+GGG 0.549110 3_2:+8856041 Msa0394270:three_prime_UTR
ATGGTGAACACTGTAACAAT+AGG 0.551113 3_2:-8855006 None:intergenic
ATTGAAACAAAATCCAAGAT+GGG 0.551532 3_2:+8853184 Msa0394270:CDS
TGTCCAAGTGTTGGAGTAGG+TGG 0.561626 3_2:+8854775 Msa0394270:CDS
AAAGAGCCTATACCAGAAGC+TGG 0.561825 3_2:+8855381 Msa0394270:CDS
GAATTTGCTTGGATTCAGGC+TGG 0.564257 3_2:+8853416 Msa0394270:CDS
TGAATTTCTGATTCATGGGA+AGG 0.564377 3_2:-8853242 None:intergenic
ACATACAATATATGGTCAAG+TGG 0.568366 3_2:+8855538 Msa0394270:CDS
TAATGATAGCAATCAAGTAA+TGG 0.570307 3_2:+8855989 Msa0394270:three_prime_UTR
GTGCAGATTAGAGTGGTTAG+TGG 0.572020 3_2:+8853296 Msa0394270:CDS
TTAAGTTGTTAATTCAGGGG+AGG 0.578715 3_2:-8855842 None:intergenic
AAGGAAGAGAGAGTTAAACT+TGG 0.579262 3_2:-8855160 None:intergenic
AGTAGTAAAACATTAAGAGA+TGG 0.583925 3_2:+8852986 Msa0394270:exon
ACAGGTATATGTCCAAGTGT+TGG 0.585011 3_2:+8854766 Msa0394270:intron
GGTACCTTGGTAAGGAAACA+TGG 0.585139 3_2:+8854820 Msa0394270:CDS
AGTGGTGGCCATGATTATGA+AGG 0.592283 3_2:+8853314 Msa0394270:CDS
CTTATAATGGAACCTTATGG+TGG 0.592307 3_2:+8855453 Msa0394270:CDS
CTGAATCCAAGCAAATTCAT+CGG 0.598221 3_2:-8853411 None:intergenic
CATACAATATATGGTCAAGT+GGG 0.599349 3_2:+8855539 Msa0394270:CDS
GATTGGTGTGCAGATTAGAG+TGG 0.599674 3_2:+8853289 Msa0394270:CDS
TAATTAAGTTGTTAATTCAG+GGG 0.600580 3_2:-8855845 None:intergenic
GCAACAAGTATGACAATACA+AGG 0.601545 3_2:+8855691 Msa0394270:CDS
GTGAACACTGTAACAATAGG+TGG 0.602884 3_2:-8855003 None:intergenic
TACTCAGAAGCAAGTGTTTG+GGG 0.603811 3_2:+8855714 Msa0394270:CDS
CAACCAAGCTTCTTAATAGG+TGG 0.612241 3_2:+8855052 Msa0394270:CDS
GTAGGTGGTCACATCAGTGG+TGG 0.618588 3_2:+8854790 Msa0394270:CDS
ATATCATAATAGATTCATTG+TGG 0.623219 3_2:+8856040 Msa0394270:three_prime_UTR
GGAGTAGGTGGTCACATCAG+TGG 0.625864 3_2:+8854787 Msa0394270:CDS
TAGACCCGGGCGATAGCACG+GGG 0.626876 3_2:-8855954 None:intergenic
CAAGATTAATGTCGATCGAA+CGG 0.627262 3_2:-8853388 None:intergenic
ATATGTCCAAGTGTTGGAGT+AGG 0.632250 3_2:+8854772 Msa0394270:CDS
GCGAGAGACTAGTATATGCA+AGG 0.632795 3_2:-8855932 None:intergenic
GGTGGACAGGGTTTAAACCC+CGG 0.634140 3_2:+8855908 Msa0394270:three_prime_UTR
GCTCAAACTAATTACCTGCA+GGG 0.638432 3_2:-8853496 None:intergenic
CAGGGGAGGGAATTCAGAAG+AGG 0.643159 3_2:-8855828 None:intergenic
GAAGGTGTCATAATGAGAAG+AGG 0.648177 3_2:-8853224 None:intergenic
TAGACCATGTTTCCTTACCA+AGG 0.652475 3_2:-8854824 None:intergenic
TATTGCATACTCAATAGACC+CGG 0.653375 3_2:-8855968 None:intergenic
ATTGCATACTCAATAGACCC+GGG 0.678640 3_2:-8855967 None:intergenic
CAGATTAGAGTGGTTAGTGG+TGG 0.684127 3_2:+8853299 Msa0394270:CDS
CACTTGTGGATACAATAAGG+AGG 0.699246 3_2:-8853153 None:intergenic
ACTAGTATATGCAAGGTCCG+GGG 0.701018 3_2:-8855925 None:intergenic
ATTCAAAGAACATTGGAACA+AGG 0.701106 3_2:+8855027 Msa0394270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATAATAATTTAGTTTTTT+TGG + chr3_2:8854410-8854429 Msa0394270:intron 10.0%
!! TAAAAAAAAACTATAACAAA+CGG + chr3_2:8854582-8854601 Msa0394270:intron 10.0%
!!! ATAACAAGTGATATATTTTT+TGG - chr3_2:8852949-8852968 None:intergenic 15.0%
!! TTATATATGAAAAGCTTAAT+AGG - chr3_2:8853841-8853860 None:intergenic 15.0%
