AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0411140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411140 MtrunA17_Chr3g0102321 89.711 311 31 1 1 311 1 310 0.0 506
Msa0411140 MtrunA17_Chr5g0446471 38.129 139 71 3 40 178 36 159 2.09e-18 83.2
Msa0411140 MtrunA17_Chr5g0446471 63.333 60 14 2 250 309 189 240 4.61e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 53 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATACTTCAGATTGAATT+AGG 0.217620 3_2:+53282211 Msa0411140:three_prime_UTR
GAGACTTTGTTGATTGAAAA+TGG 0.223638 3_2:-53282105 None:intergenic
CAACATAAAACTTGTAAATA+AGG 0.279905 3_2:-53282278 None:intergenic
AATTAGGAGTTGTCACATTT+AGG 0.282177 3_2:+53282227 Msa0411140:three_prime_UTR
GATACAAATCATAACCTAAA+TGG 0.283577 3_2:+53281804 Msa0411140:CDS
AGCTTGCTCCTTATGATTCT+CGG 0.296122 3_2:-53281481 None:intergenic
CAATCTGAAGTATTAACTAT+TGG 0.350015 3_2:-53282204 None:intergenic
AGGAAATCAATGTGTTGATA+AGG 0.357223 3_2:+53282247 Msa0411140:three_prime_UTR
TAATTGAGATTGATATTTCC+AGG 0.365048 3_2:+53282174 Msa0411140:CDS
ATGGATTCTGAAATGAAATC+TGG 0.372382 3_2:-53282086 None:intergenic
ACTTAAATTTGAATTCAGAT+TGG 0.426941 3_2:-53281220 None:intergenic
AATCTTGCTCAAGTTTAAGA+TGG 0.436917 3_2:-53282312 None:intergenic
ATTCTTCAGTTAAGTTAGAC+AGG 0.438891 3_2:-53282040 None:intergenic
AAGAATTGTGTACCAGAGAT+AGG 0.442240 3_2:-53281867 None:intergenic
CCTTTGATCTATCCTATCTC+TGG 0.442686 3_2:+53281855 Msa0411140:CDS
GTTAGAATATTCATTTCCAT+TGG 0.449339 3_2:+53281512 Msa0411140:CDS
AAAGTGGATACAAGAGCAAT+TGG 0.452836 3_2:-53281327 None:intergenic
AAAACTTGAGTAGTCATGAT+AGG 0.459860 3_2:+53281703 Msa0411140:CDS
TTGCTTCTTTCACTATCTGA+TGG 0.475800 3_2:-53281633 None:intergenic
GGATTTAATAACTGAGCATA+AGG 0.487445 3_2:+53281014 Msa0411140:five_prime_UTR
TCTGAAGTATTAACTATTGG+TGG 0.490104 3_2:-53282201 None:intergenic
TAAGATGGTACTCACTTCAC+AGG 0.491637 3_2:+53280992 Msa0411140:five_prime_UTR
CAAGTCAATGATCATGATGA+AGG 0.495173 3_2:+53281176 Msa0411140:exon
TTAACTATTGGTGGATCACC+TGG 0.499764 3_2:-53282192 None:intergenic
TGTTCAAGAAAAGTTGATGA+AGG 0.507893 3_2:+53281398 Msa0411140:CDS
TAGACAGGTTCCTGCTTGGA+AGG 0.517226 3_2:-53282025 None:intergenic
TGAAAATGCCGAGAATCATA+AGG 0.517745 3_2:+53281473 Msa0411140:CDS
TTTCTGCTTTCACAATCCAA+TGG 0.538507 3_2:-53281528 None:intergenic
TCATCTTGCTGCATATGCTC+AGG 0.539256 3_2:-53281588 None:intergenic
