AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0395850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0395850 MtrunA17_Chr3g0134091 78.049 410 43 5 1 363 36 445 0.0 640
Msa0395850 MtrunA17_Chr3g0134091 83.529 85 14 0 363 447 100 184 7.57e-42 155
Msa0395850 MtrunA17_Chr3g0134121 76.259 417 51 6 1 369 36 452 0.0 628
Msa0395850 MtrunA17_Chr3g0134121 62.016 129 38 1 363 491 101 218 5.42e-41 153
Msa0395850 MtrunA17_Chr3g0134101 79.310 406 42 7 1 369 53 453 0.0 613
Msa0395850 MtrunA17_Chr3g0134101 70.330 91 19 2 363 453 118 200 6.45e-30 121
Msa0395850 MtrunA17_Chr3g0134111 71.429 420 65 6 1 369 37 452 0.0 584
Msa0395850 MtrunA17_Chr3g0134111 79.545 88 18 0 363 450 97 184 7.91e-41 152
Msa0395850 MtrunA17_Chr3g0134041 61.779 416 109 6 1 369 37 449 2.65e-174 498
Msa0395850 MtrunA17_Chr3g0134041 77.922 77 17 0 371 447 107 183 1.53e-34 134
Msa0395850 MtrunA17_Chr3g0134061 60.187 427 112 6 1 369 35 461 1.04e-173 496
Msa0395850 MtrunA17_Chr3g0134061 67.059 85 21 1 372 449 110 194 3.32e-29 120
Msa0395850 MtrunA17_Chr3g0134071 60.432 417 112 7 1 365 37 452 2.04e-170 489
Msa0395850 MtrunA17_Chr3g0134071 77.500 80 18 0 370 449 110 189 2.65e-37 143
Msa0395850 MtrunA17_Chr3g0134131 52.339 342 52 6 1 321 36 287 4.30e-105 316
Msa0395850 MtrunA17_Chr3g0134131 85.000 80 12 0 368 447 51 130 4.63e-40 147
Msa0395850 MtrunA17_Chr4g0005941 37.554 466 181 12 1 368 34 487 4.21e-80 258
Msa0395850 MtrunA17_Chr4g0005941 46.914 81 39 3 371 447 94 174 1.29e-13 73.2
Msa0395850 MtrunA17_Chr5g0436621 36.876 461 182 12 1 364 34 482 9.54e-79 254
Msa0395850 MtrunA17_Chr5g0436621 44.872 78 42 1 371 447 95 172 6.07e-14 73.9
Msa0395850 MtrunA17_Chr3g0113181 37.104 442 193 12 1 368 40 470 2.44e-78 252
Msa0395850 MtrunA17_Chr3g0113181 44.872 78 42 1 371 447 100 177 4.72e-16 80.5
Msa0395850 MtrunA17_Chr4g0053111 37.799 418 197 13 2 364 35 444 2.79e-69 228
Msa0395850 MtrunA17_Chr4g0053111 50.649 77 37 1 371 446 107 183 5.51e-15 77.0
Msa0395850 MtrunA17_Chr8g0354371 36.453 406 207 10 7 368 43 441 4.64e-67 222
Msa0395850 MtrunA17_Chr8g0354371 44.156 77 42 1 371 446 102 178 1.20e-13 72.8
Msa0395850 MtrunA17_Chr8g0359251 36.029 408 210 10 6 368 41 442 6.07e-67 222
Msa0395850 MtrunA17_Chr8g0359251 49.351 77 38 1 371 446 102 178 1.69e-14 75.5
Msa0395850 MtrunA17_Chr4g0053091 35.627 407 206 9 8 373 45 436 3.27e-64 214
Msa0395850 MtrunA17_Chr4g0053091 42.857 77 43 1 371 446 110 186 3.80e-13 71.2
Msa0395850 MtrunA17_Chr4g0053081 34.709 412 199 11 8 364 46 442 4.53e-63 211
Msa0395850 MtrunA17_Chr4g0053081 43.590 78 43 1 371 447 105 182 4.75e-13 71.2
Msa0395850 MtrunA17_Chr3g0125001 36.585 410 197 12 8 368 38 433 5.45e-63 211
Msa0395850 MtrunA17_Chr3g0125001 48.052 77 39 1 371 446 93 169 4.16e-13 71.2
Msa0395850 MtrunA17_Chr4g0010361 35.407 418 202 13 7 368 37 442 1.51e-62 210
Msa0395850 MtrunA17_Chr4g0010361 49.351 77 38 1 371 446 93 169 1.83e-15 78.6
Msa0395850 MtrunA17_Chr4g0053061 35.461 423 198 14 8 369 71 479 9.72e-62 209
Msa0395850 MtrunA17_Chr4g0053061 41.000 100 54 2 353 447 104 203 3.86e-14 74.7
Msa0395850 MtrunA17_Chr7g0224131 35.577 416 200 13 7 368 37 438 2.13e-61 207
Msa0395850 MtrunA17_Chr7g0224131 50.000 78 38 1 371 447 93 170 7.15e-16 79.7
Msa0395850 MtrunA17_Chr4g0010381 35.337 416 203 13 7 368 37 440 2.53e-61 207
Msa0395850 MtrunA17_Chr4g0010381 46.753 77 40 1 371 446 93 169 1.39e-14 75.9
Msa0395850 MtrunA17_Chr8g0374911 35.225 423 199 15 8 369 64 472 4.90e-61 207
Msa0395850 MtrunA17_Chr8g0374911 40.000 100 55 2 353 447 97 196 6.21e-14 73.9
Msa0395850 MtrunA17_Chr4g0010331 36.496 411 200 13 7 368 37 435 2.70e-60 204
Msa0395850 MtrunA17_Chr4g0010331 53.247 77 35 1 371 446 93 169 2.09e-16 81.3
Msa0395850 MtrunA17_Chr4g0010121 34.351 393 193 11 8 347 83 463 1.99e-59 203
Msa0395850 MtrunA17_Chr4g0010121 39.394 99 55 2 353 446 116 214 3.32e-14 74.7
Msa0395850 MtrunA17_Chr4g0010311 35.000 420 200 12 7 368 37 441 2.38e-58 199
Msa0395850 MtrunA17_Chr4g0010311 49.351 77 38 1 371 446 93 169 5.75e-15 77.0
Msa0395850 MtrunA17_Chr3g0087221 34.597 422 202 12 9 368 39 448 5.32e-56 193
Msa0395850 MtrunA17_Chr3g0087221 44.156 77 42 1 371 446 93 169 1.59e-12 69.3
Msa0395850 MtrunA17_Chr8g0374641 35.000 400 186 13 8 349 43 426 1.71e-53 186
Msa0395850 MtrunA17_Chr8g0374641 40.404 99 54 2 353 446 76 174 4.84e-14 73.9
Msa0395850 MtrunA17_Chr6g0467861 30.612 441 222 12 2 367 76 507 5.04e-45 165
Msa0395850 MtrunA17_Chr4g0010351 32.927 328 164 10 7 287 37 355 2.97e-40 149
Msa0395850 MtrunA17_Chr4g0010351 45.918 98 46 2 357 447 73 170 2.78e-15 77.4
Msa0395850 MtrunA17_Chr8g0353901 35.407 209 110 5 179 363 20 227 1.17e-28 114
Msa0395850 MtrunA17_Chr7g0224121 41.611 149 67 3 7 144 39 178 2.73e-28 111
Msa0395850 MtrunA17_Chr7g0224121 51.351 74 35 1 374 446 98 171 1.60e-16 78.2
Msa0395850 MtrunA17_Chr4g0001861 25.990 404 231 13 13 358 34 427 8.74e-24 103
Msa0395850 MtrunA17_Chr8g0371821 26.053 380 215 14 33 358 56 423 2.45e-23 102
Msa0395850 MtrunA17_Chr2g0334001 24.688 401 239 14 13 358 34 426 6.27e-23 101
Msa0395850 MtrunA17_Chr4g0053071 38.158 152 81 4 230 373 1 147 1.98e-22 93.6
Msa0395850 MtrunA17_Chr4g0053051 39.394 132 71 3 245 368 1 131 1.24e-20 87.8
Msa0395850 MtrunA17_Chr6g0463331 41.026 117 56 2 44 147 45 161 3.36e-20 87.8
Msa0395850 MtrunA17_Chr6g0463331 47.436 78 40 1 371 447 75 152 8.12e-16 75.1
Msa0395850 MtrunA17_Chr8g0386141 28.053 303 174 10 27 289 53 351 3.86e-20 92.8
Msa0395850 MtrunA17_Chr6g0456591 36.986 146 78 3 12 144 46 190 3.87e-20 89.4
Msa0395850 MtrunA17_Chr6g0456591 44.156 77 42 1 371 446 107 183 9.00e-12 65.1
Msa0395850 MtrunA17_Chr3g0132001 26.829 328 195 12 33 318 66 390 5.71e-19 89.4
Msa0395850 MtrunA17_Chr8g0353891 36.242 149 78 4 7 144 40 182 1.27e-18 84.7
Msa0395850 MtrunA17_Chr2g0311401 24.830 294 175 8 109 358 5 296 2.10e-18 85.9
Msa0395850 MtrunA17_Chr1g0165671 25.113 442 234 20 1 370 47 463 6.59e-18 86.3
Msa0395850 MtrunA17_Chr6g0463321 33.333 165 84 4 179 335 38 184 9.70e-18 81.3
Msa0395850 MtrunA17_Chr4g0072041 24.289 387 211 16 33 349 70 444 8.21e-16 79.7
Msa0395850 MtrunA17_Chr3g0087401 22.901 393 226 14 27 349 48 433 1.17e-15 79.3
Msa0395850 MtrunA17_Chr5g0408911 25.952 420 237 20 1 363 46 448 3.92e-15 77.4
Msa0395850 MtrunA17_Chr7g0224101 33.333 123 60 3 158 258 13 135 9.89e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0395850 AT5G42830.1 52.029 419 146 8 1 369 37 450 2.36e-141 414