!! AACTTCAAAAATATCAATAA+TGG - chr3_2:8853872-8853891 None:intergenic 15.0%
!!! AAAAATTGATTTTTTGTTTG+AGG - chr3_2:8854503-8854522 None:intergenic 15.0%
!!! TTTTCTTAAAAAATAACCAA+CGG + chr3_2:8854656-8854675 Msa0394270:intron 15.0%
!! ATAAAAAAAAAAAAAACCGT+TGG - chr3_2:8854675-8854694 None:intergenic 15.0%
!!! TTAATTAAGTTGTTAATTCA+GGG - chr3_2:8855849-8855868 None:intergenic 15.0%
!!! AGCACTTATAATATTTATTT+TGG + chr3_2:8855868-8855887 Msa0394270:three_prime_UTR 15.0%
!!! ACTTATAATATTTATTTTGG+TGG + chr3_2:8855871-8855890 Msa0394270:three_prime_UTR 15.0%
!!! CTTATAATATTTATTTTGGT+GGG + chr3_2:8855872-8855891 Msa0394270:three_prime_UTR 15.0%
!!! TTATAATATTTATTTTGGTG+GGG + chr3_2:8855873-8855892 Msa0394270:three_prime_UTR 15.0%
!! TAAGGTCTATTTAATTAAAC+AGG + chr3_2:8853770-8853789 Msa0394270:intron 20.0%
!! TTATTTAGTAGCTGATATAT+TGG + chr3_2:8853926-8853945 Msa0394270:intron 20.0%
!! TAAATAATGAATTCTTACGA+AGG - chr3_2:8853962-8853981 None:intergenic 20.0%
!!! CATAAAATAGGCTTTTAAAT+AGG + chr3_2:8854065-8854084 Msa0394270:intron 20.0%
!!! ATCTAGTTTTGACTTTATTT+TGG + chr3_2:8854282-8854301 Msa0394270:intron 20.0%
!! AATTCTTGATAGAAAATCAA+TGG + chr3_2:8854894-8854913 Msa0394270:CDS 20.0%
!! ATTCTTGATAGAAAATCAAT+GGG + chr3_2:8854895-8854914 Msa0394270:CDS 20.0%
!!! TAATTAAGTTGTTAATTCAG+GGG - chr3_2:8855848-8855867 None:intergenic 20.0%
!!! CTTAATTAAGTTGTTAATTC+AGG - chr3_2:8855850-8855869 None:intergenic 20.0%
!!! TATAATATTTATTTTGGTGG+GGG + chr3_2:8855874-8855893 Msa0394270:three_prime_UTR 20.0%
!! ATATCATAATAGATTCATTG+TGG + chr3_2:8856040-8856059 Msa0394270:three_prime_UTR 20.0%
!! TATCATAATAGATTCATTGT+GGG + chr3_2:8856041-8856060 Msa0394270:three_prime_UTR 20.0%
!!! TATTTTTTGGTTCTAACAAG+TGG - chr3_2:8852936-8852955 None:intergenic 25.0%
!! CTTGTTATAACCAAAAAGTT+TGG + chr3_2:8852961-8852980 Msa0394270:five_prime_UTR 25.0%
!! TTACTACTTTCCAAACTTTT+TGG - chr3_2:8852974-8852993 None:intergenic 25.0%
! AGTAGTAAAACATTAAGAGA+TGG + chr3_2:8852986-8853005 Msa0394270:exon 25.0%
! ATTGAAACAAAATCCAAGAT+GGG + chr3_2:8853184-8853203 Msa0394270:CDS 25.0%
! ATGAGATCAATCATGATAAA+GGG - chr3_2:8853362-8853381 None:intergenic 25.0%
! CTAAATAACCAATCATATGA+AGG - chr3_2:8853914-8853933 None:intergenic 25.0%
!! CTTTAAGCCTTAATAAGTTT+TGG + chr3_2:8854002-8854021 Msa0394270:intron 25.0%
! AAATAGGCCAAAACTTATTA+AGG - chr3_2:8854012-8854031 None:intergenic 25.0%
!!! TAATAAGTTTTGGCCTATTT+AGG + chr3_2:8854012-8854031 Msa0394270:intron 25.0%
!! TAAAAGCCTATTTTATGCTA+AGG - chr3_2:8854062-8854081 None:intergenic 25.0%
! ATTAAATTGCTTATCCAAAC+AGG + chr3_2:8854748-8854767 Msa0394270:intron 25.0%
!! TTTTCCCATTTACATCTATA+AGG - chr3_2:8854876-8854895 None:intergenic 25.0%
!!! GTTTGGATTGTTTTTGAATT+TGG - chr3_2:8855141-8855160 None:intergenic 25.0%
!! TTAAGTTATCTTTTTCTCCA+AGG - chr3_2:8855182-8855201 None:intergenic 25.0%
! CACATTAGCATTACTTATAA+TGG + chr3_2:8855440-8855459 Msa0394270:CDS 25.0%
!! TTACTTATAATGGAACCTTA+TGG + chr3_2:8855450-8855469 Msa0394270:CDS 25.0%
! CTTGTACAACATACAATATA+TGG + chr3_2:8855530-8855549 Msa0394270:CDS 25.0%