TTGTGAAAGCAGAAATCTCT+TGG 0.553992 3_2:+53281536 Msa0411140:CDS
TCGAAATCCACCTTCCAAGC+AGG 0.554573 3_2:+53282015 Msa0411140:CDS
CAATGATTATGACGATTATG+AGG 0.554659 3_2:+53281962 Msa0411140:CDS
ACAGGTTCCTGCTTGGAAGG+TGG 0.556120 3_2:-53282022 None:intergenic
GTATCACTAACATCTAATGA+TGG 0.563606 3_2:-53281432 None:intergenic
AAAATGTCAAGATAATAGAC+AGG 0.564173 3_2:-53282340 None:intergenic
AAATGTGACAATAAACAAAG+TGG 0.564759 3_2:-53281343 None:intergenic
AAGCAGAAATCTCTTGGTCG+TGG 0.571550 3_2:+53281542 Msa0411140:CDS
TTTAGTTGTGCATCAATCTG+TGG 0.579605 3_2:+53281128 Msa0411140:five_prime_UTR
TAACTGAGCATAAGGACAGA+AGG 0.581232 3_2:+53281022 Msa0411140:five_prime_UTR
GACTATGATAATCACAGTGA+AGG 0.587855 3_2:+53281762 Msa0411140:CDS
AAGTTAGACAGGTTCCTGCT+TGG 0.595503 3_2:-53282029 None:intergenic
TTATGACGATTATGAGGTGG+AGG 0.600863 3_2:+53281968 Msa0411140:CDS
CCAGAGATAGGATAGATCAA+AGG 0.603822 3_2:-53281855 None:intergenic
AGAAGCAATGGCTCAATCGT+CGG 0.613511 3_2:+53281648 Msa0411140:CDS
AGAAATGAATGATATGAATG+AGG 0.616633 3_2:+53282142 Msa0411140:CDS
AACCTAAATGGAAAAGAGAG+TGG 0.625108 3_2:+53281816 Msa0411140:CDS
TCAGATAGTGAAAGAAGCAA+TGG 0.628062 3_2:+53281636 Msa0411140:CDS
AAGATGGTACTCACTTCACA+GGG 0.646341 3_2:+53280993 Msa0411140:five_prime_UTR
TGATTATGACGATTATGAGG+TGG 0.661398 3_2:+53281965 Msa0411140:CDS
TGAGGTGGAGGACGACGACG+AGG 0.677291 3_2:+53281980 Msa0411140:CDS
GGTGGAGGACGACGACGAGG+AGG 0.690311 3_2:+53281983 Msa0411140:CDS
AGAATGCTGATAAACACCAA+AGG 0.692849 3_2:-53281100 None:intergenic
TCTGACACTGATGATGAAGA+CGG 0.726031 3_2:+53281732 Msa0411140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTGAAAAGAAAAATGAAA+AGG - chr3_2:53281277-53281296 None:intergenic 15.0%
!!! TTATTTACAAGTTTTATGTT+GGG + chr3_2:53282280-53282299 Msa0411140:three_prime_UTR 15.0%
!! AATTGAAAAGAAAAATGAAA+AGG - chr3_2:53281277-53281296 None:intergenic 15.0%
!!! TTATTTACAAGTTTTATGTT+GGG + chr3_2:53282280-53282299 Msa0411140:three_prime_UTR 15.0%
!!! TTTTGCTTAAAAGGTTATTA+TGG + chr3_2:53281060-53281079 Msa0411140:five_prime_UTR 20.0%
!! ACTTAAATTTGAATTCAGAT+TGG - chr3_2:53281223-53281242 None:intergenic 20.0%
!! GTCACATTTAAAAAGAAAAA+AGG + chr3_2:53281357-53281376 Msa0411140:CDS 20.0%
!! TTAATACTTCAGATTGAATT+AGG + chr3_2:53282211-53282230 Msa0411140:three_prime_UTR 20.0%
!! CAACATAAAACTTGTAAATA+AGG - chr3_2:53282281-53282300 None:intergenic 20.0%