Msa0395850 AT5G42830.1 68.235 85 27 0 363 447 96 180 6.24e-31 125
Msa0395850 AT5G07860.1 50.852 411 158 7 1 367 38 448 5.28e-135 398
Msa0395850 AT5G07860.1 55.556 99 40 1 353 447 89 187 5.62e-26 110
Msa0395850 AT5G07850.1 50.721 416 157 7 1 368 38 453 1.01e-134 397
Msa0395850 AT5G07850.1 57.282 103 39 1 353 450 87 189 1.34e-28 118
Msa0395850 AT5G07870.1 48.113 424 164 6 1 368 38 461 2.92e-129 384
Msa0395850 AT5G07870.1 58.000 100 37 1 353 447 89 188 1.32e-29 121
Msa0395850 AT2G39980.1 38.210 458 180 11 1 368 36 480 7.30e-84 267
Msa0395850 AT2G39980.1 51.282 78 37 1 371 447 96 173 3.04e-19 90.9
Msa0395850 AT5G67150.1 37.857 420 200 13 2 369 37 447 1.02e-76 248
Msa0395850 AT5G67150.1 45.000 80 41 2 371 447 100 179 3.65e-14 75.1
Msa0395850 AT5G01210.1 38.170 448 185 12 1 368 34 469 1.58e-74 243
Msa0395850 AT5G01210.1 45.570 79 41 2 371 447 96 174 8.72e-15 77.0
Msa0395850 AT3G50270.1 34.123 422 217 11 1 369 36 449 1.24e-65 219
Msa0395850 AT3G50280.1 33.092 414 219 10 1 364 34 439 8.20e-59 201
Msa0395850 AT3G50280.1 46.250 80 41 2 371 448 98 177 3.12e-13 72.0
Msa0395850 AT5G67160.1 34.307 411 205 13 6 369 41 433 9.06e-55 189
Msa0395850 AT5G38130.1 33.333 408 196 12 1 350 54 443 9.37e-54 187
Msa0395850 AT5G38130.1 45.000 80 41 3 371 447 118 197 5.99e-11 65.1
Msa0395850 AT3G50300.1 33.170 407 200 12 1 350 34 425 1.47e-53 187
Msa0395850 AT3G50280.2 35.974 303 155 6 100 364 8 309 1.37e-46 164
Msa0395850 AT5G23940.1 30.841 428 223 11 2 366 33 450 3.75e-44 162
Msa0395850 AT3G50290.1 34.483 261 118 7 101 314 15 269 7.32e-35 132
Msa0395850 AT5G48930.1 25.547 411 233 18 5 358 33 427 6.62e-24 104
Msa0395850 AT2G19070.1 26.142 394 220 15 23 350 48 436 2.58e-22 99.8
Msa0395850 AT5G41040.2 27.976 336 194 12 27 317 63 395 2.53e-21 96.7
Msa0395850 AT5G41040.1 27.976 336 194 12 27 317 79 411 3.43e-21 96.7
Msa0395850 AT3G48720.1 28.231 294 159 12 9 260 42 325 3.91e-16 80.9
Msa0395850 AT2G40230.1 23.782 349 212 11 28 327 54 397 2.84e-12 68.9

Find 120 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTCCTAAGGAATATTT+TGG 0.093791 3_2:-13111262 Msa0395850:CDS
CAAAATGATATTCCTGTTTA+TGG 0.111562 3_2:-13111607 Msa0395850:intron
GAAGATTCTCTCTCTTAAAA+TGG 0.174060 3_2:+13105204 None:intergenic
AATACGTATGGAAATGAATT+TGG 0.183687 3_2:-13111022 Msa0395850:CDS
GTGGATAGGTTGATGTAAAA+TGG 0.241579 3_2:+13105315 None:intergenic
TTAAATGGAAGGTTGATAAT+TGG 0.249266 3_2:+13111532 None:intergenic
AACTCGTGGTGATGTTTAAA+TGG 0.296206 3_2:+13111517 None:intergenic
CCACTTATCATCACAGTATA+AGG 0.318537 3_2:+13111058 None:intergenic
CACGAGTTTGTTCACACATA+TGG 0.341216 3_2:-13111502 Msa0395850:CDS
ACGGGACCATAACCAGCTTC+TGG 0.369475 3_2:+13105280 None:intergenic
ATCAACCTATCCACAATAGA+TGG 0.377732 3_2:-13105306 Msa0395850:CDS
ACAATGGGTGGGACATCAAT+GGG 0.389297 3_2:+13111805 None:intergenic
TGGTTTCCAGAAGCTGGTTA+TGG 0.391179 3_2:-13105286 Msa0395850:CDS
TCTGTGATGGAACATCTTAT+TGG 0.391840 3_2:-13111660 Msa0395850:CDS
TCAGAGAACAACTTGCAAAA+TGG 0.392004 3_2:-13111314 Msa0395850:CDS
TTGGTGATGGAACAACTTAT+TGG 0.397503 3_2:-13105365 Msa0395850:CDS
ATCACCAATACAATGATTCA+TGG 0.399519 3_2:+13105380 None:intergenic
ACAATGGGTGGGACATCAAT+GGG 0.406020 3_2:+13105510 None:intergenic
GGATATGCTAACAAATTTGA+TGG 0.406437 3_2:-13110971 Msa0395850:CDS
CTCCCTCCTCCTTCTTGACC+TGG 0.408040 3_2:+13110932 None:intergenic
TTCCATTTCTATCCCCTCTC+AGG 0.415536 3_2:-13111952 Msa0395850:CDS
TTAAAATGGGTGTTTCATAT+CGG 0.416649 3_2:+13105218 None:intergenic
AACGACGGTAGGAGAGTTGC+TGG 0.419039 3_2:-13111212 Msa0395850:CDS
ATCTACACATTATAACCAAA+AGG 0.424756 3_2:-13112070 Msa0395850:CDS
ATTTGGAATGGGAAAAGCTT+TGG 0.427618 3_2:-13111005 Msa0395850:CDS
TGTGAAATGGGACCATAAAC+AGG 0.441469 3_2:+13111595 None:intergenic
ATCACAGAGACAATGATTCA+TGG 0.442497 3_2:+13111675 None:intergenic
TGCATGAATAAATTTAGCTC+CGG 0.444458 3_2:+13105566 None:intergenic
AATGGAAAAGCGTGAGGGAA+AGG 0.449937 3_2:+13111968 None:intergenic
TATTCAAGTCACGGAATTAG+TGG 0.453345 3_2:-13105424 Msa0395850:CDS
AGTATAAGAATGAGGATCTT+CGG 0.458409 3_2:+13111909 None:intergenic
TATGGAAATGAATTTGGAAT+GGG 0.460328 3_2:-13111016 Msa0395850:CDS
ATGGAAAAGCGTGAGGGAAA+GGG 0.461186 3_2:+13111969 None:intergenic
GGTTGATGTAAAATGGGAAC+AGG 0.461916 3_2:+13105322 None:intergenic
TGGATAGGTTGATGTAAAAT+GGG 0.464830 3_2:+13105316 None:intergenic
GGTTCTCTATGAAATGTTGT+TGG 0.465501 3_2:+13112013 None:intergenic
AACAATGGGTGGGACATCAA+TGG 0.465845 3_2:+13105509 None:intergenic
GACAATGGGTGGGACATCAA+TGG 0.465845 3_2:+13111804 None:intergenic
TCAAAGAACGATTGGACAAT+GGG 0.466912 3_2:+13111790 None:intergenic
GAGGTGGTTCCATTCTTGTT+CGG 0.467336 3_2:+13111281 None:intergenic
CCAAAATATTCCTTAGGAAG+AGG 0.467793 3_2:+13111262 None:intergenic
AAGATTCTCTCTCTTAAAAT+GGG 0.467841 3_2:+13105205 None:intergenic
ATGATAATAAAGTGGTGCTT+AGG 0.471109 3_2:-13111138 Msa0395850:CDS
TCAAAGAACGATTGAACAAT+GGG 0.472567 3_2:+13105495 None:intergenic
CACAAAGCAGTCAGCCATGA+TGG 0.473653 3_2:-13105468 Msa0395850:CDS
GGGGATGAGGATATCATTGA+TGG 0.474485 3_2:+13105530 None:intergenic
CAAGTCACAGAATTAGTAGA+TGG 0.474789 3_2:-13111715 Msa0395850:CDS
GAATTCCCAAAATATTCCTT+AGG 0.477642 3_2:+13111256 None:intergenic
GGAAAAGTAATTTCATATCC+AGG 0.482689 3_2:-13110950 Msa0395850:CDS
AACTCATCGTGATGTTTGAA+TGG 0.482751 3_2:+13105247 None:intergenic
AATAGATGGTTTCCAGAAGC+TGG 0.483452 3_2:-13105292 Msa0395850:CDS
GAGTTGCTGGAGAATGATCT+AGG 0.486265 3_2:-13111199 Msa0395850:CDS
TCACCGAGGTTTAATACGTA+TGG 0.489403 3_2:-13111034 Msa0395850:CDS
TTGAATGGAAGGTTGATAAC+GGG 0.502783 3_2:+13105262 None:intergenic
AGTGTTTCAGTTTGTCCACC+AGG 0.507243 3_2:+13111992 None:intergenic
TGTTGGTTTAGTAATGATGT+TGG 0.510991 3_2:+13112030 None:intergenic
CAATGGGTGGGACATCAATG+GGG 0.513002 3_2:+13111806 None:intergenic
TTTGAATGGAAGGTTGATAA+CGG 0.513374 3_2:+13105261 None:intergenic
TTTGTTATCTATTCAAGTCA+CGG 0.519202 3_2:-13105433 Msa0395850:CDS
TGTTCCATGAATCATTGTAT+TGG 0.519916 3_2:-13105384 Msa0395850:CDS
TGCAAATCATGATAATAAAG+TGG 0.522035 3_2:-13111146 Msa0395850:CDS
TGCTGGAGAATGATCTAGGA+TGG 0.522825 3_2:-13111195 Msa0395850:CDS
ACCTGAGAAAATGATGGTGC+TGG 0.523005 3_2:-13110885 Msa0395850:CDS
TACAAACAACCGAACAAGAA+TGG 0.524034 3_2:-13111290 Msa0395850:CDS
TGTCATGATCAAAGAACGAT+TGG 0.527909 3_2:+13111782 None:intergenic
GCATGAATAAATTTAGCTCC+GGG 0.529301 3_2:+13105567 None:intergenic
ATGAATCATTGTATTGGTGA+TGG 0.530598 3_2:-13105378 Msa0395850:CDS
GTATGGAAATGAATTTGGAA+TGG 0.534748 3_2:-13111017 Msa0395850:CDS