! TAATGATAGCAATCAAGTAA+TGG + chr3_2:8855989-8856008 Msa0394270:three_prime_UTR 25.0%
!! AATTTAAAGTCATTGATAGC+AGG - chr3_2:8856111-8856130 None:intergenic 25.0%
CATTGAAACAAAATCCAAGA+TGG + chr3_2:8853183-8853202 Msa0394270:CDS 30.0%
TGCTTGAATTTCTGATTCAT+GGG - chr3_2:8853249-8853268 None:intergenic 30.0%
! AATCTTTTTGCTGCATAGTA+TGG - chr3_2:8853273-8853292 None:intergenic 30.0%
ATACTATGCAGCAAAAAGAT+TGG + chr3_2:8853272-8853291 Msa0394270:CDS 30.0%
GATGAGATCAATCATGATAA+AGG - chr3_2:8853363-8853382 None:intergenic 30.0%
! TCTAAAGCAAGTAAAGTTCA+TGG + chr3_2:8853470-8853489 Msa0394270:CDS 30.0%
!! ACTTATTTCTATAAGCTCTC+TGG + chr3_2:8853639-8853658 Msa0394270:intron 30.0%
TCTATTTAATTAAACAGGCC+AGG + chr3_2:8853775-8853794 Msa0394270:intron 30.0%
ATATGAAAAGCTTAATAGGC+CGG - chr3_2:8853837-8853856 None:intergenic 30.0%
AACAAAAGCCTTCATATGAT+TGG + chr3_2:8853903-8853922 Msa0394270:intron 30.0%
! TAGGCTTTTAAATAGGCTTT+CGG + chr3_2:8854072-8854091 Msa0394270:intron 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG + chr3_2:8854167-8854186 Msa0394270:intron 30.0%
TGGCCTACTTCAAAAATTAT+AGG - chr3_2:8854173-8854192 None:intergenic 30.0%
!!! TATAATTTTTGAAGTAGGCC+AGG + chr3_2:8854172-8854191 Msa0394270:intron 30.0%
CTCACCTTATAGATGTAAAT+GGG + chr3_2:8854869-8854888 Msa0394270:CDS 30.0%
!!! AATGGGAGAAGATGTTTTTT+GGG + chr3_2:8854912-8854931 Msa0394270:CDS 30.0%
TTGTTCCAATGTTCTTTGAA+TGG - chr3_2:8855028-8855047 None:intergenic 30.0%
ATTCAAAGAACATTGGAACA+AGG + chr3_2:8855027-8855046 Msa0394270:CDS 30.0%
AGAATAGTTGCTCAAAATAG+TGG + chr3_2:8855114-8855133 Msa0394270:CDS 30.0%
!! CAATCAGTTTTGTATTTTGC+AGG + chr3_2:8855273-8855292 Msa0394270:CDS 30.0%
TATTCAGCAAGAGTTCTATA+GGG - chr3_2:8855314-8855333 None:intergenic 30.0%
! CTCTTTTACATAGTCAGATT+TGG - chr3_2:8855367-8855386 None:intergenic 30.0%
! TTCCTTTTCTATGTGGAAAA+GGG - chr3_2:8855509-8855528 None:intergenic 30.0%
! TTTCCTTTTCTATGTGGAAA+AGG - chr3_2:8855510-8855529 None:intergenic 30.0%
! TACAAGTTTCCTTTTCTATG+TGG - chr3_2:8855516-8855535 None:intergenic 30.0%
ACATACAATATATGGTCAAG+TGG + chr3_2:8855538-8855557 Msa0394270:CDS 30.0%
CATACAATATATGGTCAAGT+GGG + chr3_2:8855539-8855558 Msa0394270:CDS 30.0%
AATCCAACAAGCATATAAAG+TGG + chr3_2:8855580-8855599 Msa0394270:CDS 30.0%
AGCTGCATATTACAACTATA+GGG + chr3_2:8855653-8855672 Msa0394270:CDS 30.0%
AACTATAGGGATCTTGATAT+AGG + chr3_2:8855666-8855685 Msa0394270:CDS 30.0%
! TCATTCCTGAAAAAGTTTTG+GGG - chr3_2:8855798-8855817 None:intergenic 30.0%
! CTCATTCCTGAAAAAGTTTT+GGG - chr3_2:8855799-8855818 None:intergenic 30.0%
AAAAAAATTGATGCAGGATG+AGG - chr3_2:8856071-8856090 None:intergenic 30.0%
!!! TCATCCTGCATCAATTTTTT+TGG + chr3_2:8856070-8856089 Msa0394270:three_prime_UTR 30.0%
CTATCCAAAAAAATTGATGC+AGG - chr3_2:8856077-8856096 None:intergenic 30.0%
!!! CTGCATCAATTTTTTTGGAT+AGG + chr3_2:8856075-8856094 Msa0394270:three_prime_UTR 30.0%
TTCAGAAAAGCTACTACCTA+TGG - chr3_2:8853102-8853121 None:intergenic 35.0%
! GATAAACACTGTGTTTTCAC+TGG - chr3_2:8853126-8853145 None:intergenic 35.0%