!!! CTTATTTACAAGTTTTATGT+TGG + chr3_2:53282279-53282298 Msa0411140:three_prime_UTR 20.0%
!!! TTTTGCTTAAAAGGTTATTA+TGG + chr3_2:53281060-53281079 Msa0411140:five_prime_UTR 20.0%
!! ACTTAAATTTGAATTCAGAT+TGG - chr3_2:53281223-53281242 None:intergenic 20.0%
!! GTCACATTTAAAAAGAAAAA+AGG + chr3_2:53281357-53281376 Msa0411140:CDS 20.0%
!! TTAATACTTCAGATTGAATT+AGG + chr3_2:53282211-53282230 Msa0411140:three_prime_UTR 20.0%
!! CAACATAAAACTTGTAAATA+AGG - chr3_2:53282281-53282300 None:intergenic 20.0%
!!! CTTATTTACAAGTTTTATGT+TGG + chr3_2:53282279-53282298 Msa0411140:three_prime_UTR 20.0%
!!! GCAATTTCAAGATTTTAAGA+TGG + chr3_2:53280977-53280996 Msa0411140:five_prime_UTR 25.0%
!!! TTTGCAGTTTTTTGCTTAAA+AGG + chr3_2:53281051-53281070 Msa0411140:five_prime_UTR 25.0%
! AAATGTGACAATAAACAAAG+TGG - chr3_2:53281346-53281365 None:intergenic 25.0%
! GTTAGAATATTCATTTCCAT+TGG + chr3_2:53281512-53281531 Msa0411140:CDS 25.0%
! GATACAAATCATAACCTAAA+TGG + chr3_2:53281804-53281823 Msa0411140:CDS 25.0%
! TGAAGAATCTATGCAAAAAT+TGG + chr3_2:53282055-53282074 Msa0411140:CDS 25.0%
! AGAAATGAATGATATGAATG+AGG + chr3_2:53282142-53282161 Msa0411140:CDS 25.0%
! TAATTGAGATTGATATTTCC+AGG + chr3_2:53282174-53282193 Msa0411140:CDS 25.0%
!! CAATCTGAAGTATTAACTAT+TGG - chr3_2:53282207-53282226 None:intergenic 25.0%
! AAAATGTCAAGATAATAGAC+AGG - chr3_2:53282343-53282362 None:intergenic 25.0%
!!! CTTGACATTTTGATTCAAAA+AGG + chr3_2:53282352-53282371 Msa0411140:three_prime_UTR 25.0%
!!! GCAATTTCAAGATTTTAAGA+TGG + chr3_2:53280977-53280996 Msa0411140:five_prime_UTR 25.0%
!!! TTTGCAGTTTTTTGCTTAAA+AGG + chr3_2:53281051-53281070 Msa0411140:five_prime_UTR 25.0%
! AAATGTGACAATAAACAAAG+TGG - chr3_2:53281346-53281365 None:intergenic 25.0%
! GTTAGAATATTCATTTCCAT+TGG + chr3_2:53281512-53281531 Msa0411140:CDS 25.0%
! GATACAAATCATAACCTAAA+TGG + chr3_2:53281804-53281823 Msa0411140:CDS 25.0%
! TGAAGAATCTATGCAAAAAT+TGG + chr3_2:53282055-53282074 Msa0411140:CDS 25.0%
! AGAAATGAATGATATGAATG+AGG + chr3_2:53282142-53282161 Msa0411140:CDS 25.0%
! TAATTGAGATTGATATTTCC+AGG + chr3_2:53282174-53282193 Msa0411140:CDS 25.0%
!! CAATCTGAAGTATTAACTAT+TGG - chr3_2:53282207-53282226 None:intergenic 25.0%
! AAAATGTCAAGATAATAGAC+AGG - chr3_2:53282343-53282362 None:intergenic 25.0%
!!! CTTGACATTTTGATTCAAAA+AGG + chr3_2:53282352-53282371 Msa0411140:three_prime_UTR 25.0%