GTGGGACATCAATGGGGATG+AGG 0.534792 3_2:+13105517 None:intergenic
CCTTATACTGTGATGATAAG+TGG 0.535234 3_2:-13111058 Msa0395850:CDS
CATCGTGATGTTTGAATGGA+AGG 0.541756 3_2:+13105251 None:intergenic
AATGGAACCACCTCTTCCTA+AGG 0.542226 3_2:-13111272 Msa0395850:CDS
TGTAGTGAGTGCTGAAACGA+CGG 0.546049 3_2:-13111227 Msa0395850:CDS
TCTACACATTATAACCAAAA+GGG 0.546861 3_2:-13112069 Msa0395850:CDS
GGAAACCATCTATTGTGGAT+AGG 0.548035 3_2:+13105301 None:intergenic
CGTGGTGATGTTTAAATGGA+AGG 0.548108 3_2:+13111521 None:intergenic
AGTAACAAGACGACCTGAGA+GGG 0.549751 3_2:+13111939 None:intergenic
GACCTGAGAGGGGATAGAAA+TGG 0.554535 3_2:+13111950 None:intergenic
GTCAAAGAACGATTGAACAA+TGG 0.563728 3_2:+13105494 None:intergenic
AAAGCTTTGGCAGTTAGAAG+TGG 0.567341 3_2:-13110992 Msa0395850:CDS
AATGGGTGGGACATCAATGG+GGG 0.568371 3_2:+13111807 None:intergenic
ATGATCTAGGATGGGCAGCA+TGG 0.569534 3_2:-13111186 Msa0395850:CDS
ATCAAAGAACGATTGGACAA+TGG 0.570569 3_2:+13111789 None:intergenic
ACGAAAACAGTATAAGAATG+AGG 0.571532 3_2:+13111901 None:intergenic
CATGGCTGACTGCTTTGTGA+TGG 0.574372 3_2:+13105472 None:intergenic
GACAAAGCAGTCAACCATGA+TGG 0.574887 3_2:-13111763 Msa0395850:CDS
ATGAATCATTGTCTCTGTGA+TGG 0.575359 3_2:-13111673 Msa0395850:CDS
TGCTTAGGTCGGTTGAAGAG+TGG 0.577268 3_2:-13111123 Msa0395850:CDS
TATAGCGAAACTTAAAGCAA+AGG 0.578915 3_2:-13111434 Msa0395850:CDS
TATCCAGGTCAAGAAGGAGG+AGG 0.584517 3_2:-13110935 Msa0395850:CDS
ATTTCATATCCAGGTCAAGA+AGG 0.586316 3_2:-13110941 Msa0395850:CDS
GTTATAATGTGTAGATAACA+TGG 0.589863 3_2:+13112077 None:intergenic
CTTCTGGAAACCATCTATTG+TGG 0.590722 3_2:+13105296 None:intergenic
AAATATTCCTTAGGAAGAGG+TGG 0.594958 3_2:+13111265 None:intergenic
ATCCAGGTCAAGAAGGAGGA+GGG 0.602246 3_2:-13110934 Msa0395850:CDS
TTTCCATACGTATTAAACCT+CGG 0.609189 3_2:+13111031 None:intergenic
ACAACATTTCATAGAGAACC+TGG 0.610615 3_2:-13112010 Msa0395850:CDS
CAAGTCACGGAATTAGTGGA+TGG 0.611468 3_2:-13105420 Msa0395850:CDS
AAGAACGATTGGACAATGGG+TGG 0.614907 3_2:+13111793 None:intergenic
AGAACGATTGGACAATGGGT+GGG 0.617288 3_2:+13111794 None:intergenic
AAGAACGATTGAACAATGGG+TGG 0.618193 3_2:+13105498 None:intergenic
TAATAAAGTGGTGCTTAGGT+CGG 0.624945 3_2:-13111134 Msa0395850:CDS
GCTGGAGAATGATCTAGGAT+GGG 0.629384 3_2:-13111194 Msa0395850:CDS
AGAACGATTGAACAATGGGT+GGG 0.632199 3_2:+13105499 None:intergenic
AAGACATGGTGTGTCCATCA+TGG 0.634174 3_2:+13105454 None:intergenic
GATAGAAATGGAAAAGCGTG+AGG 0.641029 3_2:+13111962 None:intergenic
TCTTTCACCTGAGAAAATGA+TGG 0.654677 3_2:-13110891 Msa0395850:CDS
TCATATCCAGGTCAAGAAGG+AGG 0.656740 3_2:-13110938 Msa0395850:CDS
CAATGGGTGGGACATCAATG+GGG 0.662824 3_2:+13105511 None:intergenic
AAGACATGGTGTGACCATCA+TGG 0.667161 3_2:+13111749 None:intergenic
GGCAGCATGGAAAATTCATG+TGG 0.671300 3_2:-13111173 Msa0395850:CDS
GTGAGTGCTGAAACGACGGT+AGG 0.677302 3_2:-13111223 Msa0395850:CDS
ATAGAAATGGAAAAGCGTGA+GGG 0.687050 3_2:+13111963 None:intergenic
TAGTAACAAGACGACCTGAG+AGG 0.695039 3_2:+13111938 None:intergenic
TTGAATAGATAACAAAGACA+TGG 0.705301 3_2:+13105440 None:intergenic
TTGAATAGATAACAAAGACA+TGG 0.705301 3_2:+13111735 None:intergenic
GTAACAAGACGACCTGAGAG+GGG 0.714877 3_2:+13111940 None:intergenic
ACATTTCATAGAGAACCTGG+TGG 0.735789 3_2:-13112007 Msa0395850:CDS
TGATGATAAGTGGTTCACCG+AGG 0.741768 3_2:-13111048 Msa0395850:CDS
CATATGTGTGAACAAACTCG+TGG 0.754058 3_2:+13111503 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAAAAATTGCAA+TGG - chr3_2:13108243-13108262 Msa0395850:intron 10.0%
!!! ATTTTTTTACAAAATTTAGT+TGG - chr3_2:13108347-13108366 Msa0395850:intron 10.0%
!! GTACATAAAATATAATTTAT+AGG - chr3_2:13108578-13108597 Msa0395850:intron 10.0%
!!! ATCATCTTTTTTTTTTTTTT+AGG + chr3_2:13108936-13108955 None:intergenic 10.0%
!!! TTCATATTTTTTATTTTGAA+GGG + chr3_2:13110259-13110278 None:intergenic 10.0%
!!! ATTCATATTTTTTATTTTGA+AGG + chr3_2:13110260-13110279 None:intergenic 10.0%
!! ATGAATTTAGATTAAAAATT+AGG - chr3_2:13111209-13111228 Msa0395850:CDS 10.0%
!! TGAATTTAGATTAAAAATTA+GGG - chr3_2:13111210-13111229 Msa0395850:CDS 10.0%
!! AGTAAATAACAATAAAATAA+AGG - chr3_2:13111390-13111409 Msa0395850:CDS 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:13109391-13109410 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:13109391-13109410 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:13109391-13109410 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:13109391-13109410 None:intergenic 100.0%
!!! AGTGATTTTTATATAGATTT+AGG - chr3_2:13106547-13106566 Msa0395850:intron 15.0%
!!! TATTGTAAGTTTTTTTTAGA+GGG + chr3_2:13106971-13106990 None:intergenic 15.0%
!!! TTATTGTAAGTTTTTTTTAG+AGG + chr3_2:13106972-13106991 None:intergenic 15.0%
!! AAAACTTACAATAAACATTT+AGG - chr3_2:13106978-13106997 Msa0395850:intron 15.0%
!! AAACTTACAATAAACATTTA+GGG - chr3_2:13106979-13106998 Msa0395850:intron 15.0%
!!! CTAGTTTTTAAAACTAAAAA+AGG - chr3_2:13107115-13107134 Msa0395850:intron 15.0%
!!! AAGTTTTGCTTTTTAATTTT+TGG - chr3_2:13107152-13107171 Msa0395850:intron 15.0%
!!! TTTATTTGTTGATTTGTTTT+TGG + chr3_2:13107433-13107452 None:intergenic 15.0%
!! CAAAACTAATATTAAAATGT+AGG - chr3_2:13107510-13107529 Msa0395850:intron 15.0%
!!! AAGTGTTATTGTATAATTTA+TGG - chr3_2:13108037-13108056 Msa0395850:intron 15.0%
!!! AAGTGTTATTGTATAATTTA+TGG - chr3_2:13108037-13108056 Msa0395850:intron 15.0%
!! CATAAAATATAATTTATAGG+TGG - chr3_2:13108581-13108600 Msa0395850:intron 15.0%
!!! TTATTTTCTATAATCAAGTA+TGG - chr3_2:13109810-13109829 Msa0395850:intron 15.0%
!!! TGATTATGTTATTAGTTTTA+GGG + chr3_2:13109869-13109888 None:intergenic 15.0%
!! GAATATACTTGAATATATAA+TGG - chr3_2:13110276-13110295 Msa0395850:intron 15.0%
!!! AAGACATTTTTTGTTTTTTT+GGG + chr3_2:13110573-13110592 None:intergenic 15.0%
!!! AAAGACATTTTTTGTTTTTT+TGG + chr3_2:13110574-13110593 None:intergenic 15.0%
!!! ATATCTTTTTATTACTACAT+CGG + chr3_2:13110683-13110702 None:intergenic 15.0%
!! TTACATAAAATTAAGGTTTA+AGG - chr3_2:13111233-13111252 Msa0395850:CDS 15.0%
!!! AAGATTCTCTCTTTTAAAAT+GGG + chr3_2:13105821-13105840 None:intergenic 20.0%
!! AAATCTAATCGATACAAAAA+AGG + chr3_2:13106205-13106224 None:intergenic 20.0%
!! TATCCAAAACATGAATATTT+CGG - chr3_2:13106714-13106733 Msa0395850:intron 20.0%
!! AACATTGTATGTTATTAACT+TGG - chr3_2:13106773-13106792 Msa0395850:intron 20.0%
!! ACCAAATTGAATTCATTATT+TGG + chr3_2:13106920-13106939 None:intergenic 20.0%
!! TTAAAAACTAAAAAGCTGTT+TGG - chr3_2:13107047-13107066 Msa0395850:intron 20.0%