CAACACTTGTGGATACAATA+AGG - chr3_2:8853159-8853178 None:intergenic 35.0%
CTTATTGTATCCACAAGTGT+TGG + chr3_2:8853157-8853176 Msa0394270:CDS 35.0%
TTCAATGATTCCAACACTTG+TGG - chr3_2:8853170-8853189 None:intergenic 35.0%
TGAATTTCTGATTCATGGGA+AGG - chr3_2:8853245-8853264 None:intergenic 35.0%
CTGCTTGAATTTCTGATTCA+TGG - chr3_2:8853250-8853269 None:intergenic 35.0%
AAGACAGTCCTTCATAATCA+TGG - chr3_2:8853325-8853344 None:intergenic 35.0%
CAAGATTAATGTCGATCGAA+CGG - chr3_2:8853391-8853410 None:intergenic 35.0%
CTGAATCCAAGCAAATTCAT+CGG - chr3_2:8853414-8853433 None:intergenic 35.0%
ATTTCTATAAGCTCTCTGGT+AGG + chr3_2:8853643-8853662 Msa0394270:intron 35.0%
TTTCTATAAGCTCTCTGGTA+GGG + chr3_2:8853644-8853663 Msa0394270:intron 35.0%
!!! AGCTAGGTTTTAAATAGGCT+AGG - chr3_2:8853707-8853726 None:intergenic 35.0%
! AGCCTATTTAAAACCTAGCT+CGG + chr3_2:8853707-8853726 Msa0394270:intron 35.0%
CCTTATAAAAAGCTTGAGTC+TGG - chr3_2:8853755-8853774 None:intergenic 35.0%
! CCAGACTCAAGCTTTTTATA+AGG + chr3_2:8853752-8853771 Msa0394270:intron 35.0%
AAAAGTCTATTAAGCCCATC+AGG + chr3_2:8853811-8853830 Msa0394270:intron 35.0%
GTCAGACCTTAGCATAAAAT+AGG + chr3_2:8854053-8854072 Msa0394270:intron 35.0%
! AGGCTTTTAAATAGGCTTTC+GGG + chr3_2:8854073-8854092 Msa0394270:intron 35.0%
AAAAATTATAGGCCTGAGTC+TGG - chr3_2:8854162-8854181 None:intergenic 35.0%
TCATAAACTAACCAGAGAGT+AGG - chr3_2:8854241-8854260 None:intergenic 35.0%
GCTCACCTTATAGATGTAAA+TGG + chr3_2:8854868-8854887 Msa0394270:CDS 35.0%
!!! CAATGGGAGAAGATGTTTTT+TGG + chr3_2:8854911-8854930 Msa0394270:CDS 35.0%
!!! GATGTTTTTTGGGCTATTAG+AGG + chr3_2:8854922-8854941 Msa0394270:CDS 35.0%
!!! GTTTTGGAATCATTCTTGCA+TGG + chr3_2:8854959-8854978 Msa0394270:CDS 35.0%
TCATTCTTGCATGGAAGATA+AGG + chr3_2:8854968-8854987 Msa0394270:CDS 35.0%
ATGGTGAACACTGTAACAAT+AGG - chr3_2:8855009-8855028 None:intergenic 35.0%
GTTCACCATTCAAAGAACAT+TGG + chr3_2:8855020-8855039 Msa0394270:CDS 35.0%
CTTCATGCAATTTATCTGCT+AGG - chr3_2:8855083-8855102 None:intergenic 35.0%
AGAGAGAGTTAAACTTGGTT+TGG - chr3_2:8855158-8855177 None:intergenic 35.0%
AAGGAAGAGAGAGTTAAACT+TGG - chr3_2:8855163-8855182 None:intergenic 35.0%
AAGTTTAACTCTCTCTTCCT+TGG + chr3_2:8855162-8855181 Msa0394270:CDS 35.0%
AATGAGAGTTTCCCTGAATT+AGG + chr3_2:8855213-8855232 Msa0394270:CDS 35.0%
ATGAGAGTTTCCCTGAATTA+GGG + chr3_2:8855214-8855233 Msa0394270:CDS 35.0%
AAGACTGCATTGAAATGAGT+TGG + chr3_2:8855247-8855266 Msa0394270:CDS 35.0%
CTATTCAGCAAGAGTTCTAT+AGG - chr3_2:8855315-8855334 None:intergenic 35.0%
!! AAGCTGGTTTAGAAGGTATT+TGG + chr3_2:8855397-8855416 Msa0394270:CDS 35.0%
! CTTATAATGGAACCTTATGG+TGG + chr3_2:8855453-8855472 Msa0394270:CDS 35.0%
! ATCCCTTTTCCACATAGAAA+AGG + chr3_2:8855504-8855523 Msa0394270:CDS 35.0%
CATCCACTTTATATGCTTGT+TGG - chr3_2:8855586-8855605 None:intergenic 35.0%
AAGTGGATGAGAATGCTTTA+TGG + chr3_2:8855597-8855616 Msa0394270:CDS 35.0%
!! CTTGGAGACTTTGAAACATA+AGG - chr3_2:8855633-8855652 None:intergenic 35.0%
TAGTTGTAATATGCAGCTCT+TGG - chr3_2:8855651-8855670 None:intergenic 35.0%
GAGCTGCATATTACAACTAT+AGG + chr3_2:8855652-8855671 Msa0394270:CDS 35.0%