GGATTTAATAACTGAGCATA+AGG + chr3_2:53281014-53281033 Msa0411140:five_prime_UTR 30.0%
!! TGTTCAAGAAAAGTTGATGA+AGG + chr3_2:53281398-53281417 Msa0411140:CDS 30.0%
GTATCACTAACATCTAATGA+TGG - chr3_2:53281435-53281454 None:intergenic 30.0%
AAAACTTGAGTAGTCATGAT+AGG + chr3_2:53281703-53281722 Msa0411140:CDS 30.0%
TCATAATCATTGTCATCTGA+AGG - chr3_2:53281954-53281973 None:intergenic 30.0%
CAATGATTATGACGATTATG+AGG + chr3_2:53281962-53281981 Msa0411140:CDS 30.0%
ATTCTTCAGTTAAGTTAGAC+AGG - chr3_2:53282043-53282062 None:intergenic 30.0%
!! ATGGATTCTGAAATGAAATC+TGG - chr3_2:53282089-53282108 None:intergenic 30.0%
! GAGACTTTGTTGATTGAAAA+TGG - chr3_2:53282108-53282127 None:intergenic 30.0%
! TCTGAAGTATTAACTATTGG+TGG - chr3_2:53282204-53282223 None:intergenic 30.0%
AATTAGGAGTTGTCACATTT+AGG + chr3_2:53282227-53282246 Msa0411140:three_prime_UTR 30.0%
! AGGAAATCAATGTGTTGATA+AGG + chr3_2:53282247-53282266 Msa0411140:three_prime_UTR 30.0%
AATCTTGCTCAAGTTTAAGA+TGG - chr3_2:53282315-53282334 None:intergenic 30.0%
GGATTTAATAACTGAGCATA+AGG + chr3_2:53281014-53281033 Msa0411140:five_prime_UTR 30.0%
!! TGTTCAAGAAAAGTTGATGA+AGG + chr3_2:53281398-53281417 Msa0411140:CDS 30.0%
GTATCACTAACATCTAATGA+TGG - chr3_2:53281435-53281454 None:intergenic 30.0%
AAAACTTGAGTAGTCATGAT+AGG + chr3_2:53281703-53281722 Msa0411140:CDS 30.0%
TCATAATCATTGTCATCTGA+AGG - chr3_2:53281954-53281973 None:intergenic 30.0%
CAATGATTATGACGATTATG+AGG + chr3_2:53281962-53281981 Msa0411140:CDS 30.0%
ATTCTTCAGTTAAGTTAGAC+AGG - chr3_2:53282043-53282062 None:intergenic 30.0%
!! ATGGATTCTGAAATGAAATC+TGG - chr3_2:53282089-53282108 None:intergenic 30.0%
! GAGACTTTGTTGATTGAAAA+TGG - chr3_2:53282108-53282127 None:intergenic 30.0%
! TCTGAAGTATTAACTATTGG+TGG - chr3_2:53282204-53282223 None:intergenic 30.0%
AATTAGGAGTTGTCACATTT+AGG + chr3_2:53282227-53282246 Msa0411140:three_prime_UTR 30.0%
! AGGAAATCAATGTGTTGATA+AGG + chr3_2:53282247-53282266 Msa0411140:three_prime_UTR 30.0%
AATCTTGCTCAAGTTTAAGA+TGG - chr3_2:53282315-53282334 None:intergenic 30.0%
AGAATGCTGATAAACACCAA+AGG - chr3_2:53281103-53281122 None:intergenic 35.0%
TTTAGTTGTGCATCAATCTG+TGG + chr3_2:53281128-53281147 Msa0411140:five_prime_UTR 35.0%
CAAGTCAATGATCATGATGA+AGG + chr3_2:53281176-53281195 Msa0411140:exon 35.0%
AAAGTGGATACAAGAGCAAT+TGG - chr3_2:53281330-53281349 None:intergenic 35.0%