!!! TGCTTTTTAATTTTTGGTTT+TGG - chr3_2:13107158-13107177 Msa0395850:intron 20.0%
!! AATTTGCCATTAATGAAAAA+TGG + chr3_2:13107214-13107233 None:intergenic 20.0%
!!! TTTTTCCTTTCACAAAATAT+GGG + chr3_2:13107387-13107406 None:intergenic 20.0%
!!! TTTTTTCCTTTCACAAAATA+TGG + chr3_2:13107388-13107407 None:intergenic 20.0%
!!! TAAAATTTTTCTTCATAAGC+TGG - chr3_2:13107592-13107611 Msa0395850:intron 20.0%
!!! AAAATTTTTCTTCATAAGCT+GGG - chr3_2:13107593-13107612 Msa0395850:intron 20.0%
!!! AAAATTTCCATCACAATTTT+TGG + chr3_2:13107632-13107651 None:intergenic 20.0%
!!! AAATTGTGATGGAAATTTTT+TGG - chr3_2:13107633-13107652 Msa0395850:intron 20.0%
!!! AATTGTGATGGAAATTTTTT+GGG - chr3_2:13107634-13107653 Msa0395850:intron 20.0%
!!! TATTGAAGAATTTTTTTAGG+AGG - chr3_2:13107659-13107678 Msa0395850:intron 20.0%
!!! ACATAAAAGTATCCATTTTA+GGG + chr3_2:13107733-13107752 None:intergenic 20.0%
!!! AACATAAAAGTATCCATTTT+AGG + chr3_2:13107734-13107753 None:intergenic 20.0%
!! TCTTTAAATCATCACTAATT+TGG + chr3_2:13107863-13107882 None:intergenic 20.0%
!!! AAGCTTAATTTTATGATAGA+TGG + chr3_2:13108191-13108210 None:intergenic 20.0%
!!! TAAGCTTATTTTAATTGCAA+TGG - chr3_2:13108204-13108223 Msa0395850:intron 20.0%
!!! GCAATATCAATTTTTTTTCA+AGG + chr3_2:13108310-13108329 None:intergenic 20.0%
!! AGAAAGAAAAAAAATCTGTT+TGG + chr3_2:13108769-13108788 None:intergenic 20.0%
!!! AACTATTTTGAGACATATTT+TGG - chr3_2:13108964-13108983 Msa0395850:intron 20.0%
!!! AAAGTCATTTGAAACTTTAA+TGG + chr3_2:13109054-13109073 None:intergenic 20.0%
!! TTACATTGTATTTGTCTTAA+CGG - chr3_2:13109355-13109374 Msa0395850:intron 20.0%
!!! ATTTTTTTTGTGAAAACCAT+TGG - chr3_2:13109475-13109494 Msa0395850:intron 20.0%
!!! TTTTTTTTGTGAAAACCATT+GGG - chr3_2:13109476-13109495 Msa0395850:intron 20.0%
!! ATTATTCAATCAATGATAGT+AGG - chr3_2:13109514-13109533 Msa0395850:intron 20.0%
!!! CTGATTATGTTATTAGTTTT+AGG + chr3_2:13109870-13109889 None:intergenic 20.0%
!!! CAAATCTTTTTATTACTACA+TGG + chr3_2:13110217-13110236 None:intergenic 20.0%
!! AATGGAAAAAGAAAAAGAAA+AGG - chr3_2:13110294-13110313 Msa0395850:intron 20.0%
!! AAAAAATACGACATTCTAAT+TGG - chr3_2:13110371-13110390 Msa0395850:intron 20.0%
!!! AGACATTTTTTGTTTTTTTG+GGG + chr3_2:13110572-13110591 None:intergenic 20.0%
!!! AAAGTAAAATAAAAGAGCAT+TGG - chr3_2:13110808-13110827 Msa0395850:intron 20.0%
!!! AAGTAAAATAAAAGAGCATT+GGG - chr3_2:13110809-13110828 Msa0395850:intron 20.0%
!!! TCGTTTTATGAATTGATATT+TGG - chr3_2:13111111-13111130 Msa0395850:intron 20.0%
!!! CGTTTTATGAATTGATATTT+GGG - chr3_2:13111112-13111131 Msa0395850:intron 20.0%
!! ATTAGGGTTACATAAAATTA+AGG - chr3_2:13111226-13111245 Msa0395850:CDS 20.0%
! ATCTACACATTATAACCAAA+AGG - chr3_2:13105223-13105242 Msa0395850:CDS 25.0%
! TCTACACATTATAACCAAAA+GGG - chr3_2:13105224-13105243 Msa0395850:CDS 25.0%
! TTGAATAGATAACAAAGACA+TGG + chr3_2:13105561-13105580 None:intergenic 25.0%
! CAAAATGATATTCCTGTTTA+TGG - chr3_2:13105686-13105705 Msa0395850:intron 25.0%
!!! TTAAATGGAAGGTTGATAAT+TGG + chr3_2:13105764-13105783 None:intergenic 25.0%
!!! GAAGATTCTCTCTTTTAAAA+TGG + chr3_2:13105822-13105841 None:intergenic 25.0%
! AATCTTTATCAGCATTAGTT+TGG - chr3_2:13105921-13105940 Msa0395850:intron 25.0%
! TGCAAATCATGATAATAAAG+TGG - chr3_2:13106147-13106166 Msa0395850:intron 25.0%
! AATACGTATGGAAATGAATT+TGG - chr3_2:13106271-13106290 Msa0395850:intron 25.0%
!! TATGGAAATGAATTTGGAAT+GGG - chr3_2:13106277-13106296 Msa0395850:intron 25.0%
! ATAGTCAAAGATTAGAACAA+AGG + chr3_2:13106475-13106494 None:intergenic 25.0%
! TATGCTATAATGCTCTTTAA+TGG - chr3_2:13106492-13106511 Msa0395850:intron 25.0%
! TAAAATGAACACTGTAACAA+TGG + chr3_2:13106648-13106667 None:intergenic 25.0%
!! TTGTTACAGTGTTCATTTTA+TGG - chr3_2:13106648-13106667 Msa0395850:intron 25.0%
! GCCAAATAATGAATTCAATT+TGG - chr3_2:13106916-13106935 Msa0395850:intron 25.0%
!!! TTTGTTGATTTGTTTTTGGT+AGG + chr3_2:13107429-13107448 None:intergenic 25.0%
!!! ATTGTGATGGAAATTTTTTG+GGG - chr3_2:13107635-13107654 Msa0395850:intron 25.0%
!!! GGCTATTGAAGAATTTTTTT+AGG - chr3_2:13107656-13107675 Msa0395850:intron 25.0%
! TGATGATTTAAAGAACTTTG+AGG - chr3_2:13107869-13107888 Msa0395850:intron 25.0%
!!! TATTCATTGGCTTGTTAATT+TGG + chr3_2:13107985-13108004 None:intergenic 25.0%
! AACGTGAAAATGTTATTCAT+TGG + chr3_2:13107998-13108017 None:intergenic 25.0%
!! ATGAATAACATTTTCACGTT+TGG - chr3_2:13107998-13108017 Msa0395850:intron 25.0%
! ACGTTTGGAAAACAATATTA+TGG - chr3_2:13108013-13108032 Msa0395850:intron 25.0%
! AACGTGAAAATGTTATTCAT+TGG + chr3_2:13107998-13108017 None:intergenic 25.0%
!! ATGAATAACATTTTCACGTT+TGG - chr3_2:13107998-13108017 Msa0395850:intron 25.0%
! ACGTTTGGAAAACAATATTA+TGG - chr3_2:13108013-13108032 Msa0395850:intron 25.0%
!!! CAATGGTACTATATTTTGAT+GGG - chr3_2:13108260-13108279 Msa0395850:intron 25.0%
! AAAGTTTCAAATGACTTTGA+AGG - chr3_2:13109056-13109075 Msa0395850:intron 25.0%
! GTAGTTGGATTACTATATAA+TGG - chr3_2:13109080-13109099 Msa0395850:intron 25.0%
! GTTAAGACAAATACAATGTA+AGG + chr3_2:13109356-13109375 None:intergenic 25.0%
! ACACAGATGATATAGAAAAA+GGG + chr3_2:13109680-13109699 None:intergenic 25.0%
!! CACTGTTTCATCTAAAATAA+TGG - chr3_2:13109919-13109938 Msa0395850:intron 25.0%
!!! TAAATGTTTTTTGTTTCGAG+AGG - chr3_2:13110142-13110161 Msa0395850:intron 25.0%
!!! AAATGTTTTTTGTTTCGAGA+GGG - chr3_2:13110143-13110162 Msa0395850:intron 25.0%
!!! GAAAAAGAAAAGGTATTTGA+CGG - chr3_2:13110304-13110323 Msa0395850:intron 25.0%
! ATCCATTCAAATTAAAGTGA+CGG - chr3_2:13110416-13110435 Msa0395850:intron 25.0%
! AAATTCAATCCTCAAATCTA+CGG - chr3_2:13110491-13110510 Msa0395850:intron 25.0%
! TAAACTTTCAATCTAGTCAT+TGG + chr3_2:13110744-13110763 None:intergenic 25.0%
! GACTAGATTGAAAGTTTAAA+AGG - chr3_2:13110746-13110765 Msa0395850:intron 25.0%
! ATCAATTCATAAAACGAAAG+TGG + chr3_2:13111108-13111127 None:intergenic 25.0%
!! TAAAATTAAGGTTTAAGGCT+TGG - chr3_2:13111238-13111257 Msa0395850:CDS 25.0%
!! TAACATTCATCTTTTGTTCT+TGG + chr3_2:13111428-13111447 None:intergenic 25.0%
! AGATGAATGTTAATGATAGA+TGG - chr3_2:13111436-13111455 Msa0395850:CDS 25.0%
!! ATTTTACTGTATAGTTGCTT+AGG + chr3_2:13111496-13111515 None:intergenic 25.0%
! TTGAATAGATAACAAAGACA+TGG + chr3_2:13105561-13105580 None:intergenic 25.0%
!! TTTGTTATCTATTCAAGTCA+CGG - chr3_2:13105565-13105584 Msa0395850:CDS 25.0%
! TTAAAATGGGTGTTTCATAT+CGG + chr3_2:13112078-13112097 None:intergenic 25.0%
!! TGTTGGTTTAGTAATGATGT+TGG + chr3_2:13105266-13105285 None:intergenic 30.0%