GCAACAAGTATGACAATACA+AGG + chr3_2:8855691-8855710 Msa0394270:CDS 35.0%
TAAGGGAAACTTTAAGCGAT+TGG + chr3_2:8855749-8855768 Msa0394270:CDS 35.0%
!! TTGATCCCCAAAACTTTTTC+AGG + chr3_2:8855790-8855809 Msa0394270:CDS 35.0%
! GCTCATTCCTGAAAAAGTTT+TGG - chr3_2:8855800-8855819 None:intergenic 35.0%
TAAGTTGTTAATTCAGGGGA+GGG - chr3_2:8855844-8855863 None:intergenic 35.0%
! TTAAGTTGTTAATTCAGGGG+AGG - chr3_2:8855845-8855864 None:intergenic 35.0%
TATTGCATACTCAATAGACC+CGG - chr3_2:8855971-8855990 None:intergenic 35.0%
ATGCAGTGCATGTTAACCAT+AGG + chr3_2:8853083-8853102 Msa0394270:CDS 40.0%
CACTTGTGGATACAATAAGG+AGG - chr3_2:8853156-8853175 None:intergenic 40.0%
CTTGATGAATTCACCCATCT+TGG - chr3_2:8853200-8853219 None:intergenic 40.0%
!! GAAGGTGTCATAATGAGAAG+AGG - chr3_2:8853227-8853246 None:intergenic 40.0%
! ATCTTGCCGATGAATTTGCT+TGG + chr3_2:8853405-8853424 Msa0394270:CDS 40.0%
! CGATGAATTTGCTTGGATTC+AGG + chr3_2:8853412-8853431 Msa0394270:CDS 40.0%
GCTCAAACTAATTACCTGCA+GGG - chr3_2:8853499-8853518 None:intergenic 40.0%
AGCTCAAACTAATTACCTGC+AGG - chr3_2:8853500-8853519 None:intergenic 40.0%
TTCTATAAGCTCTCTGGTAG+GGG + chr3_2:8853645-8853664 Msa0394270:intron 40.0%
! TTTTAAATAGGCTAGGCCGT+AGG - chr3_2:8853700-8853719 None:intergenic 40.0%
! GCCTTGTTAATAAACGAGCT+GGG - chr3_2:8853733-8853752 None:intergenic 40.0%
!!! CTTTTTTGCAAGTCTTAGCC+TGG - chr3_2:8853796-8853815 None:intergenic 40.0%
!! GTTTTGGCCTATTTAGGAGT+TGG + chr3_2:8854018-8854037 Msa0394270:intron 40.0%
ATGTAGGCCAACTCCTAAAT+AGG - chr3_2:8854028-8854047 None:intergenic 40.0%
TAAGGTCTGACAACACATGT+AGG - chr3_2:8854044-8854063 None:intergenic 40.0%
! GCTTCATCAGGCCTTTAAAA+AGG + chr3_2:8854095-8854114 Msa0394270:intron 40.0%
CCTCAAAAATGAGCCTATGA+CGG + chr3_2:8854128-8854147 Msa0394270:intron 40.0%
!! ATGAGCCTATGACGGATAAT+AGG + chr3_2:8854136-8854155 Msa0394270:intron 40.0%
CACTTGGACATATACCTGTT+TGG - chr3_2:8854765-8854784 None:intergenic 40.0%
ACAGGTATATGTCCAAGTGT+TGG + chr3_2:8854766-8854785 Msa0394270:intron 40.0%
!! ATATGTCCAAGTGTTGGAGT+AGG + chr3_2:8854772-8854791 Msa0394270:CDS 40.0%
TAGACCATGTTTCCTTACCA+AGG - chr3_2:8854827-8854846 None:intergenic 40.0%
!!! GTTTTTTGGGCTATTAGAGG+AGG + chr3_2:8854925-8854944 Msa0394270:CDS 40.0%
TCTTGCATGGAAGATAAGGT+TGG + chr3_2:8854972-8854991 Msa0394270:CDS 40.0%
GTGAACACTGTAACAATAGG+TGG - chr3_2:8855006-8855025 None:intergenic 40.0%
GAGCAACCAAGCTTCTTAAT+AGG + chr3_2:8855049-8855068 Msa0394270:CDS 40.0%
CAACCAAGCTTCTTAATAGG+TGG + chr3_2:8855052-8855071 Msa0394270:CDS 40.0%
TGTCTTGCAACCCTAATTCA+GGG - chr3_2:8855227-8855246 None:intergenic 40.0%
TTGTCTTGCAACCCTAATTC+AGG - chr3_2:8855228-8855247 None:intergenic 40.0%
!!! GGCTTTGAATGAGCTTTTGA+AGG - chr3_2:8855346-8855365 None:intergenic 40.0%
TCTAAACCAGCTTCTGGTAT+AGG - chr3_2:8855390-8855409 None:intergenic 40.0%
! ATACCAGAAGCTGGTTTAGA+AGG + chr3_2:8855390-8855409 Msa0394270:CDS 40.0%
ATACCTTCTAAACCAGCTTC+TGG - chr3_2:8855396-8855415 None:intergenic 40.0%
TCATTCAGTCTTCCACCATA+AGG - chr3_2:8855468-8855487 None:intergenic 40.0%