TGAAAATGCCGAGAATCATA+AGG + chr3_2:53281473-53281492 Msa0411140:CDS 35.0%
TTTCTGCTTTCACAATCCAA+TGG - chr3_2:53281531-53281550 None:intergenic 35.0%
TTGTGAAAGCAGAAATCTCT+TGG + chr3_2:53281536-53281555 Msa0411140:CDS 35.0%
TTGCTTCTTTCACTATCTGA+TGG - chr3_2:53281636-53281655 None:intergenic 35.0%
TCAGATAGTGAAAGAAGCAA+TGG + chr3_2:53281636-53281655 Msa0411140:CDS 35.0%
GACTATGATAATCACAGTGA+AGG + chr3_2:53281762-53281781 Msa0411140:CDS 35.0%
AACCTAAATGGAAAAGAGAG+TGG + chr3_2:53281816-53281835 Msa0411140:CDS 35.0%
! AACCACTCTCTTTTCCATTT+AGG - chr3_2:53281821-53281840 None:intergenic 35.0%
AAGAATTGTGTACCAGAGAT+AGG - chr3_2:53281870-53281889 None:intergenic 35.0%
TGATTATGACGATTATGAGG+TGG + chr3_2:53281965-53281984 Msa0411140:CDS 35.0%
CTATGCAAAAATTGGAAGTC+AGG + chr3_2:53282063-53282082 Msa0411140:CDS 35.0%
AGAATGCTGATAAACACCAA+AGG - chr3_2:53281103-53281122 None:intergenic 35.0%
TTTAGTTGTGCATCAATCTG+TGG + chr3_2:53281128-53281147 Msa0411140:five_prime_UTR 35.0%
CAAGTCAATGATCATGATGA+AGG + chr3_2:53281176-53281195 Msa0411140:exon 35.0%
AAAGTGGATACAAGAGCAAT+TGG - chr3_2:53281330-53281349 None:intergenic 35.0%
TGAAAATGCCGAGAATCATA+AGG + chr3_2:53281473-53281492 Msa0411140:CDS 35.0%
TTTCTGCTTTCACAATCCAA+TGG - chr3_2:53281531-53281550 None:intergenic 35.0%
TTGTGAAAGCAGAAATCTCT+TGG + chr3_2:53281536-53281555 Msa0411140:CDS 35.0%
TTGCTTCTTTCACTATCTGA+TGG - chr3_2:53281636-53281655 None:intergenic 35.0%
TCAGATAGTGAAAGAAGCAA+TGG + chr3_2:53281636-53281655 Msa0411140:CDS 35.0%
GACTATGATAATCACAGTGA+AGG + chr3_2:53281762-53281781 Msa0411140:CDS 35.0%
AACCTAAATGGAAAAGAGAG+TGG + chr3_2:53281816-53281835 Msa0411140:CDS 35.0%
! AACCACTCTCTTTTCCATTT+AGG - chr3_2:53281821-53281840 None:intergenic 35.0%
AAGAATTGTGTACCAGAGAT+AGG - chr3_2:53281870-53281889 None:intergenic 35.0%
TGATTATGACGATTATGAGG+TGG + chr3_2:53281965-53281984 Msa0411140:CDS 35.0%
CTATGCAAAAATTGGAAGTC+AGG + chr3_2:53282063-53282082 Msa0411140:CDS 35.0%
TAAGATGGTACTCACTTCAC+AGG + chr3_2:53280992-53281011 Msa0411140:five_prime_UTR 40.0%
AAGATGGTACTCACTTCACA+GGG + chr3_2:53280993-53281012 Msa0411140:five_prime_UTR 40.0%
TAACTGAGCATAAGGACAGA+AGG + chr3_2:53281022-53281041 Msa0411140:five_prime_UTR 40.0%
ACTCACTTCGCAAAAACCTT+TGG + chr3_2:53281084-53281103 Msa0411140:five_prime_UTR 40.0%
! AGCTTGCTCCTTATGATTCT+CGG - chr3_2:53281484-53281503 None:intergenic 40.0%