AGTATAAGAATGAGGATCTT+CGG + chr3_2:13105387-13105406 None:intergenic 30.0%
ACGAAAACAGTATAAGAATG+AGG + chr3_2:13105395-13105414 None:intergenic 30.0%
! TGCATGAATAAATTTAGCTC+CGG + chr3_2:13105435-13105454 None:intergenic 30.0%
! TTAGTAGATGGTGTTTTCAT+TGG - chr3_2:13105590-13105609 Msa0395850:intron 30.0%
TATAGCGAAACTTAAAGCAA+AGG - chr3_2:13105859-13105878 Msa0395850:intron 30.0%
! CTCTTCCTAAGGAATATTTT+GGG - chr3_2:13106032-13106051 Msa0395850:intron 30.0%
GAATTCCCAAAATATTCCTT+AGG + chr3_2:13106040-13106059 None:intergenic 30.0%
ATGATAATAAAGTGGTGCTT+AGG - chr3_2:13106155-13106174 Msa0395850:intron 30.0%
TTTCCATACGTATTAAACCT+CGG + chr3_2:13106265-13106284 None:intergenic 30.0%
GTATGGAAATGAATTTGGAA+TGG - chr3_2:13106276-13106295 Msa0395850:intron 30.0%
GGATATGCTAACAAATTTGA+TGG - chr3_2:13106322-13106341 Msa0395850:intron 30.0%
GGAAAAGTAATTTCATATCC+AGG - chr3_2:13106343-13106362 Msa0395850:intron 30.0%
! TGACCGAAATATTCATGTTT+TGG + chr3_2:13106720-13106739 None:intergenic 30.0%
!!! AGTTTTTTTTAGAGGGAAAC+TGG + chr3_2:13106964-13106983 None:intergenic 30.0%
!!! AAGGTGCCATTTTTCATTAA+TGG - chr3_2:13107205-13107224 Msa0395850:intron 30.0%
AGCAAATATAAACAGAGTGT+AGG + chr3_2:13107257-13107276 None:intergenic 30.0%
ACACTCTGTTTATATTTGCT+CGG - chr3_2:13107257-13107276 Msa0395850:intron 30.0%
GTATGAACCAAAAATTGTGA+TGG - chr3_2:13107622-13107641 Msa0395850:intron 30.0%
! GAAAAGTTGGCATATTTCTA+TGG - chr3_2:13107690-13107709 Msa0395850:intron 30.0%
TAACGTATTTCACCCTAAAA+TGG - chr3_2:13107718-13107737 Msa0395850:intron 30.0%
!!! GGTTGTTTTTCATTGAAACA+TGG - chr3_2:13107808-13107827 Msa0395850:intron 30.0%
! TGTTTTTCATTGAAACATGG+TGG - chr3_2:13107811-13107830 Msa0395850:intron 30.0%
!!! AGAACTTTGAGGTATTTTCT+TGG - chr3_2:13107880-13107899 Msa0395850:intron 30.0%
!! GCAATGGTACTATATTTTGA+TGG - chr3_2:13108259-13108278 Msa0395850:intron 30.0%
! GAAGAATATCATCTCTCTTT+TGG + chr3_2:13108914-13108933 None:intergenic 30.0%
TTTACTCTTTCTCTCCTTAT+TGG - chr3_2:13109016-13109035 Msa0395850:intron 30.0%
!!! GACTTACTTTTTGAGAATGA+AGG + chr3_2:13109119-13109138 None:intergenic 30.0%
! TTTTCAAACCTTGCTAAAGT+TGG - chr3_2:13109315-13109334 Msa0395850:intron 30.0%
AATGATAGTAGGAAGATTGA+GGG - chr3_2:13109525-13109544 Msa0395850:intron 30.0%
! TTGTGTTACAAAACTCCTTT+TGG + chr3_2:13109567-13109586 None:intergenic 30.0%
!!! ACATTCCAAGACTATTTTTG+AGG - chr3_2:13109641-13109660 Msa0395850:intron 30.0%
GACACAGATGATATAGAAAA+AGG + chr3_2:13109681-13109700 None:intergenic 30.0%
!! TAGATTCATTTCTAGTCGAT+CGG + chr3_2:13109997-13110016 None:intergenic 30.0%
!!! TGTCAGCAAGCTATTTTTAT+TGG - chr3_2:13110613-13110632 Msa0395850:intron 30.0%
!! TAAAAGAGCATTGGGATTAT+TGG - chr3_2:13110817-13110836 Msa0395850:intron 30.0%
TCTAAAGACAAGTTTCTCTT+TGG - chr3_2:13110906-13110925 Msa0395850:CDS 30.0%
AAATGTTCTACAAGAAACCA+CGG - chr3_2:13111512-13111531 Msa0395850:CDS 30.0%
ACAGAAACAATGTAAGAATG+GGG + chr3_2:13111690-13111709 None:intergenic 30.0%
GACAGAAACAATGTAAGAAT+GGG + chr3_2:13111691-13111710 None:intergenic 30.0%
! TGCATGAATAAATTTAGCTC+CGG + chr3_2:13105435-13105454 None:intergenic 30.0%
TCAAAGAACGATTGAACAAT+GGG + chr3_2:13111801-13111820 None:intergenic 30.0%
TGTTCCATGAATCATTGTAT+TGG - chr3_2:13111909-13111928 Msa0395850:CDS 30.0%
ATCACCAATACAATGATTCA+TGG + chr3_2:13111916-13111935 None:intergenic 30.0%
! ATGAATCATTGTATTGGTGA+TGG - chr3_2:13111915-13111934 Msa0395850:CDS 30.0%
!! TGGATAGGTTGATGTAAAAT+GGG + chr3_2:13111980-13111999 None:intergenic 30.0%
!! TTTGAATGGAAGGTTGATAA+CGG + chr3_2:13112035-13112054 None:intergenic 30.0%
!! TTTTGAAGAGAAGTCCCTTT+TGG + chr3_2:13105241-13105260 None:intergenic 35.0%
GGTTCTCTATGAAATGTTGT+TGG + chr3_2:13105283-13105302 None:intergenic 35.0%
ACAACATTTCATAGAGAACC+TGG - chr3_2:13105283-13105302 Msa0395850:CDS 35.0%
! ATAGAAATGGAAAAGCGTGA+GGG + chr3_2:13105333-13105352 None:intergenic 35.0%
! GCATGAATAAATTTAGCTCC+GGG + chr3_2:13105434-13105453 None:intergenic 35.0%
TCAAAGAACGATTGGACAAT+GGG + chr3_2:13105506-13105525 None:intergenic 35.0%
ATCAAAGAACGATTGGACAA+TGG + chr3_2:13105507-13105526 None:intergenic 35.0%
TGTCATGATCAAAGAACGAT+TGG + chr3_2:13105514-13105533 None:intergenic 35.0%
CAAGTCACAGAATTAGTAGA+TGG - chr3_2:13105578-13105597 Msa0395850:intron 35.0%
ATCACAGAGACAATGATTCA+TGG + chr3_2:13105621-13105640 None:intergenic 35.0%
ATGAATCATTGTCTCTGTGA+TGG - chr3_2:13105620-13105639 Msa0395850:intron 35.0%
! TCTGTGATGGAACATCTTAT+TGG - chr3_2:13105633-13105652 Msa0395850:intron 35.0%
!! TGGATAGGTTGATGTGAAAT+GGG + chr3_2:13105713-13105732 None:intergenic 35.0%
ATCAACCTATCCACAATAGA+TGG - chr3_2:13105720-13105739 Msa0395850:intron 35.0%
ATAATTGGACCATAACCTTC+TGG + chr3_2:13105749-13105768 None:intergenic 35.0%
! AACTCGTGGTGATGTTTAAA+TGG + chr3_2:13105779-13105798 None:intergenic 35.0%
!! GAGAATCTTCCATTTTTCAG+CGG - chr3_2:13105832-13105851 Msa0395850:intron 35.0%
CTATAGATTCCGCTGAAAAA+TGG + chr3_2:13105844-13105863 None:intergenic 35.0%
TCAGAGAACAACTTGCAAAA+TGG - chr3_2:13105979-13105998 Msa0395850:intron 35.0%
TACAAACAACCGAACAAGAA+TGG - chr3_2:13106003-13106022 Msa0395850:intron 35.0%
AAATATTCCTTAGGAAGAGG+TGG + chr3_2:13106031-13106050 None:intergenic 35.0%
CCAAAATATTCCTTAGGAAG+AGG + chr3_2:13106034-13106053 None:intergenic 35.0%
! CCTCTTCCTAAGGAATATTT+TGG - chr3_2:13106031-13106050 Msa0395850:intron 35.0%
TAATAAAGTGGTGCTTAGGT+CGG - chr3_2:13106159-13106178 Msa0395850:intron 35.0%
CCACTTATCATCACAGTATA+AGG + chr3_2:13106238-13106257 None:intergenic 35.0%
CCTTATACTGTGATGATAAG+TGG - chr3_2:13106235-13106254 Msa0395850:intron 35.0%
! ATTTGGAATGGGAAAAGCTT+TGG - chr3_2:13106288-13106307 Msa0395850:intron 35.0%
ATTTCATATCCAGGTCAAGA+AGG - chr3_2:13106352-13106371 Msa0395850:intron 35.0%
TCTTTCACCTGAGAAAATGA+TGG - chr3_2:13106402-13106421 Msa0395850:intron 35.0%
!!! TGGTTTTGGAAACAGCAAAA+AGG - chr3_2:13107172-13107191 Msa0395850:intron 35.0%
!! TTTTGGAAACAGCAAAAAGG+CGG - chr3_2:13107175-13107194 Msa0395850:intron 35.0%
! TGACTCCCATATTTTGTGAA+AGG - chr3_2:13107379-13107398 Msa0395850:intron 35.0%
AGTGATCTGAAAACGATCAA+CGG - chr3_2:13107757-13107776 Msa0395850:intron 35.0%
TTATCACATCGTAACTTGGT+CGG + chr3_2:13107783-13107802 None:intergenic 35.0%
CACTTTATCACATCGTAACT+TGG + chr3_2:13107787-13107806 None:intergenic 35.0%
AGTTACGATGTGATAAAGTG+TGG - chr3_2:13107787-13107806 Msa0395850:intron 35.0%
GGATGTTGAAATGTCTTTGA+AGG + chr3_2:13107842-13107861 None:intergenic 35.0%