GTACTCAGAAGCAAGTGTTT+GGG + chr3_2:8855713-8855732 Msa0394270:CDS 40.0%
TACTCAGAAGCAAGTGTTTG+GGG + chr3_2:8855714-8855733 Msa0394270:CDS 40.0%
! TTGGGGCATCAAGTACTTTA+AGG + chr3_2:8855731-8855750 Msa0394270:CDS 40.0%
! TGGGGCATCAAGTACTTTAA+GGG + chr3_2:8855732-8855751 Msa0394270:CDS 40.0%
!! ATTTTGGTGGGGGACTATTT+TGG + chr3_2:8855884-8855903 Msa0394270:three_prime_UTR 40.0%
AGACTAGTATATGCAAGGTC+CGG - chr3_2:8855930-8855949 None:intergenic 40.0%
ATTGCATACTCAATAGACCC+GGG - chr3_2:8855970-8855989 None:intergenic 40.0%
GATTGGTGTGCAGATTAGAG+TGG + chr3_2:8853289-8853308 Msa0394270:CDS 45.0%
GTGCAGATTAGAGTGGTTAG+TGG + chr3_2:8853296-8853315 Msa0394270:CDS 45.0%
CAGATTAGAGTGGTTAGTGG+TGG + chr3_2:8853299-8853318 Msa0394270:CDS 45.0%
AGTGGTGGCCATGATTATGA+AGG + chr3_2:8853314-8853333 Msa0394270:CDS 45.0%
! GAATTTGCTTGGATTCAGGC+TGG + chr3_2:8853416-8853435 Msa0394270:CDS 45.0%
ATTCAGGCTGGTGCAACATT+AGG + chr3_2:8853428-8853447 Msa0394270:CDS 45.0%
AAAGTTCATGGATTCCCTGC+AGG + chr3_2:8853482-8853501 Msa0394270:CDS 45.0%
!!! GGCCGAGCTAGGTTTTAAAT+AGG - chr3_2:8853712-8853731 None:intergenic 45.0%
GCCCAGCTCGTTTATTAACA+AGG + chr3_2:8853729-8853748 Msa0394270:intron 45.0%
!! GGCCTTGTTAATAAACGAGC+TGG - chr3_2:8853734-8853753 None:intergenic 45.0%
! ATCAGGCCTTTAAAAAGGCC+AGG + chr3_2:8854100-8854119 Msa0394270:intron 45.0%
!!! ATAGGCTCATTTTTGAGGCC+TGG - chr3_2:8854126-8854145 None:intergenic 45.0%
!! CCGTCATAGGCTCATTTTTG+AGG - chr3_2:8854131-8854150 None:intergenic 45.0%
TCTGGCCTATTATCCGTCAT+AGG - chr3_2:8854144-8854163 None:intergenic 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+AGG + chr3_2:8854178-8854197 Msa0394270:intron 45.0%
CAGAGAGTAGGAGTGGAAAT+GGG - chr3_2:8854229-8854248 None:intergenic 45.0%
AACTAACCAGAGAGTAGGAG+TGG - chr3_2:8854236-8854255 None:intergenic 45.0%
GGTACCTTGGTAAGGAAACA+TGG + chr3_2:8854820-8854839 Msa0394270:CDS 45.0%
!! GGAGGTAGTGCTACTAGTTT+TGG + chr3_2:8854943-8854962 Msa0394270:CDS 45.0%
CTGCCACCTATTAAGAAGCT+TGG - chr3_2:8855058-8855077 None:intergenic 45.0%
AAAGAGCCTATACCAGAAGC+TGG + chr3_2:8855381-8855400 Msa0394270:CDS 45.0%
GGTACTCAGAAGCAAGTGTT+TGG + chr3_2:8855712-8855731 Msa0394270:CDS 45.0%
!!! GACTATTTTGGTGGTGGACA+GGG + chr3_2:8855896-8855915 Msa0394270:three_prime_UTR 45.0%
ACTAGTATATGCAAGGTCCG+GGG - chr3_2:8855928-8855947 None:intergenic 45.0%
GACTAGTATATGCAAGGTCC+GGG - chr3_2:8855929-8855948 None:intergenic 45.0%
GCGAGAGACTAGTATATGCA+AGG - chr3_2:8855935-8855954 None:intergenic 45.0%
TATAAGCTCTCTGGTAGGGG+TGG + chr3_2:8853648-8853667 Msa0394270:intron 50.0%
ATAAGCTCTCTGGTAGGGGT+GGG + chr3_2:8853649-8853668 Msa0394270:intron 50.0%
GTCTATTAAGCCCATCAGGC+CGG + chr3_2:8853815-8853834 Msa0394270:intron 50.0%
ATAGGCTTTCGGGCTTCATC+AGG + chr3_2:8854083-8854102 Msa0394270:intron 50.0%
ACGGATAATAGGCCAGACTC+AGG + chr3_2:8854147-8854166 Msa0394270:intron 50.0%
! AGTAGGAGTGGAAATGGGCT+AGG - chr3_2:8854224-8854243 None:intergenic 50.0%
CCAGAGAGTAGGAGTGGAAA+TGG - chr3_2:8854230-8854249 None:intergenic 50.0%
CCATTTCCACTCCTACTCTC+TGG + chr3_2:8854227-8854246 Msa0394270:intron 50.0%