! TCTGACACTGATGATGAAGA+CGG + chr3_2:53281732-53281751 Msa0411140:CDS 40.0%
CCAGAGATAGGATAGATCAA+AGG - chr3_2:53281858-53281877 None:intergenic 40.0%
CCTTTGATCTATCCTATCTC+TGG + chr3_2:53281855-53281874 Msa0411140:CDS 40.0%
TTATGACGATTATGAGGTGG+AGG + chr3_2:53281968-53281987 Msa0411140:CDS 40.0%
! TTAACTATTGGTGGATCACC+TGG - chr3_2:53282195-53282214 None:intergenic 40.0%
TAAGATGGTACTCACTTCAC+AGG + chr3_2:53280992-53281011 Msa0411140:five_prime_UTR 40.0%
AAGATGGTACTCACTTCACA+GGG + chr3_2:53280993-53281012 Msa0411140:five_prime_UTR 40.0%
TAACTGAGCATAAGGACAGA+AGG + chr3_2:53281022-53281041 Msa0411140:five_prime_UTR 40.0%
ACTCACTTCGCAAAAACCTT+TGG + chr3_2:53281084-53281103 Msa0411140:five_prime_UTR 40.0%
! AGCTTGCTCCTTATGATTCT+CGG - chr3_2:53281484-53281503 None:intergenic 40.0%
! TCTGACACTGATGATGAAGA+CGG + chr3_2:53281732-53281751 Msa0411140:CDS 40.0%
CCAGAGATAGGATAGATCAA+AGG - chr3_2:53281858-53281877 None:intergenic 40.0%
CCTTTGATCTATCCTATCTC+TGG + chr3_2:53281855-53281874 Msa0411140:CDS 40.0%
TTATGACGATTATGAGGTGG+AGG + chr3_2:53281968-53281987 Msa0411140:CDS 40.0%
! TTAACTATTGGTGGATCACC+TGG - chr3_2:53282195-53282214 None:intergenic 40.0%
AAGCAGAAATCTCTTGGTCG+TGG + chr3_2:53281542-53281561 Msa0411140:CDS 45.0%
TCATCTTGCTGCATATGCTC+AGG - chr3_2:53281591-53281610 None:intergenic 45.0%
AGAAGCAATGGCTCAATCGT+CGG + chr3_2:53281648-53281667 Msa0411140:CDS 45.0%
AAGTTAGACAGGTTCCTGCT+TGG - chr3_2:53282032-53282051 None:intergenic 45.0%
AAGCAGAAATCTCTTGGTCG+TGG + chr3_2:53281542-53281561 Msa0411140:CDS 45.0%
TCATCTTGCTGCATATGCTC+AGG - chr3_2:53281591-53281610 None:intergenic 45.0%
AGAAGCAATGGCTCAATCGT+CGG + chr3_2:53281648-53281667 Msa0411140:CDS 45.0%
AAGTTAGACAGGTTCCTGCT+TGG - chr3_2:53282032-53282051 None:intergenic 45.0%
TCGAAATCCACCTTCCAAGC+AGG + chr3_2:53282015-53282034 Msa0411140:CDS 50.0%
TAGACAGGTTCCTGCTTGGA+AGG - chr3_2:53282028-53282047 None:intergenic 50.0%
TCGAAATCCACCTTCCAAGC+AGG + chr3_2:53282015-53282034 Msa0411140:CDS 50.0%
TAGACAGGTTCCTGCTTGGA+AGG - chr3_2:53282028-53282047 None:intergenic 50.0%
ACAGGTTCCTGCTTGGAAGG+TGG - chr3_2:53282025-53282044 None:intergenic 55.0%
ACAGGTTCCTGCTTGGAAGG+TGG - chr3_2:53282025-53282044 None:intergenic 55.0%
TGAGGTGGAGGACGACGACG+AGG + chr3_2:53281980-53281999 Msa0411140:CDS 65.0%
TGAGGTGGAGGACGACGACG+AGG + chr3_2:53281980-53281999 Msa0411140:CDS 65.0%