! ATTTTCTTGGAGCTCTCAAT+TGG - chr3_2:13107893-13107912 Msa0395850:intron 35.0%
! TTTTCTTGGAGCTCTCAATT+GGG - chr3_2:13107894-13107913 Msa0395850:intron 35.0%
ACATCAACAAGTCATGTTTG+AGG - chr3_2:13107930-13107949 Msa0395850:intron 35.0%
GAGGTGGATAACAATTAACA+AGG - chr3_2:13107949-13107968 Msa0395850:intron 35.0%
! AATGACTTTGAAGGTGTAGT+TGG - chr3_2:13109065-13109084 Msa0395850:intron 35.0%
!! CATGTTCTGAAAAGAGAGAT+AGG + chr3_2:13109150-13109169 None:intergenic 35.0%
AGAATCAGCATTAGAACACA+TGG + chr3_2:13109231-13109250 None:intergenic 35.0%
CATAACACACGATGAGAAAT+GGG + chr3_2:13109286-13109305 None:intergenic 35.0%
AGAAAGAACCAACTTTAGCA+AGG + chr3_2:13109326-13109345 None:intergenic 35.0%
! ATCCCACTTTGTGGATTAAA+CGG + chr3_2:13109442-13109461 None:intergenic 35.0%
AGACTATAGATTTCACCCAA+TGG + chr3_2:13109494-13109513 None:intergenic 35.0%
CAATGATAGTAGGAAGATTG+AGG - chr3_2:13109524-13109543 Msa0395850:intron 35.0%
! TGTTACAAAACTCCTTTTGG+AGG + chr3_2:13109564-13109583 None:intergenic 35.0%
AATACCTTTGTGTTTCCACT+TGG - chr3_2:13109586-13109605 Msa0395850:intron 35.0%
CACTACCTCAAAAATAGTCT+TGG + chr3_2:13109649-13109668 None:intergenic 35.0%
!!! CAAGACTATTTTTGAGGTAG+TGG - chr3_2:13109647-13109666 Msa0395850:intron 35.0%
!! AGATTCATTTCTAGTCGATC+GGG + chr3_2:13109996-13110015 None:intergenic 35.0%
TGTAATCGATTACCAGATCT+TGG - chr3_2:13110095-13110114 Msa0395850:intron 35.0%
!! AAGAAAAGGTATTTGACGGA+TGG - chr3_2:13110308-13110327 Msa0395850:intron 35.0%
ACATTCTAATTGGTTGAGAG+CGG - chr3_2:13110381-13110400 Msa0395850:intron 35.0%
!! TGCCGTCACTTTAATTTGAA+TGG + chr3_2:13110421-13110440 None:intergenic 35.0%
GATACAAACTCATTTGTGTG+TGG - chr3_2:13110442-13110461 Msa0395850:intron 35.0%
! TTTTCAGCTAGTGTTCTGAT+GGG - chr3_2:13110641-13110660 Msa0395850:intron 35.0%
TAAAAAGATATCGTTCCGAC+AGG - chr3_2:13110692-13110711 Msa0395850:intron 35.0%
AAAAAGATATCGTTCCGACA+GGG - chr3_2:13110693-13110712 Msa0395850:intron 35.0%
TTGAATTCATAACTCCCTGT+CGG + chr3_2:13110710-13110729 None:intergenic 35.0%
AGACAATCACCCATGAAAAT+AGG + chr3_2:13110983-13111002 None:intergenic 35.0%
! TTTTCATGGGTGATTGTCTT+TGG - chr3_2:13110984-13111003 Msa0395850:CDS 35.0%
!! CACATAAAGTTTCGAGTTCA+AGG + chr3_2:13111013-13111032 None:intergenic 35.0%
TCGAAACTTTATGTGTCTCA+AGG - chr3_2:13111018-13111037 Msa0395850:CDS 35.0%
CGAACAAGTGAATTTAGACA+AGG + chr3_2:13111073-13111092 None:intergenic 35.0%
TCGCTTCTACAGTTTGATAA+TGG - chr3_2:13111168-13111187 Msa0395850:CDS 35.0%
! GTTTAAGGCTTGGTTTGATT+AGG - chr3_2:13111248-13111267 Msa0395850:CDS 35.0%
AATGTTCTACAAGAAACCAC+GGG - chr3_2:13111513-13111532 Msa0395850:CDS 35.0%
! ATGGAAAAGTGTGAGAGAAA+GGG + chr3_2:13111622-13111641 None:intergenic 35.0%
! AATGGAAAAGTGTGAGAGAA+AGG + chr3_2:13111623-13111642 None:intergenic 35.0%
CAGAAACAATGTAAGAATGG+GGG + chr3_2:13111689-13111708 None:intergenic 35.0%
CGACAGAAACAATGTAAGAA+TGG + chr3_2:13111692-13111711 None:intergenic 35.0%
! GCATGAATAAATTTAGCTCC+GGG + chr3_2:13105434-13105453 None:intergenic 35.0%
GTCAAAGAACGATTGAACAA+TGG + chr3_2:13111802-13111821 None:intergenic 35.0%
TATTCAAGTCACGGAATTAG+TGG - chr3_2:13111869-13111888 Msa0395850:intron 35.0%
!! TTAGTGGATGGTGTTTTCAT+TGG - chr3_2:13111885-13111904 Msa0395850:intron 35.0%
!! TTGGTGATGGAACAACTTAT+TGG - chr3_2:13111928-13111947 Msa0395850:CDS 35.0%
!! GTGGATAGGTTGATGTAAAA+TGG + chr3_2:13111981-13112000 None:intergenic 35.0%
ATCAACCTATCCACAATAGA+TGG - chr3_2:13105720-13105739 Msa0395850:intron 35.0%
!! TTGAATGGAAGGTTGATAAC+GGG + chr3_2:13112034-13112053 None:intergenic 35.0%
AACTCATCGTGATGTTTGAA+TGG + chr3_2:13112049-13112068 None:intergenic 35.0%
ACATTTCATAGAGAACCTGG+TGG - chr3_2:13105286-13105305 Msa0395850:CDS 40.0%
! GATAGAAATGGAAAAGCGTG+AGG + chr3_2:13105334-13105353 None:intergenic 40.0%
TGTGAAATGGGACCATAAAC+AGG + chr3_2:13105701-13105720 None:intergenic 40.0%
!! GTGGATAGGTTGATGTGAAA+TGG + chr3_2:13105714-13105733 None:intergenic 40.0%
GGAAACCATCTATTGTGGAT+AGG + chr3_2:13105728-13105747 None:intergenic 40.0%
! CTTCTGGAAACCATCTATTG+TGG + chr3_2:13105733-13105752 None:intergenic 40.0%
CACAATAGATGGTTTCCAGA+AGG - chr3_2:13105731-13105750 Msa0395850:intron 40.0%
AGATGGTTTCCAGAAGGTTA+TGG - chr3_2:13105737-13105756 Msa0395850:intron 40.0%
! CGTGGTGATGTTTAAATGGA+AGG + chr3_2:13105775-13105794 None:intergenic 40.0%
CATATGTGTGAACAAACTCG+TGG + chr3_2:13105793-13105812 None:intergenic 40.0%
! CACGAGTTTGTTCACACATA+TGG - chr3_2:13105791-13105810 Msa0395850:intron 40.0%
TCACCGAGGTTTAATACGTA+TGG - chr3_2:13106259-13106278 Msa0395850:intron 40.0%
! AAAGCTTTGGCAGTTAGAAG+TGG - chr3_2:13106301-13106320 Msa0395850:intron 40.0%
GCACTGAAACAACGAAATCA+CGG + chr3_2:13106582-13106601 None:intergenic 40.0%
TCTCAATTGGGTGAAAGACT+TGG - chr3_2:13107906-13107925 Msa0395850:intron 40.0%
TCAACAAGTCATGTTTGAGG+TGG - chr3_2:13107933-13107952 Msa0395850:intron 40.0%
GGCTTCAAGCTAATCCAATA+AGG + chr3_2:13109033-13109052 None:intergenic 40.0%
ACTCCTTTCTTTCTCACACT+AGG - chr3_2:13109177-13109196 Msa0395850:intron 40.0%
TCACCTAGTGTGAGAAAGAA+AGG + chr3_2:13109183-13109202 None:intergenic 40.0%
ATGAGAAATGGGTGATAGGA+TGG + chr3_2:13109275-13109294 None:intergenic 40.0%
CCATAACACACGATGAGAAA+TGG + chr3_2:13109287-13109306 None:intergenic 40.0%
CCATTTCTCATCGTGTGTTA+TGG - chr3_2:13109284-13109303 Msa0395850:intron 40.0%
!!! TACAGGATTGGTTTTGGTGT+GGG + chr3_2:13109417-13109436 None:intergenic 40.0%
GATTAAACGGTGTACAGGAT+TGG + chr3_2:13109429-13109448 None:intergenic 40.0%
! TTGTGGATTAAACGGTGTAC+AGG + chr3_2:13109434-13109453 None:intergenic 40.0%
ACACCGTTTAATCCACAAAG+TGG - chr3_2:13109436-13109455 Msa0395850:intron 40.0%
CACCGTTTAATCCACAAAGT+GGG - chr3_2:13109437-13109456 Msa0395850:intron 40.0%
TCCACAAAGTGGGATAGTAA+AGG - chr3_2:13109447-13109466 Msa0395850:intron 40.0%
TCCTTTACTATCCCACTTTG+TGG + chr3_2:13109451-13109470 None:intergenic 40.0%
TAGGAAGATTGAGGGTTTGT+CGG - chr3_2:13109533-13109552 Msa0395850:intron 40.0%
TCCACTTGGAGGATATGTAA+TGG - chr3_2:13109600-13109619 Msa0395850:intron 40.0%
ACCATTACATATCCTCCAAG+TGG + chr3_2:13109604-13109623 None:intergenic 40.0%
GAAATGAATCTATGCGTCGA+AGG - chr3_2:13110005-13110024 Msa0395850:intron 40.0%
TCATCAGTTCTTCCAAGATC+TGG + chr3_2:13110110-13110129 None:intergenic 40.0%
TAGGCTTAACCGTAGATTTG+AGG + chr3_2:13110503-13110522 None:intergenic 40.0%
! GTTTTCAGCTAGTGTTCTGA+TGG - chr3_2:13110640-13110659 Msa0395850:intron 40.0%