!! TGTCCAAGTGTTGGAGTAGG+TGG + chr3_2:8854775-8854794 Msa0394270:CDS 50.0%
TGACCACCTACTCCAACACT+TGG - chr3_2:8854781-8854800 None:intergenic 50.0%
!! GTGGCTTTGGTACCTTGGTA+AGG + chr3_2:8854812-8854831 Msa0394270:CDS 50.0%
!! TTGGTGGGGGACTATTTTGG+TGG + chr3_2:8855887-8855906 Msa0394270:three_prime_UTR 50.0%
!!! GGACTATTTTGGTGGTGGAC+AGG + chr3_2:8855895-8855914 Msa0394270:three_prime_UTR 50.0%
TCTCTGGTAGGGGTGGGAAT+AGG + chr3_2:8853655-8853674 Msa0394270:intron 55.0%
GCTTAATAGGCCGGCCTGAT+GGG - chr3_2:8853828-8853847 None:intergenic 55.0%
AGCTTAATAGGCCGGCCTGA+TGG - chr3_2:8853829-8853848 None:intergenic 55.0%
! GCCTTTAAAAAGGCCAGGCC+AGG + chr3_2:8854105-8854124 Msa0394270:intron 55.0%
!! GCCTGGCCTGGCCTTTTTAA+AGG - chr3_2:8854109-8854128 None:intergenic 55.0%
!!! CTCATTTTTGAGGCCTGGCC+TGG - chr3_2:8854121-8854140 None:intergenic 55.0%
! GGCTTTGTAAGGCCTAAGCC+TGG - chr3_2:8854193-8854212 None:intergenic 55.0%
GGCTTAGGCCTTACAAAGCC+CGG + chr3_2:8854193-8854212 Msa0394270:intron 55.0%
GGAGTAGGTGGTCACATCAG+TGG + chr3_2:8854787-8854806 Msa0394270:CDS 55.0%
GTAGGTGGTCACATCAGTGG+TGG + chr3_2:8854790-8854809 Msa0394270:CDS 55.0%
!! CACATCAGTGGTGGTGGCTT+TGG + chr3_2:8854799-8854818 Msa0394270:CDS 55.0%
!! TGGTGGTGGCTTTGGTACCT+TGG + chr3_2:8854807-8854826 Msa0394270:CDS 55.0%
CAGGGGAGGGAATTCAGAAG+AGG - chr3_2:8855831-8855850 None:intergenic 55.0%
!!! GTGGGGGACTATTTTGGTGG+TGG + chr3_2:8855890-8855909 Msa0394270:three_prime_UTR 55.0%
GGTGGACAGGGTTTAAACCC+CGG + chr3_2:8855908-8855927 Msa0394270:three_prime_UTR 55.0%
AATAGACCCGGGCGATAGCA+CGG - chr3_2:8855959-8855978 None:intergenic 55.0%
TAAACGAGCTGGGCCGAGCT+AGG - chr3_2:8853723-8853742 None:intergenic 60.0%
!! GAGTGGAAATGGGCTAGGCC+GGG - chr3_2:8854219-8854238 None:intergenic 60.0%
!! GGAGTGGAAATGGGCTAGGC+CGG - chr3_2:8854220-8854239 None:intergenic 60.0%
GGTGGTCACATCAGTGGTGG+TGG + chr3_2:8854793-8854812 Msa0394270:CDS 60.0%
ATAGACCCGGGCGATAGCAC+GGG - chr3_2:8855958-8855977 None:intergenic 60.0%
GGTAGGGGTGGGAATAGGCC+AGG + chr3_2:8853660-8853679 Msa0394270:intron 65.0%
AATAGGCCAGGCCGACCGAC+AGG + chr3_2:8853672-8853691 Msa0394270:intron 65.0%
ATAGGCCAGGCCGACCGACA+GGG + chr3_2:8853673-8853692 Msa0394270:intron 65.0%
AGGCCTTACAAAGCCCGGCC+CGG + chr3_2:8854198-8854217 Msa0394270:intron 65.0%
TAGACCCGGGCGATAGCACG+GGG - chr3_2:8855957-8855976 None:intergenic 65.0%
TAGGCCAGGCCGACCGACAG+GGG + chr3_2:8853674-8853693 Msa0394270:intron 70.0%
GCTAGGCCGTAGGCCCCTGT+CGG - chr3_2:8853690-8853709 None:intergenic 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG - chr3_2:8854204-8854223 None:intergenic 70.0%
!! GAAATGGGCTAGGCCGGGCC+GGG - chr3_2:8854214-8854233 None:intergenic 70.0%
!! GGAAATGGGCTAGGCCGGGC+CGG - chr3_2:8854215-8854234 None:intergenic 70.0%
TCTCGCCCCGTGCTATCGCC+CGG + chr3_2:8855949-8855968 Msa0394270:three_prime_UTR 70.0%
TAGGCCCCTGTCGGTCGGCC+TGG - chr3_2:8853681-8853700 None:intergenic 75.0%
GGCCGACCGACAGGGGCCTA+CGG + chr3_2:8853681-8853700 Msa0394270:intron 75.0%
GGCCGTAGGCCCCTGTCGGT+CGG - chr3_2:8853686-8853705 None:intergenic 75.0%