GGTGGAGGACGACGACGAGG+AGG + chr3_2:53281983-53282002 Msa0411140:CDS 70.0%
GGTGGAGGACGACGACGAGG+AGG + chr3_2:53281983-53282002 Msa0411140:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 53280943 53282378 53280943 ID=Msa0411140;Name=Msa0411140
chr3_2 mRNA 53280943 53282378 53280943 ID=Msa0411140-mRNA-1;Parent=Msa0411140;Name=Msa0411140-mRNA-1;_AED=0.03;_eAED=0.03;_QI=240|1|1|1|1|1|2|179|311
chr3_2 exon 53280943 53281876 53280943 ID=Msa0411140-mRNA-1:exon:10568;Parent=Msa0411140-mRNA-1
chr3_2 exon 53281958 53282378 53281958 ID=Msa0411140-mRNA-1:exon:10569;Parent=Msa0411140-mRNA-1
chr3_2 five_prime_UTR 53280943 53281182 53280943 ID=Msa0411140-mRNA-1:five_prime_utr;Parent=Msa0411140-mRNA-1
chr3_2 CDS 53281183 53281876 53281183 ID=Msa0411140-mRNA-1:cds;Parent=Msa0411140-mRNA-1
chr3_2 CDS 53281958 53282199 53281958 ID=Msa0411140-mRNA-1:cds;Parent=Msa0411140-mRNA-1
chr3_2 three_prime_UTR 53282200 53282378 53282200 ID=Msa0411140-mRNA-1:three_prime_utr;Parent=Msa0411140-mRNA-1
Gene Sequence

>Msa0411140

ATGATCATGATGAAGGCAAACAAGCAACATTTCTGTTCCAATCTGAATTCAAATTTAAGTACTTTTCTGACTATCATGCTGATTCTTGTCTCCTTTTCATTTTTCTTTTCAATTTCTAGATACTTCTCTTTTCTTCTTGCAATACCAATTGCTCTTGTATCCACTTTGTTTATTGTCACATTTAAAAAGAAAAAAGGATCTAAAAATGAAAGTGTTGTTCAAGAAAAGTTGATGAAGGAGAAGCTACAACCATCATTAGATGTTAGTGATACTGAATTTGATATACAAAGTGAAAATGCCGAGAATCATAAGGAGCAAGCTGAAGCACAGTTAGAATATTCATTTCCATTGGATTGTGAAAGCAGAAATCTCTTGGTCGTGGATAGAACTTTTGAGTTCAGTGTTCCTGAGCATATGCAGCAAGATGATTTGCGATCAGATTCTACGTTTCCATCAGATAGTGAAAGAAGCAATGGCTCAATCGTCGGCGAAACTTTTGAGTTTGATCACAATAGATATCAAAACTTGAGTAGTCATGATAGGTTAGTTTCTGACACTGATGATGAAGACGGTGAATATGACTATGATAATCACAGTGAAGGATTTAACAGAATTATCATAGATACAAATCATAACCTAAATGGAAAAGAGAGTGGTTTACTCTCATACTCTCCTTTGATCTATCCTATCTCTGATGACAATGATTATGACGATTATGAGGTGGAGGACGACGACGAGGAGGATAACTTGATCGAAATCCACCTTCCAAGCAGGAACCTGTCTAACTTAACTGAAGAATCTATGCAAAAATTGGAAGTCAGGCCAGATTTCATTTCAGAATCCATTTTCAATCAACAAAGTCTCATGCAGCTTTTAGCAGAAATGAATGATATGAATGAGGATGAAAACTTAATTGAGATTGATATTTCCAGGTGA
Protein sequence

>Msa0411140

MIMMKANKQHFCSNLNSNLSTFLTIMLILVSFSFFFSISRYFSFLLAIPIALVSTLFIVTFKKKKGSKNESVVQEKLMKEKLQPSLDVSDTEFDIQSENAENHKEQAEAQLEYSFPLDCESRNLLVVDRTFEFSVPEHMQQDDLRSDSTFPSDSERSNGSIVGETFEFDHNRYQNLSSHDRLVSDTDDEDGEYDYDNHSEGFNRIIIDTNHNLNGKESGLLSYSPLIYPISDDNDYDDYEVEDDDEEDNLIEIHLPSRNLSNLTEESMQKLEVRPDFISESIFNQQSLMQLLAEMNDMNEDENLIEIDISR*