!! GTTCTGATGGGTTAAACCTA+CGG - chr3_2:13110653-13110672 Msa0395850:intron 40.0%
TTACTACATCGGTAAACCGT+AGG + chr3_2:13110672-13110691 None:intergenic 40.0%
ATGAAAATAGGCGTGGTTGT+TGG + chr3_2:13110971-13110990 None:intergenic 40.0%
! AACAACCACGCCTATTTTCA+TGG - chr3_2:13110970-13110989 Msa0395850:CDS 40.0%
! ACAACCACGCCTATTTTCAT+GGG - chr3_2:13110971-13110990 Msa0395850:CDS 40.0%
TCAAACTGTAGAAGCGAAAG+TGG + chr3_2:13111165-13111184 None:intergenic 40.0%
TTCTCTTGTCTTGGGATTGT+TGG + chr3_2:13111293-13111312 None:intergenic 40.0%
GAGTAGACTTCTCTTGTCTT+GGG + chr3_2:13111301-13111320 None:intergenic 40.0%
TGAGTAGACTTCTCTTGTCT+TGG + chr3_2:13111302-13111321 None:intergenic 40.0%
!!! ATGGGGGTCTTTGGATTTTT+TGG + chr3_2:13111673-13111692 None:intergenic 40.0%
AATGTAAGAATGGGGGTCTT+TGG + chr3_2:13111682-13111701 None:intergenic 40.0%
AGAACGATTGAACAATGGGT+GGG + chr3_2:13111797-13111816 None:intergenic 40.0%
AAGAACGATTGAACAATGGG+TGG + chr3_2:13111798-13111817 None:intergenic 40.0%
! GGTTGATGTAAAATGGGAAC+AGG + chr3_2:13111974-13111993 None:intergenic 40.0%
GGAAACCATCTATTGTGGAT+AGG + chr3_2:13105728-13105747 None:intergenic 40.0%
! CTTCTGGAAACCATCTATTG+TGG + chr3_2:13105733-13105752 None:intergenic 40.0%
AATAGATGGTTTCCAGAAGC+TGG - chr3_2:13112001-13112020 Msa0395850:CDS 40.0%
CATCGTGATGTTTGAATGGA+AGG + chr3_2:13112045-13112064 None:intergenic 40.0%
AGTGTTTCAGTTTGTCCACC+AGG + chr3_2:13105304-13105323 None:intergenic 45.0%
! ATGGAAAAGCGTGAGGGAAA+GGG + chr3_2:13105327-13105346 None:intergenic 45.0%
! AATGGAAAAGCGTGAGGGAA+AGG + chr3_2:13105328-13105347 None:intergenic 45.0%
TTCCATTTCTATCCCCTCTC+AGG - chr3_2:13105341-13105360 Msa0395850:CDS 45.0%
AGTAACAAGACGACCTGAGA+GGG + chr3_2:13105357-13105376 None:intergenic 45.0%
TAGTAACAAGACGACCTGAG+AGG + chr3_2:13105358-13105377 None:intergenic 45.0%
GTCGATTGCAAAAACAGTCC+CGG - chr3_2:13105413-13105432 Msa0395850:CDS 45.0%
GGGGGTGAGGATATCATTTA+TGG + chr3_2:13105471-13105490 None:intergenic 45.0%
ACAATGGGTGGGACATCAAT+GGG + chr3_2:13105491-13105510 None:intergenic 45.0%
AGAACGATTGGACAATGGGT+GGG + chr3_2:13105502-13105521 None:intergenic 45.0%
AAGAACGATTGGACAATGGG+TGG + chr3_2:13105503-13105522 None:intergenic 45.0%
GACAAAGCAGTCAACCATGA+TGG - chr3_2:13105530-13105549 Msa0395850:CDS 45.0%
AAGACATGGTGTGACCATCA+TGG + chr3_2:13105547-13105566 None:intergenic 45.0%
GAGGTGGTTCCATTCTTGTT+CGG + chr3_2:13106015-13106034 None:intergenic 45.0%
AATGGAACCACCTCTTCCTA+AGG - chr3_2:13106021-13106040 Msa0395850:intron 45.0%
!! TGTAGTGAGTGCTGAAACGA+CGG - chr3_2:13106066-13106085 Msa0395850:intron 45.0%
GAGTTGCTGGAGAATGATCT+AGG - chr3_2:13106094-13106113 Msa0395850:intron 45.0%
TGCTGGAGAATGATCTAGGA+TGG - chr3_2:13106098-13106117 Msa0395850:intron 45.0%
! GCTGGAGAATGATCTAGGAT+GGG - chr3_2:13106099-13106118 Msa0395850:intron 45.0%
GGCAGCATGGAAAATTCATG+TGG - chr3_2:13106120-13106139 Msa0395850:intron 45.0%
TGATGATAAGTGGTTCACCG+AGG - chr3_2:13106245-13106264 Msa0395850:intron 45.0%
TCATATCCAGGTCAAGAAGG+AGG - chr3_2:13106355-13106374 Msa0395850:intron 45.0%
! ACCTGAGAAAATGATGGTGC+TGG - chr3_2:13106408-13106427 Msa0395850:intron 45.0%
! TCCAGCACCATCATTTTCTC+AGG + chr3_2:13106412-13106431 None:intergenic 45.0%
GGAGGACTAAGACGAAAAGT+TGG - chr3_2:13107677-13107696 Msa0395850:intron 45.0%
CACGATGAGAAATGGGTGAT+AGG + chr3_2:13109279-13109298 None:intergenic 45.0%
!!! ACAGGATTGGTTTTGGTGTG+GGG + chr3_2:13109416-13109435 None:intergenic 45.0%
!!! GTACAGGATTGGTTTTGGTG+TGG + chr3_2:13109418-13109437 None:intergenic 45.0%
!!! ACGGTGTACAGGATTGGTTT+TGG + chr3_2:13109423-13109442 None:intergenic 45.0%
TTGTCGGAACATCCTCCAAA+AGG - chr3_2:13109549-13109568 Msa0395850:intron 45.0%
ACCTTTGTGTTTCCACTTGG+AGG - chr3_2:13109589-13109608 Msa0395850:intron 45.0%
TCCTCCAAGTGGAAACACAA+AGG + chr3_2:13109593-13109612 None:intergenic 45.0%
GGAAGGTTGTCATATCTGTG+AGG + chr3_2:13110047-13110066 None:intergenic 45.0%
ATTCGTCATCGCTGATGAGA+AGG + chr3_2:13110068-13110087 None:intergenic 45.0%
TAATTGGTTGAGAGCGGTGA+TGG - chr3_2:13110387-13110406 Msa0395850:intron 45.0%
AAAATAGGCGTGGTTGTTGG+AGG + chr3_2:13110968-13110987 None:intergenic 45.0%
ATCACCCATGAAAATAGGCG+TGG + chr3_2:13110978-13110997 None:intergenic 45.0%
ACTGTAGAAGCGAAAGTGGA+GGG + chr3_2:13111161-13111180 None:intergenic 45.0%
AACTGTAGAAGCGAAAGTGG+AGG + chr3_2:13111162-13111181 None:intergenic 45.0%
! ACAAGAAACCACGGGCTTTT+CGG - chr3_2:13111521-13111540 Msa0395850:CDS 45.0%
ACATTTCATTGAGAGCCTCG+TGG - chr3_2:13111581-13111600 Msa0395850:intron 45.0%
! AGTGTTTGAGTTTGTCCACG+AGG + chr3_2:13111599-13111618 None:intergenic 45.0%
GATCTGAGAGGGGATGATAA+TGG + chr3_2:13111641-13111660 None:intergenic 45.0%
GTAACAAGACGATCTGAGAG+GGG + chr3_2:13111651-13111670 None:intergenic 45.0%
GGTAACAAGACGATCTGAGA+GGG + chr3_2:13111652-13111671 None:intergenic 45.0%
TGGTAACAAGACGATCTGAG+AGG + chr3_2:13111653-13111672 None:intergenic 45.0%
GTCGATTGCAAAAACAGTCC+CGG - chr3_2:13105413-13105432 Msa0395850:CDS 45.0%
GGGGATGAGGATATCATTGA+TGG + chr3_2:13111766-13111785 None:intergenic 45.0%
ACAATGGGTGGGACATCAAT+GGG + chr3_2:13105491-13105510 None:intergenic 45.0%
AACAATGGGTGGGACATCAA+TGG + chr3_2:13111787-13111806 None:intergenic 45.0%
AAGACATGGTGTGTCCATCA+TGG + chr3_2:13111842-13111861 None:intergenic 45.0%
CAAGTCACGGAATTAGTGGA+TGG - chr3_2:13111873-13111892 Msa0395850:intron 45.0%
TGGTTTCCAGAAGCTGGTTA+TGG - chr3_2:13112007-13112026 Msa0395850:CDS 45.0%
!!! AATTTTATTATATTTTTAGT+AGG - chr3_2:13106744-13106763 Msa0395850:intron 5.0%
!!! TTTCATTTAAATTTTATATT+TGG + chr3_2:13107488-13107507 None:intergenic 5.0%
!!! TAATAATAAGAATTTAAAAT+AGG + chr3_2:13110522-13110541 None:intergenic 5.0%
GACCTGAGAGGGGATAGAAA+TGG + chr3_2:13105346-13105365 None:intergenic 50.0%
GTAACAAGACGACCTGAGAG+GGG + chr3_2:13105356-13105375 None:intergenic 50.0%
AATGGGTGGGACATCAATGG+GGG + chr3_2:13105489-13105508 None:intergenic 50.0%
CAATGGGTGGGACATCAATG+GGG + chr3_2:13105490-13105509 None:intergenic 50.0%
GACAATGGGTGGGACATCAA+TGG + chr3_2:13105492-13105511 None:intergenic 50.0%
! TCATGCACGTCGACTACAAC+AGG - chr3_2:13105955-13105974 Msa0395850:intron 50.0%
! ATGATCTAGGATGGGCAGCA+TGG - chr3_2:13106107-13106126 Msa0395850:intron 50.0%
TGCTTAGGTCGGTTGAAGAG+TGG - chr3_2:13106170-13106189 Msa0395850:intron 50.0%
TATCCAGGTCAAGAAGGAGG+AGG - chr3_2:13106358-13106377 Msa0395850:intron 50.0%
ATCCAGGTCAAGAAGGAGGA+GGG - chr3_2:13106359-13106378 Msa0395850:intron 50.0%