CTCGCCCCGTGCTATCGCCC+GGG + chr3_2:8855950-8855969 Msa0394270:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 8852889 8856211 8852889 ID=Msa0394270;Name=Msa0394270
chr3_2 mRNA 8852889 8856211 8852889 ID=Msa0394270-mRNA-1;Parent=Msa0394270;Name=Msa0394270-mRNA-1;_AED=0.00;_eAED=0.00;_QI=116|1|1|1|1|1|2|360|526
chr3_2 exon 8852889 8853503 8852889 ID=Msa0394270-mRNA-1:exon:2269;Parent=Msa0394270-mRNA-1
chr3_2 exon 8854770 8856211 8854770 ID=Msa0394270-mRNA-1:exon:2270;Parent=Msa0394270-mRNA-1
chr3_2 five_prime_UTR 8852889 8853004 8852889 ID=Msa0394270-mRNA-1:five_prime_utr;Parent=Msa0394270-mRNA-1
chr3_2 CDS 8853005 8853503 8853005 ID=Msa0394270-mRNA-1:cds;Parent=Msa0394270-mRNA-1
chr3_2 CDS 8854770 8855851 8854770 ID=Msa0394270-mRNA-1:cds;Parent=Msa0394270-mRNA-1
chr3_2 three_prime_UTR 8855852 8856211 8855852 ID=Msa0394270-mRNA-1:three_prime_utr;Parent=Msa0394270-mRNA-1
Gene Sequence

>Msa0394270

ATGGCTTATCTTGCAGTGTTTCTGATTCTATCTCTTTCAATCTCTTGTGCTTCTTCTACTTCAGTTGAGAAAAGTTTCATGCAGTGCATGTTAACCATAGGTAGTAGCTTTTCTGAATCCAGTGAAAACACAGTGTTTATCAACTCATCCTCCTTATTGTATCCACAAGTGTTGGAATCATTGAAACAAAATCCAAGATGGGTGAATTCATCAAGCAAGCCTCTTCTCATTATGACACCTTCCCATGAATCAGAAATTCAAGCAGCCATACTATGCAGCAAAAAGATTGGTGTGCAGATTAGAGTGGTTAGTGGTGGCCATGATTATGAAGGACTGTCTTATCTTTGTAAGACACCCTTTATCATGATTGATCTCATCAACATCCGTTCGATCGACATTAATCTTGCCGATGAATTTGCTTGGATTCAGGCTGGTGCAACATTAGGTGAACTTTACTATAAAATCTCTAAAGCAAGTAAAGTTCATGGATTCCCTGCAGGTATATGTCCAAGTGTTGGAGTAGGTGGTCACATCAGTGGTGGTGGCTTTGGTACCTTGGTAAGGAAACATGGTCTAGCAGCAGATCATGTTGTTGATGCTCACCTTATAGATGTAAATGGGAAAATTCTTGATAGAAAATCAATGGGAGAAGATGTTTTTTGGGCTATTAGAGGAGGTAGTGCTACTAGTTTTGGAATCATTCTTGCATGGAAGATAAGGTTGGTTAGTGTTCCACCTATTGTTACAGTGTTCACCATTCAAAGAACATTGGAACAAGGAGCAACCAAGCTTCTTAATAGGTGGCAGTACCTAGCAGATAAATTGCATGAAGATCTTTTCATTAGAATAGTTGCTCAAAATAGTGGTCCAAATTCAAAAACAATCCAAACCAAGTTTAACTCTCTCTTCCTTGGAGAAAAAGATAACTTAATCAGAATAATGAATGAGAGTTTCCCTGAATTAGGGTTGCAAGACAAAGACTGCATTGAAATGAGTTGGATTCAATCAGTTTTGTATTTTGCAGGATTCAACAAAGATGACCCTATAGAACTCTTGCTGAATAGAATTGTAACCTTCAAAAGCTCATTCAAAGCCAAATCTGACTATGTAAAAGAGCCTATACCAGAAGCTGGTTTAGAAGGTATTTGGAGAATGCTTCTAAAAGAAGACACATTAGCATTACTTATAATGGAACCTTATGGTGGAAGACTGAATGAAATTTCAGAATCTGAAATCCCTTTTCCACATAGAAAAGGAAACTTGTACAACATACAATATATGGTCAAGTGGGAAATGAATAGCATTGAAGAATCCAACAAGCATATAAAGTGGATGAGAATGCTTTATGGATACATGACTCCTTATGTTTCAAAGTCTCCAAGAGCTGCATATTACAACTATAGGGATCTTGATATAGGTAGCAACAAGTATGACAATACAAGGTACTCAGAAGCAAGTGTTTGGGGCATCAAGTACTTTAAGGGAAACTTTAAGCGATTGGCACAAATTAAGACAAAATTTGATCCCCAAAACTTTTTCAGGAATGAGCAGAGCATTCCTCTTCTGAATTCCCTCCCCTGA
Protein sequence

>Msa0394270

MAYLAVFLILSLSISCASSTSVEKSFMQCMLTIGSSFSESSENTVFINSSSLLYPQVLESLKQNPRWVNSSSKPLLIMTPSHESEIQAAILCSKKIGVQIRVVSGGHDYEGLSYLCKTPFIMIDLINIRSIDINLADEFAWIQAGATLGELYYKISKASKVHGFPAGICPSVGVGGHISGGGFGTLVRKHGLAADHVVDAHLIDVNGKILDRKSMGEDVFWAIRGGSATSFGIILAWKIRLVSVPPIVTVFTIQRTLEQGATKLLNRWQYLADKLHEDLFIRIVAQNSGPNSKTIQTKFNSLFLGEKDNLIRIMNESFPELGLQDKDCIEMSWIQSVLYFAGFNKDDPIELLLNRIVTFKSSFKAKSDYVKEPIPEAGLEGIWRMLLKEDTLALLIMEPYGGRLNEISESEIPFPHRKGNLYNIQYMVKWEMNSIEESNKHIKWMRMLYGYMTPYVSKSPRAAYYNYRDLDIGSNKYDNTRYSEASVWGIKYFKGNFKRLAQIKTKFDPQNFFRNEQSIPLLNSLP*