GCAAAAAGGCGGACAAGACA+AGG - chr3_2:13107186-13107205 Msa0395850:intron 50.0%
!!! AGGATTGGTTTTGGTGTGGG+GGG + chr3_2:13109414-13109433 None:intergenic 50.0%
!!! CAGGATTGGTTTTGGTGTGG+GGG + chr3_2:13109415-13109434 None:intergenic 50.0%
TAGTCGATCGGGCAAGGTAA+TGG + chr3_2:13109985-13110004 None:intergenic 50.0%
!! CATTTCTAGTCGATCGGGCA+AGG + chr3_2:13109991-13110010 None:intergenic 50.0%
GTCATCGCTGATGAGAAGGA+AGG + chr3_2:13110064-13110083 None:intergenic 50.0%
CTCATCAGCGATGACGAATC+TGG - chr3_2:13110069-13110088 Msa0395850:intron 50.0%
AGACCGAAAGGAGATGTGGT+GGG + chr3_2:13110932-13110951 None:intergenic 50.0%
ACTGAGACCGAAAGGAGATG+TGG + chr3_2:13110936-13110955 None:intergenic 50.0%
ACACACTCACTGAGACCGAA+AGG + chr3_2:13110944-13110963 None:intergenic 50.0%
!!! TGTTTTGACCGAAAAGCCCG+TGG + chr3_2:13111532-13111551 None:intergenic 50.0%
! ACGGGCTTTTCGGTCAAAAC+AGG - chr3_2:13111531-13111550 Msa0395850:CDS 50.0%
CAATGGGTGGGACATCAATG+GGG + chr3_2:13105490-13105509 None:intergenic 50.0%
CATGGCTGACTGCTTTGTGA+TGG + chr3_2:13111824-13111843 None:intergenic 50.0%
CACAAAGCAGTCAGCCATGA+TGG - chr3_2:13111825-13111844 Msa0395850:CDS 50.0%
!! GTGAGTGCTGAAACGACGGT+AGG - chr3_2:13106070-13106089 Msa0395850:intron 55.0%
AACGACGGTAGGAGAGTTGC+TGG - chr3_2:13106081-13106100 Msa0395850:intron 55.0%
!!! ATTGGTTTTGGTGTGGGGGG+GGG + chr3_2:13109411-13109430 None:intergenic 55.0%
!!! GATTGGTTTTGGTGTGGGGG+GGG + chr3_2:13109412-13109431 None:intergenic 55.0%
!!! GGATTGGTTTTGGTGTGGGG+GGG + chr3_2:13109413-13109432 None:intergenic 55.0%
TGGCCCACCACATCTCCTTT+CGG - chr3_2:13110926-13110945 Msa0395850:CDS 55.0%
GAGACCGAAAGGAGATGTGG+TGG + chr3_2:13110933-13110952 None:intergenic 55.0%
GTGGGACATCAATGGGGATG+AGG + chr3_2:13111779-13111798 None:intergenic 55.0%
ACGGGACCATAACCAGCTTC+TGG + chr3_2:13112016-13112035 None:intergenic 55.0%
GTGGGACATCAATGGGGGTG+AGG + chr3_2:13105484-13105503 None:intergenic 60.0%
CTCCCTCCTCCTTCTTGACC+TGG + chr3_2:13106364-13106383 None:intergenic 60.0%
!!! TTGGTTTTGGTGTGGGGGGG+GGG + chr3_2:13109410-13109429 None:intergenic 60.0%
!!! TGGTTTTGGTGTGGGGGGGG+GGG + chr3_2:13109409-13109428 None:intergenic 65.0%
!! TTTTGGTGTGGGGGGGGGGG+GGG + chr3_2:13109406-13109425 None:intergenic 70.0%
!! GTTTTGGTGTGGGGGGGGGG+GGG + chr3_2:13109407-13109426 None:intergenic 70.0%
!! GGTTTTGGTGTGGGGGGGGG+GGG + chr3_2:13109408-13109427 None:intergenic 70.0%
! TTTGGTGTGGGGGGGGGGGG+GGG + chr3_2:13109405-13109424 None:intergenic 75.0%
! TTGGTGTGGGGGGGGGGGGG+GGG + chr3_2:13109404-13109423 None:intergenic 80.0%
! TGGTGTGGGGGGGGGGGGGG+GGG + chr3_2:13109403-13109422 None:intergenic 85.0%
! TGTGGGGGGGGGGGGGGGGG+GGG + chr3_2:13109400-13109419 None:intergenic 90.0%
! GTGTGGGGGGGGGGGGGGGG+GGG + chr3_2:13109401-13109420 None:intergenic 90.0%
! GGTGTGGGGGGGGGGGGGGG+GGG + chr3_2:13109402-13109421 None:intergenic 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:13109398-13109417 None:intergenic 95.0%
! GTGGGGGGGGGGGGGGGGGG+GGG + chr3_2:13109399-13109418 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 13105218 13112097 13105218 ID=Msa0395850;Name=Msa0395850
chr3_2 mRNA 13105218 13112097 13105218 ID=Msa0395850-mRNA-1;Parent=Msa0395850;Name=Msa0395850-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|0|0|6|0|492
chr3_2 exon 13111887 13112097 13111887 ID=Msa0395850-mRNA-1:exon:3056;Parent=Msa0395850-mRNA-1
chr3_2 exon 13111608 13111853 13111608 ID=Msa0395850-mRNA-1:exon:3055;Parent=Msa0395850-mRNA-1
chr3_2 exon 13111378 13111562 13111378 ID=Msa0395850-mRNA-1:exon:3054;Parent=Msa0395850-mRNA-1
chr3_2 exon 13111119 13111338 13111119 ID=Msa0395850-mRNA-1:exon:3053;Parent=Msa0395850-mRNA-1
chr3_2 exon 13110851 13111094 13110851 ID=Msa0395850-mRNA-1:exon:3052;Parent=Msa0395850-mRNA-1
chr3_2 exon 13105218 13105590 13105218 ID=Msa0395850-mRNA-1:exon:3051;Parent=Msa0395850-mRNA-1
chr3_2 CDS 13111887 13112097 13111887 ID=Msa0395850-mRNA-1:cds;Parent=Msa0395850-mRNA-1
chr3_2 CDS 13111608 13111853 13111608 ID=Msa0395850-mRNA-1:cds;Parent=Msa0395850-mRNA-1
chr3_2 CDS 13111378 13111562 13111378 ID=Msa0395850-mRNA-1:cds;Parent=Msa0395850-mRNA-1
chr3_2 CDS 13111119 13111338 13111119 ID=Msa0395850-mRNA-1:cds;Parent=Msa0395850-mRNA-1
chr3_2 CDS 13110851 13111094 13110851 ID=Msa0395850-mRNA-1:cds;Parent=Msa0395850-mRNA-1
chr3_2 CDS 13105218 13105590 13105218 ID=Msa0395850-mRNA-1:cds;Parent=Msa0395850-mRNA-1
Gene Sequence

>Msa0395850

ATGTTATCTACACATTATAACCAAAAGGGACTTCTCTTCAAAAAACCAACATCATTACTAAACCAACAACATTTCATAGAGAACCTGGTGGACAAACTGAAACACTCCCTTTCCCTCACGCTTTTCCATTTCTATCCCCTCTCAGGTCGTCTTGTTACTAAAAAATCCGAAGATCCTCATTCTTATACTGTTTTCGTCGATTGCAAAAACAATATCACCATAAATGATATCCTCACCCCCATTGATGTCCCACCCATTGTCCAATCGTTCTTTGATCATGACAAAGCAGTCAACCATGATGGTCACACCATGTCTTTGTTATCTATTCAAGTCACAGAATTAGTAGATGGTGTTTTCATTGGTTGTTCCATGAATCATTGTCTCTGTGATGGAACATCTTATTGGAATTTCTTCAACACATTTTCTGAGATATTTCAAAATGATATTCCTGTTTATGGTTATGGTCCAATTATCAACCTTCCATTTAAACATCACCACGAGTTTGTTCACACATATGGAATACCCATTTTAAAAGAGAGAATCTTCCATTTTTCAGCGGAATCTATAGCGAAACTTAAAGCAAAGGCAAATGCAGAGTCTAATACAAACAAAATTTCTTCGTTTCAATCTTTATCAGCATTAGATCAGAGAACAACTTGCAAAATGGCTACAAACAACCGAACAAGAATGGAACCACCTCTTCCTAAGGAATATTTTGGGAATTCAATTTATGTAGTGAGTGCTGAAACGACGGTAGGAGAGTTGCTGGAGAATGATCTAGGATGGGCAGCATGGAAAATTCATGTGGCTATTGCAAATCATGATAATAAAGTGGTGCTTAGGTCGGTTGAAGAGTGGTTTCATTTGTTTTTTGATCCTTATACTGTGATGATAAGTGGTTCACCGAGGTTTAATACGTATGGAAATGAATTTGGAATGGGAAAAGCTTTGGCAGTTAGAAGTGGATATGCTAACAAATTTGATGGAAAAGTAATTTCATATCCAGGTCAAGAAGGAGGAGGGAGCATAGATCTTGAAGTGTGTCTTTCACCTGAGAAAATGATGGTGCTGGAGACAGATGAAGAGTTCATGAACTCAGTTTCTGTTCCCGGAGCTAAATTTATTCATGCAACTTTAGATATTACCATCAATGATATCCTCATCCCCATTGATGTCCCACCCATTGTTCAATCGTTCTTTGACCATCACAAAGCAGTCAGCCATGATGGACACACCATGTCTTTGTTATCTATTCAAGTCACGGAATTAGTGGATGGTGTTTTCATTGGATGTTCCATGAATCATTGTATTGGTGATGGAACAACTTATTGGAATTTCTTCAAAATGATGTTCCTGTTCCCATTTTACATCAACCTATCCACAATAGATGGTTTCCAGAAGCTGGTTATGGTCCCGTTATCAACCTTCCATTCAAACATCACGATGAGTTTGTTCACCGATATGAAACACCCATTTTAA
Protein sequence

>Msa0395850

MLSTHYNQKGLLFKKPTSLLNQQHFIENLVDKLKHSLSLTLFHFYPLSGRLVTKKSEDPHSYTVFVDCKNNITINDILTPIDVPPIVQSFFDHDKAVNHDGHTMSLLSIQVTELVDGVFIGCSMNHCLCDGTSYWNFFNTFSEIFQNDIPVYGYGPIINLPFKHHHEFVHTYGIPILKERIFHFSAESIAKLKAKANAESNTNKISSFQSLSALDQRTTCKMATNNRTRMEPPLPKEYFGNSIYVVSAETTVGELLENDLGWAAWKIHVAIANHDNKVVLRSVEEWFHLFFDPYTVMISGSPRFNTYGNEFGMGKALAVRSGYANKFDGKVISYPGQEGGGSIDLEVCLSPEKMMVLETDEEFMNSVSVPGAKFIHATLDITINDILIPIDVPPIVQSFFDHHKAVSHDGHTMSLLSIQVTELVDGVFIGCSMNHCIGDGTTYWNFFKMMFLFPFYINLSTIDGFQKLVMVPLSTFHSNITMSLFTDMKHPF*